Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0626710 | AES86511.1 | 98.227 | 564 | 10 | 0 | 1 | 564 | 1 | 564 | 0.0 | 1135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0626710 | sp|P0C897|Y3264_ARATH | 46.857 | 525 | 238 | 8 | 9 | 528 | 9 | 497 | 2.22e-163 | 478 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0626710 | G7JFQ2 | 98.227 | 564 | 10 | 0 | 1 | 564 | 1 | 564 | 0.0 | 1135 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0072180 | Msa0626710 | 0.800251 | 1.572918e-48 | -8.615850e-47 |
| Msa0626710 | Msa0868000 | 0.843416 | 1.420346e-58 | -8.615850e-47 |
| Msa0626710 | Msa0882780 | 0.812343 | 4.446177e-51 | -8.615850e-47 |
| Msa0483630 | Msa0626710 | 0.838326 | 3.073629e-57 | -8.615850e-47 |
| Msa0586860 | Msa0626710 | 0.942381 | 7.956393e-102 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0626710 | MtrunA17_Chr4g0002861 | 98.227 | 564 | 10 | 0 | 1 | 564 | 1 | 564 | 0.0 | 1135 |
| Msa0626710 | MtrunA17_Chr4g0002901 | 89.785 | 558 | 55 | 2 | 1 | 557 | 1 | 557 | 0.0 | 1001 |
| Msa0626710 | MtrunA17_Chr4g0002911 | 73.297 | 558 | 145 | 4 | 1 | 557 | 1 | 555 | 0.0 | 804 |
| Msa0626710 | MtrunA17_Chr7g0220521 | 59.459 | 555 | 213 | 5 | 1 | 554 | 1 | 544 | 0.0 | 675 |
| Msa0626710 | MtrunA17_Chr2g0300311 | 31.020 | 245 | 140 | 7 | 21 | 254 | 30 | 256 | 5.25e-20 | 93.2 |
| Msa0626710 | MtrunA17_Chr2g0297831 | 31.667 | 240 | 144 | 6 | 21 | 254 | 47 | 272 | 3.87e-19 | 90.9 |
| Msa0626710 | MtrunA17_Chr5g0439641 | 28.774 | 212 | 134 | 6 | 357 | 557 | 246 | 451 | 6.39e-18 | 86.7 |
| Msa0626710 | MtrunA17_Chr5g0439641 | 27.419 | 248 | 150 | 10 | 18 | 246 | 4 | 240 | 3.41e-13 | 72.0 |
| Msa0626710 | MtrunA17_Chr5g0439661 | 32.386 | 176 | 106 | 6 | 43 | 214 | 29 | 195 | 9.68e-18 | 82.0 |
| Msa0626710 | MtrunA17_Chr7g0265891 | 29.493 | 217 | 140 | 5 | 38 | 252 | 47 | 252 | 4.37e-17 | 84.0 |
| Msa0626710 | MtrunA17_Chr5g0439721 | 33.333 | 189 | 117 | 6 | 373 | 559 | 257 | 438 | 2.67e-16 | 81.6 |
| Msa0626710 | MtrunA17_Chr5g0439721 | 26.316 | 247 | 141 | 8 | 18 | 246 | 4 | 227 | 7.76e-14 | 73.9 |
| Msa0626710 | MtrunA17_Chr5g0440401 | 28.922 | 204 | 134 | 6 | 356 | 557 | 24 | 218 | 2.14e-15 | 75.5 |
| Msa0626710 | MtrunA17_Chr5g0401791 | 30.058 | 173 | 106 | 7 | 21 | 187 | 78 | 241 | 4.23e-15 | 78.2 |
| Msa0626710 | MtrunA17_Chr2g0296801 | 29.050 | 179 | 121 | 5 | 377 | 552 | 175 | 350 | 4.75e-15 | 77.0 |
| Msa0626710 | MtrunA17_Chr6g0452601 | 26.347 | 167 | 106 | 2 | 42 | 208 | 25 | 174 | 6.93e-15 | 77.0 |
| Msa0626710 | MtrunA17_Chr6g0452601 | 26.554 | 177 | 129 | 1 | 375 | 550 | 242 | 418 | 3.08e-11 | 65.5 |
| Msa0626710 | MtrunA17_Chr8g0335061 | 32.934 | 167 | 96 | 6 | 42 | 204 | 27 | 181 | 1.75e-14 | 75.9 |
| Msa0626710 | MtrunA17_Chr8g0335061 | 29.452 | 146 | 98 | 3 | 395 | 539 | 288 | 429 | 3.73e-12 | 68.6 |
| Msa0626710 | MtrunA17_Chr6g0452161 | 26.190 | 168 | 108 | 2 | 40 | 207 | 23 | 174 | 6.23e-14 | 73.9 |
| Msa0626710 | MtrunA17_Chr5g0439681 | 28.571 | 182 | 121 | 5 | 379 | 557 | 137 | 312 | 7.18e-14 | 72.8 |
| Msa0626710 | MtrunA17_Chr6g0452551 | 25.309 | 162 | 104 | 2 | 42 | 203 | 25 | 169 | 8.23e-14 | 73.6 |
| Msa0626710 | MtrunA17_Chr7g0238251 | 24.346 | 497 | 267 | 19 | 59 | 527 | 49 | 464 | 1.24e-13 | 73.6 |
| Msa0626710 | MtrunA17_Chr7g0238511 | 28.191 | 188 | 130 | 4 | 372 | 555 | 252 | 438 | 1.32e-13 | 73.2 |
| Msa0626710 | MtrunA17_Chr6g0452561 | 28.500 | 200 | 132 | 3 | 358 | 550 | 230 | 425 | 2.27e-13 | 72.4 |
| Msa0626710 | MtrunA17_Chr6g0452561 | 25.789 | 190 | 124 | 6 | 20 | 207 | 5 | 179 | 2.61e-11 | 65.9 |
| Msa0626710 | MtrunA17_Chr8g0335011 | 30.588 | 170 | 105 | 4 | 42 | 198 | 36 | 205 | 2.78e-13 | 72.4 |
| Msa0626710 | MtrunA17_Chr8g0335011 | 30.464 | 151 | 96 | 4 | 395 | 540 | 339 | 485 | 6.56e-12 | 68.2 |
| Msa0626710 | MtrunA17_Chr8g0334951 | 32.075 | 159 | 93 | 6 | 42 | 196 | 29 | 176 | 3.39e-13 | 71.6 |
| Msa0626710 | MtrunA17_Chr6g0452531 | 24.873 | 197 | 127 | 4 | 22 | 218 | 7 | 182 | 4.24e-13 | 71.2 |
