AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0629540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0629540 MtrunA17_Chr4g0005901 93.704 270 9 1 68 329 308 577 0.0 514
Msa0629540 MtrunA17_Chr4g0005901 88.235 68 8 0 1 68 155 222 2.75e-33 129
Msa0629540 MtrunA17_Chr7g0241741 81.955 266 40 1 68 325 298 563 1.35e-159 457
Msa0629540 MtrunA17_Chr7g0241741 86.765 68 9 0 1 68 145 212 3.19e-32 126
Msa0629540 MtrunA17_Chr3g0104011 68.421 266 75 2 68 324 299 564 7.69e-129 379
Msa0629540 MtrunA17_Chr3g0104011 77.941 68 15 0 1 68 146 213 3.61e-24 102
Msa0629540 MtrunA17_Chr8g0375311 56.134 269 107 4 68 326 318 585 1.87e-100 307
Msa0629540 MtrunA17_Chr8g0375311 72.727 66 18 0 1 66 165 230 7.56e-25 105
Msa0629540 MtrunA17_Chr8g0375291 56.154 260 103 4 68 317 318 576 6.15e-98 300
Msa0629540 MtrunA17_Chr8g0375291 69.697 66 20 0 1 66 165 230 1.28e-23 101
Msa0629540 MtrunA17_Chr8g0375361 53.307 257 110 3 81 328 331 586 1.02e-91 285
Msa0629540 MtrunA17_Chr8g0375361 57.576 66 28 0 1 66 164 229 7.79e-19 87.4
Msa0629540 MtrunA17_Chr8g0375341 50.562 267 122 3 69 326 320 585 6.88e-89 277
Msa0629540 MtrunA17_Chr8g0375341 56.061 66 29 0 1 66 165 230 9.25e-20 90.1
Msa0629540 MtrunA17_Chr8g0375351 50.929 269 121 4 68 326 318 585 3.21e-87 273
Msa0629540 MtrunA17_Chr8g0375351 56.061 66 29 0 1 66 165 230 2.14e-19 89.0
Msa0629540 MtrunA17_Chr8g0375321 49.071 269 126 4 68 326 315 582 5.80e-83 262
Msa0629540 MtrunA17_Chr8g0375321 54.545 66 30 0 1 66 162 227 2.97e-18 85.5
Msa0629540 MtrunA17_Chr8g0375331 49.071 269 126 4 68 326 302 569 4.25e-80 254
Msa0629540 MtrunA17_Chr8g0375331 56.061 66 29 0 1 66 149 214 5.25e-19 87.8
Msa0629540 MtrunA17_Chr3g0082631 45.660 265 131 3 72 324 197 460 3.17e-76 241
Msa0629540 MtrunA17_Chr3g0082631 45.714 70 38 0 1 70 35 104 5.68e-13 69.3
Msa0629540 MtrunA17_Chr5g0422881 46.468 269 132 4 68 325 299 566 6.39e-74 238
Msa0629540 MtrunA17_Chr5g0422881 47.826 69 36 0 1 69 146 214 1.70e-15 77.4
Msa0629540 MtrunA17_Chr1g0213711 42.529 261 137 3 68 320 299 554 3.60e-73 236
Msa0629540 MtrunA17_Chr1g0213711 43.077 65 37 0 1 65 147 211 1.14e-11 65.5
Msa0629540 MtrunA17_Chr3g0142121 44.961 258 123 4 68 317 16 262 1.26e-72 226
Msa0629540 MtrunA17_Chr8g0353031 42.910 268 142 4 68 325 286 552 1.30e-72 234
Msa0629540 MtrunA17_Chr8g0353031 44.615 65 36 0 1 65 126 190 4.89e-13 69.7
Msa0629540 MtrunA17_Chr7g0217461 50.000 256 115 4 81 324 318 572 2.64e-72 234
Msa0629540 MtrunA17_Chr7g0217461 32.692 104 65 2 1 102 151 251 2.74e-11 64.3
Msa0629540 MtrunA17_Chr7g0218851 43.952 248 126 3 81 320 339 581 5.22e-72 234
Msa0629540 MtrunA17_Chr3g0077151 43.874 253 132 2 84 326 294 546 2.57e-70 228
Msa0629540 MtrunA17_Chr3g0077151 49.231 65 33 0 1 65 140 204 4.73e-14 72.8
Msa0629540 MtrunA17_Chr3g0142101 44.961 258 123 4 68 317 314 560 2.83e-70 229
Msa0629540 MtrunA17_Chr3g0142101 61.765 68 26 0 1 68 160 227 4.87e-21 94.0
Msa0629540 MtrunA17_Chr4g0054891 46.559 247 117 3 81 318 406 646 4.14e-70 230
Msa0629540 MtrunA17_Chr5g0400371 44.980 249 127 3 81 320 408 655 1.02e-69 229
Msa0629540 MtrunA17_Chr4g0063591 46.324 272 125 8 68 324 295 560 4.44e-69 225
Msa0629540 MtrunA17_Chr7g0214461 42.802 257 132 5 81 329 369 618 4.78e-69 226
Msa0629540 MtrunA17_Chr4g0011471 46.400 250 121 4 80 320 311 556 1.26e-68 224
Msa0629540 MtrunA17_Chr5g0439381 44.622 251 120 5 81 323 317 556 7.15e-68 223
Msa0629540 MtrunA17_Chr7g0261811 42.126 254 138 2 78 322 313 566 7.18e-68 223
Msa0629540 MtrunA17_Chr7g0261811 50.685 73 34 1 1 71 156 228 5.14e-15 75.9
Msa0629540 MtrunA17_Chr7g0255621 42.963 270 141 4 70 328 303 570 1.42e-67 222
Msa0629540 MtrunA17_Chr7g0261881 44.223 251 131 3 81 322 316 566 2.08e-67 221
Msa0629540 MtrunA17_Chr7g0261881 49.315 73 35 1 1 71 156 228 8.78e-14 72.0
Msa0629540 MtrunA17_Chr7g0255601 43.774 265 136 4 70 323 310 572 8.00e-67 220
Msa0629540 MtrunA17_Chr7g0255601 43.077 65 37 0 5 69 157 221 7.81e-12 66.2
Msa0629540 MtrunA17_Chr5g0399071 43.130 262 136 4 72 323 312 570 2.76e-66 218
Msa0629540 MtrunA17_Chr5g0399071 51.471 68 33 0 1 68 152 219 4.47e-11 63.9
Msa0629540 MtrunA17_Chr4g0014861 41.532 248 135 2 86 323 181 428 5.86e-66 213
Msa0629540 MtrunA17_Chr4g0014861 49.231 65 33 0 1 65 21 85 1.76e-13 70.9
Msa0629540 MtrunA17_Chr3g0142091 43.233 266 130 7 68 324 307 560 1.35e-64 214
Msa0629540 MtrunA17_Chr3g0142091 63.235 68 25 0 1 68 153 220 1.23e-20 92.4
Msa0629540 MtrunA17_Chr5g0399061 43.825 251 129 3 83 323 324 572 1.41e-64 214
Msa0629540 MtrunA17_Chr5g0399061 45.070 71 37 1 1 69 153 223 2.30e-13 70.9
Msa0629540 MtrunA17_Chr7g0261661 42.231 251 136 2 81 322 202 452 1.43e-64 212
Msa0629540 MtrunA17_Chr7g0261661 50.685 73 34 1 1 71 42 114 8.94e-16 77.8
Msa0629540 MtrunA17_Chr8g0362801 40.672 268 150 2 69 328 200 466 2.73e-64 210
Msa0629540 MtrunA17_Chr7g0261771 41.833 251 137 2 81 322 320 570 3.33e-64 213
Msa0629540 MtrunA17_Chr7g0261771 46.575 73 37 1 1 71 160 232 3.89e-14 73.2
Msa0629540 MtrunA17_Chr4g0014841 40.891 247 136 2 86 322 302 548 5.06e-64 212
Msa0629540 MtrunA17_Chr4g0014841 47.692 65 34 0 1 65 145 209 1.99e-12 67.8
Msa0629540 MtrunA17_Chr3g0112631 40.698 258 142 3 81 328 21 277 8.80e-64 204
Msa0629540 MtrunA17_Chr3g0114501 45.344 247 126 2 87 324 316 562 1.37e-63 211
Msa0629540 MtrunA17_Chr3g0114501 54.545 66 30 0 1 66 146 211 1.82e-16 80.1
Msa0629540 MtrunA17_Chr4g0014781 41.700 247 134 2 86 322 304 550 1.79e-63 210
Msa0629540 MtrunA17_Chr4g0014781 46.154 65 35 0 1 65 145 209 2.64e-12 67.4
Msa0629540 MtrunA17_Chr4g0014791 39.526 253 143 2 80 322 296 548 2.24e-63 210
Msa0629540 MtrunA17_Chr4g0014791 49.231 65 33 0 1 65 145 209 6.50e-13 69.3
Msa0629540 MtrunA17_Chr4g0008651 39.326 267 150 4 69 327 311 573 1.23e-62 209
Msa0629540 MtrunA17_Chr4g0008651 44.118 68 38 0 1 68 158 225 2.04e-12 67.8
Msa0629540 MtrunA17_Chr3g0112671 41.132 265 139 4 72 328 310 565 2.34e-62 208
Msa0629540 MtrunA17_Chr3g0112671 52.941 68 32 0 1 68 156 223 1.93e-16 80.1
Msa0629540 MtrunA17_Chr4g0014871 40.323 248 138 2 86 323 306 553 2.72e-62 207
Msa0629540 MtrunA17_Chr4g0014871 50.769 65 32 0 1 65 146 210 1.68e-13 71.2
Msa0629540 MtrunA17_Chr4g0056431 40.557 323 160 7 13 323 271 573 5.84e-62 207
