Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089740 | AES86950.1 | 62.963 | 486 | 92 | 10 | 1 | 418 | 18 | 483 | 0.0 | 538 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089740 | G7JQ74 | 62.963 | 486 | 92 | 10 | 1 | 418 | 18 | 483 | 0.0 | 538 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa1089740 | -0.811227 | 7.781269e-51 | -8.615850e-47 |
| Msa0008840 | Msa1089740 | -0.821822 | 3.290594e-53 | -8.615850e-47 |
| Msa0021090 | Msa1089740 | 0.802458 | 5.557220e-49 | -8.615850e-47 |
| Msa0033880 | Msa1089740 | -0.818492 | 1.905569e-52 | -8.615850e-47 |
| Msa0036370 | Msa1089740 | -0.818453 | 1.944795e-52 | -8.615850e-47 |
| Msa0047250 | Msa1089740 | -0.816667 | 4.913544e-52 | -8.615850e-47 |
| Msa0055150 | Msa1089740 | -0.807615 | 4.634809e-50 | -8.615850e-47 |
| Msa0057750 | Msa1089740 | -0.801127 | 1.042559e-48 | -8.615850e-47 |
| Msa0065010 | Msa1089740 | -0.800360 | 1.495038e-48 | -8.615850e-47 |
| Msa0077540 | Msa1089740 | -0.803712 | 3.057866e-49 | -8.615850e-47 |
| Msa0077900 | Msa1089740 | -0.808697 | 2.726358e-50 | -8.615850e-47 |
| Msa0095360 | Msa1089740 | -0.809495 | 1.840017e-50 | -8.615850e-47 |
| Msa0095770 | Msa1089740 | -0.804036 | 2.619209e-49 | -8.615850e-47 |
| Msa0100800 | Msa1089740 | -0.830035 | 3.683227e-55 | -8.615850e-47 |
| Msa0101180 | Msa1089740 | -0.809938 | 1.477461e-50 | -8.615850e-47 |
| Msa0103070 | Msa1089740 | -0.802065 | 6.694099e-49 | -8.615850e-47 |
| Msa0103790 | Msa1089740 | -0.812486 | 4.138861e-51 | -8.615850e-47 |
| Msa0115370 | Msa1089740 | -0.803278 | 3.762673e-49 | -8.615850e-47 |
| Msa0618200 | Msa1089740 | 0.817079 | 3.971565e-52 | -8.615850e-47 |
| Msa0618930 | Msa1089740 | -0.822922 | 1.827875e-53 | -8.615850e-47 |
| Msa0620330 | Msa1089740 | -0.828333 | 9.527480e-55 | -8.615850e-47 |
| Msa0624550 | Msa1089740 | 0.954115 | 6.098877e-112 | -8.615850e-47 |
| Msa0629120 | Msa1089740 | 0.805454 | 1.324478e-49 | -8.615850e-47 |
| Msa0646130 | Msa1089740 | -0.817527 | 3.148223e-52 | -8.615850e-47 |
| Msa0658480 | Msa1089740 | -0.817362 | 3.429865e-52 | -8.615850e-47 |
| Msa0662630 | Msa1089740 | -0.802681 | 4.999363e-49 | -8.615850e-47 |
| Msa0668460 | Msa1089740 | 0.919415 | 4.633438e-87 | -8.615850e-47 |
| Msa0706390 | Msa1089740 | -0.804661 | 1.941008e-49 | -8.615850e-47 |
| Msa0720370 | Msa1089740 | -0.807039 | 6.141705e-50 | -8.615850e-47 |
| Msa0736570 | Msa1089740 | -0.800090 | 1.696336e-48 | -8.615850e-47 |
| Msa0742510 | Msa1089740 | -0.810217 | 1.286270e-50 | -8.615850e-47 |
| Msa0743530 | Msa1089740 | -0.824865 | 6.402822e-54 | -8.615850e-47 |
| Msa0744090 | Msa1089740 | -0.815976 | 7.015506e-52 | -8.615850e-47 |
| Msa0744100 | Msa1089740 | -0.808648 | 2.793042e-50 | -8.615850e-47 |
| Msa0756930 | Msa1089740 | -0.804176 | 2.449550e-49 | -8.615850e-47 |
| Msa0766670 | Msa1089740 | -0.825722 | 4.013613e-54 | -8.615850e-47 |
| Msa0780880 | Msa1089740 | -0.809920 | 1.490938e-50 | -8.615850e-47 |
| Msa0781270 | Msa1089740 | -0.806129 | 9.557082e-50 | -8.615850e-47 |
| Msa0781710 | Msa1089740 | -0.820434 | 6.872866e-53 | -8.615850e-47 |
| Msa0814250 | Msa1089740 | -0.815198 | 1.045460e-51 | -8.615850e-47 |
| Msa0820530 | Msa1089740 | 0.805228 | 1.477564e-49 | -8.615850e-47 |
| Msa0822170 | Msa1089740 | -0.853348 | 2.536702e-61 | -8.615850e-47 |
| Msa0822180 | Msa1089740 | -0.824831 | 6.522178e-54 | -8.615850e-47 |
| Msa0825270 | Msa1089740 | -0.819403 | 1.183125e-52 | -8.615850e-47 |
| Msa0825280 | Msa1089740 | -0.814414 | 1.559575e-51 | -8.615850e-47 |
| Msa0126840 | Msa1089740 | -0.814639 | 1.390355e-51 | -8.615850e-47 |
| Msa0126880 | Msa1089740 | -0.825943 | 3.557679e-54 | -8.615850e-47 |
| Msa0127040 | Msa1089740 | -0.808064 | 3.721375e-50 | -8.615850e-47 |
| Msa0127850 | Msa1089740 | -0.822150 | 2.763604e-53 | -8.615850e-47 |
| Msa0131450 | Msa1089740 | -0.814438 | 1.540689e-51 | -8.615850e-47 |
| Msa0166750 | Msa1089740 | -0.834133 | 3.573943e-56 | -8.615850e-47 |
| Msa0174000 | Msa1089740 | -0.830082 | 3.588455e-55 | -8.615850e-47 |
| Msa0175200 | Msa1089740 | -0.812044 | 5.168555e-51 | -8.615850e-47 |
| Msa0177270 | Msa1089740 | -0.804933 | 1.702962e-49 | -8.615850e-47 |
| Msa0186310 | Msa1089740 | -0.807079 | 6.022484e-50 | -8.615850e-47 |
| Msa0198530 | Msa1089740 | -0.806505 | 7.963108e-50 | -8.615850e-47 |
| Msa0212750 | Msa1089740 | 0.800787 | 1.223574e-48 | -8.615850e-47 |
| Msa0219250 | Msa1089740 | 0.805251 | 1.460613e-49 | -8.615850e-47 |
| Msa0227310 | Msa1089740 | 0.831343 | 1.761334e-55 | -8.615850e-47 |
| Msa0229360 | Msa1089740 | -0.818403 | 1.996591e-52 | -8.615850e-47 |
| Msa0370160 | Msa1089740 | 0.827032 | 1.956528e-54 | -8.615850e-47 |
| Msa0384880 | Msa1089740 | -0.828066 | 1.104911e-54 | -8.615850e-47 |
| Msa0386040 | Msa1089740 | -0.805029 | 1.626262e-49 | -8.615850e-47 |
| Msa0387880 | Msa1089740 | 0.835025 | 2.133258e-56 | -8.615850e-47 |
| Msa0387910 | Msa1089740 | -0.802802 | 4.719895e-49 | -8.615850e-47 |
| Msa0419520 | Msa1089740 | -0.801054 | 1.079167e-48 | -8.615850e-47 |
| Msa0436200 | Msa1089740 | -0.808137 | 3.590448e-50 | -8.615850e-47 |
| Msa0437690 | Msa1089740 | 0.813253 | 2.811004e-51 | -8.615850e-47 |
| Msa0439890 | Msa1089740 | -0.857705 | 1.360273e-62 | -8.615850e-47 |
| Msa0467260 | Msa1089740 | 0.830932 | 2.222924e-55 | -8.615850e-47 |
| Msa0474700 | Msa1089740 | -0.827163 | 1.820296e-54 | -8.615850e-47 |
| Msa0478580 | Msa1089740 | -0.824423 | 8.136752e-54 | -8.615850e-47 |
| Msa0981430 | Msa1089740 | -0.825174 | 5.413860e-54 | -8.615850e-47 |
| Msa1010460 | Msa1089740 | -0.807555 | 4.773819e-50 | -8.615850e-47 |
| Msa1025940 | Msa1089740 | -0.824221 | 9.079539e-54 | -8.615850e-47 |
| Msa1030930 | Msa1089740 | -0.814199 | 1.740006e-51 | -8.615850e-47 |
| Msa1048760 | Msa1089740 | 0.802852 | 4.608171e-49 | -8.615850e-47 |
| Msa1070050 | Msa1089740 | -0.825110 | 5.605772e-54 | -8.615850e-47 |
| Msa1070390 | Msa1089740 | -0.815090 | 1.104484e-51 | -8.615850e-47 |
| Msa1083880 | Msa1089740 | -0.811774 | 5.917701e-51 | -8.615850e-47 |
| Msa1087510 | Msa1089740 | 0.803398 | 3.553979e-49 | -8.615850e-47 |
| Msa1088250 | Msa1089740 | 0.817270 | 3.596800e-52 | -8.615850e-47 |
| Msa1089740 | Msa1094540 | 0.811763 | 5.950292e-51 | -8.615850e-47 |
| Msa1089740 | Msa1100530 | 0.837706 | 4.436093e-57 | -8.615850e-47 |
| Msa1089740 | Msa1114040 | -0.801027 | 1.093003e-48 | -8.615850e-47 |
| Msa1089740 | Msa1120810 | -0.813293 | 2.754301e-51 | -8.615850e-47 |
| Msa1089740 | Msa1125790 | 0.801924 | 7.157079e-49 | -8.615850e-47 |