| Msa0626710 | MtrunA17_Chr6g0452531 | 28.492 | 179 | 127 | 1 | 373 | 550 | 232 | 410 | 3.31e-12 | 68.6 |
| Msa0626710 | MtrunA17_Chr6g0452501 | 24.691 | 162 | 105 | 2 | 42 | 203 | 25 | 169 | 4.57e-13 | 71.2 |
| Msa0626710 | MtrunA17_Chr6g0452501 | 28.977 | 176 | 122 | 3 | 377 | 550 | 236 | 410 | 3.54e-11 | 65.5 |
| Msa0626710 | MtrunA17_Chr6g0452611 | 25.309 | 162 | 106 | 3 | 42 | 203 | 24 | 170 | 7.66e-13 | 70.5 |
| Msa0626710 | MtrunA17_Chr6g0457371 | 26.519 | 181 | 114 | 5 | 43 | 222 | 26 | 188 | 9.79e-13 | 70.1 |
| Msa0626710 | MtrunA17_Chr8g0334971 | 26.667 | 225 | 146 | 7 | 42 | 258 | 27 | 240 | 1.08e-12 | 70.5 |
| Msa0626710 | MtrunA17_Chr8g0334971 | 30.345 | 145 | 98 | 3 | 395 | 539 | 289 | 430 | 1.13e-12 | 70.1 |
| Msa0626710 | MtrunA17_Chr8g0335071 | 29.487 | 156 | 106 | 4 | 395 | 550 | 304 | 455 | 1.31e-12 | 70.1 |
| Msa0626710 | MtrunA17_Chr7g0238051 | 28.767 | 146 | 102 | 2 | 411 | 555 | 223 | 367 | 1.33e-12 | 69.7 |
| Msa0626710 | MtrunA17_Chr7g0238131 | 28.342 | 187 | 129 | 4 | 373 | 555 | 232 | 417 | 2.83e-12 | 68.9 |
| Msa0626710 | MtrunA17_Chr7g0238231 | 29.452 | 146 | 101 | 2 | 411 | 555 | 348 | 492 | 3.29e-12 | 68.9 |
| Msa0626710 | MtrunA17_Chr8g0334911 | 31.250 | 160 | 96 | 6 | 42 | 198 | 28 | 176 | 6.18e-12 | 67.8 |
| Msa0626710 | MtrunA17_Chr3g0118601 | 28.902 | 173 | 122 | 1 | 379 | 550 | 277 | 449 | 1.29e-11 | 67.0 |
| Msa0626710 | MtrunA17_Chr7g0218171 | 28.161 | 174 | 124 | 1 | 378 | 550 | 124 | 297 | 1.35e-11 | 65.9 |
| Msa0626710 | MtrunA17_Chr7g0242071 | 31.847 | 157 | 99 | 3 | 41 | 196 | 28 | 177 | 1.56e-11 | 67.0 |
| Msa0626710 | MtrunA17_Chr8g0352491 | 28.125 | 160 | 90 | 4 | 411 | 551 | 32 | 185 | 6.63e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0626710 | AT3G02645.1 | 46.857 | 525 | 238 | 8 | 9 | 528 | 9 | 497 | 2.26e-164 | 478 |
| Msa0626710 | AT3G50180.1 | 32.922 | 243 | 144 | 11 | 19 | 253 | 153 | 384 | 5.09e-27 | 115 |
| Msa0626710 | AT3G50180.1 | 31.148 | 183 | 116 | 5 | 377 | 552 | 403 | 582 | 1.02e-13 | 74.3 |
| Msa0626710 | AT3G50120.1 | 36.364 | 187 | 108 | 7 | 21 | 204 | 80 | 258 | 3.97e-25 | 109 |
| Msa0626710 | AT3G50120.1 | 29.050 | 179 | 121 | 3 | 377 | 552 | 350 | 525 | 8.41e-13 | 71.2 |
| Msa0626710 | AT3G50170.2 | 33.333 | 186 | 115 | 6 | 21 | 204 | 90 | 268 | 6.27e-24 | 105 |
| Msa0626710 | AT3G50170.1 | 33.333 | 186 | 115 | 6 | 21 | 204 | 90 | 268 | 1.87e-23 | 104 |
| Msa0626710 | AT3G50170.1 | 30.168 | 179 | 119 | 3 | 377 | 552 | 358 | 533 | 3.23e-14 | 75.9 |
| Msa0626710 | AT3G50130.1 | 32.979 | 188 | 115 | 7 | 21 | 205 | 116 | 295 | 2.14e-21 | 98.6 |
| Msa0626710 | AT3G50140.2 | 32.258 | 186 | 117 | 6 | 21 | 204 | 90 | 268 | 9.37e-21 | 95.5 |
| Msa0626710 | AT3G50140.1 | 32.258 | 186 | 117 | 6 | 21 | 204 | 90 | 268 | 1.86e-20 | 95.5 |
| Msa0626710 | AT3G50140.1 | 26.154 | 195 | 138 | 3 | 362 | 551 | 339 | 532 | 2.36e-12 | 70.1 |
| Msa0626710 | AT3G50150.2 | 26.493 | 268 | 175 | 9 | 21 | 274 | 67 | 326 | 1.50e-19 | 92.0 |
| Msa0626710 | AT3G50150.1 | 26.493 | 268 | 175 | 9 | 21 | 274 | 67 | 326 | 1.61e-19 | 92.4 |
| Msa0626710 | AT3G50150.1 | 30.899 | 178 | 119 | 3 | 377 | 552 | 328 | 503 | 3.49e-16 | 82.0 |
| Msa0626710 | AT3G50160.1 | 26.289 | 194 | 122 | 5 | 41 | 228 | 103 | 281 | 4.00e-17 | 84.7 |
| Msa0626710 | AT3G50160.1 | 29.319 | 191 | 128 | 4 | 364 | 552 | 310 | 495 | 3.45e-14 | 75.9 |
| Msa0626710 | AT5G11290.2 | 32.278 | 158 | 93 | 3 | 41 | 196 | 32 | 177 | 4.79e-17 | 84.0 |
| Msa0626710 | AT4G31980.1 | 32.278 | 158 | 93 | 4 | 42 | 197 | 293 | 438 | 5.41e-17 | 85.1 |
| Msa0626710 | AT3G47210.1 | 32.317 | 164 | 102 | 3 | 35 | 198 | 86 | 240 | 1.13e-15 | 80.1 |
| Msa0626710 | AT3G50190.4 | 30.233 | 172 | 111 | 6 | 21 | 190 | 73 | 237 | 1.99e-15 | 78.6 |
| Msa0626710 | AT3G50190.3 | 30.233 | 172 | 111 | 6 | 21 | 190 | 73 | 237 | 1.99e-15 | 78.6 |
| Msa0626710 | AT3G50190.2 | 30.233 | 172 | 111 | 6 | 21 | 190 | 73 | 237 | 2.15e-15 | 78.2 |