Msa0629540 MtrunA17_Chr5g0415791 41.980 293 159 3 41 323 286 577 9.22e-62 207
Msa0629540 MtrunA17_Chr7g0261791 40.551 254 142 2 83 327 321 574 9.47e-62 207
Msa0629540 MtrunA17_Chr7g0261791 50.685 73 34 1 1 71 159 231 1.28e-15 77.8
Msa0629540 MtrunA17_Chr7g0261851 42.857 252 135 3 83 325 319 570 4.20e-61 205
Msa0629540 MtrunA17_Chr7g0261851 54.545 66 30 0 1 66 157 222 5.14e-14 72.8
Msa0629540 MtrunA17_Chr4g0014801 40.891 247 136 2 86 322 304 550 1.36e-60 202
Msa0629540 MtrunA17_Chr4g0014801 46.154 65 35 0 1 65 145 209 1.76e-12 68.2
Msa0629540 MtrunA17_Chr2g0276751 41.111 270 133 6 68 323 306 563 6.28e-60 201
Msa0629540 MtrunA17_Chr1g0187241 39.286 252 143 3 81 323 316 566 2.14e-59 200
Msa0629540 MtrunA17_Chr1g0187241 52.055 73 33 1 1 71 154 226 2.89e-15 76.6
Msa0629540 MtrunA17_Chr7g0240381 38.113 265 146 4 69 325 306 560 3.09e-59 199
Msa0629540 MtrunA17_Chr7g0240381 45.588 68 37 0 1 68 153 220 7.59e-13 69.3
Msa0629540 MtrunA17_Chr2g0284701 41.016 256 138 3 81 323 333 588 5.77e-59 199
Msa0629540 MtrunA17_Chr2g0284701 41.176 68 40 0 1 68 161 228 9.98e-12 65.9
Msa0629540 MtrunA17_Chr7g0271221 42.353 255 130 5 80 323 298 546 1.67e-58 197
Msa0629540 MtrunA17_Chr4g0060071 41.532 248 134 4 86 323 52 298 4.50e-57 187
Msa0629540 MtrunA17_Chr6g0451841 39.394 264 146 4 71 324 277 536 5.53e-57 192
Msa0629540 MtrunA17_Chr3g0112611 39.216 255 144 3 81 325 318 571 6.64e-57 194
Msa0629540 MtrunA17_Chr3g0112611 47.059 68 36 0 1 68 155 222 2.50e-12 67.8
Msa0629540 MtrunA17_Chr7g0214731 40.076 262 141 5 77 323 352 612 4.00e-56 192
Msa0629540 MtrunA17_Chr7g0214731 48.529 68 35 0 1 68 193 260 2.83e-14 73.6
Msa0629540 MtrunA17_Chr1g0166771 42.308 234 120 3 81 306 281 507 4.48e-56 190
Msa0629540 MtrunA17_Chr1g0166771 45.205 73 38 1 1 71 119 191 3.39e-12 67.0
Msa0629540 MtrunA17_Chr4g0059991 38.462 273 150 5 68 323 302 573 1.41e-55 190
Msa0629540 MtrunA17_Chr8g0379991 42.336 274 140 5 68 323 291 564 1.68e-54 187
Msa0629540 MtrunA17_Chr8g0379971 42.238 277 143 5 68 327 319 595 2.55e-54 187
Msa0629540 MtrunA17_Chr8g0362711 39.924 263 138 5 72 323 318 571 2.72e-54 186
Msa0629540 MtrunA17_Chr8g0362711 51.471 68 33 0 1 68 150 217 5.69e-16 78.6
Msa0629540 MtrunA17_Chr1g0166731 40.562 249 138 3 84 323 214 461 3.27e-54 184
Msa0629540 MtrunA17_Chr1g0166731 53.425 73 32 1 1 71 50 122 1.72e-15 77.0
Msa0629540 MtrunA17_Chr8g0390331 41.065 263 137 6 74 320 293 553 3.56e-54 186
Msa0629540 MtrunA17_Chr1g0166741 39.749 239 129 3 74 304 310 541 3.69e-54 186
Msa0629540 MtrunA17_Chr1g0166741 49.315 73 35 1 1 71 155 227 1.85e-13 71.2
Msa0629540 MtrunA17_Chr4g0059971 36.331 278 151 5 68 324 313 585 5.27e-54 186
Msa0629540 MtrunA17_Chr1g0193391 40.157 254 135 5 81 323 299 546 6.70e-54 186
Msa0629540 MtrunA17_Chr7g0255611 36.940 268 156 4 72 328 314 579 2.15e-53 184
Msa0629540 MtrunA17_Chr7g0255611 41.176 68 40 0 1 68 155 222 7.97e-11 63.2
Msa0629540 MtrunA17_Chr2g0331521 38.023 263 146 4 74 320 302 563 3.24e-53 184
Msa0629540 MtrunA17_Chr5g0415961 38.866 247 140 3 86 323 328 572 5.32e-53 183
Msa0629540 MtrunA17_Chr5g0415961 45.588 68 37 0 1 68 150 217 3.21e-13 70.5
Msa0629540 MtrunA17_Chr1g0166791 37.200 250 147 3 83 323 316 564 9.33e-53 182
Msa0629540 MtrunA17_Chr1g0166791 46.575 73 37 1 1 71 152 224 1.93e-12 68.2
Msa0629540 MtrunA17_Chr4g0069581 39.474 266 139 6 74 323 258 517 9.61e-53 182
Msa0629540 MtrunA17_Chr1g0166711 39.759 249 140 3 84 323 317 564 5.18e-52 181
Msa0629540 MtrunA17_Chr1g0166711 56.164 73 30 1 1 71 153 225 3.97e-17 82.0
Msa0629540 MtrunA17_Chr3g0133341 43.874 253 126 5 83 325 306 552 1.81e-51 179
Msa0629540 MtrunA17_Chr3g0133341 42.647 68 39 0 1 68 145 212 1.11e-11 65.5
Msa0629540 MtrunA17_Chr4g0059981 34.296 277 164 5 68 327 310 585 4.86e-50 175
Msa0629540 MtrunA17_Chr4g0011041 39.516 248 136 5 83 320 335 578 4.53e-49 172
Msa0629540 MtrunA17_Chr1g0177611 38.956 249 134 5 81 320 196 435 5.32e-49 169
Msa0629540 MtrunA17_Chr7g0261721 40.299 201 111 2 132 323 1 201 2.61e-48 162
Msa0629540 MtrunA17_Chr1g0177591 38.956 249 134 5 81 320 325 564 5.30e-48 169
Msa0629540 MtrunA17_Chr1g0177631 38.306 248 137 4 81 320 196 435 9.10e-48 166
Msa0629540 MtrunA17_Chr2g0331481 34.940 249 148 4 81 317 317 563 1.01e-46 167
Msa0629540 MtrunA17_Chr2g0331471 34.940 249 148 4 81 317 380 626 2.33e-46 166
Msa0629540 MtrunA17_Chr8g0362781 31.343 268 172 3 70 326 318 584 5.91e-46 164
Msa0629540 MtrunA17_Chr5g0415841 33.088 272 170 3 69 329 198 468 8.90e-46 161
Msa0629540 MtrunA17_Chr2g0325961 36.653 251 136 4 83 325 315 550 2.17e-45 162
Msa0629540 MtrunA17_Chr2g0325951 36.653 251 137 4 83 325 313 549 8.34e-45 160
Msa0629540 MtrunA17_Chr4g0003761 34.483 261 157 4 72 320 311 569 1.55e-44 160
Msa0629540 MtrunA17_Chr1g0147631 36.822 258 150 3 70 317 307 561 2.93e-44 159
Msa0629540 MtrunA17_Chr1g0157611 34.231 260 157 4 71 320 299 554 5.78e-44 158
Msa0629540 MtrunA17_Chr2g0331511 34.413 247 150 3 81 317 315 559 8.64e-44 159
Msa0629540 MtrunA17_Chr2g0331461 33.865 251 148 5 81 317 317 563 4.51e-43 157
Msa0629540 MtrunA17_Chr1g0157601 33.333 261 161 4 72 320 294 553 3.00e-42 154
Msa0629540 MtrunA17_Chr1g0157621 32.411 253 160 3 78 320 266 517 3.35e-41 150
Msa0629540 MtrunA17_Chr7g0235521 30.566 265 172 3 70 325 200 461 6.48e-39 143
Msa0629540 MtrunA17_Chr7g0240131 30.566 265 172 3 70 325 200 461 1.03e-38 142
Msa0629540 MtrunA17_Chr2g0326211 33.466 251 144 4 83 325 314 549 1.20e-38 144
Msa0629540 MtrunA17_Chr7g0240181 30.566 265 172 3 70 325 200 461 1.35e-38 142
Msa0629540 MtrunA17_Chr7g0240211 30.566 265 172 3 70 325 200 461 1.51e-38 142
Msa0629540 MtrunA17_Chr7g0240271 30.943 265 171 3 70 325 311 572 2.08e-38 143
Msa0629540 MtrunA17_Chr4g0060001 33.600 250 153 4 81 320 323 569 5.34e-36 137
Msa0629540 MtrunA17_Chr7g0240281 32.707 266 165 5 70 325 313 574 2.30e-33 129
Msa0629540 MtrunA17_Chr7g0234381 34.025 241 143 5 88 320 186 418 1.31e-32 125
Msa0629540 MtrunA17_Chr7g0234181 34.025 241 143 4 88 320 181 413 2.38e-32 124
Msa0629540 MtrunA17_Chr7g0240151 29.057 265 158 4 70 325 200 443 2.75e-32 125
Msa0629540 MtrunA17_Chr7g0234151 34.025 241 143 5 88 320 186 418 2.82e-31 121
Msa0629540 MtrunA17_Chr2g0326221 29.707 239 132 5 95 325 15 225 1.34e-27 107