| Msa1089740 | Msa1135800 | 0.807418 | 5.104969e-50 | -8.615850e-47 |
| Msa1089740 | Msa1135810 | 0.833327 | 5.683089e-56 | -8.615850e-47 |
| Msa1089740 | Msa1141300 | 0.802643 | 5.089610e-49 | -8.615850e-47 |
| Msa1089740 | Msa1166870 | -0.804677 | 1.926022e-49 | -8.615850e-47 |
| Msa1089740 | Msa1172130 | 0.812270 | 4.612325e-51 | -8.615850e-47 |
| Msa1089740 | Msa1176980 | -0.806384 | 8.445628e-50 | -8.615850e-47 |
| Msa1089740 | Msa1181170 | 0.829708 | 4.426441e-55 | -8.615850e-47 |
| Msa1089740 | Msa1201830 | -0.804621 | 1.978846e-49 | -8.615850e-47 |
| Msa1089740 | Msa1203900 | -0.811260 | 7.651187e-51 | -8.615850e-47 |
| Msa1089740 | Msa1206650 | -0.816377 | 5.705186e-52 | -8.615850e-47 |
| Msa1089740 | Msa1211050 | 0.824791 | 6.666487e-54 | -8.615850e-47 |
| Msa1089740 | Msa1226610 | -0.826436 | 2.715165e-54 | -8.615850e-47 |
| Msa1089740 | Msa1253810 | -0.824856 | 6.434831e-54 | -8.615850e-47 |
| Msa1089740 | Msa1303580 | -0.809414 | 1.914800e-50 | -8.615850e-47 |
| Msa1089740 | Msa1310690 | -0.809508 | 1.827458e-50 | -8.615850e-47 |
| Msa1089740 | Msa1340830 | -0.818779 | 1.640114e-52 | -8.615850e-47 |
| Msa1089740 | Msa1363700 | -0.806997 | 6.267575e-50 | -8.615850e-47 |
| Msa1089740 | Msa1365860 | -0.817326 | 3.494994e-52 | -8.615850e-47 |
| Msa1089740 | Msa1416260 | -0.818194 | 2.226510e-52 | -8.615850e-47 |
| Msa1089740 | Msa1418960 | 0.806530 | 7.867202e-50 | -8.615850e-47 |
| Msa0251770 | Msa1089740 | -0.814540 | 1.462851e-51 | -8.615850e-47 |
| Msa0258880 | Msa1089740 | 0.803915 | 2.775267e-49 | -8.615850e-47 |
| Msa0265160 | Msa1089740 | -0.844127 | 9.163044e-59 | -8.615850e-47 |
| Msa0269470 | Msa1089740 | -0.802634 | 5.110968e-49 | -8.615850e-47 |
| Msa0291520 | Msa1089740 | -0.817438 | 3.297693e-52 | -8.615850e-47 |
| Msa0505380 | Msa1089740 | -0.803008 | 4.279301e-49 | -8.615850e-47 |
| Msa0509950 | Msa1089740 | 0.805769 | 1.137539e-49 | -8.615850e-47 |
| Msa0530870 | Msa1089740 | 0.815498 | 8.962954e-52 | -8.615850e-47 |
| Msa0533960 | Msa1089740 | 0.977488 | 6.992065e-144 | -8.615850e-47 |
| Msa0534080 | Msa1089740 | -0.803251 | 3.810347e-49 | -8.615850e-47 |
| Msa0550570 | Msa1089740 | -0.824491 | 7.845066e-54 | -8.615850e-47 |
| Msa0586850 | Msa1089740 | -0.800379 | 1.481779e-48 | -8.615850e-47 |
| Msa0590650 | Msa1089740 | -0.800471 | 1.419340e-48 | -8.615850e-47 |
| Msa0846400 | Msa1089740 | -0.811916 | 5.510808e-51 | -8.615850e-47 |
| Msa0851470 | Msa1089740 | -0.810864 | 9.326120e-51 | -8.615850e-47 |
| Msa0865570 | Msa1089740 | -0.812550 | 4.007190e-51 | -8.615850e-47 |
| Msa0869010 | Msa1089740 | -0.802801 | 4.722247e-49 | -8.615850e-47 |
| Msa0921870 | Msa1089740 | -0.824182 | 9.272273e-54 | -8.615850e-47 |
| Msa0924150 | Msa1089740 | 0.831617 | 1.508205e-55 | -8.615850e-47 |
| Msa0943270 | Msa1089740 | -0.809451 | 1.880106e-50 | -8.615850e-47 |
| Msa0947800 | Msa1089740 | -0.809853 | 1.540550e-50 | -8.615850e-47 |
| Msa0960830 | Msa1089740 | -0.814267 | 1.681022e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089740 | MtrunA17_Chr4g0007631 | 57.764 | 483 | 130 | 11 | 1 | 415 | 21 | 497 | 6.23e-168 | 489 |
| Msa1089740 | MtrunA17_Chr4g0008481 | 57.287 | 494 | 129 | 12 | 1 | 418 | 18 | 505 | 3.95e-165 | 482 |
| Msa1089740 | MtrunA17_Chr4g0007251 | 57.292 | 480 | 116 | 11 | 1 | 418 | 23 | 475 | 3.62e-153 | 449 |
| Msa1089740 | MtrunA17_Chr4g0007341 | 56.954 | 453 | 122 | 12 | 1 | 397 | 22 | 457 | 7.09e-152 | 446 |
| Msa1089740 | MtrunA17_Chr4g0007271 | 55.258 | 485 | 114 | 10 | 1 | 418 | 21 | 469 | 1.84e-146 | 432 |
| Msa1089740 | MtrunA17_Chr4g0007231 | 75.238 | 210 | 33 | 4 | 1 | 192 | 18 | 226 | 5.55e-100 | 303 |
| Msa1089740 | MtrunA17_Chr4g0007321 | 58.909 | 275 | 61 | 6 | 191 | 415 | 11 | 283 | 1.25e-88 | 276 |
| Msa1089740 | MtrunA17_Chr4g0008511 | 37.630 | 481 | 223 | 16 | 1 | 415 | 17 | 486 | 1.28e-76 | 252 |
| Msa1089740 | MtrunA17_Chr4g0007221 | 50.000 | 238 | 50 | 6 | 231 | 418 | 1 | 219 | 1.01e-54 | 186 |
| Msa1089740 | MtrunA17_Chr7g0241421 | 30.220 | 546 | 288 | 20 | 1 | 479 | 23 | 542 | 4.11e-41 | 157 |
| Msa1089740 | MtrunA17_Chr7g0239911 | 29.851 | 469 | 230 | 16 | 1 | 397 | 19 | 460 | 4.77e-41 | 155 |
| Msa1089740 | MtrunA17_Chr7g0241261 | 30.612 | 441 | 220 | 17 | 1 | 397 | 18 | 416 | 1.33e-37 | 145 |
| Msa1089740 | MtrunA17_Chr7g0241251 | 28.571 | 448 | 232 | 16 | 1 | 397 | 21 | 431 | 4.18e-36 | 140 |
| Msa1089740 | MtrunA17_Chr4g0007311 | 57.377 | 122 | 39 | 3 | 82 | 194 | 7 | 124 | 2.08e-35 | 130 |
| Msa1089740 | MtrunA17_Chr7g0237451 | 28.898 | 481 | 241 | 18 | 1 | 415 | 21 | 466 | 2.32e-35 | 139 |
| Msa1089740 | MtrunA17_Chr7g0241331 | 28.455 | 492 | 272 | 16 | 1 | 425 | 13 | 491 | 2.37e-35 | 139 |
| Msa1089740 | MtrunA17_Chr7g0239731 | 30.426 | 470 | 258 | 15 | 1 | 418 | 18 | 470 | 9.36e-35 | 137 |
| Msa1089740 | MtrunA17_Chr7g0241161 | 29.412 | 459 | 221 | 17 | 1 | 415 | 24 | 423 | 8.70e-33 | 130 |
| Msa1089740 | MtrunA17_Chr7g0238971 | 30.208 | 480 | 245 | 19 | 1 | 418 | 21 | 472 | 1.02e-32 | 131 |
| Msa1089740 | MtrunA17_Chr1g0166321 | 30.197 | 457 | 237 | 19 | 1 | 403 | 23 | 451 | 1.31e-32 | 131 |
| Msa1089740 | MtrunA17_Chr7g0241431 | 28.719 | 484 | 241 | 18 | 2 | 421 | 5 | 448 | 3.44e-31 | 126 |
| Msa1089740 | MtrunA17_Chr7g0238961 | 28.543 | 508 | 239 | 19 | 1 | 418 | 274 | 747 | 1.02e-30 | 128 |
| Msa1089740 | MtrunA17_Chr7g0238961 | 24.308 | 506 | 269 | 21 | 1 | 413 | 19 | 503 | 2.02e-13 | 73.6 |
| Msa1089740 | MtrunA17_Chr7g0239921 | 27.601 | 471 | 265 | 15 | 1 | 418 | 46 | 493 | 1.07e-30 | 126 |
| Msa1089740 | MtrunA17_Chr7g0218371 | 28.601 | 486 | 220 | 19 | 1 | 422 | 23 | 445 | 3.83e-30 | 123 |
| Msa1089740 | MtrunA17_Chr7g0239851 | 28.542 | 480 | 253 | 18 | 1 | 418 | 19 | 470 | 7.81e-30 | 123 |
| Msa1089740 | MtrunA17_Chr7g0239901 | 28.448 | 464 | 234 | 17 | 1 | 393 | 47 | 483 | 6.35e-29 | 120 |
| Msa1089740 | MtrunA17_Chr7g0239891 | 27.930 | 512 | 243 | 23 | 1 | 418 | 20 | 499 | 4.11e-28 | 118 |
| Msa1089740 | MtrunA17_Chr3g0078631 | 27.489 | 462 | 251 | 13 | 2 | 418 | 32 | 454 | 3.62e-26 | 112 |
| Msa1089740 | MtrunA17_Chr7g0239831 | 29.253 | 482 | 254 | 21 | 1 | 418 | 19 | 477 | 3.23e-25 | 109 |
| Msa1089740 | MtrunA17_Chr7g0241291 | 30.104 | 289 | 156 | 8 | 163 | 415 | 34 | 312 | 1.64e-24 | 104 |
| Msa1089740 | MtrunA17_Chr4g0008491 | 28.533 | 368 | 173 | 11 | 77 | 420 | 4 | 305 | 8.33e-23 | 99.4 |
| Msa1089740 | MtrunA17_Chr7g0241201 | 30.028 | 353 | 187 | 11 | 1 | 308 | 24 | 361 | 2.33e-22 | 99.4 |