| Msa0626710 | AT3G50190.1 | 30.233 | 172 | 111 | 6 | 21 | 190 | 73 | 237 | 3.16e-15 | 79.0 |
| Msa0626710 | AT2G36430.1 | 26.009 | 223 | 146 | 4 | 38 | 255 | 41 | 249 | 1.30e-14 | 76.6 |
| Msa0626710 | AT3G47250.3 | 25.000 | 292 | 177 | 6 | 22 | 299 | 36 | 299 | 3.10e-14 | 75.9 |
| Msa0626710 | AT3G47250.2 | 25.000 | 292 | 177 | 6 | 22 | 299 | 36 | 299 | 3.10e-14 | 75.9 |
| Msa0626710 | AT3G47250.1 | 25.000 | 292 | 177 | 6 | 22 | 299 | 36 | 299 | 3.10e-14 | 75.9 |
| Msa0626710 | AT5G22560.1 | 26.692 | 266 | 132 | 10 | 22 | 252 | 24 | 261 | 2.29e-13 | 73.2 |
| Msa0626710 | AT3G47200.1 | 29.268 | 164 | 103 | 3 | 35 | 196 | 39 | 191 | 6.22e-13 | 71.6 |
| Msa0626710 | AT3G47200.2 | 29.268 | 164 | 103 | 3 | 35 | 196 | 39 | 191 | 6.22e-13 | 71.6 |
| Msa0626710 | AT5G22550.2 | 25.000 | 236 | 139 | 7 | 32 | 252 | 34 | 246 | 1.39e-12 | 70.5 |
| Msa0626710 | AT5G22550.2 | 28.889 | 180 | 127 | 1 | 377 | 555 | 308 | 487 | 2.21e-12 | 70.1 |
| Msa0626710 | AT5G22550.1 | 28.889 | 180 | 127 | 1 | 377 | 555 | 259 | 438 | 1.96e-12 | 70.1 |
| Msa0626710 | AT5G22540.1 | 28.108 | 185 | 116 | 4 | 22 | 198 | 6 | 181 | 3.25e-11 | 66.2 |
Find 75 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTGGTCCTTACCATTAT+TGG | 0.181399 | 4_3:+6689623 | Msa0626710:CDS |
| AGCAATCATTCAATGAAATT+TGG | 0.198118 | 4_3:+6690292 | Msa0626710:CDS |
| GCAAAGATTCTAAGAGAAAA+AGG | 0.234685 | 4_3:+6690801 | Msa0626710:CDS |
| TCATTTCCTGTTTCTAATTT+AGG | 0.239490 | 4_3:-6690183 | None:intergenic |
| CAATGTGCCAAAGCTTCTTA+TGG | 0.260296 | 4_3:+6689564 | Msa0626710:CDS |
| TATACTTGTAGTCGCTTCTT+TGG | 0.274811 | 4_3:+6691080 | Msa0626710:CDS |
| CAACCTTTGATGAACTTAGA+TGG | 0.280233 | 4_3:+6689470 | Msa0626710:CDS |
| CCTCTTCAAATTCTTCTTCA+AGG | 0.288017 | 4_3:-6689513 | None:intergenic |
| TGCAAGAAGGTGCAACAAAA+AGG | 0.295985 | 4_3:+6689872 | Msa0626710:CDS |
| TTACCTTCCTATAATTGGTT+TGG | 0.311845 | 4_3:+6690656 | Msa0626710:CDS |
| CTTTGCATTTCATAGAGTTC+TGG | 0.331900 | 4_3:-6689649 | None:intergenic |
| ATCAAGCAAATGTGCACTTT+CGG | 0.361310 | 4_3:-6690139 | None:intergenic |
| TTAACATCCAAACCAATTAT+AGG | 0.368618 | 4_3:-6690663 | None:intergenic |
| TTTATGAAGTCTTATGTGTT+TGG | 0.373276 | 4_3:+6690981 | Msa0626710:CDS |
| GTTAAAGAACTTGTGAAGTC+AGG | 0.374433 | 4_3:+6690567 | Msa0626710:CDS |
| CTCTTCAAATTCTTCTTCAA+GGG | 0.387908 | 4_3:-6689512 | None:intergenic |
| GACCCATAAAATCTCTCAAA+AGG | 0.390635 | 4_3:+6690340 | Msa0626710:CDS |
| TTTGTTCATACTTTGTCAAT+TGG | 0.390968 | 4_3:-6689741 | None:intergenic |
| CTTGGTATGCTTCCATTAGT+AGG | 0.393361 | 4_3:-6690603 | None:intergenic |
| CGTTCAAATCTAAGAATTTG+TGG | 0.397038 | 4_3:-6689780 | None:intergenic |
| TGTTGTGGAACGTAAGAATC+TGG | 0.408953 | 4_3:-6689595 | None:intergenic |
| AAGTATGAACAAAGGGTTAG+AGG | 0.411014 | 4_3:+6689751 | Msa0626710:CDS |
| TATAATTCCATTCATCAATT+CGG | 0.422039 | 4_3:-6690763 | None:intergenic |
| ATTGTGCCTAAATTAGAAAC+AGG | 0.430168 | 4_3:+6690177 | Msa0626710:CDS |
| AGTCTTATGTGTTTGGTTCA+TGG | 0.433433 | 4_3:+6690988 | Msa0626710:CDS |
| AGAGTTCTGGTCTCCAATAA+TGG | 0.437374 | 4_3:-6689636 | None:intergenic |
| AAAATCATAAGCAATCTTCC+AGG | 0.447323 | 4_3:+6690408 | Msa0626710:CDS |
| TCACTAGCCATAAGAAGCTT+TGG | 0.455256 | 4_3:-6689571 | None:intergenic |
| GTTCCACAACAAGTTGCAAT+TGG | 0.472042 | 4_3:+6689607 | Msa0626710:CDS |
| CGTGAAGATGAAAATTCAAA+AGG | 0.480641 | 4_3:+6690252 | Msa0626710:CDS |
| CAAATTTATGCAATGCAAGA+AGG | 0.480891 | 4_3:+6689859 | Msa0626710:CDS |
| TATGAATCATCGGTTGGATC+GGG | 0.482387 | 4_3:+6690717 | Msa0626710:CDS |
| CACAAATTCTTAGATTTGAA+CGG | 0.491137 | 4_3:+6689781 | Msa0626710:CDS |
| AAGTGCTTGTAAAGTTTCCA+TGG | 0.492984 | 4_3:+6690385 | Msa0626710:CDS |
| GGACCAATTGCAACTTGTTG+TGG | 0.498583 | 4_3:-6689610 | None:intergenic |
| CTTTCGGAGACTTTAATGCT+TGG | 0.499690 | 4_3:-6690123 | None:intergenic |
| ATTGACAAAGTATGAACAAA+GGG | 0.500245 | 4_3:+6689744 | Msa0626710:CDS |
| GCAAGTCATTGAGATTATCA+AGG | 0.501646 | 4_3:+6690883 | Msa0626710:CDS |