Msa0629540 MtrunA17_Chr7g0261751 40.000 140 75 2 83 213 358 497 1.01e-25 107
Msa0629540 MtrunA17_Chr7g0261751 47.945 73 36 1 1 71 160 232 4.28e-14 72.8
Msa0629540 MtrunA17_Chr3g0142111 58.824 68 28 0 1 68 171 238 5.35e-21 92.0
Msa0629540 MtrunA17_Chr3g0112651 53.030 66 31 0 1 66 57 122 4.43e-17 79.0
Msa0629540 MtrunA17_Chr4g0060061 46.053 76 41 0 1 76 23 98 1.40e-16 75.1
Msa0629540 MtrunA17_Chr7g0261731 51.515 66 32 0 1 66 160 225 7.29e-15 74.7
Msa0629540 MtrunA17_Chr7g0261831 36.364 99 55 2 78 168 57 155 1.79e-14 71.6
Msa0629540 MtrunA17_Chr7g0261821 43.750 64 36 0 261 324 1 64 2.39e-14 67.0
Msa0629540 MtrunA17_Chr1g0147581 33.333 123 72 3 178 297 1 116 1.95e-13 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0629540 AT3G54140.1 69.663 267 72 2 68 325 299 565 2.26e-130 384
Msa0629540 AT3G54140.1 80.882 68 13 0 1 68 146 213 1.44e-30 121
Msa0629540 AT3G54140.2 69.663 267 72 2 68 325 299 565 2.26e-130 384
Msa0629540 AT3G54140.2 80.882 68 13 0 1 68 146 213 1.44e-30 121
Msa0629540 AT5G01180.2 70.522 268 70 2 68 326 299 566 2.48e-129 381
Msa0629540 AT5G01180.2 75.362 69 17 0 1 69 146 214 9.71e-29 116
Msa0629540 AT5G01180.3 70.522 268 70 2 68 326 299 566 2.48e-129 381
Msa0629540 AT5G01180.3 75.362 69 17 0 1 69 146 214 9.71e-29 116
Msa0629540 AT5G01180.1 70.522 268 70 2 68 326 299 566 2.48e-129 381
Msa0629540 AT5G01180.1 75.362 69 17 0 1 69 146 214 9.71e-29 116
Msa0629540 AT2G02020.1 45.714 385 145 7 1 325 165 545 1.36e-109 330
Msa0629540 AT2G02040.1 55.390 269 106 4 69 326 319 584 2.03e-99 305
Msa0629540 AT2G02040.1 72.727 66 18 0 1 66 164 229 8.80e-25 105
Msa0629540 AT2G02020.2 43.407 364 163 8 1 325 165 524 1.03e-91 283
Msa0629540 AT1G62200.1 50.000 252 110 3 81 324 345 588 3.61e-84 265
Msa0629540 AT1G62200.1 71.212 66 19 0 1 66 178 243 8.99e-25 105
Msa0629540 AT1G62200.2 50.000 252 110 3 81 324 374 617 1.08e-83 265
Msa0629540 AT1G62200.2 71.212 66 19 0 1 66 178 243 1.03e-24 105
Msa0629540 AT1G62200.3 50.000 252 110 3 81 324 388 631 1.32e-83 265
Msa0629540 AT1G62200.3 71.212 66 19 0 1 66 192 257 1.20e-24 105
Msa0629540 AT1G72140.1 35.589 399 182 6 1 324 155 553 7.25e-80 253
Msa0629540 AT1G68570.2 46.863 271 131 4 68 325 270 540 1.54e-73 237
Msa0629540 AT1G68570.2 50.000 56 28 0 11 66 127 182 8.09e-12 66.6
Msa0629540 AT1G32450.1 45.914 257 129 3 73 320 326 581 2.19e-73 238
Msa0629540 AT1G68570.1 46.863 271 131 4 68 325 300 570 2.27e-73 238
Msa0629540 AT1G68570.1 50.000 56 28 0 11 66 157 212 9.36e-12 66.2
Msa0629540 AT5G19640.1 44.981 269 124 7 68 327 333 586 3.47e-72 234
Msa0629540 AT2G26690.3 47.773 247 116 4 79 317 266 507 1.19e-70 229
Msa0629540 AT2G26690.2 47.773 247 116 4 79 317 278 519 1.38e-70 229
Msa0629540 AT2G26690.1 47.773 247 116 4 79 317 311 552 2.70e-70 229
Msa0629540 AT4G21680.1 44.403 268 135 4 70 324 308 574 3.74e-70 229
Msa0629540 AT3G54450.1 42.353 255 136 3 81 325 291 544 5.28e-69 225
Msa0629540 AT3G54450.1 47.692 65 34 0 1 65 121 185 7.04e-12 66.6
Msa0629540 AT1G72130.2 40.081 247 135 2 86 324 175 416 6.12e-66 213
Msa0629540 AT1G72130.2 46.154 65 35 0 1 65 22 86 2.84e-11 64.7
Msa0629540 AT1G72130.3 40.081 247 135 2 86 324 175 416 6.12e-66 213
Msa0629540 AT1G72130.3 46.154 65 35 0 1 65 22 86 2.84e-11 64.7
Msa0629540 AT1G72130.1 40.081 247 135 2 86 324 293 534 1.03e-64 213
Msa0629540 AT1G72130.1 46.154 65 35 0 1 65 140 204 3.83e-11 64.3
Msa0629540 AT1G22540.1 40.400 250 139 2 86 325 305 554 2.30e-63 210
Msa0629540 AT1G22540.1 51.515 66 32 0 1 66 151 216 5.10e-13 70.1
Msa0629540 AT1G69870.1 42.537 268 139 6 68 323 330 594 7.98e-61 205
Msa0629540 AT1G27040.3 40.909 264 140 4 68 322 272 528 1.28e-60 202
Msa0629540 AT1G27040.3 45.588 68 37 0 1 68 121 188 1.01e-13 72.4
Msa0629540 AT1G27040.2 40.909 264 140 4 68 322 300 556 2.37e-60 202
Msa0629540 AT1G27040.2 45.588 68 37 0 1 68 149 216 1.16e-13 72.0
Msa0629540 AT1G27040.1 42.169 249 134 3 83 322 313 560 2.78e-60 202
Msa0629540 AT1G27040.1 45.588 68 37 0 1 68 153 220 1.17e-13 72.0
Msa0629540 AT3G21670.1 42.629 251 125 4 81 323 319 558 1.65e-59 201
Msa0629540 AT3G21670.1 52.941 68 32 0 1 68 157 224 9.66e-15 75.5
Msa0629540 AT1G22550.1 39.921 253 142 3 86 328 312 564 3.81e-59 199
Msa0629540 AT1G22550.1 44.615 65 36 0 1 65 156 220 3.03e-12 67.8
Msa0629540 AT1G59740.1 43.265 245 123 4 81 315 331 569 9.91e-58 196
Msa0629540 AT1G59740.1 44.286 70 35 1 1 66 167 236 8.29e-12 66.6
Msa0629540 AT1G69850.1 41.129 248 135 4 86 323 333 579 3.69e-57 194
Msa0629540 AT1G69850.1 47.059 68 36 0 1 68 148 215 1.62e-14 74.7
Msa0629540 AT3G53960.1 36.704 267 157 4 69 325 311 575 2.12e-56 193
Msa0629540 AT3G53960.1 48.529 68 35 0 1 68 158 225 2.42e-13 71.2
Msa0629540 AT1G33440.1 40.239 251 132 4 77 315 318 562 2.17e-56 192
Msa0629540 AT2G40460.1 40.081 247 139 2 86 323 309 555 2.35e-56 192
Msa0629540 AT2G40460.1 56.061 66 29 0 1 66 146 211 8.05e-16 78.6
Msa0629540 AT1G72120.1 40.400 250 139 2 89 328 308 557 1.17e-55 190
Msa0629540 AT1G72120.1 45.588 68 37 0 1 68 147 214 3.71e-13 70.5
Msa0629540 AT1G18880.1 36.364 275 158 4 68 325 294 568 1.55e-54 187
Msa0629540 AT5G13400.1 37.918 269 153 4 68 325 348 613 6.69e-54 186
Msa0629540 AT5G13400.1 45.070 71 39 0 1 71 194 264 4.55e-14 73.6
Msa0629540 AT1G72125.1 38.800 250 143 2 86 325 309 558 1.95e-53 184
Msa0629540 AT1G72125.1 51.515 66 32 0 1 66 147 212 6.06e-14 72.8
Msa0629540 AT5G14940.1 37.109 256 147 5 77 320 285 538 3.73e-53 183
Msa0629540 AT1G12110.1 36.882 263 154 4 70 324 312 570 8.14e-53 183
Msa0629540 AT1G12110.1 49.231 65 31 1 7 69 159 223 2.20e-13 71.2
Msa0629540 AT2G37900.2 36.226 265 153 4 69 325 233 489 1.18e-52 181
Msa0629540 AT2G37900.2 48.529 68 35 0 1 68 80 147 4.71e-13 70.1
Msa0629540 AT5G46050.2 41.410 227 122 3 83 299 203 428 2.71e-52 179
Msa0629540 AT5G46050.2 49.315 73 35 1 1 71 41 113 1.82e-14 74.3
Msa0629540 AT2G37900.1 36.226 265 153 4 69 325 312 568 4.80e-52 181
Msa0629540 AT2G37900.1 48.529 68 35 0 1 68 159 226 4.79e-13 70.1
Msa0629540 AT5G46050.1 41.410 227 122 3 83 299 315 540 3.00e-51 179
Msa0629540 AT5G46050.1 49.315 73 35 1 1 71 153 225 2.77e-14 73.9
Msa0629540 AT1G22570.2 37.945 253 144 3 86 328 279 528 2.57e-50 175
Msa0629540 AT1G22570.2 41.176 68 40 0 1 68 116 183 2.37e-11 65.1