| Msa1089740 | MtrunA17_Chr2g0291981 | 47.788 | 113 | 42 | 6 | 1 | 108 | 23 | 123 | 6.07e-20 | 86.7 |
| Msa1089740 | MtrunA17_Chr7g0239841 | 26.636 | 428 | 239 | 16 | 1 | 372 | 19 | 427 | 1.93e-19 | 91.3 |
| Msa1089740 | MtrunA17_Chr7g0239791 | 29.670 | 273 | 144 | 7 | 179 | 418 | 13 | 270 | 1.60e-18 | 86.3 |
| Msa1089740 | MtrunA17_Chr7g0241271 | 30.625 | 320 | 171 | 14 | 1 | 284 | 23 | 327 | 1.16e-17 | 84.7 |
| Msa1089740 | MtrunA17_Chr7g0241311 | 40.141 | 142 | 61 | 7 | 1 | 130 | 19 | 148 | 1.60e-16 | 79.7 |
| Msa1089740 | MtrunA17_Chr7g0241511 | 30.483 | 269 | 136 | 9 | 176 | 399 | 44 | 306 | 5.08e-15 | 77.0 |
| Msa1089740 | MtrunA17_Chr7g0241211 | 30.000 | 200 | 114 | 4 | 227 | 415 | 2 | 186 | 3.32e-14 | 71.6 |
| Msa1089740 | MtrunA17_Chr7g0241171 | 32.051 | 156 | 82 | 3 | 269 | 415 | 3 | 143 | 6.48e-14 | 69.7 |
| Msa1089740 | MtrunA17_Chr7g0263451 | 29.304 | 273 | 131 | 11 | 191 | 415 | 2 | 260 | 3.59e-13 | 70.1 |
| Msa1089740 | MtrunA17_Chr7g0241361 | 29.646 | 226 | 104 | 10 | 4 | 211 | 28 | 216 | 6.55e-13 | 69.3 |
| Msa1089740 | MtrunA17_Chr7g0241231 | 34.722 | 144 | 67 | 8 | 1 | 130 | 16 | 146 | 7.66e-12 | 63.5 |
| Msa1089740 | MtrunA17_Chr7g0241321 | 30.978 | 184 | 95 | 3 | 264 | 415 | 1 | 184 | 6.58e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089740 | AT5G01120.1 | 28.684 | 509 | 270 | 22 | 1 | 438 | 18 | 504 | 6.26e-34 | 136 |
| Msa1089740 | AT5G01130.1 | 29.581 | 453 | 257 | 16 | 1 | 418 | 18 | 443 | 5.54e-32 | 129 |
| Msa1089740 | AT5G01150.1 | 28.721 | 477 | 265 | 18 | 1 | 418 | 18 | 478 | 3.63e-30 | 125 |
| Msa1089740 | AT3G09140.2 | 28.827 | 503 | 256 | 23 | 4 | 426 | 21 | 501 | 6.35e-29 | 121 |
| Msa1089740 | AT5G43240.1 | 28.571 | 518 | 256 | 23 | 1 | 434 | 18 | 505 | 5.16e-28 | 118 |
| Msa1089740 | AT5G43240.3 | 28.571 | 518 | 256 | 23 | 1 | 434 | 18 | 505 | 5.16e-28 | 118 |
| Msa1089740 | AT5G43240.4 | 28.571 | 518 | 256 | 23 | 1 | 434 | 18 | 505 | 5.16e-28 | 118 |
| Msa1089740 | AT5G01140.1 | 29.464 | 448 | 233 | 16 | 28 | 418 | 29 | 450 | 6.17e-27 | 115 |
| Msa1089740 | AT3G09140.1 | 27.307 | 531 | 256 | 24 | 4 | 426 | 21 | 529 | 2.79e-24 | 107 |
| Msa1089740 | AT5G37320.1 | 26.471 | 476 | 267 | 18 | 6 | 418 | 23 | 478 | 4.55e-22 | 100 |
| Msa1089740 | AT3G09110.1 | 30.841 | 321 | 167 | 17 | 1 | 285 | 18 | 319 | 1.11e-18 | 88.2 |
| Msa1089740 | AT3G09120.1 | 29.688 | 320 | 161 | 16 | 1 | 277 | 15 | 313 | 3.36e-17 | 83.6 |
Find 156 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACTCCTTCCTTCAATTT+TGG | 0.106178 | 7_3:-3380710 | Msa1089740:CDS |
| TCTTCTCCTTCCTTCAATTT+TGG | 0.107419 | 7_3:-3380671 | Msa1089740:CDS |
| AAATCAACTGCCTCAAAATT+TGG | 0.108204 | 7_3:-3382612 | Msa1089740:CDS |
| CCAGAAACTTGAATCCATTT+TGG | 0.133453 | 7_3:+3382552 | None:intergenic |
| CCAAAATGGATTCAAGTTTC+TGG | 0.178569 | 7_3:-3382552 | Msa1089740:intron |
| GCCTCTCACAAATACAATTT+TGG | 0.184722 | 7_3:-3381703 | Msa1089740:CDS |
| GAACACCCTACTTATTATTA+TGG | 0.206601 | 7_3:-3381331 | Msa1089740:intron |
| CCATCCTTTGGATTTGGTTT+TGG | 0.223261 | 7_3:-3380166 | Msa1089740:CDS |
| CTTGCAGCTGTTGATGGAAT+TGG | 0.234153 | 7_3:-3382486 | Msa1089740:CDS |
| GCGGCTTCTATTCCGTCTTT+TGG | 0.262865 | 7_3:-3380328 | Msa1089740:CDS |
| AGGTGGGTTGTCTTTAGTTT+TGG | 0.263794 | 7_3:+3381671 | None:intergenic |
| GAGGCTTCTATGCTGTCTTT+TGG | 0.288076 | 7_3:-3380358 | Msa1089740:CDS |
| TTGGCTTCAAATGCGGCTTC+AGG | 0.290225 | 7_3:-3380512 | Msa1089740:CDS |
| TTGATCATTGTTGCTGTTGA+TGG | 0.292170 | 7_3:+3382904 | None:intergenic |
| CATCGGCTTCGACACCGTTT+TGG | 0.297343 | 7_3:-3380424 | Msa1089740:CDS |
| GCAAAGTAAATCTCAGAAAA+AGG | 0.300596 | 7_3:-3381577 | Msa1089740:intron |
| GCTTCGTGTAGGCCGTCTTT+TGG | 0.318681 | 7_3:-3380388 | Msa1089740:CDS |
| TCTATGCCATCCTTTGGATT+TGG | 0.328976 | 7_3:-3380172 | Msa1089740:CDS |
| ACCTATACTCAGACGATGTT+TGG | 0.330791 | 7_3:-3382814 | Msa1089740:CDS |
| GACTTACTTGCAGCTGTTGA+TGG | 0.339065 | 7_3:-3382492 | Msa1089740:CDS |
| GCCACCGTTGGCTCGCTGTT+TGG | 0.353028 | 7_3:-3380578 | Msa1089740:CDS |
| TAGCTTCCTTACATGCCATT+AGG | 0.353129 | 7_3:-3381511 | Msa1089740:CDS |
| TTGCAGCTGTTGATGGAATT+GGG | 0.365599 | 7_3:-3382485 | Msa1089740:CDS |
| ATTGAAGGAAGGAGTTGTTC+TGG | 0.370835 | 7_3:+3380715 | None:intergenic |
| CATCGTCTGAGTATAGGTTT+TGG | 0.372178 | 7_3:+3382819 | None:intergenic |
| GCGGCTTCAGGGTCGTCATT+TGG | 0.375302 | 7_3:-3380500 | Msa1089740:CDS |
| GAGGCTTCTACACCGTCATT+TGG | 0.380541 | 7_3:-3380268 | Msa1089740:CDS |
| GCAGCTTCTACGCCGTTGTT+TGG | 0.381264 | 7_3:-3380238 | Msa1089740:CDS |
| TGCTGTTGATGGTGGCTAAA+AGG | 0.392005 | 7_3:+3382915 | None:intergenic |
| AATAGTGCGGATGCCCAAAA+TGG | 0.394854 | 7_3:-3382566 | Msa1089740:CDS |
| GTGTAGGCTTTGAACTTCCT+TGG | 0.395429 | 7_3:-3380990 | Msa1089740:intron |
| GCGGATTCTATGCCATCCTT+TGG | 0.396658 | 7_3:-3380178 | Msa1089740:CDS |
| GGATTGAGTAACACAGAAAC+CGG | 0.407217 | 7_3:+3381409 | None:intergenic |
| CCGTTTAGAGTACCGTCCTT+TGG | 0.417578 | 7_3:-3380455 | Msa1089740:CDS |
| TTCTGGAAGAGGAAGGAGAT+GGG | 0.430201 | 7_3:+3380732 | None:intergenic |
| ACAGCTTCTACACCGTCGTT+TGG | 0.433226 | 7_3:-3380298 | Msa1089740:CDS |
| CCTGTACCATAATAATAAGT+AGG | 0.434424 | 7_3:+3381325 | None:intergenic |
| CAGAAGTAAAATCGATGTTA+AGG | 0.436014 | 7_3:-3381604 | Msa1089740:CDS |
| ATTTGTGAGAGGCTCATTAG+AGG | 0.437734 | 7_3:+3381713 | None:intergenic |
| CCTGGTATAGCACCACAGTT+TGG | 0.441678 | 7_3:-3381388 | Msa1089740:CDS |
| GGAAGGAGTTGTTCTGGAAG+AGG | 0.442032 | 7_3:+3380721 | None:intergenic |
| TGGCTTCAAATGCGGCTTCA+GGG | 0.442560 | 7_3:-3380511 | Msa1089740:CDS |
| GAGAGGCTCATTAGAGGTTA+AGG | 0.444319 | 7_3:+3381719 | None:intergenic |
| GGAATGTTGAGTGGCTGGTT+TGG | 0.446551 | 7_3:+3381361 | None:intergenic |
| ATGGATCCTAATGGCATGTA+AGG | 0.452973 | 7_3:+3381505 | None:intergenic |
| GCCTCAAAATTTGGATTCTG+AGG | 0.458830 | 7_3:-3382603 | Msa1089740:CDS |
| ACACATCCAGCAAAAGAGTT+AGG | 0.466364 | 7_3:+3381466 | None:intergenic |
| GTTTCTGTGTTACTCAATCC+TGG | 0.470852 | 7_3:-3381406 | Msa1089740:CDS |
| ATTAACCTTGACTGATGGAC+TGG | 0.473962 | 7_3:-3380949 | Msa1089740:CDS |
| GGATCCATTGTAAAGCTTGT+GGG | 0.479392 | 7_3:-3381490 | Msa1089740:CDS |
| GTCGTCATTTGGAGCATCAC+CGG | 0.483099 | 7_3:-3380489 | Msa1089740:CDS |
| AAACAGCGAGCCAACGGTGG+CGG | 0.487139 | 7_3:+3380580 | None:intergenic |
| TGGTGCCAAGTGGAAGAGAT+AGG | 0.487529 | 7_3:+3382945 | None:intergenic |
| CCTTGGGTTCAGTGCAATCA+AGG | 0.487808 | 7_3:+3381273 | None:intergenic |
| TCAGTGCAATCAAGGACCTT+GGG | 0.489701 | 7_3:+3381281 | None:intergenic |
| GGAAGGAGATGGGAAGAAAG+AGG | 0.490171 | 7_3:+3380742 | None:intergenic |