| AACTTTACAAGCACTTTCAA+AGG | 0.504638 | 4_3:-6690378 | None:intergenic |
| ATCGGTTGGATCGGGACCAT+TGG | 0.507267 | 4_3:+6690725 | Msa0626710:CDS |
| TTTGCATCGAAATTAATACT+TGG | 0.511465 | 4_3:-6690621 | None:intergenic |
| TTTAGAATTATATGACATAG+TGG | 0.512393 | 4_3:-6689446 | None:intergenic |
| TTCACAAGTTCTTTAACAGA+AGG | 0.512475 | 4_3:-6690561 | None:intergenic |
| AACCTTTGATGAACTTAGAT+GGG | 0.512620 | 4_3:+6689471 | Msa0626710:CDS |
| TCAAAGGTGGCTTGTTAACA+AGG | 0.514604 | 4_3:-6690521 | None:intergenic |
| AACTCTTCAATCATCTTGAA+AGG | 0.518028 | 4_3:-6690099 | None:intergenic |
| GAAGAATTTGAAGAGGAAGA+TGG | 0.518706 | 4_3:+6689520 | Msa0626710:CDS |
| ACCCATAAAATCTCTCAAAA+GGG | 0.523730 | 4_3:+6690341 | Msa0626710:CDS |
| CTTGGTTGCATATGAATCAT+CGG | 0.528032 | 4_3:+6690707 | Msa0626710:CDS |
| CAAGTCATTGAGATTATCAA+GGG | 0.529827 | 4_3:+6690884 | Msa0626710:CDS |
| ATATGAATCATCGGTTGGAT+CGG | 0.532054 | 4_3:+6690716 | Msa0626710:CDS |
| GTTGCATATGAATCATCGGT+TGG | 0.535467 | 4_3:+6690711 | Msa0626710:CDS |
| CGTTACACCGAATTGATGAA+TGG | 0.539855 | 4_3:+6690756 | Msa0626710:CDS |
| TTAAAGAACTTGTGAAGTCA+GGG | 0.544355 | 4_3:+6690568 | Msa0626710:CDS |
| ATAAAGAAGTTGCTGATATG+TGG | 0.544942 | 4_3:+6690850 | Msa0626710:CDS |
| ATAGTGATTTCTTCAATCAA+AGG | 0.550729 | 4_3:-6690537 | None:intergenic |
| TCACATTTAGTTGACTATGC+TGG | 0.552649 | 4_3:+6689913 | Msa0626710:CDS |
| TGTTGAGATTCAACAAGAAG+AGG | 0.558169 | 4_3:+6690218 | Msa0626710:CDS |
| CACCCATCTAAGTTCATCAA+AGG | 0.560565 | 4_3:-6689473 | None:intergenic |
| TCTGGTCTCCAATAATGGTA+AGG | 0.564617 | 4_3:-6689631 | None:intergenic |
| CCTTGAAGAAGAATTTGAAG+AGG | 0.574533 | 4_3:+6689513 | Msa0626710:CDS |
| GTGATTTCTTCAATCAAAGG+TGG | 0.576916 | 4_3:-6690534 | None:intergenic |
| GAAGTTGCTGATATGTGGAA+TGG | 0.576981 | 4_3:+6690855 | Msa0626710:CDS |
| ATTCTTTCAAAACTTAACAA+AGG | 0.581545 | 4_3:+6690318 | Msa0626710:CDS |
| CATCCAAACCAATTATAGGA+AGG | 0.589371 | 4_3:-6690659 | None:intergenic |
| ACTTTGTCAATTGGTCAACA+AGG | 0.606799 | 4_3:-6689732 | None:intergenic |
| GTGTAACGCGTTATAACCAA+TGG | 0.610442 | 4_3:-6690741 | None:intergenic |
| AATTGACAAAGTATGAACAA+AGG | 0.638794 | 4_3:+6689743 | Msa0626710:CDS |
| AGATTTGAACGGAGAAACGA+TGG | 0.639181 | 4_3:+6689792 | Msa0626710:CDS |
| GAATGGAATTATAGACTCGG+AGG | 0.673937 | 4_3:+6690773 | Msa0626710:CDS |
| ATCATAAGCAATCTTCCAGG+AGG | 0.678359 | 4_3:+6690411 | Msa0626710:CDS |
| CAAAGGTGGCTTGTTAACAA+GGG | 0.680704 | 4_3:-6690520 | None:intergenic |
| TGAACGGAGAAACGATGGTG+TGG | 0.683030 | 4_3:+6689797 | Msa0626710:CDS |
| TAAAGAACTTGTGAAGTCAG+GGG | 0.688848 | 4_3:+6690569 | Msa0626710:CDS |
| GATGAATGGAATTATAGACT+CGG | 0.696616 | 4_3:+6690770 | Msa0626710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTCTCAAAACAAATAA+CGG | - | chr4_3:6689997-6690016 | None:intergenic | 15.0% |
| !!! | TTATTTTTCTCTAAAGAAAA+AGG | + | chr4_3:6690462-6690481 | Msa0626710:CDS | 15.0% |
| !!! | AATTTTCTCAAAACAAATAA+CGG | - | chr4_3:6689997-6690016 | None:intergenic | 15.0% |
| !!! | TTATTTTTCTCTAAAGAAAA+AGG | + | chr4_3:6690462-6690481 | Msa0626710:CDS | 15.0% |
| !!! | TTTAGAATTATATGACATAG+TGG | - | chr4_3:6689449-6689468 | None:intergenic | 20.0% |
| !!! | ATGTTGATTTTCATGTTTAT+TGG | + | chr4_3:6690057-6690076 | Msa0626710:CDS | 20.0% |
| !! | ATTCTTTCAAAACTTAACAA+AGG | + | chr4_3:6690318-6690337 | Msa0626710:CDS | 20.0% |
| !! | GAGAAAAATAAAGATTCAAT+AGG | - | chr4_3:6690453-6690472 | None:intergenic | 20.0% |
| !! | TATAATTCCATTCATCAATT+CGG | - | chr4_3:6690766-6690785 | None:intergenic | 20.0% |
| !!! | GTTTTATAATAGTAGAATGA+AGG | + | chr4_3:6690944-6690963 | Msa0626710:CDS | 20.0% |
| !!! | TATTTTCTTGTTGTTTTTGA+TGG | + | chr4_3:6691034-6691053 | Msa0626710:CDS | 20.0% |
| !!! | ATTTTCTTGTTGTTTTTGAT+GGG | + | chr4_3:6691035-6691054 | Msa0626710:CDS | 20.0% |
| !!! | TTTAGAATTATATGACATAG+TGG | - | chr4_3:6689449-6689468 | None:intergenic | 20.0% |