Msa0629540 AT1G22570.1 37.945 253 144 3 86 328 316 565 3.69e-50 175
Msa0629540 AT1G22570.1 41.176 68 40 0 1 68 153 220 2.87e-11 64.7
Msa0629540 AT1G52190.1 34.387 253 152 4 81 320 315 566 3.07e-49 174
Msa0629540 AT5G62730.2 38.023 263 146 5 77 324 267 527 9.83e-49 171
Msa0629540 AT5G62730.2 46.667 75 38 1 1 73 107 181 7.20e-14 72.8
Msa0629540 AT5G62730.1 38.023 263 146 5 77 324 326 586 3.00e-48 171
Msa0629540 AT5G62730.1 46.667 75 38 1 1 73 166 240 8.99e-14 72.4
Msa0629540 AT1G27080.2 36.782 261 140 6 81 329 265 512 1.19e-47 168
Msa0629540 AT1G27080.1 36.782 261 140 6 81 329 307 554 1.64e-47 168
Msa0629540 AT5G46040.1 39.841 251 140 3 83 323 315 564 6.15e-47 167
Msa0629540 AT5G46040.1 47.945 73 36 1 1 71 153 225 3.16e-14 73.9
Msa0629540 AT5G11570.1 30.286 350 203 8 3 320 136 476 6.43e-47 165
Msa0629540 AT3G47960.1 36.047 258 149 5 81 323 352 608 8.60e-47 167
Msa0629540 AT3G01350.1 35.741 263 156 4 69 318 284 546 1.29e-46 166
Msa0629540 AT3G45650.1 33.704 270 159 5 68 325 284 545 3.69e-46 164
Msa0629540 AT3G16180.1 36.090 266 150 6 73 320 302 565 5.26e-46 164
Msa0629540 AT5G62680.1 34.307 274 161 6 68 323 320 592 2.34e-45 163
Msa0629540 AT3G45660.1 33.708 267 158 5 70 327 290 546 5.76e-44 159
Msa0629540 AT3G45660.3 33.708 267 158 5 70 327 290 546 5.76e-44 159
Msa0629540 AT3G45660.2 33.962 265 156 5 70 325 311 565 6.84e-44 159
Msa0629540 AT3G45650.2 31.081 296 158 6 68 325 284 571 1.26e-41 152
Msa0629540 AT3G45720.1 30.855 269 160 5 68 325 289 542 1.45e-41 152
Msa0629540 AT3G45680.1 31.621 253 150 5 81 325 307 544 4.47e-40 148
Msa0629540 AT3G45710.1 30.040 253 155 4 81 325 308 546 9.16e-38 142
Msa0629540 AT5G28470.2 31.250 256 161 6 83 327 310 561 1.16e-36 139
Msa0629540 AT3G45700.1 28.731 268 165 5 68 327 287 536 5.03e-36 137
Msa0629540 AT3G25260.1 34.583 240 139 5 87 320 288 515 2.13e-34 132
Msa0629540 AT5G28470.1 30.859 256 160 7 83 327 310 559 9.16e-34 130
Msa0629540 AT1G69860.1 35.659 258 141 5 83 327 308 553 8.43e-32 125
Msa0629540 AT3G25280.1 33.473 239 146 3 89 320 289 521 2.77e-31 123
Msa0629540 AT2G38100.1 27.068 266 169 7 69 321 248 501 2.32e-24 103
Msa0629540 AT2G38100.3 27.068 266 169 7 69 321 254 507 2.42e-24 103
Msa0629540 AT2G38100.2 27.068 266 169 7 69 321 232 485 2.92e-24 103
Msa0629540 AT3G45690.1 27.444 266 133 8 68 325 288 501 5.71e-23 99.8

Find 77 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTATCTATTGATTGCTAAT+AGG 0.295604 4_3:-10397546 Msa0629540:CDS
TTGCTTCCTTGGTGTTGGTT+TGG 0.331667 4_3:-10399007 Msa0629540:CDS
CCATCCCTATGTCGATCTTC+TGG 0.340879 4_3:-10397855 Msa0629540:CDS
CGTTCATTTACTCCCCGTTT+GGG 0.351133 4_3:-10398214 Msa0629540:CDS
TGACCCCTATTCATATTATC+TGG 0.356962 4_3:+10397622 None:intergenic
GTGCAGAGCCTCCATGGATT+TGG 0.362434 4_3:+10398267 None:intergenic
TCGTTCATTTACTCCCCGTT+TGG 0.368157 4_3:-10398215 Msa0629540:CDS
TGGTGCACTCATTGCTTCCT+TGG 0.383081 4_3:-10399018 Msa0629540:CDS
TGCAACAGTATACAGTCAAA+TGG 0.413873 4_3:-10398175 Msa0629540:CDS
GGATTCCAGATAATATGAAT+AGG 0.414072 4_3:-10397627 Msa0629540:CDS
TTCACTCACAACTAATGCAT+TGG 0.422202 4_3:-10397719 Msa0629540:CDS
TATTTGATTGCGCTTGGAAC+CGG 0.428885 4_3:-10399155 Msa0629540:CDS
TAGAATCCTGGCCACGATCA+TGG 0.432457 4_3:+10397930 None:intergenic
ACTCATTGCTTCCTTGGTGT+TGG 0.432575 4_3:-10399012 Msa0629540:CDS
GATTCCAGATAATATGAATA+GGG 0.442981 4_3:-10397626 Msa0629540:CDS
ATGAATGTCGGATGGGGATG+GGG 0.453174 4_3:-10398978 Msa0629540:intron
GCACTCTATTTGATTGCGCT+TGG 0.455438 4_3:-10399161 Msa0629540:CDS
GTCACCTTGATTACTTCTAC+TGG 0.456121 4_3:-10397603 Msa0629540:CDS
TCACTCACAACTAATGCATT+GGG 0.458337 4_3:-10397718 Msa0629540:CDS
GATATCAGTGATGCCCAAAC+GGG 0.459760 4_3:+10398201 None:intergenic
TGACACTTAGAGTGTCGAAA+AGG 0.462376 4_3:+10398073 None:intergenic
GATGAATGTCGGATGGGGAT+GGG 0.465810 4_3:-10398979 Msa0629540:CDS
GCTGTGTGAATCCGTGTTCA+TGG 0.471308 4_3:+10397992 None:intergenic
AGATGAATGTCGGATGGGGA+TGG 0.477086 4_3:-10398980 Msa0629540:CDS
TTCACACAGCTTCAAAGAAT+CGG 0.484967 4_3:-10397979 Msa0629540:CDS
GGATATCAGTGATGCCCAAA+CGG 0.494408 4_3:+10398200 None:intergenic
GGAACCATGTTTGTGTTACA+AGG 0.495089 4_3:-10398153 Msa0629540:CDS
GCGGATGACTTCTAGAATCC+TGG 0.497553 4_3:+10397918 None:intergenic
CAAGGAATGGAAGTCTTGGT+TGG 0.505721 4_3:-10397648 Msa0629540:CDS
ACAAAAGTTACTACAAGGAA+TGG 0.510405 4_3:-10397661 Msa0629540:CDS
GCAACAGTATACAGTCAAAT+GGG 0.512639 4_3:-10398174 Msa0629540:CDS
GACACTTAGAGTGTCGAAAA+GGG 0.515286 4_3:+10398074 None:intergenic
TCATTTCCATGATCGTGGCC+AGG 0.515566 4_3:-10397936 Msa0629540:CDS
CGGTGAACTTTCTTGCGAAA+GGG 0.518248 4_3:+10398016 None:intergenic
CACAAACTTCTCATAGCATC+AGG 0.521942 4_3:+10397751 None:intergenic
AAGAAAACAATGAGATTGAG+AGG 0.524180 4_3:-10399088 Msa0629540:CDS
TTTCACTAATATCGGTCAGA+TGG 0.527060 4_3:-10397794 Msa0629540:CDS
TAAAAGATTTACCAAATCCA+TGG 0.527890 4_3:-10398278 Msa0629540:CDS
GTTACTGTGCAGAGCCTCCA+TGG 0.528525 4_3:+10398261 None:intergenic
CCGGTGAACTTTCTTGCGAA+AGG 0.533554 4_3:+10398015 None:intergenic
AACATACGGTTTGATACTGC+CGG 0.536716 4_3:+10399136 None:intergenic
ACTACAAGGAATGGAAGTCT+TGG 0.537544 4_3:-10397652 Msa0629540:CDS
AAAAGGGAGAGGGAGGCTGA+TGG 0.541173 4_3:+10398090 None:intergenic
CAGCTTCAAAGAATCGGAAT+CGG 0.543032 4_3:-10397973 Msa0629540:CDS
AAAGCCAGTAGAAGTAATCA+AGG 0.551397 4_3:+10397599 None:intergenic
TGTGAATCCGTGTTCATGGC+CGG 0.553955 4_3:+10397996 None:intergenic
ACTTGCCAGAAGATCGACAT+AGG 0.569304 4_3:+10397850 None:intergenic
GGATACAGATGAATGTCGGA+TGG 0.573725 4_3:-10398986 Msa0629540:CDS
TTGCGAAAGGGACGATGTGA+CGG 0.575377 4_3:+10398028 None:intergenic
TGGAAATGATTGAGATGACT+AGG 0.582009 4_3:+10397950 None:intergenic
TTAGAGTGTCGAAAAGGGAG+AGG 0.583008 4_3:+10398079 None:intergenic
TTGACTGTATACTGTTGCAA+AGG 0.586166 4_3:+10398179 None:intergenic
GATACAGATGAATGTCGGAT+GGG 0.590289 4_3:-10398985 Msa0629540:CDS
GCACTAAAAGATGAAACATA+CGG 0.594259 4_3:+10399122 None:intergenic
CAGTAGAGACAGAATCCGAC+CGG 0.595827 4_3:-10398302 Msa0629540:CDS
TAGAGTGTCGAAAAGGGAGA+GGG 0.597883 4_3:+10398080 None:intergenic
CTCAATCATTTCCATGATCG+TGG 0.604433 4_3:-10397941 Msa0629540:CDS
AGTGTCGAAAAGGGAGAGGG+AGG 0.610825 4_3:+10398083 None:intergenic
CCAGAAGATCGACATAGGGA+TGG 0.612471 4_3:+10397855 None:intergenic