| AGCTTTACAATGGATCCTAA+TGG | 0.492466 | 7_3:+3381496 | None:intergenic |
| ACCGTTGGCTCGCTGTTTGG+TGG | 0.493527 | 7_3:-3380575 | Msa1089740:CDS |
| CCTGAGGAATGTTGAGTGGC+TGG | 0.493538 | 7_3:+3381356 | None:intergenic |
| ACTGTTGATGCAGATTGCTT+AGG | 0.493675 | 7_3:+3381651 | None:intergenic |
| CAAAACATTCATCGCACTTG+TGG | 0.494288 | 7_3:-3382644 | Msa1089740:CDS |
| CCAAAGGACGGTACTCTAAA+CGG | 0.496179 | 7_3:+3380455 | None:intergenic |
| AGGTCAAAAGAAGGTGTTGT+GGG | 0.497682 | 7_3:-3381241 | Msa1089740:CDS |
| CCAAACTGTGGTGCTATACC+AGG | 0.500141 | 7_3:+3381388 | None:intergenic |
| TCCAAACATCGTCTGAGTAT+AGG | 0.500615 | 7_3:+3382813 | None:intergenic |
| GGAGTTGTTCTGGAAGAGGA+AGG | 0.501966 | 7_3:+3380725 | None:intergenic |
| AGCTTCCTATCTCTTCCACT+TGG | 0.503728 | 7_3:-3382950 | Msa1089740:CDS |
| AGGAGAAGAACTAGCGGGAG+AGG | 0.504742 | 7_3:+3380685 | None:intergenic |
| CACACACAACATTGGCAAGC+AGG | 0.511161 | 7_3:-3382432 | Msa1089740:CDS |
| GCCGTTGTTTGGAGATTCAC+CGG | 0.513365 | 7_3:-3380227 | Msa1089740:CDS |
| GAGAGTGTCAACAAAATCCT+TGG | 0.515103 | 7_3:+3382976 | None:intergenic |
| TTCAGTGCAATCAAGGACCT+TGG | 0.515168 | 7_3:+3381280 | None:intergenic |
| GCCAAAATTGTATTTGTGAG+AGG | 0.515201 | 7_3:+3381702 | None:intergenic |
| TTACTTCTGTTACTGGTGCA+AGG | 0.520158 | 7_3:+3381618 | None:intergenic |
| CAGGAACATCAAAGAGAAAG+AGG | 0.520391 | 7_3:-3381306 | Msa1089740:CDS |
| AGGATCCATTGTAAAGCTTG+TGG | 0.523652 | 7_3:-3381491 | Msa1089740:CDS |
| AGCCGATGACGGTGCTCCAA+AGG | 0.526051 | 7_3:+3380439 | None:intergenic |
| TCAAAATTAACCTTGACTGA+TGG | 0.526140 | 7_3:-3380954 | Msa1089740:CDS |
| ATGGTGATGATTCTGAGGGT+TGG | 0.535301 | 7_3:+3382876 | None:intergenic |
| GTGGGATTTGTGAAGAGAGA+AGG | 0.537415 | 7_3:-3381223 | Msa1089740:CDS |
| ATCATTGTTGCTGTTGATGG+TGG | 0.539275 | 7_3:+3382907 | None:intergenic |
| GTTCTGGAAGAGGAAGGAGA+TGG | 0.541509 | 7_3:+3380731 | None:intergenic |
| AAGGAATGGTGATGATTCTG+AGG | 0.543097 | 7_3:+3382871 | None:intergenic |
| AGAGAAGGATTATATTGTGT+AGG | 0.548529 | 7_3:-3381208 | Msa1089740:CDS |
| CCGATGATGGTGCTCCAAAA+CGG | 0.556071 | 7_3:+3380410 | None:intergenic |
| GTTGATGCAGATTGCTTAGG+TGG | 0.556543 | 7_3:+3381654 | None:intergenic |
| CCTTGATTGCACTGAACCCA+AGG | 0.558804 | 7_3:-3381273 | Msa1089740:CDS |
| GTCCTTTGGAGCACCGTCAT+CGG | 0.559446 | 7_3:-3380441 | Msa1089740:CDS |
| GGCCTACACGAAGCCGATGA+TGG | 0.560032 | 7_3:+3380397 | None:intergenic |
| CTGTACCATAATAATAAGTA+GGG | 0.562506 | 7_3:+3381326 | None:intergenic |
| GCTGTCAGAGCTCCAAAAGA+CGG | 0.562631 | 7_3:+3380316 | None:intergenic |
| AAAGACAGCATAGAAGCCTC+TGG | 0.564575 | 7_3:+3380361 | None:intergenic |
| CAGTGTGGAGAACTTGAACC+CGG | 0.564774 | 7_3:-3381428 | Msa1089740:CDS |
| CCTCAAAATTTGGATTCTGA+GGG | 0.569344 | 7_3:-3382602 | Msa1089740:CDS |
| GGCGGACGATCCAAAATTGA+AGG | 0.571794 | 7_3:+3380661 | None:intergenic |
| TCAAACGAGGTTGAAGAAGC+CGG | 0.576667 | 7_3:+3380208 | None:intergenic |
| GGGAAGAAAGAGGAGGCAGA+AGG | 0.580646 | 7_3:+3380752 | None:intergenic |
| AGCAACATTGGCTTCAAATG+CGG | 0.582860 | 7_3:-3380519 | Msa1089740:CDS |
| GATAAGCATTGGTGAAGTTG+AGG | 0.584497 | 7_3:-3381092 | Msa1089740:intron |
| CCAGCCACTCAACATTCCTC+AGG | 0.585126 | 7_3:-3381356 | Msa1089740:CDS |
| TTGATGCAGATTGCTTAGGT+GGG | 0.586176 | 7_3:+3381655 | None:intergenic |
| AACAACGGCGTAGAAGCTGC+TGG | 0.587982 | 7_3:+3380241 | None:intergenic |
| CCAAAACCAAATCCAAAGGA+TGG | 0.589035 | 7_3:+3380166 | None:intergenic |
| CTAAACGGCGTTGAAGAAGC+CGG | 0.589830 | 7_3:+3380470 | None:intergenic |
| AGGAGATGGGAAGAAAGAGG+AGG | 0.589833 | 7_3:+3380745 | None:intergenic |
| AACGGTGTCGAAGCCGATGA+CGG | 0.591613 | 7_3:+3380428 | None:intergenic |
| CACCATCATCGGCTTCGTGT+AGG | 0.592082 | 7_3:-3380399 | Msa1089740:CDS |
| GGGAGAGGATCCAAAATTGA+AGG | 0.594588 | 7_3:+3380700 | None:intergenic |
| ACCACCAAACAGCGAGCCAA+CGG | 0.594640 | 7_3:+3380574 | None:intergenic |
| AAGGATGGCATAGAATCCGC+TGG | 0.601423 | 7_3:+3380181 | None:intergenic |
| GTCTCCCAGTCCATCAGTCA+AGG | 0.604290 | 7_3:+3380944 | None:intergenic |
| AGGTCCCACAAGCTTTACAA+TGG | 0.609111 | 7_3:+3381486 | None:intergenic |
| GACGATCCAAAATTGAAGGA+AGG | 0.611889 | 7_3:+3380665 | None:intergenic |
| TCATCCAAAACCAAATCCAA+AGG | 0.611960 | 7_3:+3380162 | None:intergenic |
| GCCTCTGGTGGTCCAAAAGA+CGG | 0.616315 | 7_3:+3380376 | None:intergenic |
| TGCAGCTGTTGATGGAATTG+GGG | 0.616569 | 7_3:-3382484 | Msa1089740:CDS |
| AAGGAAGGAGAAGAACTAGC+GGG | 0.616659 | 7_3:+3380680 | None:intergenic |
| CTTGAATGTTGATGATGACA+CGG | 0.619606 | 7_3:-3382720 | Msa1089740:CDS |
| GAGGAAGTCACACACAACAT+TGG | 0.621785 | 7_3:-3382440 | Msa1089740:CDS |
| AAAGACGGAATAGAAGCCGC+TGG | 0.621809 | 7_3:+3380331 | None:intergenic |
| CAAAGAGAAAGAGGGACCCA+AGG | 0.624400 | 7_3:-3381297 | Msa1089740:CDS |
| AAGTAAGTCACAGACGAACA+TGG | 0.624914 | 7_3:+3382506 | None:intergenic |
| GAGGATCCAAAATTGAAGGA+AGG | 0.626080 | 7_3:+3380704 | None:intergenic |
| GCCTCTGATGTTCCAAACGA+CGG | 0.626720 | 7_3:+3380286 | None:intergenic |
| CTTCAAGATCATCAAGAGGG+AGG | 0.629909 | 7_3:+3381122 | None:intergenic |
| TTAACCTTGACTGATGGACT+GGG | 0.633283 | 7_3:-3380948 | Msa1089740:CDS |
| TTCAGACTTGACTCAACTAG+AGG | 0.639443 | 7_3:-3382459 | Msa1089740:CDS |
| AACCTCGTTTGAAGCACCAG+CGG | 0.639449 | 7_3:-3380197 | Msa1089740:CDS |
| GCTGCTGGTGCTCCAAATGA+CGG | 0.639822 | 7_3:+3380256 | None:intergenic |
| TTCACTTCAAGATCATCAAG+AGG | 0.642125 | 7_3:+3381118 | None:intergenic |
| TTGATGTCAAGAATGCTCCA+AGG | 0.651294 | 7_3:+3380973 | None:intergenic |
| CAGGTCAAAAGAAGGTGTTG+TGG | 0.656062 | 7_3:-3381242 | Msa1089740:CDS |
| ACCAAACAGCGAGCCAACGG+TGG | 0.656980 | 7_3:+3380577 | None:intergenic |
| ATCCGCTGGTGCTTCAAACG+AGG | 0.659392 | 7_3:+3380195 | None:intergenic |
| TAAGTAGGGTGTTCAACCTG+AGG | 0.660168 | 7_3:+3381340 | None:intergenic |
| AGAAGGACAAGAAGTAGTTG+CGG | 0.661747 | 7_3:+3380769 | None:intergenic |
| GAAGGAAGGAGAAGAACTAG+CGG | 0.663240 | 7_3:+3380679 | None:intergenic |
| AGGACAAGAAGTAGTTGCGG+TGG | 0.664239 | 7_3:+3380772 | None:intergenic |
| GAAGTGAAGCTGATAAGCAT+TGG | 0.664925 | 7_3:-3381103 | Msa1089740:CDS |
| GCCGGTGAATCTCCAAACAA+CGG | 0.666513 | 7_3:+3380226 | None:intergenic |
| ACCGTCGTTTGGAACATCAG+AGG | 0.666816 | 7_3:-3380287 | Msa1089740:CDS |
| GGTGGCTAAAAGGCGGACAA+TGG | 0.668124 | 7_3:+3382925 | None:intergenic |
| AGGAACATCAAAGAGAAAGA+GGG | 0.669133 | 7_3:-3381305 | Msa1089740:CDS |
| TCACTTCAAGATCATCAAGA+GGG | 0.670300 | 7_3:+3381119 | None:intergenic |