| !!! | ATGTTGATTTTCATGTTTAT+TGG | + | chr4_3:6690057-6690076 | Msa0626710:CDS | 20.0% |
| !! | ATTCTTTCAAAACTTAACAA+AGG | + | chr4_3:6690318-6690337 | Msa0626710:CDS | 20.0% |
| !! | GAGAAAAATAAAGATTCAAT+AGG | - | chr4_3:6690453-6690472 | None:intergenic | 20.0% |
| !! | TATAATTCCATTCATCAATT+CGG | - | chr4_3:6690766-6690785 | None:intergenic | 20.0% |
| !!! | GTTTTATAATAGTAGAATGA+AGG | + | chr4_3:6690944-6690963 | Msa0626710:CDS | 20.0% |
| !!! | TATTTTCTTGTTGTTTTTGA+TGG | + | chr4_3:6691034-6691053 | Msa0626710:CDS | 20.0% |
| !!! | ATTTTCTTGTTGTTTTTGAT+GGG | + | chr4_3:6691035-6691054 | Msa0626710:CDS | 20.0% |
| !! | TGATTTCAAGAATCTTTTTG+TGG | - | chr4_3:6689689-6689708 | None:intergenic | 25.0% |
| ! | TTTGTTCATACTTTGTCAAT+TGG | - | chr4_3:6689744-6689763 | None:intergenic | 25.0% |
| ! | AATTGACAAAGTATGAACAA+AGG | + | chr4_3:6689743-6689762 | Msa0626710:CDS | 25.0% |
| ! | ATTGACAAAGTATGAACAAA+GGG | + | chr4_3:6689744-6689763 | Msa0626710:CDS | 25.0% |
| ! | CACAAATTCTTAGATTTGAA+CGG | + | chr4_3:6689781-6689800 | Msa0626710:CDS | 25.0% |
| !!! | TCATTTCCTGTTTCTAATTT+AGG | - | chr4_3:6690186-6690205 | None:intergenic | 25.0% |
| ! | AGCAATCATTCAATGAAATT+TGG | + | chr4_3:6690292-6690311 | Msa0626710:CDS | 25.0% |
| ! | ATAGTGATTTCTTCAATCAA+AGG | - | chr4_3:6690540-6690559 | None:intergenic | 25.0% |
| ! | TTTGCATCGAAATTAATACT+TGG | - | chr4_3:6690624-6690643 | None:intergenic | 25.0% |
| !! | ACTTTTTACCTTCCTATAAT+TGG | + | chr4_3:6690651-6690670 | Msa0626710:CDS | 25.0% |
| ! | TTAACATCCAAACCAATTAT+AGG | - | chr4_3:6690666-6690685 | None:intergenic | 25.0% |
| !! | CAAGTTTCTAAGAAAAACTT+CGG | - | chr4_3:6690691-6690710 | None:intergenic | 25.0% |
| !! | CAAAGATTCTAAGAGAAAAA+GGG | + | chr4_3:6690802-6690821 | Msa0626710:CDS | 25.0% |
| !! | TTTATGAAGTCTTATGTGTT+TGG | + | chr4_3:6690981-6691000 | Msa0626710:CDS | 25.0% |
| !! | TGATTTCAAGAATCTTTTTG+TGG | - | chr4_3:6689689-6689708 | None:intergenic | 25.0% |
| ! | TTTGTTCATACTTTGTCAAT+TGG | - | chr4_3:6689744-6689763 | None:intergenic | 25.0% |
| ! | AATTGACAAAGTATGAACAA+AGG | + | chr4_3:6689743-6689762 | Msa0626710:CDS | 25.0% |
| ! | ATTGACAAAGTATGAACAAA+GGG | + | chr4_3:6689744-6689763 | Msa0626710:CDS | 25.0% |
| ! | CACAAATTCTTAGATTTGAA+CGG | + | chr4_3:6689781-6689800 | Msa0626710:CDS | 25.0% |
| !!! | TCATTTCCTGTTTCTAATTT+AGG | - | chr4_3:6690186-6690205 | None:intergenic | 25.0% |
| ! | AGCAATCATTCAATGAAATT+TGG | + | chr4_3:6690292-6690311 | Msa0626710:CDS | 25.0% |
| ! | ATAGTGATTTCTTCAATCAA+AGG | - | chr4_3:6690540-6690559 | None:intergenic | 25.0% |
| ! | TTTGCATCGAAATTAATACT+TGG | - | chr4_3:6690624-6690643 | None:intergenic | 25.0% |
| !! | ACTTTTTACCTTCCTATAAT+TGG | + | chr4_3:6690651-6690670 | Msa0626710:CDS | 25.0% |
| ! | TTAACATCCAAACCAATTAT+AGG | - | chr4_3:6690666-6690685 | None:intergenic | 25.0% |
| !! | CAAGTTTCTAAGAAAAACTT+CGG | - | chr4_3:6690691-6690710 | None:intergenic | 25.0% |
| !! | CAAAGATTCTAAGAGAAAAA+GGG | + | chr4_3:6690802-6690821 | Msa0626710:CDS | 25.0% |
| !! | TTTATGAAGTCTTATGTGTT+TGG | + | chr4_3:6690981-6691000 | Msa0626710:CDS | 25.0% |
| AACCTTTGATGAACTTAGAT+GGG | + | chr4_3:6689471-6689490 | Msa0626710:CDS | 30.0% | |
| CTCTTCAAATTCTTCTTCAA+GGG | - | chr4_3:6689515-6689534 | None:intergenic | 30.0% | |
| CGTTCAAATCTAAGAATTTG+TGG | - | chr4_3:6689783-6689802 | None:intergenic | 30.0% | |
| CAAATTTATGCAATGCAAGA+AGG | + | chr4_3:6689859-6689878 | Msa0626710:CDS | 30.0% | |
| AACTCTTCAATCATCTTGAA+AGG | - | chr4_3:6690102-6690121 | None:intergenic | 30.0% | |
| ATTGTGCCTAAATTAGAAAC+AGG | + | chr4_3:6690177-6690196 | Msa0626710:CDS | 30.0% | |
| CGTGAAGATGAAAATTCAAA+AGG | + | chr4_3:6690252-6690271 | Msa0626710:CDS | 30.0% | |
| ACCCATAAAATCTCTCAAAA+GGG | + | chr4_3:6690341-6690360 | Msa0626710:CDS | 30.0% | |
| !! | ACCCTTTTGAGAGATTTTAT+GGG | - | chr4_3:6690345-6690364 | None:intergenic | 30.0% |
| !! | TACCCTTTTGAGAGATTTTA+TGG | - | chr4_3:6690346-6690365 | None:intergenic | 30.0% |