AAGTTCACCGGCCATGAACA+CGG 0.612897 4_3:-10398003 Msa0629540:CDS
TTGTCACAAAAGTTACTACA+AGG 0.623798 4_3:-10397666 Msa0629540:CDS
ATTCCAGATAATATGAATAG+GGG 0.635841 4_3:-10397625 Msa0629540:CDS
CCTTTCGCAAGAAAGTTCAC+CGG 0.638836 4_3:-10398015 Msa0629540:CDS
GTTTGGATACAGATGAATGT+CGG 0.639388 4_3:-10398990 Msa0629540:CDS
GTACCACAATATTTCCTCGT+AGG 0.648219 4_3:-10397829 Msa0629540:CDS
ATATTTCCTCGTAGGTGCCG+CGG 0.650119 4_3:-10397821 Msa0629540:CDS
ATACAGATGAATGTCGGATG+GGG 0.656151 4_3:-10398984 Msa0629540:CDS
CTTGCCAGAAGATCGACATA+GGG 0.656281 4_3:+10397851 None:intergenic
AACACAATGGATCAACACAT+TGG 0.661215 4_3:-10398129 Msa0629540:CDS
TGTGTTACAAGGCAACACAA+TGG 0.665398 4_3:-10398142 Msa0629540:CDS
AAACTTCCGCGGCACCTACG+AGG 0.673774 4_3:+10397815 None:intergenic
GATATTAGTGAAAACTTCCG+CGG 0.680571 4_3:+10397804 None:intergenic
GTTGCCTTGTAACACAAACA+TGG 0.693293 4_3:+10398149 None:intergenic
GCACCTACGAGGAAATATTG+TGG 0.699788 4_3:+10397826 None:intergenic
AAGATTTACCAAATCCATGG+AGG 0.713797 4_3:-10398275 Msa0629540:CDS
ATATCAGTGATGCCCAAACG+GGG 0.715747 4_3:+10398202 None:intergenic
CTGTATCCAAACCAACACCA+AGG 0.726544 4_3:+10399001 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCCTAAATTTTTTTTTTTA+CGG + chr4_3:10398070-10398089 None:intergenic 10.0%
!! CATAAAGATAAATATAAAAA+TGG + chr4_3:10398212-10398231 None:intergenic 10.0%
!!! TTCCTAAATTTTTTTTTTTA+CGG + chr4_3:10398070-10398089 None:intergenic 10.0%
!! CATAAAGATAAATATAAAAA+TGG + chr4_3:10398212-10398231 None:intergenic 10.0%
!!! TTTTACTTCTCAATTAATAT+TGG - chr4_3:10397636-10397655 Msa0629540:CDS 15.0%
!! TACCGTAAAAAAAAAAATTT+AGG - chr4_3:10398065-10398084 Msa0629540:intron 15.0%
!! AAAAAAAAATTTAGGAAACT+TGG - chr4_3:10398073-10398092 Msa0629540:intron 15.0%
!! AAAAAAAATTTAGGAAACTT+GGG - chr4_3:10398074-10398093 Msa0629540:intron 15.0%
!!! TTTTACTTCTCAATTAATAT+TGG - chr4_3:10397636-10397655 Msa0629540:CDS 15.0%
!! TACCGTAAAAAAAAAAATTT+AGG - chr4_3:10398065-10398084 Msa0629540:intron 15.0%
!! AAAAAAAAATTTAGGAAACT+TGG - chr4_3:10398073-10398092 Msa0629540:intron 15.0%
!! AAAAAAAATTTAGGAAACTT+GGG - chr4_3:10398074-10398093 Msa0629540:intron 15.0%
!!! ATGAAGTTTAGAATAAGAAA+AGG + chr4_3:10398254-10398273 None:intergenic 20.0%
!!! ATGAAGTTTAGAATAAGAAA+AGG + chr4_3:10398254-10398273 None:intergenic 20.0%
!! TCTCATTGTTTTCTTCAAAT+TGG + chr4_3:10397581-10397600 None:intergenic 25.0%
!! GCCATTATATTTTTCTTCAT+CGG - chr4_3:10397750-10397769 Msa0629540:CDS 25.0%
! ACCGATGAAGAAAAATATAA+TGG + chr4_3:10397754-10397773 None:intergenic 25.0%
! ATAGAAAAATAATCCGTAAC+TGG - chr4_3:10397784-10397803 Msa0629540:CDS 25.0%
!!! TCTTTTTTTCTATCCAGTTA+CGG + chr4_3:10397800-10397819 None:intergenic 25.0%
!!! TATTGGCTCTTTAAAATTGT+TGG - chr4_3:10397971-10397990 Msa0629540:CDS 25.0%
!!! ATTGGCTCTTTAAAATTGTT+GGG - chr4_3:10397972-10397991 Msa0629540:CDS 25.0%
! AACTAGTGTTAATATTGAAG+GGG + chr4_3:10398003-10398022 None:intergenic 25.0%
! CAACTAGTGTTAATATTGAA+GGG + chr4_3:10398004-10398023 None:intergenic 25.0%
! ACAACTAGTGTTAATATTGA+AGG + chr4_3:10398005-10398024 None:intergenic 25.0%
! ATGTAGAATCTAACATCAAA+GGG - chr4_3:10398140-10398159 Msa0629540:CDS 25.0%
!! AAACAAATTTCCCTGATTTT+AGG - chr4_3:10398333-10398352 Msa0629540:intron 25.0%
!!! GATTTGGTAAATCTTTTATC+CGG + chr4_3:10398394-10398413 None:intergenic 25.0%
! TAAAAGATTTACCAAATCCA+TGG - chr4_3:10398396-10398415 Msa0629540:intron 25.0%
!!! GATCATAGTAGTTGTTTTTA+CGG + chr4_3:10398793-10398812 None:intergenic 25.0%
! GATTCCAGATAATATGAATA+GGG - chr4_3:10399048-10399067 Msa0629540:CDS 25.0%
! ATTCCAGATAATATGAATAG+GGG - chr4_3:10399049-10399068 Msa0629540:CDS 25.0%
!! TGTATCTATTGATTGCTAAT+AGG - chr4_3:10399128-10399147 Msa0629540:CDS 25.0%
!! TCTCATTGTTTTCTTCAAAT+TGG + chr4_3:10397581-10397600 None:intergenic 25.0%
!! GCCATTATATTTTTCTTCAT+CGG - chr4_3:10397750-10397769 Msa0629540:CDS 25.0%
! ACCGATGAAGAAAAATATAA+TGG + chr4_3:10397754-10397773 None:intergenic 25.0%
! ATAGAAAAATAATCCGTAAC+TGG - chr4_3:10397784-10397803 Msa0629540:CDS 25.0%
!!! TCTTTTTTTCTATCCAGTTA+CGG + chr4_3:10397800-10397819 None:intergenic 25.0%
!!! TATTGGCTCTTTAAAATTGT+TGG - chr4_3:10397971-10397990 Msa0629540:CDS 25.0%
!!! ATTGGCTCTTTAAAATTGTT+GGG - chr4_3:10397972-10397991 Msa0629540:CDS 25.0%
! AACTAGTGTTAATATTGAAG+GGG + chr4_3:10398003-10398022 None:intergenic 25.0%
! CAACTAGTGTTAATATTGAA+GGG + chr4_3:10398004-10398023 None:intergenic 25.0%
! ACAACTAGTGTTAATATTGA+AGG + chr4_3:10398005-10398024 None:intergenic 25.0%
! ATGTAGAATCTAACATCAAA+GGG - chr4_3:10398140-10398159 Msa0629540:CDS 25.0%
!! AAACAAATTTCCCTGATTTT+AGG - chr4_3:10398333-10398352 Msa0629540:intron 25.0%
!!! GATTTGGTAAATCTTTTATC+CGG + chr4_3:10398394-10398413 None:intergenic 25.0%
! TAAAAGATTTACCAAATCCA+TGG - chr4_3:10398396-10398415 Msa0629540:intron 25.0%
!!! GATCATAGTAGTTGTTTTTA+CGG + chr4_3:10398793-10398812 None:intergenic 25.0%
! GATTCCAGATAATATGAATA+GGG - chr4_3:10399048-10399067 Msa0629540:CDS 25.0%
! ATTCCAGATAATATGAATAG+GGG - chr4_3:10399049-10399068 Msa0629540:CDS 25.0%
!! TGTATCTATTGATTGCTAAT+AGG - chr4_3:10399128-10399147 Msa0629540:CDS 25.0%
GCACTAAAAGATGAAACATA+CGG + chr4_3:10397555-10397574 None:intergenic 30.0%
AAGAAAACAATGAGATTGAG+AGG - chr4_3:10397586-10397605 Msa0629540:CDS 30.0%
!!! AGAAAAGCTCTTTTTTCAAC+TGG - chr4_3:10397613-10397632 Msa0629540:CDS 30.0%
! ATACTTGTCTGCAAAGTTTT+TGG - chr4_3:10397911-10397930 Msa0629540:CDS 30.0%
! TACTTGTCTGCAAAGTTTTT+GGG - chr4_3:10397912-10397931 Msa0629540:CDS 30.0%
ATTGCAAATCATGCTTTAGT+AGG - chr4_3:10397936-10397955 Msa0629540:CDS 30.0%
!!! GTAGGTTTTTTCTCTTGTAT+TGG - chr4_3:10397954-10397973 Msa0629540:CDS 30.0%
TAAAGAAGAGACTTATCATC+TGG + chr4_3:10398109-10398128 None:intergenic 30.0%
GATGTAGAATCTAACATCAA+AGG - chr4_3:10398139-10398158 Msa0629540:CDS 30.0%
TATCCAAACACCTAAAATCA+GGG + chr4_3:10398346-10398365 None:intergenic 30.0%
TTATCCAAACACCTAAAATC+AGG + chr4_3:10398347-10398366 None:intergenic 30.0%
!! TGATTTTAGGTGTTTGGATA+AGG - chr4_3:10398346-10398365 Msa0629540:intron 30.0%
! GCTGATGGAATTTTGAATTT+AGG + chr4_3:10398572-10398591 None:intergenic 30.0%
TTGTCACAAAAGTTACTACA+AGG - chr4_3:10399008-10399027 Msa0629540:CDS 30.0%