| TCAAGAGAATAGTAATAGTG+CGG | 0.674033 | 7_3:-3382579 | Msa1089740:CDS |
| ACACAACATTGGCAAGCAGG+AGG | 0.678135 | 7_3:-3382429 | Msa1089740:intron |
| GATGACGGTGCTCCAAAGGA+CGG | 0.678623 | 7_3:+3380443 | None:intergenic |
| AGGCGGACAATGGTGCCAAG+TGG | 0.686421 | 7_3:+3382935 | None:intergenic |
| GACAGCATAGAAGCCTCTGG+TGG | 0.686956 | 7_3:+3380364 | None:intergenic |
| TGGTAATTTGTACAACAGTG+TGG | 0.689995 | 7_3:-3381443 | Msa1089740:CDS |
| TCAACCTGAGGAATGTTGAG+TGG | 0.701201 | 7_3:+3381352 | None:intergenic |
| GATTGAGTAACACAGAAACC+GGG | 0.708506 | 7_3:+3381410 | None:intergenic |
| AGGAATGGTGATGATTCTGA+GGG | 0.708623 | 7_3:+3382872 | None:intergenic |
| TTCATGCACAGTGATTCACA+TGG | 0.716552 | 7_3:+3382749 | None:intergenic |
| TGGTTTGGACAACCAAACTG+TGG | 0.745392 | 7_3:+3381376 | None:intergenic |
| TGTTGATGGTGGCTAAAAGG+CGG | 0.769976 | 7_3:+3382918 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAACAAAAAAAAAAAAAA+AGG | + | chr7_3:3381380-3381399 | None:intergenic | 10.0% |
| !!! | ACAATTAATTTTTATAAACT+TGG | + | chr7_3:3382131-3382150 | None:intergenic | 10.0% |
| !! | TTTATTGAGAATCTTTATTA+TGG | - | chr7_3:3380920-3380939 | Msa1089740:intron | 15.0% |
| !!! | TTTAAGATCTATTGAATTTT+GGG | + | chr7_3:3381102-3381121 | None:intergenic | 15.0% |
| !!! | ATTTAAGATCTATTGAATTT+TGG | + | chr7_3:3381103-3381122 | None:intergenic | 15.0% |
| !!! | ATATAATAAAAAAAGAGTAC+AGG | - | chr7_3:3381226-3381245 | Msa1089740:CDS | 15.0% |
| !!! | TCACAAATATATGATTTTAG+AGG | + | chr7_3:3380998-3381017 | None:intergenic | 20.0% |
| !!! | TTAAGATCTATTGAATTTTG+GGG | + | chr7_3:3381101-3381120 | None:intergenic | 20.0% |
| !!! | TTTTTTTGGTTTTGAAATTG+AGG | + | chr7_3:3382314-3382333 | None:intergenic | 20.0% |
| !!! | GTGTGAAGTTTTTTTTTTTT+TGG | + | chr7_3:3382328-3382347 | None:intergenic | 20.0% |
| !!! | TTTTTGATGTTTTCAAGGAA+TGG | + | chr7_3:3380321-3380340 | None:intergenic | 25.0% |
| ! | TGAATGTTCATGATTAAGAT+TGG | + | chr7_3:3380874-3380893 | None:intergenic | 25.0% |
| !!! | CAACTCATGATTTTAATTTG+TGG | - | chr7_3:3380892-3380911 | Msa1089740:intron | 25.0% |
| ! | CATTAATATTCACAATCTCA+GGG | - | chr7_3:3381178-3381197 | Msa1089740:CDS | 25.0% |
| !!! | TTAGTATGTCTTCTTGTTTT+GGG | + | chr7_3:3381260-3381279 | None:intergenic | 25.0% |
| ! | TCAATATCTGTACATCAAAA+AGG | + | chr7_3:3381421-3381440 | None:intergenic | 25.0% |
| ! | CTGTACCATAATAATAAGTA+GGG | + | chr7_3:3381852-3381871 | None:intergenic | 25.0% |
| !!! | AAGCAACAAAGTTGTTTTTG+TGG | - | chr7_3:3380170-3380189 | Msa1089740:CDS | 30.0% |
| ! | AGAGGTTTTTGATGTTTTCA+AGG | + | chr7_3:3380326-3380345 | None:intergenic | 30.0% |
| ! | CACACAAAAAACTTGTTTGA+TGG | + | chr7_3:3380483-3380502 | None:intergenic | 30.0% |
| AAATCAACTGCCTCAAAATT+TGG | - | chr7_3:3380563-3380582 | Msa1089740:CDS | 30.0% | |
| TCAAGAGAATAGTAATAGTG+CGG | - | chr7_3:3380596-3380615 | Msa1089740:intron | 30.0% | |
| ! | CAGAAACTTGAATCCATTTT+GGG | + | chr7_3:3380625-3380644 | None:intergenic | 30.0% |
| AGGTAATTAAATGTGTTGTG+TGG | - | chr7_3:3380766-3380785 | Msa1089740:CDS | 30.0% | |
| TATATTTGTGACTGCAATTG+AGG | - | chr7_3:3381007-3381026 | Msa1089740:intron | 30.0% | |
| !! | ATAGTGTATCAGTTAGTCTT+AGG | - | chr7_3:3381073-3381092 | Msa1089740:intron | 30.0% |
| CCTGAGATTGTGAATATTAA+TGG | + | chr7_3:3381180-3381199 | None:intergenic | 30.0% | |
| CCATTAATATTCACAATCTC+AGG | - | chr7_3:3381177-3381196 | Msa1089740:CDS | 30.0% | |
| !! | CTTAGTATGTCTTCTTGTTT+TGG | + | chr7_3:3381261-3381280 | None:intergenic | 30.0% |
| !! | ATCGATTTTACTTCTGTTAC+TGG | + | chr7_3:3381567-3381586 | None:intergenic | 30.0% |
| CAGAAGTAAAATCGATGTTA+AGG | - | chr7_3:3381571-3381590 | Msa1089740:intron | 30.0% | |
| GCAAAGTAAATCTCAGAAAA+AGG | - | chr7_3:3381598-3381617 | Msa1089740:CDS | 30.0% | |
| GAACACCCTACTTATTATTA+TGG | - | chr7_3:3381844-3381863 | Msa1089740:intron | 30.0% | |
| CCTGTACCATAATAATAAGT+AGG | + | chr7_3:3381853-3381872 | None:intergenic | 30.0% | |
| CCTACTTATTATTATGGTAC+AGG | - | chr7_3:3381850-3381869 | Msa1089740:intron | 30.0% | |
| AGAGAAGGATTATATTGTGT+AGG | - | chr7_3:3381967-3381986 | Msa1089740:intron | 30.0% | |
| ACAAGTAAAGGAAATCAAAG+AGG | + | chr7_3:3382164-3382183 | None:intergenic | 30.0% | |
| ! | TCTTTGATTTCCTTTACTTG+TGG | - | chr7_3:3382163-3382182 | Msa1089740:intron | 30.0% |
| TCAAAATTAACCTTGACTGA+TGG | - | chr7_3:3382221-3382240 | Msa1089740:intron | 30.0% | |
| TTGAATGTTCGATTGCAAAA+GGG | + | chr7_3:3382284-3382303 | None:intergenic | 30.0% | |
| TTTGAATGTTCGATTGCAAA+AGG | + | chr7_3:3382285-3382304 | None:intergenic | 30.0% | |
| !!! | TTTGGTTTTGAAATTGAGGA+GGG | + | chr7_3:3382310-3382329 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTTGAAATTGAGG+AGG | + | chr7_3:3382311-3382330 | None:intergenic | 30.0% |
| TGAGGATCCAAACTTAAATA+AGG | + | chr7_3:3382376-3382395 | None:intergenic | 30.0% | |
| !! | TGTTTTTGTGGAAACAACCA+AGG | - | chr7_3:3380182-3380201 | Msa1089740:CDS | 35.0% |
| ! | TTGATCATTGTTGCTGTTGA+TGG | + | chr7_3:3380274-3380293 | None:intergenic | 35.0% |
| !! | CTTGAATGTTGATGATGACA+CGG | - | chr7_3:3380455-3380474 | Msa1089740:CDS | 35.0% |
| !!! | TTTTGAGGCAGTTGATTTGT+TGG | + | chr7_3:3380561-3380580 | None:intergenic | 35.0% |
| CCTCAAAATTTGGATTCTGA+GGG | - | chr7_3:3380573-3380592 | Msa1089740:CDS | 35.0% | |
| ! | CCAGAAACTTGAATCCATTT+TGG | + | chr7_3:3380626-3380645 | None:intergenic | 35.0% |
| ! | CCAAAATGGATTCAAGTTTC+TGG | - | chr7_3:3380623-3380642 | Msa1089740:intron | 35.0% |
| !! | GATTTTAGAGGTTTCCACAA+CGG | + | chr7_3:3380986-3381005 | None:intergenic | 35.0% |
| AGAACTACTACATTTCCTGA+CGG | + | chr7_3:3381043-3381062 | None:intergenic | 35.0% | |
| TCAGGAAATGTAGTAGTTCT+AGG | - | chr7_3:3381043-3381062 | Msa1089740:intron | 35.0% | |
| TTGTGCCAAGTTTAAAGGTT+CGG | - | chr7_3:3381145-3381164 | Msa1089740:CDS | 35.0% | |
| ! | GCCTCTCACAAATACAATTT+TGG | - | chr7_3:3381472-3381491 | Msa1089740:CDS | 35.0% |
| GCCAAAATTGTATTTGTGAG+AGG | + | chr7_3:3381476-3381495 | None:intergenic | 35.0% | |
| AGCTTTACAATGGATCCTAA+TGG | + | chr7_3:3381682-3381701 | None:intergenic | 35.0% | |
| ! | TGGTAATTTGTACAACAGTG+TGG | - | chr7_3:3381732-3381751 | Msa1089740:CDS | 35.0% |
| AGGAACATCAAAGAGAAAGA+GGG | - | chr7_3:3381870-3381889 | Msa1089740:intron | 35.0% | |
| AGATGCGAAAAAACAGAAAG+TGG | + | chr7_3:3382012-3382031 | None:intergenic | 35.0% | |
| TCACTTCAAGATCATCAAGA+GGG | + | chr7_3:3382059-3382078 | None:intergenic | 35.0% | |
| TTCACTTCAAGATCATCAAG+AGG | + | chr7_3:3382060-3382079 | None:intergenic | 35.0% | |