| AACTTTACAAGCACTTTCAA+AGG | - | chr4_3:6690381-6690400 | None:intergenic | 30.0% | |
| ! | AGATTGCTTATGATTTTCCA+TGG | - | chr4_3:6690405-6690424 | None:intergenic | 30.0% |
| AAAATCATAAGCAATCTTCC+AGG | + | chr4_3:6690408-6690427 | Msa0626710:CDS | 30.0% | |
| TTCACAAGTTCTTTAACAGA+AGG | - | chr4_3:6690564-6690583 | None:intergenic | 30.0% | |
| TTAAAGAACTTGTGAAGTCA+GGG | + | chr4_3:6690568-6690587 | Msa0626710:CDS | 30.0% | |
| ! | GTGAATTTTTCTCCTACTAA+TGG | + | chr4_3:6690591-6690610 | Msa0626710:CDS | 30.0% |
| TTACCTTCCTATAATTGGTT+TGG | + | chr4_3:6690656-6690675 | Msa0626710:CDS | 30.0% | |
| ! | CGAAGTTTTTCTTAGAAACT+TGG | + | chr4_3:6690689-6690708 | Msa0626710:CDS | 30.0% |
| GATGAATGGAATTATAGACT+CGG | + | chr4_3:6690770-6690789 | Msa0626710:CDS | 30.0% | |
| ! | GCAAAGATTCTAAGAGAAAA+AGG | + | chr4_3:6690801-6690820 | Msa0626710:CDS | 30.0% |
| ATAAAGAAGTTGCTGATATG+TGG | + | chr4_3:6690850-6690869 | Msa0626710:CDS | 30.0% | |
| CAAGTCATTGAGATTATCAA+GGG | + | chr4_3:6690884-6690903 | Msa0626710:CDS | 30.0% | |
| !!! | ATTATCAAGGGTTTTGTTCT+TGG | + | chr4_3:6690896-6690915 | Msa0626710:CDS | 30.0% |
| AACCTTTGATGAACTTAGAT+GGG | + | chr4_3:6689471-6689490 | Msa0626710:CDS | 30.0% | |
| CTCTTCAAATTCTTCTTCAA+GGG | - | chr4_3:6689515-6689534 | None:intergenic | 30.0% | |
| CGTTCAAATCTAAGAATTTG+TGG | - | chr4_3:6689783-6689802 | None:intergenic | 30.0% | |
| CAAATTTATGCAATGCAAGA+AGG | + | chr4_3:6689859-6689878 | Msa0626710:CDS | 30.0% | |
| AACTCTTCAATCATCTTGAA+AGG | - | chr4_3:6690102-6690121 | None:intergenic | 30.0% | |
| ATTGTGCCTAAATTAGAAAC+AGG | + | chr4_3:6690177-6690196 | Msa0626710:CDS | 30.0% | |
| CGTGAAGATGAAAATTCAAA+AGG | + | chr4_3:6690252-6690271 | Msa0626710:CDS | 30.0% | |
| ACCCATAAAATCTCTCAAAA+GGG | + | chr4_3:6690341-6690360 | Msa0626710:CDS | 30.0% | |
| !! | ACCCTTTTGAGAGATTTTAT+GGG | - | chr4_3:6690345-6690364 | None:intergenic | 30.0% |
| !! | TACCCTTTTGAGAGATTTTA+TGG | - | chr4_3:6690346-6690365 | None:intergenic | 30.0% |
| AACTTTACAAGCACTTTCAA+AGG | - | chr4_3:6690381-6690400 | None:intergenic | 30.0% | |
| ! | AGATTGCTTATGATTTTCCA+TGG | - | chr4_3:6690405-6690424 | None:intergenic | 30.0% |
| AAAATCATAAGCAATCTTCC+AGG | + | chr4_3:6690408-6690427 | Msa0626710:CDS | 30.0% | |
| TTCACAAGTTCTTTAACAGA+AGG | - | chr4_3:6690564-6690583 | None:intergenic | 30.0% | |
| TTAAAGAACTTGTGAAGTCA+GGG | + | chr4_3:6690568-6690587 | Msa0626710:CDS | 30.0% | |
| ! | GTGAATTTTTCTCCTACTAA+TGG | + | chr4_3:6690591-6690610 | Msa0626710:CDS | 30.0% |
| TTACCTTCCTATAATTGGTT+TGG | + | chr4_3:6690656-6690675 | Msa0626710:CDS | 30.0% | |
| ! | CGAAGTTTTTCTTAGAAACT+TGG | + | chr4_3:6690689-6690708 | Msa0626710:CDS | 30.0% |
| GATGAATGGAATTATAGACT+CGG | + | chr4_3:6690770-6690789 | Msa0626710:CDS | 30.0% | |
| ! | GCAAAGATTCTAAGAGAAAA+AGG | + | chr4_3:6690801-6690820 | Msa0626710:CDS | 30.0% |
| ATAAAGAAGTTGCTGATATG+TGG | + | chr4_3:6690850-6690869 | Msa0626710:CDS | 30.0% | |
| CAAGTCATTGAGATTATCAA+GGG | + | chr4_3:6690884-6690903 | Msa0626710:CDS | 30.0% | |
| !!! | ATTATCAAGGGTTTTGTTCT+TGG | + | chr4_3:6690896-6690915 | Msa0626710:CDS | 30.0% |
| CAACCTTTGATGAACTTAGA+TGG | + | chr4_3:6689470-6689489 | Msa0626710:CDS | 35.0% | |
| CCTCTTCAAATTCTTCTTCA+AGG | - | chr4_3:6689516-6689535 | None:intergenic | 35.0% | |
| CCTTGAAGAAGAATTTGAAG+AGG | + | chr4_3:6689513-6689532 | Msa0626710:CDS | 35.0% | |
| GAAGAATTTGAAGAGGAAGA+TGG | + | chr4_3:6689520-6689539 | Msa0626710:CDS | 35.0% | |
| CAATTGGTCCTTACCATTAT+TGG | + | chr4_3:6689623-6689642 | Msa0626710:CDS | 35.0% | |
| CTTTGCATTTCATAGAGTTC+TGG | - | chr4_3:6689652-6689671 | None:intergenic | 35.0% | |
| ACTTTGTCAATTGGTCAACA+AGG | - | chr4_3:6689735-6689754 | None:intergenic | 35.0% | |
| AAGTATGAACAAAGGGTTAG+AGG | + | chr4_3:6689751-6689770 | Msa0626710:CDS | 35.0% | |
| TCACATTTAGTTGACTATGC+TGG | + | chr4_3:6689913-6689932 | Msa0626710:CDS | 35.0% | |