ACAAAAGTTACTACAAGGAA+TGG - chr4_3:10399013-10399032 Msa0629540:CDS 30.0%
GGATTCCAGATAATATGAAT+AGG - chr4_3:10399047-10399066 Msa0629540:CDS 30.0%
ACAAAAAAGTGACTCATCTT+AGG - chr4_3:10399158-10399177 Msa0629540:CDS 30.0%
GCACTAAAAGATGAAACATA+CGG + chr4_3:10397555-10397574 None:intergenic 30.0%
AAGAAAACAATGAGATTGAG+AGG - chr4_3:10397586-10397605 Msa0629540:CDS 30.0%
!!! AGAAAAGCTCTTTTTTCAAC+TGG - chr4_3:10397613-10397632 Msa0629540:CDS 30.0%
! ATACTTGTCTGCAAAGTTTT+TGG - chr4_3:10397911-10397930 Msa0629540:CDS 30.0%
! TACTTGTCTGCAAAGTTTTT+GGG - chr4_3:10397912-10397931 Msa0629540:CDS 30.0%
ATTGCAAATCATGCTTTAGT+AGG - chr4_3:10397936-10397955 Msa0629540:CDS 30.0%
!!! GTAGGTTTTTTCTCTTGTAT+TGG - chr4_3:10397954-10397973 Msa0629540:CDS 30.0%
TAAAGAAGAGACTTATCATC+TGG + chr4_3:10398109-10398128 None:intergenic 30.0%
GATGTAGAATCTAACATCAA+AGG - chr4_3:10398139-10398158 Msa0629540:CDS 30.0%
TATCCAAACACCTAAAATCA+GGG + chr4_3:10398346-10398365 None:intergenic 30.0%
TTATCCAAACACCTAAAATC+AGG + chr4_3:10398347-10398366 None:intergenic 30.0%
!! TGATTTTAGGTGTTTGGATA+AGG - chr4_3:10398346-10398365 Msa0629540:intron 30.0%
! GCTGATGGAATTTTGAATTT+AGG + chr4_3:10398572-10398591 None:intergenic 30.0%
TTGTCACAAAAGTTACTACA+AGG - chr4_3:10399008-10399027 Msa0629540:CDS 30.0%
ACAAAAGTTACTACAAGGAA+TGG - chr4_3:10399013-10399032 Msa0629540:CDS 30.0%
GGATTCCAGATAATATGAAT+AGG - chr4_3:10399047-10399066 Msa0629540:CDS 30.0%
GTTTGGATACAGATGAATGT+CGG - chr4_3:10397684-10397703 Msa0629540:CDS 35.0%
! TTTTCTTCATCGGTAGTAGA+TGG - chr4_3:10397760-10397779 Msa0629540:CDS 35.0%
CTGGATAGAAAAAAAGACTC+TGG - chr4_3:10397803-10397822 Msa0629540:CDS 35.0%
!! ATGGATTGGTTGTTAGAGTA+TGG - chr4_3:10397870-10397889 Msa0629540:CDS 35.0%
GGTTGTTAGAGTATGGAATT+TGG - chr4_3:10397877-10397896 Msa0629540:CDS 35.0%
AACTTTGCAGACAAGTATGA+GGG + chr4_3:10397909-10397928 None:intergenic 35.0%
AAACTTTGCAGACAAGTATG+AGG + chr4_3:10397910-10397929 None:intergenic 35.0%
! CATTTGTGTGTTCAAGTTTC+CGG + chr4_3:10398168-10398187 None:intergenic 35.0%
!! TTTCCCTGATTTTAGGTGTT+TGG - chr4_3:10398340-10398359 Msa0629540:intron 35.0%
! TGGTAAATCTTTTATCCGGT+CGG + chr4_3:10398390-10398409 None:intergenic 35.0%
AAGATTTACCAAATCCATGG+AGG - chr4_3:10398399-10398418 Msa0629540:intron 35.0%
TTGACTGTATACTGTTGCAA+AGG + chr4_3:10398498-10398517 None:intergenic 35.0%
TGCAACAGTATACAGTCAAA+TGG - chr4_3:10398499-10398518 Msa0629540:intron 35.0%
GCAACAGTATACAGTCAAAT+GGG - chr4_3:10398500-10398519 Msa0629540:intron 35.0%
AACACAATGGATCAACACAT+TGG - chr4_3:10398545-10398564 Msa0629540:intron 35.0%
TTCACACAGCTTCAAAGAAT+CGG - chr4_3:10398695-10398714 Msa0629540:intron 35.0%
TGGAAATGATTGAGATGACT+AGG + chr4_3:10398727-10398746 None:intergenic 35.0%
GATATTAGTGAAAACTTCCG+CGG + chr4_3:10398873-10398892 None:intergenic 35.0%
! GCGGAAGTTTTCACTAATAT+CGG - chr4_3:10398872-10398891 Msa0629540:intron 35.0%
TTTCACTAATATCGGTCAGA+TGG - chr4_3:10398880-10398899 Msa0629540:intron 35.0%
TTCACTCACAACTAATGCAT+TGG - chr4_3:10398955-10398974 Msa0629540:intron 35.0%
TCACTCACAACTAATGCATT+GGG - chr4_3:10398956-10398975 Msa0629540:intron 35.0%
TGACCCCTATTCATATTATC+TGG + chr4_3:10399055-10399074 None:intergenic 35.0%
AAAGCCAGTAGAAGTAATCA+AGG + chr4_3:10399078-10399097 None:intergenic 35.0%
GTTTGGATACAGATGAATGT+CGG - chr4_3:10397684-10397703 Msa0629540:CDS 35.0%
! TTTTCTTCATCGGTAGTAGA+TGG - chr4_3:10397760-10397779 Msa0629540:CDS 35.0%
CTGGATAGAAAAAAAGACTC+TGG - chr4_3:10397803-10397822 Msa0629540:CDS 35.0%
!! ATGGATTGGTTGTTAGAGTA+TGG - chr4_3:10397870-10397889 Msa0629540:CDS 35.0%
GGTTGTTAGAGTATGGAATT+TGG - chr4_3:10397877-10397896 Msa0629540:CDS 35.0%
AACTTTGCAGACAAGTATGA+GGG + chr4_3:10397909-10397928 None:intergenic 35.0%
AAACTTTGCAGACAAGTATG+AGG + chr4_3:10397910-10397929 None:intergenic 35.0%
! CATTTGTGTGTTCAAGTTTC+CGG + chr4_3:10398168-10398187 None:intergenic 35.0%
!! TTTCCCTGATTTTAGGTGTT+TGG - chr4_3:10398340-10398359 Msa0629540:intron 35.0%
! TGGTAAATCTTTTATCCGGT+CGG + chr4_3:10398390-10398409 None:intergenic 35.0%
AAGATTTACCAAATCCATGG+AGG - chr4_3:10398399-10398418 Msa0629540:intron 35.0%
TTGACTGTATACTGTTGCAA+AGG + chr4_3:10398498-10398517 None:intergenic 35.0%
TGCAACAGTATACAGTCAAA+TGG - chr4_3:10398499-10398518 Msa0629540:intron 35.0%
GCAACAGTATACAGTCAAAT+GGG - chr4_3:10398500-10398519 Msa0629540:intron 35.0%
AACACAATGGATCAACACAT+TGG - chr4_3:10398545-10398564 Msa0629540:intron 35.0%
TTCACACAGCTTCAAAGAAT+CGG - chr4_3:10398695-10398714 Msa0629540:intron 35.0%
TGGAAATGATTGAGATGACT+AGG + chr4_3:10398727-10398746 None:intergenic 35.0%
GATATTAGTGAAAACTTCCG+CGG + chr4_3:10398873-10398892 None:intergenic 35.0%
! GCGGAAGTTTTCACTAATAT+CGG - chr4_3:10398872-10398891 Msa0629540:intron 35.0%
TTTCACTAATATCGGTCAGA+TGG - chr4_3:10398880-10398899 Msa0629540:intron 35.0%
TTCACTCACAACTAATGCAT+TGG - chr4_3:10398955-10398974 Msa0629540:intron 35.0%
TCACTCACAACTAATGCATT+GGG - chr4_3:10398956-10398975 Msa0629540:intron 35.0%
TGACCCCTATTCATATTATC+TGG + chr4_3:10399055-10399074 None:intergenic 35.0%
AAAGCCAGTAGAAGTAATCA+AGG + chr4_3:10399078-10399097 None:intergenic 35.0%
TATTTGATTGCGCTTGGAAC+CGG - chr4_3:10397519-10397538 Msa0629540:CDS 40.0%
AACATACGGTTTGATACTGC+CGG + chr4_3:10397541-10397560 None:intergenic 40.0%
GATACAGATGAATGTCGGAT+GGG - chr4_3:10397689-10397708 Msa0629540:CDS 40.0%
ATACAGATGAATGTCGGATG+GGG - chr4_3:10397690-10397709 Msa0629540:CDS 40.0%
ATTCTCACATCTCCTTTGTC+AGG - chr4_3:10397826-10397845 Msa0629540:CDS 40.0%
TAGAAGATGGAAGCTGTTGA+TGG - chr4_3:10397851-10397870 Msa0629540:CDS 40.0%
AATCTAACATCAAAGGGAGC+CGG - chr4_3:10398146-10398165 Msa0629540:CDS 40.0%
GGAACCATGTTTGTGTTACA+AGG - chr4_3:10398521-10398540 Msa0629540:intron 40.0%
GTTGCCTTGTAACACAAACA+TGG + chr4_3:10398528-10398547 None:intergenic 40.0%
TGTGTTACAAGGCAACACAA+TGG - chr4_3:10398532-10398551 Msa0629540:intron 40.0%
!! GACACTTAGAGTGTCGAAAA+GGG + chr4_3:10398603-10398622 None:intergenic 40.0%
!! TGACACTTAGAGTGTCGAAA+AGG + chr4_3:10398604-10398623 None:intergenic 40.0%
ACACTCTAAGTGTCATCTTC+TGG - chr4_3:10398609-10398628 Msa0629540:intron 40.0%
CACTCTAAGTGTCATCTTCT+GGG - chr4_3:10398610-10398629 Msa0629540:intron 40.0%