| ATTTCCTTTACTTGTGGTGT+AGG | - | chr7_3:3382169-3382188 | Msa1089740:intron | 35.0% | |
| TGAATGTTCGATTGCAAAAG+GGG | + | chr7_3:3382283-3382302 | None:intergenic | 35.0% | |
| !!! | TTGGTTTTGAAATTGAGGAG+GGG | + | chr7_3:3382309-3382328 | None:intergenic | 35.0% |
| AAACTTAAATAAGGACGTGG+AGG | + | chr7_3:3382367-3382386 | None:intergenic | 35.0% | |
| ! | TCCACGTCCTTATTTAAGTT+TGG | - | chr7_3:3382366-3382385 | Msa1089740:intron | 35.0% |
| TCCAAACTTAAATAAGGACG+TGG | + | chr7_3:3382370-3382389 | None:intergenic | 35.0% | |
| ! | ACAACTCCTTCCTTCAATTT+TGG | - | chr7_3:3382465-3382484 | Msa1089740:CDS | 35.0% |
| ! | TCTTCTCCTTCCTTCAATTT+TGG | - | chr7_3:3382504-3382523 | Msa1089740:CDS | 35.0% |
| AAAAAAGTCGTAGGAGTAGT+AGG | + | chr7_3:3382633-3382652 | None:intergenic | 35.0% | |
| !!! | ACTACTCCTACGACTTTTTT+TGG | - | chr7_3:3382633-3382652 | Msa1089740:CDS | 35.0% |
| !!! | GACTTTTTTTGGAGCAACAT+TGG | - | chr7_3:3382644-3382663 | Msa1089740:CDS | 35.0% |
| !! | GAGAGTGTCAACAAAATCCT+TGG | + | chr7_3:3380202-3380221 | None:intergenic | 40.0% |
| ! | ATCATTGTTGCTGTTGATGG+TGG | + | chr7_3:3380271-3380290 | None:intergenic | 40.0% |
| ! | AGGAATGGTGATGATTCTGA+GGG | + | chr7_3:3380306-3380325 | None:intergenic | 40.0% |
| ! | AAGGAATGGTGATGATTCTG+AGG | + | chr7_3:3380307-3380326 | None:intergenic | 40.0% |
| !!! | AGTATAGGTTTTGGACGGTT+TGG | + | chr7_3:3380350-3380369 | None:intergenic | 40.0% |
| !!! | GTCTGAGTATAGGTTTTGGA+CGG | + | chr7_3:3380355-3380374 | None:intergenic | 40.0% |
| ! | CATCGTCTGAGTATAGGTTT+TGG | + | chr7_3:3380359-3380378 | None:intergenic | 40.0% |
| ACCTATACTCAGACGATGTT+TGG | - | chr7_3:3380361-3380380 | Msa1089740:CDS | 40.0% | |
| TCCAAACATCGTCTGAGTAT+AGG | + | chr7_3:3380365-3380384 | None:intergenic | 40.0% | |
| AGTGATTCACATGGATTCCT+GGG | + | chr7_3:3380420-3380439 | None:intergenic | 40.0% | |
| TTCATGCACAGTGATTCACA+TGG | + | chr7_3:3380429-3380448 | None:intergenic | 40.0% | |
| CAAAACATTCATCGCACTTG+TGG | - | chr7_3:3380531-3380550 | Msa1089740:CDS | 40.0% | |
| GCCTCAAAATTTGGATTCTG+AGG | - | chr7_3:3380572-3380591 | Msa1089740:CDS | 40.0% | |
| ! | CCCTCAGAATCCAAATTTTG+AGG | + | chr7_3:3380576-3380595 | None:intergenic | 40.0% |
| AAGTAAGTCACAGACGAACA+TGG | + | chr7_3:3380672-3380691 | None:intergenic | 40.0% | |
| ! | TTGCAGCTGTTGATGGAATT+GGG | - | chr7_3:3380690-3380709 | Msa1089740:CDS | 40.0% |
| TTCAGACTTGACTCAACTAG+AGG | - | chr7_3:3380716-3380735 | Msa1089740:CDS | 40.0% | |
| GAACTACTACATTTCCTGAC+GGG | + | chr7_3:3381042-3381061 | None:intergenic | 40.0% | |
| ! | GTAGCTTGTGCCAAGTTTAA+AGG | - | chr7_3:3381140-3381159 | Msa1089740:CDS | 40.0% |
| CCTTTCCGAACCTTTAAACT+TGG | + | chr7_3:3381153-3381172 | None:intergenic | 40.0% | |
| CCAAGTTTAAAGGTTCGGAA+AGG | - | chr7_3:3381150-3381169 | Msa1089740:CDS | 40.0% | |
| ATTTGTGAGAGGCTCATTAG+AGG | + | chr7_3:3381465-3381484 | None:intergenic | 40.0% | |
| !!! | AGGTGGGTTGTCTTTAGTTT+TGG | + | chr7_3:3381507-3381526 | None:intergenic | 40.0% |
| TTGATGCAGATTGCTTAGGT+GGG | + | chr7_3:3381523-3381542 | None:intergenic | 40.0% | |
| ACTGTTGATGCAGATTGCTT+AGG | + | chr7_3:3381527-3381546 | None:intergenic | 40.0% | |
| TTACTTCTGTTACTGGTGCA+AGG | + | chr7_3:3381560-3381579 | None:intergenic | 40.0% | |
| GTGATATATGCAGAAGCCAA+CGG | - | chr7_3:3381620-3381639 | Msa1089740:CDS | 40.0% | |
| GAAGTCAACAAAATCACCGT+TGG | + | chr7_3:3381639-3381658 | None:intergenic | 40.0% | |
| TAGCTTCCTTACATGCCATT+AGG | - | chr7_3:3381664-3381683 | Msa1089740:CDS | 40.0% | |
| ATGGATCCTAATGGCATGTA+AGG | + | chr7_3:3381673-3381692 | None:intergenic | 40.0% | |
| AGGATCCATTGTAAAGCTTG+TGG | - | chr7_3:3381684-3381703 | Msa1089740:CDS | 40.0% | |
| GGATCCATTGTAAAGCTTGT+GGG | - | chr7_3:3381685-3381704 | Msa1089740:CDS | 40.0% | |
| ACACATCCAGCAAAAGAGTT+AGG | + | chr7_3:3381712-3381731 | None:intergenic | 40.0% | |
| ! | AACTCTTTTGCTGGATGTGT+TGG | - | chr7_3:3381712-3381731 | Msa1089740:CDS | 40.0% |
| GATTGAGTAACACAGAAACC+GGG | + | chr7_3:3381768-3381787 | None:intergenic | 40.0% | |
| GGATTGAGTAACACAGAAAC+CGG | + | chr7_3:3381769-3381788 | None:intergenic | 40.0% | |
| ! | GTTTCTGTGTTACTCAATCC+TGG | - | chr7_3:3381769-3381788 | Msa1089740:intron | 40.0% |
| CAGGAACATCAAAGAGAAAG+AGG | - | chr7_3:3381869-3381888 | Msa1089740:intron | 40.0% | |
| ! | ACACCTTCTTTTGACCTGTT+GGG | + | chr7_3:3381931-3381950 | None:intergenic | 40.0% |
| ! | AACACCTTCTTTTGACCTGT+TGG | + | chr7_3:3381932-3381951 | None:intergenic | 40.0% |
| !! | AGGTCAAAAGAAGGTGTTGT+GGG | - | chr7_3:3381934-3381953 | Msa1089740:intron | 40.0% |
| GAAGTGAAGCTGATAAGCAT+TGG | - | chr7_3:3382072-3382091 | Msa1089740:intron | 40.0% | |
| !! | GATAAGCATTGGTGAAGTTG+AGG | - | chr7_3:3382083-3382102 | Msa1089740:intron | 40.0% |
| AAAGCCTACACCACAAGTAA+AGG | + | chr7_3:3382176-3382195 | None:intergenic | 40.0% | |
| TTGATGTCAAGAATGCTCCA+AGG | + | chr7_3:3382205-3382224 | None:intergenic | 40.0% | |
| ! | ATTAACCTTGACTGATGGAC+TGG | - | chr7_3:3382226-3382245 | Msa1089740:intron | 40.0% |
| !! | TTAACCTTGACTGATGGACT+GGG | - | chr7_3:3382227-3382246 | Msa1089740:intron | 40.0% |
| ! | GGATTTTAGGCACTTTCGAA+AGG | + | chr7_3:3382256-3382275 | None:intergenic | 40.0% |
| !! | CAAAAGGGGTTTGGGATTTT+AGG | + | chr7_3:3382269-3382288 | None:intergenic | 40.0% |
| TTCGATTGCAAAAGGGGTTT+GGG | + | chr7_3:3382277-3382296 | None:intergenic | 40.0% | |
| AGAAGGACAAGAAGTAGTTG+CGG | + | chr7_3:3382409-3382428 | None:intergenic | 40.0% | |
| ATTGAAGGAAGGAGTTGTTC+TGG | + | chr7_3:3382463-3382482 | None:intergenic | 40.0% | |
| GAGGATCCAAAATTGAAGGA+AGG | + | chr7_3:3382474-3382493 | None:intergenic | 40.0% | |
| GACGATCCAAAATTGAAGGA+AGG | + | chr7_3:3382513-3382532 | None:intergenic | 40.0% | |
| GTTGCTCCAAAAAAAGTCGT+AGG | + | chr7_3:3382642-3382661 | None:intergenic | 40.0% | |
| !! | AGCAACATTGGCTTCAAATG+CGG | - | chr7_3:3382656-3382675 | Msa1089740:CDS | 40.0% |
| TCTATGCCATCCTTTGGATT+TGG | - | chr7_3:3383003-3383022 | Msa1089740:CDS | 40.0% | |
| CCAAAACCAAATCCAAAGGA+TGG | + | chr7_3:3383012-3383031 | None:intergenic | 40.0% | |
| !! | CCATCCTTTGGATTTGGTTT+TGG | - | chr7_3:3383009-3383028 | Msa1089740:CDS | 40.0% |
| AGCTTCCTATCTCTTCCACT+TGG | - | chr7_3:3380225-3380244 | Msa1089740:CDS | 45.0% | |
| !! | TGTTGATGGTGGCTAAAAGG+CGG | + | chr7_3:3380260-3380279 | None:intergenic | 45.0% |
| !! | TGCTGTTGATGGTGGCTAAA+AGG | + | chr7_3:3380263-3380282 | None:intergenic | 45.0% |
| ! | ATGGTGATGATTCTGAGGGT+TGG | + | chr7_3:3380302-3380321 | None:intergenic | 45.0% |