| ATCAAGCAAATGTGCACTTT+CGG | - | chr4_3:6690142-6690161 | None:intergenic | 35.0% | |
| TGTTGAGATTCAACAAGAAG+AGG | + | chr4_3:6690218-6690237 | Msa0626710:CDS | 35.0% | |
| GACCCATAAAATCTCTCAAA+AGG | + | chr4_3:6690340-6690359 | Msa0626710:CDS | 35.0% | |
| AAGTGCTTGTAAAGTTTCCA+TGG | + | chr4_3:6690385-6690404 | Msa0626710:CDS | 35.0% | |
| !!! | TGTTTTAGAAGTTTACCTCC+TGG | - | chr4_3:6690429-6690448 | None:intergenic | 35.0% |
| GTGATTTCTTCAATCAAAGG+TGG | - | chr4_3:6690537-6690556 | None:intergenic | 35.0% | |
| GTTAAAGAACTTGTGAAGTC+AGG | + | chr4_3:6690567-6690586 | Msa0626710:CDS | 35.0% | |
| TAAAGAACTTGTGAAGTCAG+GGG | + | chr4_3:6690569-6690588 | Msa0626710:CDS | 35.0% | |
| CATCCAAACCAATTATAGGA+AGG | - | chr4_3:6690662-6690681 | None:intergenic | 35.0% | |
| CTTGGTTGCATATGAATCAT+CGG | + | chr4_3:6690707-6690726 | Msa0626710:CDS | 35.0% | |
| ! | ATATGAATCATCGGTTGGAT+CGG | + | chr4_3:6690716-6690735 | Msa0626710:CDS | 35.0% |
| GCAAGTCATTGAGATTATCA+AGG | + | chr4_3:6690883-6690902 | Msa0626710:CDS | 35.0% | |
| ! | AGTCTTATGTGTTTGGTTCA+TGG | + | chr4_3:6690988-6691007 | Msa0626710:CDS | 35.0% |
| TATACTTGTAGTCGCTTCTT+TGG | + | chr4_3:6691080-6691099 | Msa0626710:CDS | 35.0% | |
| CAACCTTTGATGAACTTAGA+TGG | + | chr4_3:6689470-6689489 | Msa0626710:CDS | 35.0% | |
| CCTCTTCAAATTCTTCTTCA+AGG | - | chr4_3:6689516-6689535 | None:intergenic | 35.0% | |
| CCTTGAAGAAGAATTTGAAG+AGG | + | chr4_3:6689513-6689532 | Msa0626710:CDS | 35.0% | |
| GAAGAATTTGAAGAGGAAGA+TGG | + | chr4_3:6689520-6689539 | Msa0626710:CDS | 35.0% | |
| CAATTGGTCCTTACCATTAT+TGG | + | chr4_3:6689623-6689642 | Msa0626710:CDS | 35.0% | |
| CTTTGCATTTCATAGAGTTC+TGG | - | chr4_3:6689652-6689671 | None:intergenic | 35.0% | |
| ACTTTGTCAATTGGTCAACA+AGG | - | chr4_3:6689735-6689754 | None:intergenic | 35.0% | |
| AAGTATGAACAAAGGGTTAG+AGG | + | chr4_3:6689751-6689770 | Msa0626710:CDS | 35.0% | |
| TCACATTTAGTTGACTATGC+TGG | + | chr4_3:6689913-6689932 | Msa0626710:CDS | 35.0% | |
| ATCAAGCAAATGTGCACTTT+CGG | - | chr4_3:6690142-6690161 | None:intergenic | 35.0% | |
| TGTTGAGATTCAACAAGAAG+AGG | + | chr4_3:6690218-6690237 | Msa0626710:CDS | 35.0% | |
| GACCCATAAAATCTCTCAAA+AGG | + | chr4_3:6690340-6690359 | Msa0626710:CDS | 35.0% | |
| AAGTGCTTGTAAAGTTTCCA+TGG | + | chr4_3:6690385-6690404 | Msa0626710:CDS | 35.0% | |
| !!! | TGTTTTAGAAGTTTACCTCC+TGG | - | chr4_3:6690429-6690448 | None:intergenic | 35.0% |
| GTGATTTCTTCAATCAAAGG+TGG | - | chr4_3:6690537-6690556 | None:intergenic | 35.0% | |
| GTTAAAGAACTTGTGAAGTC+AGG | + | chr4_3:6690567-6690586 | Msa0626710:CDS | 35.0% | |
| TAAAGAACTTGTGAAGTCAG+GGG | + | chr4_3:6690569-6690588 | Msa0626710:CDS | 35.0% | |
| CATCCAAACCAATTATAGGA+AGG | - | chr4_3:6690662-6690681 | None:intergenic | 35.0% | |
| CTTGGTTGCATATGAATCAT+CGG | + | chr4_3:6690707-6690726 | Msa0626710:CDS | 35.0% | |
| ! | ATATGAATCATCGGTTGGAT+CGG | + | chr4_3:6690716-6690735 | Msa0626710:CDS | 35.0% |
| GCAAGTCATTGAGATTATCA+AGG | + | chr4_3:6690883-6690902 | Msa0626710:CDS | 35.0% | |
| ! | AGTCTTATGTGTTTGGTTCA+TGG | + | chr4_3:6690988-6691007 | Msa0626710:CDS | 35.0% |
| TATACTTGTAGTCGCTTCTT+TGG | + | chr4_3:6691080-6691099 | Msa0626710:CDS | 35.0% | |
| CACCCATCTAAGTTCATCAA+AGG | - | chr4_3:6689476-6689495 | None:intergenic | 40.0% | |
| CAATGTGCCAAAGCTTCTTA+TGG | + | chr4_3:6689564-6689583 | Msa0626710:CDS | 40.0% | |
| TCACTAGCCATAAGAAGCTT+TGG | - | chr4_3:6689574-6689593 | None:intergenic | 40.0% | |
| TGTTGTGGAACGTAAGAATC+TGG | - | chr4_3:6689598-6689617 | None:intergenic | 40.0% | |
| GTTCCACAACAAGTTGCAAT+TGG | + | chr4_3:6689607-6689626 | Msa0626710:CDS | 40.0% | |
| TCTGGTCTCCAATAATGGTA+AGG | - | chr4_3:6689634-6689653 | None:intergenic | 40.0% | |
| ! | AGAGTTCTGGTCTCCAATAA+TGG | - | chr4_3:6689639-6689658 | None:intergenic | 40.0% |
| AGATTTGAACGGAGAAACGA+TGG | + | chr4_3:6689792-6689811 | Msa0626710:CDS | 40.0% | |
| ! | TGCAAGAAGGTGCAACAAAA+AGG | + | chr4_3:6689872-6689891 | Msa0626710:CDS | 40.0% |