CAGCTTCAAAGAATCGGAAT+CGG - chr4_3:10398701-10398720 Msa0629540:intron 40.0%
CTCAATCATTTCCATGATCG+TGG - chr4_3:10398733-10398752 Msa0629540:intron 40.0%
!! TGTTTTTACGGACAATGTCG+AGG + chr4_3:10398781-10398800 None:intergenic 40.0%
GTACCACAATATTTCCTCGT+AGG - chr4_3:10398845-10398864 Msa0629540:intron 40.0%
! GGTCAGATGGAGTTCTTTTA+TGG - chr4_3:10398893-10398912 Msa0629540:intron 40.0%
! GATGGAGTTCTTTTATGGTC+AGG - chr4_3:10398898-10398917 Msa0629540:intron 40.0%
CACAAACTTCTCATAGCATC+AGG + chr4_3:10398926-10398945 None:intergenic 40.0%
ACTACAAGGAATGGAAGTCT+TGG - chr4_3:10399022-10399041 Msa0629540:CDS 40.0%
GTCACCTTGATTACTTCTAC+TGG - chr4_3:10399071-10399090 Msa0629540:CDS 40.0%
TATTTGATTGCGCTTGGAAC+CGG - chr4_3:10397519-10397538 Msa0629540:CDS 40.0%
AACATACGGTTTGATACTGC+CGG + chr4_3:10397541-10397560 None:intergenic 40.0%
GATACAGATGAATGTCGGAT+GGG - chr4_3:10397689-10397708 Msa0629540:CDS 40.0%
ATACAGATGAATGTCGGATG+GGG - chr4_3:10397690-10397709 Msa0629540:CDS 40.0%
ATTCTCACATCTCCTTTGTC+AGG - chr4_3:10397826-10397845 Msa0629540:CDS 40.0%
TAGAAGATGGAAGCTGTTGA+TGG - chr4_3:10397851-10397870 Msa0629540:CDS 40.0%
AATCTAACATCAAAGGGAGC+CGG - chr4_3:10398146-10398165 Msa0629540:CDS 40.0%
GGAACCATGTTTGTGTTACA+AGG - chr4_3:10398521-10398540 Msa0629540:intron 40.0%
GTTGCCTTGTAACACAAACA+TGG + chr4_3:10398528-10398547 None:intergenic 40.0%
TGTGTTACAAGGCAACACAA+TGG - chr4_3:10398532-10398551 Msa0629540:intron 40.0%
!! GACACTTAGAGTGTCGAAAA+GGG + chr4_3:10398603-10398622 None:intergenic 40.0%
!! TGACACTTAGAGTGTCGAAA+AGG + chr4_3:10398604-10398623 None:intergenic 40.0%
ACACTCTAAGTGTCATCTTC+TGG - chr4_3:10398609-10398628 Msa0629540:intron 40.0%
CACTCTAAGTGTCATCTTCT+GGG - chr4_3:10398610-10398629 Msa0629540:intron 40.0%
CAGCTTCAAAGAATCGGAAT+CGG - chr4_3:10398701-10398720 Msa0629540:intron 40.0%
CTCAATCATTTCCATGATCG+TGG - chr4_3:10398733-10398752 Msa0629540:intron 40.0%
!! TGTTTTTACGGACAATGTCG+AGG + chr4_3:10398781-10398800 None:intergenic 40.0%
GTACCACAATATTTCCTCGT+AGG - chr4_3:10398845-10398864 Msa0629540:intron 40.0%
! GGTCAGATGGAGTTCTTTTA+TGG - chr4_3:10398893-10398912 Msa0629540:intron 40.0%
! GATGGAGTTCTTTTATGGTC+AGG - chr4_3:10398898-10398917 Msa0629540:intron 40.0%
CACAAACTTCTCATAGCATC+AGG + chr4_3:10398926-10398945 None:intergenic 40.0%
ACTACAAGGAATGGAAGTCT+TGG - chr4_3:10399022-10399041 Msa0629540:CDS 40.0%
GTCACCTTGATTACTTCTAC+TGG - chr4_3:10399071-10399090 Msa0629540:CDS 40.0%
! ACTCATTGCTTCCTTGGTGT+TGG - chr4_3:10397662-10397681 Msa0629540:CDS 45.0%
!! TTGCTTCCTTGGTGTTGGTT+TGG - chr4_3:10397667-10397686 Msa0629540:CDS 45.0%
CTGTATCCAAACCAACACCA+AGG + chr4_3:10397676-10397695 None:intergenic 45.0%
GGATACAGATGAATGTCGGA+TGG - chr4_3:10397688-10397707 Msa0629540:CDS 45.0%
CCATCTTCTATGCCTGACAA+AGG + chr4_3:10397841-10397860 None:intergenic 45.0%
CCTTTGTCAGGCATAGAAGA+TGG - chr4_3:10397838-10397857 Msa0629540:CDS 45.0%
! GATGGAAGCTGTTGATGGAT+TGG - chr4_3:10397856-10397875 Msa0629540:CDS 45.0%
TCGTTCATTTACTCCCCGTT+TGG - chr4_3:10398459-10398478 Msa0629540:intron 45.0%
CGTTCATTTACTCCCCGTTT+GGG - chr4_3:10398460-10398479 Msa0629540:intron 45.0%
ATATCAGTGATGCCCAAACG+GGG + chr4_3:10398475-10398494 None:intergenic 45.0%
GATATCAGTGATGCCCAAAC+GGG + chr4_3:10398476-10398495 None:intergenic 45.0%
GGATATCAGTGATGCCCAAA+CGG + chr4_3:10398477-10398496 None:intergenic 45.0%
!! TAGAGTGTCGAAAAGGGAGA+GGG + chr4_3:10398597-10398616 None:intergenic 45.0%
!! TTAGAGTGTCGAAAAGGGAG+AGG + chr4_3:10398598-10398617 None:intergenic 45.0%
CGGTGAACTTTCTTGCGAAA+GGG + chr4_3:10398661-10398680 None:intergenic 45.0%
CCTTTCGCAAGAAAGTTCAC+CGG - chr4_3:10398659-10398678 Msa0629540:intron 45.0%
! TTTTACGGACAATGTCGAGG+CGG + chr4_3:10398778-10398797 None:intergenic 45.0%
CTTGCCAGAAGATCGACATA+GGG + chr4_3:10398826-10398845 None:intergenic 45.0%
ACTTGCCAGAAGATCGACAT+AGG + chr4_3:10398827-10398846 None:intergenic 45.0%
GCACCTACGAGGAAATATTG+TGG + chr4_3:10398851-10398870 None:intergenic 45.0%
CAAGGAATGGAAGTCTTGGT+TGG - chr4_3:10399026-10399045 Msa0629540:CDS 45.0%
! ACTCATTGCTTCCTTGGTGT+TGG - chr4_3:10397662-10397681 Msa0629540:CDS 45.0%
!! TTGCTTCCTTGGTGTTGGTT+TGG - chr4_3:10397667-10397686 Msa0629540:CDS 45.0%
CTGTATCCAAACCAACACCA+AGG + chr4_3:10397676-10397695 None:intergenic 45.0%
GGATACAGATGAATGTCGGA+TGG - chr4_3:10397688-10397707 Msa0629540:CDS 45.0%
CCATCTTCTATGCCTGACAA+AGG + chr4_3:10397841-10397860 None:intergenic 45.0%
CCTTTGTCAGGCATAGAAGA+TGG - chr4_3:10397838-10397857 Msa0629540:CDS 45.0%
! GATGGAAGCTGTTGATGGAT+TGG - chr4_3:10397856-10397875 Msa0629540:CDS 45.0%
TCGTTCATTTACTCCCCGTT+TGG - chr4_3:10398459-10398478 Msa0629540:intron 45.0%
CGTTCATTTACTCCCCGTTT+GGG - chr4_3:10398460-10398479 Msa0629540:intron 45.0%
ATATCAGTGATGCCCAAACG+GGG + chr4_3:10398475-10398494 None:intergenic 45.0%
GATATCAGTGATGCCCAAAC+GGG + chr4_3:10398476-10398495 None:intergenic 45.0%
GGATATCAGTGATGCCCAAA+CGG + chr4_3:10398477-10398496 None:intergenic 45.0%
!! TAGAGTGTCGAAAAGGGAGA+GGG + chr4_3:10398597-10398616 None:intergenic 45.0%
!! TTAGAGTGTCGAAAAGGGAG+AGG + chr4_3:10398598-10398617 None:intergenic 45.0%
CGGTGAACTTTCTTGCGAAA+GGG + chr4_3:10398661-10398680 None:intergenic 45.0%
CCTTTCGCAAGAAAGTTCAC+CGG - chr4_3:10398659-10398678 Msa0629540:intron 45.0%
! TTTTACGGACAATGTCGAGG+CGG + chr4_3:10398778-10398797 None:intergenic 45.0%
CTTGCCAGAAGATCGACATA+GGG + chr4_3:10398826-10398845 None:intergenic 45.0%
ACTTGCCAGAAGATCGACAT+AGG + chr4_3:10398827-10398846 None:intergenic 45.0%
GCACCTACGAGGAAATATTG+TGG + chr4_3:10398851-10398870 None:intergenic 45.0%
CAAGGAATGGAAGTCTTGGT+TGG - chr4_3:10399026-10399045 Msa0629540:CDS 45.0%
TGGTGCACTCATTGCTTCCT+TGG - chr4_3:10397656-10397675 Msa0629540:CDS 50.0%
AGATGAATGTCGGATGGGGA+TGG - chr4_3:10397694-10397713 Msa0629540:CDS 50.0%
GATGAATGTCGGATGGGGAT+GGG - chr4_3:10397695-10397714 Msa0629540:CDS 50.0%
ATGAATGTCGGATGGGGATG+GGG - chr4_3:10397696-10397715 Msa0629540:CDS 50.0%
GCGATAACCATTGCAACTCC+AGG + chr4_3:10397732-10397751 None:intergenic 50.0%
CAGTAGAGACAGAATCCGAC+CGG - chr4_3:10398372-10398391 Msa0629540:intron 50.0%
TTGCGAAAGGGACGATGTGA+CGG + chr4_3:10398649-10398668 None:intergenic 50.0%
CCGGTGAACTTTCTTGCGAA+AGG + chr4_3:10398662-10398681 None:intergenic 50.0%