| AACAAATGTTGCTGCATCCC+AGG | - | chr7_3:3380400-3380419 | Msa1089740:CDS | 45.0% | |
| CAGTGATTCACATGGATTCC+TGG | + | chr7_3:3380421-3380440 | None:intergenic | 45.0% | |
| AATAGTGCGGATGCCCAAAA+TGG | - | chr7_3:3380609-3380628 | Msa1089740:intron | 45.0% | |
| GACTTACTTGCAGCTGTTGA+TGG | - | chr7_3:3380683-3380702 | Msa1089740:CDS | 45.0% | |
| ! | CTTGCAGCTGTTGATGGAAT+TGG | - | chr7_3:3380689-3380708 | Msa1089740:CDS | 45.0% |
| ! | TGCAGCTGTTGATGGAATTG+GGG | - | chr7_3:3380691-3380710 | Msa1089740:CDS | 45.0% |
| GAGGAAGTCACACACAACAT+TGG | - | chr7_3:3380735-3380754 | Msa1089740:CDS | 45.0% | |
| GATAAATGCGCCCACAACTT+CGG | - | chr7_3:3380952-3380971 | Msa1089740:CDS | 45.0% | |
| GGCATCATAACCGAAGTTGT+GGG | + | chr7_3:3380965-3380984 | None:intergenic | 45.0% | |
| GAGAGGCTCATTAGAGGTTA+AGG | + | chr7_3:3381459-3381478 | None:intergenic | 45.0% | |
| GTTGATGCAGATTGCTTAGG+TGG | + | chr7_3:3381524-3381543 | None:intergenic | 45.0% | |
| AGGTCCCACAAGCTTTACAA+TGG | + | chr7_3:3381692-3381711 | None:intergenic | 45.0% | |
| ! | TGGTTTGGACAACCAAACTG+TGG | + | chr7_3:3381802-3381821 | None:intergenic | 45.0% |
| TCAACCTGAGGAATGTTGAG+TGG | + | chr7_3:3381826-3381845 | None:intergenic | 45.0% | |
| ! | TAAGTAGGGTGTTCAACCTG+AGG | + | chr7_3:3381838-3381857 | None:intergenic | 45.0% |
| TCAGTGCAATCAAGGACCTT+GGG | + | chr7_3:3381897-3381916 | None:intergenic | 45.0% | |
| TTCAGTGCAATCAAGGACCT+TGG | + | chr7_3:3381898-3381917 | None:intergenic | 45.0% | |
| ! | ACCTTCTTTTGACCTGTTGG+GGG | + | chr7_3:3381929-3381948 | None:intergenic | 45.0% |
| ! | CACCTTCTTTTGACCTGTTG+GGG | + | chr7_3:3381930-3381949 | None:intergenic | 45.0% |
| !! | CAGGTCAAAAGAAGGTGTTG+TGG | - | chr7_3:3381933-3381952 | Msa1089740:intron | 45.0% |
| GTGGGATTTGTGAAGAGAGA+AGG | - | chr7_3:3381952-3381971 | Msa1089740:intron | 45.0% | |
| CTTCAAGATCATCAAGAGGG+AGG | + | chr7_3:3382056-3382075 | None:intergenic | 45.0% | |
| !! | GTGTAGGCTTTGAACTTCCT+TGG | - | chr7_3:3382185-3382204 | Msa1089740:intron | 45.0% |
| GTTCGATTGCAAAAGGGGTT+TGG | + | chr7_3:3382278-3382297 | None:intergenic | 45.0% | |
| CTTAAATAAGGACGTGGAGG+TGG | + | chr7_3:3382364-3382383 | None:intergenic | 45.0% | |
| ! | TTCTGGAAGAGGAAGGAGAT+GGG | + | chr7_3:3382446-3382465 | None:intergenic | 45.0% |
| GGGAGAGGATCCAAAATTGA+AGG | + | chr7_3:3382478-3382497 | None:intergenic | 45.0% | |
| AAGGAAGGAGAAGAACTAGC+GGG | + | chr7_3:3382498-3382517 | None:intergenic | 45.0% | |
| GAAGGAAGGAGAAGAACTAG+CGG | + | chr7_3:3382499-3382518 | None:intergenic | 45.0% | |
| ! | TTCAATTTTGGATCGTCCGC+CGG | - | chr7_3:3382516-3382535 | Msa1089740:intron | 45.0% |
| GAAGGAAGGAGAAGAACTAC+CGG | + | chr7_3:3382538-3382557 | None:intergenic | 45.0% | |
| AATGGAAGAAGCTGAAGCAG+AGG | + | chr7_3:3382568-3382587 | None:intergenic | 45.0% | |
| CCAAAGGACGGTACTCTAAA+CGG | + | chr7_3:3382723-3382742 | None:intergenic | 45.0% | |
| AAAGACAGCATAGAAGCCTC+TGG | + | chr7_3:3382817-3382836 | None:intergenic | 45.0% | |
| ! | GAGGCTTCTATGCTGTCTTT+TGG | - | chr7_3:3382817-3382836 | Msa1089740:CDS | 45.0% |
| TCAAACGAGGTTGAAGAAGC+CGG | + | chr7_3:3382970-3382989 | None:intergenic | 45.0% | |
| ! | TGGTGCCAAGTGGAAGAGAT+AGG | + | chr7_3:3380233-3380252 | None:intergenic | 50.0% |
| !!! | GGTTTTGGACGGTTTGGTAG+AGG | + | chr7_3:3380344-3380363 | None:intergenic | 50.0% |
| CACACACAACATTGGCAAGC+AGG | - | chr7_3:3380743-3380762 | Msa1089740:CDS | 50.0% | |
| ACACAACATTGGCAAGCAGG+AGG | - | chr7_3:3380746-3380765 | Msa1089740:CDS | 50.0% | |
| CGGCATCATAACCGAAGTTG+TGG | + | chr7_3:3380966-3380985 | None:intergenic | 50.0% | |
| CTTCGGTTATGATGCCGTTG+TGG | - | chr7_3:3380969-3380988 | Msa1089740:CDS | 50.0% | |
| ! | GTGGGACCTAACTCTTTTGC+TGG | - | chr7_3:3381703-3381722 | Msa1089740:CDS | 50.0% |
| CAGTGTGGAGAACTTGAACC+CGG | - | chr7_3:3381747-3381766 | Msa1089740:intron | 50.0% | |
| !! | CCAAACTGTGGTGCTATACC+AGG | + | chr7_3:3381790-3381809 | None:intergenic | 50.0% |
| CCTGGTATAGCACCACAGTT+TGG | - | chr7_3:3381787-3381806 | Msa1089740:intron | 50.0% | |
| ! | GGAATGTTGAGTGGCTGGTT+TGG | + | chr7_3:3381817-3381836 | None:intergenic | 50.0% |
| CAAAGAGAAAGAGGGACCCA+AGG | - | chr7_3:3381878-3381897 | Msa1089740:intron | 50.0% | |
| CCTTGGGTTCAGTGCAATCA+AGG | + | chr7_3:3381905-3381924 | None:intergenic | 50.0% | |
| CCTTGATTGCACTGAACCCA+AGG | - | chr7_3:3381902-3381921 | Msa1089740:intron | 50.0% | |
| TCCCCCAACAGGTCAAAAGA+AGG | - | chr7_3:3381925-3381944 | Msa1089740:intron | 50.0% | |
| AGGACAAGAAGTAGTTGCGG+TGG | + | chr7_3:3382406-3382425 | None:intergenic | 50.0% | |
| AGGAGATGGGAAGAAAGAGG+AGG | + | chr7_3:3382433-3382452 | None:intergenic | 50.0% | |
| GGAAGGAGATGGGAAGAAAG+AGG | + | chr7_3:3382436-3382455 | None:intergenic | 50.0% | |
| !! | GTTCTGGAAGAGGAAGGAGA+TGG | + | chr7_3:3382447-3382466 | None:intergenic | 50.0% |
| !! | GGAGTTGTTCTGGAAGAGGA+AGG | + | chr7_3:3382453-3382472 | None:intergenic | 50.0% |
| !! | GGAAGGAGTTGTTCTGGAAG+AGG | + | chr7_3:3382457-3382476 | None:intergenic | 50.0% |
| GGCGGACGATCCAAAATTGA+AGG | + | chr7_3:3382517-3382536 | None:intergenic | 50.0% | |
| TTCTTCTCCTTCCTTCCCAC+CGG | - | chr7_3:3382542-3382561 | Msa1089740:intron | 50.0% | |
| !! | AACGGTGGCGGAACTGAAAA+TGG | + | chr7_3:3382586-3382605 | None:intergenic | 50.0% |
| ! | ATTTTCAGTTCCGCCACCGT+TGG | - | chr7_3:3382585-3382604 | Msa1089740:CDS | 50.0% |
| TTGGCTTCAAATGCGGCTTC+AGG | - | chr7_3:3382663-3382682 | Msa1089740:CDS | 50.0% | |
| TGGCTTCAAATGCGGCTTCA+GGG | - | chr7_3:3382664-3382683 | Msa1089740:CDS | 50.0% | |
| ! | GTCGTCATTTGGAGCATCAC+CGG | - | chr7_3:3382686-3382705 | Msa1089740:CDS | 50.0% |
| ! | CTAAACGGCGTTGAAGAAGC+CGG | + | chr7_3:3382708-3382727 | None:intergenic | 50.0% |
| !! | CCGTTTAGAGTACCGTCCTT+TGG | - | chr7_3:3382720-3382739 | Msa1089740:CDS | 50.0% |
| ! | CCGATGATGGTGCTCCAAAA+CGG | + | chr7_3:3382768-3382787 | None:intergenic | 50.0% |
| !!! | CCGTTTTGGAGCACCATCAT+CGG | - | chr7_3:3382765-3382784 | Msa1089740:intron | 50.0% |
| AAAGACGGAATAGAAGCCGC+TGG | + | chr7_3:3382847-3382866 | None:intergenic | 50.0% | |
| ! | GCGGCTTCTATTCCGTCTTT+TGG | - | chr7_3:3382847-3382866 | Msa1089740:CDS | 50.0% |
| GCTGTCAGAGCTCCAAAAGA+CGG | + | chr7_3:3382862-3382881 | None:intergenic | 50.0% | |
| ACAGCTTCTACACCGTCGTT+TGG | - | chr7_3:3382877-3382896 | Msa1089740:CDS | 50.0% | |
| ! | ACCGTCGTTTGGAACATCAG+AGG | - | chr7_3:3382888-3382907 | Msa1089740:CDS | 50.0% |
| GCCTCTGATGTTCCAAACGA+CGG | + | chr7_3:3382892-3382911 | None:intergenic | 50.0% | |