| ! | GCAAGAAGGTGCAACAAAAA+GGG | + | chr4_3:6689873-6689892 | Msa0626710:CDS | 40.0% |
| CTTTCGGAGACTTTAATGCT+TGG | - | chr4_3:6690126-6690145 | None:intergenic | 40.0% | |
| ATCATAAGCAATCTTCCAGG+AGG | + | chr4_3:6690411-6690430 | Msa0626710:CDS | 40.0% | |
| !! | CAAAGGTGGCTTGTTAACAA+GGG | - | chr4_3:6690523-6690542 | None:intergenic | 40.0% |
| !! | TCAAAGGTGGCTTGTTAACA+AGG | - | chr4_3:6690524-6690543 | None:intergenic | 40.0% |
| CTTGGTATGCTTCCATTAGT+AGG | - | chr4_3:6690606-6690625 | None:intergenic | 40.0% | |
| GTTGCATATGAATCATCGGT+TGG | + | chr4_3:6690711-6690730 | Msa0626710:CDS | 40.0% | |
| ! | TATGAATCATCGGTTGGATC+GGG | + | chr4_3:6690717-6690736 | Msa0626710:CDS | 40.0% |
| GTGTAACGCGTTATAACCAA+TGG | - | chr4_3:6690744-6690763 | None:intergenic | 40.0% | |
| CGTTACACCGAATTGATGAA+TGG | + | chr4_3:6690756-6690775 | Msa0626710:CDS | 40.0% | |
| GAATGGAATTATAGACTCGG+AGG | + | chr4_3:6690773-6690792 | Msa0626710:CDS | 40.0% | |
| GAAGTTGCTGATATGTGGAA+TGG | + | chr4_3:6690855-6690874 | Msa0626710:CDS | 40.0% | |
| CACCCATCTAAGTTCATCAA+AGG | - | chr4_3:6689476-6689495 | None:intergenic | 40.0% | |
| CAATGTGCCAAAGCTTCTTA+TGG | + | chr4_3:6689564-6689583 | Msa0626710:CDS | 40.0% | |
| TCACTAGCCATAAGAAGCTT+TGG | - | chr4_3:6689574-6689593 | None:intergenic | 40.0% | |
| TGTTGTGGAACGTAAGAATC+TGG | - | chr4_3:6689598-6689617 | None:intergenic | 40.0% | |
| GTTCCACAACAAGTTGCAAT+TGG | + | chr4_3:6689607-6689626 | Msa0626710:CDS | 40.0% | |
| TCTGGTCTCCAATAATGGTA+AGG | - | chr4_3:6689634-6689653 | None:intergenic | 40.0% | |
| ! | AGAGTTCTGGTCTCCAATAA+TGG | - | chr4_3:6689639-6689658 | None:intergenic | 40.0% |
| AGATTTGAACGGAGAAACGA+TGG | + | chr4_3:6689792-6689811 | Msa0626710:CDS | 40.0% | |
| ! | TGCAAGAAGGTGCAACAAAA+AGG | + | chr4_3:6689872-6689891 | Msa0626710:CDS | 40.0% |
| ! | GCAAGAAGGTGCAACAAAAA+GGG | + | chr4_3:6689873-6689892 | Msa0626710:CDS | 40.0% |
| CTTTCGGAGACTTTAATGCT+TGG | - | chr4_3:6690126-6690145 | None:intergenic | 40.0% | |
| ATCATAAGCAATCTTCCAGG+AGG | + | chr4_3:6690411-6690430 | Msa0626710:CDS | 40.0% | |
| !! | CAAAGGTGGCTTGTTAACAA+GGG | - | chr4_3:6690523-6690542 | None:intergenic | 40.0% |
| !! | TCAAAGGTGGCTTGTTAACA+AGG | - | chr4_3:6690524-6690543 | None:intergenic | 40.0% |
| CTTGGTATGCTTCCATTAGT+AGG | - | chr4_3:6690606-6690625 | None:intergenic | 40.0% | |
| GTTGCATATGAATCATCGGT+TGG | + | chr4_3:6690711-6690730 | Msa0626710:CDS | 40.0% | |
| ! | TATGAATCATCGGTTGGATC+GGG | + | chr4_3:6690717-6690736 | Msa0626710:CDS | 40.0% |
| GTGTAACGCGTTATAACCAA+TGG | - | chr4_3:6690744-6690763 | None:intergenic | 40.0% | |
| CGTTACACCGAATTGATGAA+TGG | + | chr4_3:6690756-6690775 | Msa0626710:CDS | 40.0% | |
| GAATGGAATTATAGACTCGG+AGG | + | chr4_3:6690773-6690792 | Msa0626710:CDS | 40.0% | |
| GAAGTTGCTGATATGTGGAA+TGG | + | chr4_3:6690855-6690874 | Msa0626710:CDS | 40.0% | |
| !! | GGACCAATTGCAACTTGTTG+TGG | - | chr4_3:6689613-6689632 | None:intergenic | 45.0% |
| !! | GGACCAATTGCAACTTGTTG+TGG | - | chr4_3:6689613-6689632 | None:intergenic | 45.0% |
| TGAACGGAGAAACGATGGTG+TGG | + | chr4_3:6689797-6689816 | Msa0626710:CDS | 50.0% | |
| TGAACGGAGAAACGATGGTG+TGG | + | chr4_3:6689797-6689816 | Msa0626710:CDS | 50.0% | |
| ATCGGTTGGATCGGGACCAT+TGG | + | chr4_3:6690725-6690744 | Msa0626710:CDS | 55.0% | |
| ATCGGTTGGATCGGGACCAT+TGG | + | chr4_3:6690725-6690744 | Msa0626710:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 6689430 | 6691124 | 6689430 | ID=Msa0626710;Name=Msa0626710 |
| chr4_3 | mRNA | 6689430 | 6691124 | 6689430 | ID=Msa0626710-mRNA-1;Parent=Msa0626710;Name=Msa0626710-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|564 |
| chr4_3 | exon | 6689430 | 6691124 | 6689430 | ID=Msa0626710-mRNA-1:exon:1892;Parent=Msa0626710-mRNA-1 |
| chr4_3 | CDS | 6689430 | 6691124 | 6689430 | ID=Msa0626710-mRNA-1:cds;Parent=Msa0626710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