AAGTTCACCGGCCATGAACA+CGG - chr4_3:10398671-10398690 Msa0629540:intron 50.0%
TGTGAATCCGTGTTCATGGC+CGG + chr4_3:10398681-10398700 None:intergenic 50.0%
GCTGTGTGAATCCGTGTTCA+TGG + chr4_3:10398685-10398704 None:intergenic 50.0%
TCATTTCCATGATCGTGGCC+AGG - chr4_3:10398738-10398757 Msa0629540:intron 50.0%
TAGAATCCTGGCCACGATCA+TGG + chr4_3:10398747-10398766 None:intergenic 50.0%
!! GCGGATGACTTCTAGAATCC+TGG + chr4_3:10398759-10398778 None:intergenic 50.0%
CCAGAAGATCGACATAGGGA+TGG + chr4_3:10398822-10398841 None:intergenic 50.0%
CCATCCCTATGTCGATCTTC+TGG - chr4_3:10398819-10398838 Msa0629540:intron 50.0%
! ATATTTCCTCGTAGGTGCCG+CGG - chr4_3:10398853-10398872 Msa0629540:intron 50.0%
TGGTGCACTCATTGCTTCCT+TGG - chr4_3:10397656-10397675 Msa0629540:CDS 50.0%
AGATGAATGTCGGATGGGGA+TGG - chr4_3:10397694-10397713 Msa0629540:CDS 50.0%
GATGAATGTCGGATGGGGAT+GGG - chr4_3:10397695-10397714 Msa0629540:CDS 50.0%
ATGAATGTCGGATGGGGATG+GGG - chr4_3:10397696-10397715 Msa0629540:CDS 50.0%
GCGATAACCATTGCAACTCC+AGG + chr4_3:10397732-10397751 None:intergenic 50.0%
CAGTAGAGACAGAATCCGAC+CGG - chr4_3:10398372-10398391 Msa0629540:intron 50.0%
TTGCGAAAGGGACGATGTGA+CGG + chr4_3:10398649-10398668 None:intergenic 50.0%
CCGGTGAACTTTCTTGCGAA+AGG + chr4_3:10398662-10398681 None:intergenic 50.0%
AAGTTCACCGGCCATGAACA+CGG - chr4_3:10398671-10398690 Msa0629540:intron 50.0%
TGTGAATCCGTGTTCATGGC+CGG + chr4_3:10398681-10398700 None:intergenic 50.0%
GCTGTGTGAATCCGTGTTCA+TGG + chr4_3:10398685-10398704 None:intergenic 50.0%
TCATTTCCATGATCGTGGCC+AGG - chr4_3:10398738-10398757 Msa0629540:intron 50.0%
TAGAATCCTGGCCACGATCA+TGG + chr4_3:10398747-10398766 None:intergenic 50.0%
!! GCGGATGACTTCTAGAATCC+TGG + chr4_3:10398759-10398778 None:intergenic 50.0%
CCAGAAGATCGACATAGGGA+TGG + chr4_3:10398822-10398841 None:intergenic 50.0%
CCATCCCTATGTCGATCTTC+TGG - chr4_3:10398819-10398838 Msa0629540:intron 50.0%
! ATATTTCCTCGTAGGTGCCG+CGG - chr4_3:10398853-10398872 Msa0629540:intron 50.0%
! TGGAGTGCCTGGAGTTGCAA+TGG - chr4_3:10397722-10397741 Msa0629540:CDS 55.0%
GTGCAGAGCCTCCATGGATT+TGG + chr4_3:10398410-10398429 None:intergenic 55.0%
GTTACTGTGCAGAGCCTCCA+TGG + chr4_3:10398416-10398435 None:intergenic 55.0%
AAAAGGGAGAGGGAGGCTGA+TGG + chr4_3:10398587-10398606 None:intergenic 55.0%
! AGTGTCGAAAAGGGAGAGGG+AGG + chr4_3:10398594-10398613 None:intergenic 55.0%
AAGTGTCATCTTCTGGGCCC+CGG - chr4_3:10398616-10398635 Msa0629540:intron 55.0%
ACGATGTGACGGTCCTAGAC+CGG + chr4_3:10398638-10398657 None:intergenic 55.0%
! TGGAGTGCCTGGAGTTGCAA+TGG - chr4_3:10397722-10397741 Msa0629540:CDS 55.0%
GTGCAGAGCCTCCATGGATT+TGG + chr4_3:10398410-10398429 None:intergenic 55.0%
GTTACTGTGCAGAGCCTCCA+TGG + chr4_3:10398416-10398435 None:intergenic 55.0%
AAAAGGGAGAGGGAGGCTGA+TGG + chr4_3:10398587-10398606 None:intergenic 55.0%
! AGTGTCGAAAAGGGAGAGGG+AGG + chr4_3:10398594-10398613 None:intergenic 55.0%
AAGTGTCATCTTCTGGGCCC+CGG - chr4_3:10398616-10398635 Msa0629540:intron 55.0%
ACGATGTGACGGTCCTAGAC+CGG + chr4_3:10398638-10398657 None:intergenic 55.0%
! GTCGGATGGGGATGGGGTTT+TGG - chr4_3:10397702-10397721 Msa0629540:CDS 60.0%
!!! GGATGGGGTTTTGGAGTGCC+TGG - chr4_3:10397711-10397730 Msa0629540:CDS 60.0%
GATGTGACGGTCCTAGACCG+GGG + chr4_3:10398636-10398655 None:intergenic 60.0%
CGATGTGACGGTCCTAGACC+GGG + chr4_3:10398637-10398656 None:intergenic 60.0%
AAACTTCCGCGGCACCTACG+AGG + chr4_3:10398862-10398881 None:intergenic 60.0%
! GTCGGATGGGGATGGGGTTT+TGG - chr4_3:10397702-10397721 Msa0629540:CDS 60.0%
!!! GGATGGGGTTTTGGAGTGCC+TGG - chr4_3:10397711-10397730 Msa0629540:CDS 60.0%
GATGTGACGGTCCTAGACCG+GGG + chr4_3:10398636-10398655 None:intergenic 60.0%
CGATGTGACGGTCCTAGACC+GGG + chr4_3:10398637-10398656 None:intergenic 60.0%
AAACTTCCGCGGCACCTACG+AGG + chr4_3:10398862-10398881 None:intergenic 60.0%
CATCTTCTGGGCCCCGGTCT+AGG - chr4_3:10398622-10398641 Msa0629540:intron 65.0%
CATCTTCTGGGCCCCGGTCT+AGG - chr4_3:10398622-10398641 Msa0629540:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 10397516 10399180 10397516 ID=Msa0629540;Name=Msa0629540
chr4_3 mRNA 10397516 10399180 10397516 ID=Msa0629540-mRNA-1;Parent=Msa0629540;Name=Msa0629540-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0|0|1|0|0|3|0|329
chr4_3 exon 10398979 10399180 10398979 ID=Msa0629540-mRNA-1:exon:3233;Parent=Msa0629540-mRNA-1
chr4_3 exon 10398077 10398324 10398077 ID=Msa0629540-mRNA-1:exon:3232;Parent=Msa0629540-mRNA-1
chr4_3 exon 10397516 10398052 10397516 ID=Msa0629540-mRNA-1:exon:3231;Parent=Msa0629540-mRNA-1
chr4_3 CDS 10398979 10399180 10398979 ID=Msa0629540-mRNA-1:cds;Parent=Msa0629540-mRNA-1
chr4_3 CDS 10398077 10398324 10398077 ID=Msa0629540-mRNA-1:cds;Parent=Msa0629540-mRNA-1
chr4_3 CDS 10397516 10398052 10397516 ID=Msa0629540-mRNA-1:cds;Parent=Msa0629540-mRNA-1
Gene Sequence

>Msa0629540

CTCTATTTGATTGCGCTTGGAACCGGCAGTATCAAACCGTATGTTTCATCTTTTAGTGCTGACCAATTTGAAGAAAACAATGAGATTGAGAGGAAAAAGAAAAGCTCTTTTTTCAACTGGTTTTACTTCTCAATTAATATTGGTGCACTCATTGCTTCCTTGGTGTTGGTTTGGATACAGATGAATGTCGGATGGGGATGGGCAGTAGAGACAGAATCCGACCGGATAAAAGATTTACCAAATCCATGGAGGCTCTGCACAGTAACACAAGTCGAAGAACTCAAATCAATCGTTCATTTACTCCCCGTTTGGGCATCACTGATATCCTTTGCAACAGTATACAGTCAAATGGGAACCATGTTTGTGTTACAAGGCAACACAATGGATCAACACATTGGTCCTAAATTCAAAATTCCATCAGCCTCCCTCTCCCTTTTCGACACTCTAAGTGACCGTCACATCGTCCCTTTCGCAAGAAAGTTCACCGGCCATGAACACGGATTCACACAGCTTCAAAGAATCGGAATCGGCCTAGTCATCTCAATCATTTCCATGATCGTGGCCAGGATTCTAGAAGTCATCCGCCTCGACATTGTCCGTAAAAACAACTACTATGATCTTGAAACCATCCCTATGTCGATCTTCTGGCAAGTACCACAATATTTCCTCGTAGGTGCCGCGGAAGTTTTCACTAATATCGGTCAGATGGAGTTCTTTTATGGTCAGGCACCTGATGCTATGAGAAGTTTGTGTGCTGCACTTTCACTCACAACTAATGCATTGGGAAATTATGTGAGTACATTGCTTGTTACTATTGTCACAAAAGTTACTACAAGGAATGGAAGTCTTGGTTGGATTCCAGATAATATGAATAGGGGTCACCTTGATTACTTCTACTGGCTTTTGACAATTCTTAGTTTGATCAACTTCATTGTGTATCTATTGATTGCTAATAGGTATACATACAAAAAAGTGACTCATCTTAGG
Protein sequence

>Msa0629540

LYLIALGTGSIKPYVSSFSADQFEENNEIERKKKSSFFNWFYFSINIGALIASLVLVWIQMNVGWGWAVETESDRIKDLPNPWRLCTVTQVEELKSIVHLLPVWASLISFATVYSQMGTMFVLQGNTMDQHIGPKFKIPSASLSLFDTLSDRHIVPFARKFTGHEHGFTQLQRIGIGLVISIISMIVARILEVIRLDIVRKNNYYDLETIPMSIFWQVPQYFLVGAAEVFTNIGQMEFFYGQAPDAMRSLCAALSLTTNALGNYVSTLLVTIVTKVTTRNGSLGWIPDNMNRGHLDYFYWLLTILSLINFIVYLLIANRYTYKKVTHLR