| GAGGCTTCTACACCGTCATT+TGG | - | chr7_3:3382907-3382926 | Msa1089740:CDS | 50.0% | |
| GCCGTTGTTTGGAGATTCAC+CGG | - | chr7_3:3382948-3382967 | Msa1089740:CDS | 50.0% | |
| GCCGGTGAATCTCCAAACAA+CGG | + | chr7_3:3382952-3382971 | None:intergenic | 50.0% | |
| ! | AACCTCGTTTGAAGCACCAG+CGG | - | chr7_3:3382978-3382997 | Msa1089740:CDS | 50.0% |
| AAGGATGGCATAGAATCCGC+TGG | + | chr7_3:3382997-3383016 | None:intergenic | 50.0% | |
| GCGGATTCTATGCCATCCTT+TGG | - | chr7_3:3382997-3383016 | Msa1089740:CDS | 50.0% | |
| GGTGGCTAAAAGGCGGACAA+TGG | + | chr7_3:3380253-3380272 | None:intergenic | 55.0% | |
| TGAGGCATGTTTCACCCGTC+AGG | - | chr7_3:3381025-3381044 | Msa1089740:intron | 55.0% | |
| CCTGAGGAATGTTGAGTGGC+TGG | + | chr7_3:3381822-3381841 | None:intergenic | 55.0% | |
| CCAGCCACTCAACATTCCTC+AGG | - | chr7_3:3381819-3381838 | Msa1089740:intron | 55.0% | |
| TTGACCTGTTGGGGGACCTT+GGG | + | chr7_3:3381921-3381940 | None:intergenic | 55.0% | |
| TTTGACCTGTTGGGGGACCT+TGG | + | chr7_3:3381922-3381941 | None:intergenic | 55.0% | |
| GTCTCCCAGTCCATCAGTCA+AGG | + | chr7_3:3382234-3382253 | None:intergenic | 55.0% | |
| TGGAGGTGGATGATGAGGGA+GGG | + | chr7_3:3382350-3382369 | None:intergenic | 55.0% | |
| GACGTGGAGGTGGATGATGA+GGG | + | chr7_3:3382354-3382373 | None:intergenic | 55.0% | |
| AGTTGCGGTGGTTGTCTGTG+AGG | + | chr7_3:3382394-3382413 | None:intergenic | 55.0% | |
| GGGAAGAAAGAGGAGGCAGA+AGG | + | chr7_3:3382426-3382445 | None:intergenic | 55.0% | |
| AGGAGAAGAACTAGCGGGAG+AGG | + | chr7_3:3382493-3382512 | None:intergenic | 55.0% | |
| GGAAGGAGAAGAACTACCGG+CGG | + | chr7_3:3382535-3382554 | None:intergenic | 55.0% | |
| GAAGAAGCTGAAGCAGAGGC+CGG | + | chr7_3:3382564-3382583 | None:intergenic | 55.0% | |
| ACCACCAAACAGCGAGCCAA+CGG | + | chr7_3:3382604-3382623 | None:intergenic | 55.0% | |
| ! | GATGACGGTGCTCCAAAGGA+CGG | + | chr7_3:3382735-3382754 | None:intergenic | 55.0% |
| !! | GTCCTTTGGAGCACCGTCAT+CGG | - | chr7_3:3382734-3382753 | Msa1089740:CDS | 55.0% |
| ! | AACGGTGTCGAAGCCGATGA+CGG | + | chr7_3:3382750-3382769 | None:intergenic | 55.0% |
| !!! | CATCGGCTTCGACACCGTTT+TGG | - | chr7_3:3382751-3382770 | Msa1089740:CDS | 55.0% |
| !! | CACCATCATCGGCTTCGTGT+AGG | - | chr7_3:3382776-3382795 | Msa1089740:intron | 55.0% |
| ! | GCTTCGTGTAGGCCGTCTTT+TGG | - | chr7_3:3382787-3382806 | Msa1089740:intron | 55.0% |
| GCCTCTGGTGGTCCAAAAGA+CGG | + | chr7_3:3382802-3382821 | None:intergenic | 55.0% | |
| GACAGCATAGAAGCCTCTGG+TGG | + | chr7_3:3382814-3382833 | None:intergenic | 55.0% | |
| !!! | GCTGTCTTTTGGAGCACCAG+CGG | - | chr7_3:3382828-3382847 | Msa1089740:CDS | 55.0% |
| GCTGCTGGTGCTCCAAATGA+CGG | + | chr7_3:3382922-3382941 | None:intergenic | 55.0% | |
| AACAACGGCGTAGAAGCTGC+TGG | + | chr7_3:3382937-3382956 | None:intergenic | 55.0% | |
| GCAGCTTCTACGCCGTTGTT+TGG | - | chr7_3:3382937-3382956 | Msa1089740:CDS | 55.0% | |
| ATCCGCTGGTGCTTCAAACG+AGG | + | chr7_3:3382983-3383002 | None:intergenic | 55.0% | |
| ! | AGGCGGACAATGGTGCCAAG+TGG | + | chr7_3:3380243-3380262 | None:intergenic | 60.0% |
| TGAACCCAAGGTCCCCCAAC+AGG | - | chr7_3:3381914-3381933 | Msa1089740:intron | 60.0% | |
| GTGGAGGTGGATGATGAGGG+AGG | + | chr7_3:3382351-3382370 | None:intergenic | 60.0% | |
| GGACGTGGAGGTGGATGATG+AGG | + | chr7_3:3382355-3382374 | None:intergenic | 60.0% | |
| AAGCTGAAGCAGAGGCCGGT+GGG | + | chr7_3:3382560-3382579 | None:intergenic | 60.0% | |
| AAACAGCGAGCCAACGGTGG+CGG | + | chr7_3:3382598-3382617 | None:intergenic | 60.0% | |
| ACCAAACAGCGAGCCAACGG+TGG | + | chr7_3:3382601-3382620 | None:intergenic | 60.0% | |
| !! | ACCGTTGGCTCGCTGTTTGG+TGG | - | chr7_3:3382600-3382619 | Msa1089740:CDS | 60.0% |
| GCGGCTTCAGGGTCGTCATT+TGG | - | chr7_3:3382675-3382694 | Msa1089740:CDS | 60.0% | |
| ! | AGCCGATGACGGTGCTCCAA+AGG | + | chr7_3:3382739-3382758 | None:intergenic | 60.0% |
| GGCCTACACGAAGCCGATGA+TGG | + | chr7_3:3382781-3382800 | None:intergenic | 60.0% | |
| ! | GCCGTCTTTTGGACCACCAG+AGG | - | chr7_3:3382798-3382817 | Msa1089740:CDS | 60.0% |
| TGAAGCAGAGGCCGGTGGGA+AGG | + | chr7_3:3382556-3382575 | None:intergenic | 65.0% | |
| GAAGCTGAAGCAGAGGCCGG+TGG | + | chr7_3:3382561-3382580 | None:intergenic | 65.0% | |
| !! | GCCACCGTTGGCTCGCTGTT+TGG | - | chr7_3:3382597-3382616 | Msa1089740:CDS | 65.0% |
| GCAGAGGCCGGTGGGAAGGA+AGG | + | chr7_3:3382552-3382571 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 3380165 | 3383032 | 3380165 | ID=Msa1089740;Name=Msa1089740 |
| chr7_3 | mRNA | 3380165 | 3383032 | 3380165 | ID=Msa1089740-mRNA-1;Parent=Msa1089740;Name=Msa1089740-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.25|0|1|0.12|0|9|0|613 |
| chr7_3 | exon | 3382791 | 3383032 | 3382791 | ID=Msa1089740-mRNA-1:exon:1284;Parent=Msa1089740-mRNA-1 |
| chr7_3 | exon | 3382553 | 3382775 | 3382553 | ID=Msa1089740-mRNA-1:exon:1283;Parent=Msa1089740-mRNA-1 |
| chr7_3 | exon | 3382430 | 3382534 | 3382430 | ID=Msa1089740-mRNA-1:exon:1282;Parent=Msa1089740-mRNA-1 |
| chr7_3 | exon | 3381578 | 3381763 | 3381578 | ID=Msa1089740-mRNA-1:exon:1281;Parent=Msa1089740-mRNA-1 |
| chr7_3 | exon | 3381332 | 3381530 | 3381332 | ID=Msa1089740-mRNA-1:exon:1280;Parent=Msa1089740-mRNA-1 |
| chr7_3 | exon | 3381093 | 3381325 | 3381093 | ID=Msa1089740-mRNA-1:exon:1279;Parent=Msa1089740-mRNA-1 |
| chr7_3 | exon | 3380935 | 3381006 | 3380935 | ID=Msa1089740-mRNA-1:exon:1278;Parent=Msa1089740-mRNA-1 |
| chr7_3 | exon | 3380660 | 3380798 | 3380660 | ID=Msa1089740-mRNA-1:exon:1277;Parent=Msa1089740-mRNA-1 |
| chr7_3 | exon | 3380165 | 3380604 | 3380165 | ID=Msa1089740-mRNA-1:exon:1276;Parent=Msa1089740-mRNA-1 |
| chr7_3 | CDS | 3382791 | 3383032 | 3382791 | ID=Msa1089740-mRNA-1:cds;Parent=Msa1089740-mRNA-1 |
| chr7_3 | CDS | 3382553 | 3382775 | 3382553 | ID=Msa1089740-mRNA-1:cds;Parent=Msa1089740-mRNA-1 |
| chr7_3 | CDS | 3382430 | 3382534 | 3382430 | ID=Msa1089740-mRNA-1:cds;Parent=Msa1089740-mRNA-1 |
| chr7_3 | CDS | 3381578 | 3381763 | 3381578 | ID=Msa1089740-mRNA-1:cds;Parent=Msa1089740-mRNA-1 |
| chr7_3 | CDS | 3381332 | 3381530 | 3381332 | ID=Msa1089740-mRNA-1:cds;Parent=Msa1089740-mRNA-1 |
| chr7_3 | CDS | 3381093 | 3381325 | 3381093 | ID=Msa1089740-mRNA-1:cds;Parent=Msa1089740-mRNA-1 |
| chr7_3 | CDS | 3380935 | 3381006 | 3380935 | ID=Msa1089740-mRNA-1:cds;Parent=Msa1089740-mRNA-1 |
| chr7_3 | CDS | 3380660 | 3380798 | 3380660 | ID=Msa1089740-mRNA-1:cds;Parent=Msa1089740-mRNA-1 |
| chr7_3 | CDS | 3380165 | 3380604 | 3380165 | ID=Msa1089740-mRNA-1:cds;Parent=Msa1089740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
