AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0631180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0631180 MtrunA17_Chr4g0008551 97.151 351 8 2 1 350 1 350 0.0 694
Msa0631180 MtrunA17_Chr3g0133601 73.148 108 28 1 37 143 35 142 3.60e-53 175
Msa0631180 MtrunA17_Chr4g0053431 70.874 103 30 0 37 139 3 105 2.83e-49 166
Msa0631180 MtrunA17_Chr5g0437321 69.159 107 33 0 30 136 10 116 1.99e-47 162
Msa0631180 MtrunA17_Chr5g0401731 68.932 103 32 0 37 139 13 115 3.05e-47 162
Msa0631180 MtrunA17_Chr6g0454921 66.019 103 35 0 37 139 13 115 2.22e-45 154
Msa0631180 MtrunA17_Chr3g0125801 62.376 101 38 0 39 139 16 116 1.36e-39 141
Msa0631180 MtrunA17_Chr5g0417621 55.357 112 50 0 28 139 123 234 2.13e-39 144
Msa0631180 MtrunA17_Chr4g0042501 50.806 124 61 0 16 139 82 205 4.13e-39 143
Msa0631180 MtrunA17_Chr6g0480581 57.000 100 43 0 39 138 4 103 1.10e-38 137
Msa0631180 MtrunA17_Chr6g0460671 52.778 108 51 0 32 139 92 199 3.13e-38 139
Msa0631180 MtrunA17_Chr7g0254261 58.416 101 42 0 39 139 89 189 8.21e-37 135
Msa0631180 MtrunA17_Chr4g0058991 58.824 102 42 0 38 139 208 309 1.78e-36 137
Msa0631180 MtrunA17_Chr7g0238631 56.863 102 44 0 38 139 112 213 1.09e-35 136
Msa0631180 MtrunA17_Chr1g0157731 44.805 154 81 3 38 189 90 241 1.76e-35 137
Msa0631180 MtrunA17_Chr6g0460661 48.649 111 57 0 29 139 6 116 2.95e-35 126
Msa0631180 MtrunA17_Chr5g0429661 53.398 103 48 0 38 140 121 223 1.17e-34 130
Msa0631180 MtrunA17_Chr7g0228531 56.863 102 43 1 38 139 219 319 4.13e-34 130
Msa0631180 MtrunA17_Chr3g0139671 50.980 102 50 0 38 139 84 185 1.03e-33 132
Msa0631180 MtrunA17_Chr5g0417821 55.769 104 45 1 39 141 9 112 2.96e-33 124
Msa0631180 MtrunA17_Chr3g0117511 53.922 102 47 0 38 139 182 283 6.78e-33 127
Msa0631180 MtrunA17_Chr1g0167661 41.463 164 91 3 39 197 14 177 9.53e-32 120
Msa0631180 MtrunA17_Chr3g0103281 42.254 142 77 2 39 175 14 155 1.25e-31 121
Msa0631180 MtrunA17_Chr5g0410961 52.941 102 47 1 39 139 14 115 3.28e-31 120
Msa0631180 MtrunA17_Chr4g0039971 51.261 119 50 4 34 146 11 127 5.35e-31 120
Msa0631180 MtrunA17_Chr4g0022911 38.365 159 73 3 39 195 15 150 5.58e-31 119
Msa0631180 MtrunA17_Chr7g0228481 56.000 100 43 1 38 137 219 317 7.11e-31 121
Msa0631180 MtrunA17_Chr3g0099131 49.565 115 52 2 39 147 43 157 1.98e-30 121
Msa0631180 MtrunA17_Chr5g0395281 50.000 114 50 3 39 146 14 126 2.12e-30 117
Msa0631180 MtrunA17_Chr1g0193801 42.857 154 81 3 39 187 14 165 2.62e-30 119
Msa0631180 MtrunA17_Chr5g0397841 40.690 145 73 1 2 133 60 204 3.20e-30 120
Msa0631180 MtrunA17_Chr4g0060721 52.941 102 47 1 39 139 15 116 4.71e-30 117
Msa0631180 MtrunA17_Chr4g0030881 46.154 117 53 2 39 146 9 124 7.07e-30 115
Msa0631180 MtrunA17_Chr2g0281071 48.760 121 56 3 31 146 8 127 9.71e-30 116
Msa0631180 MtrunA17_Chr4g0048511 47.541 122 58 3 31 147 8 128 1.30e-29 116
Msa0631180 MtrunA17_Chr8g0349261 50.943 106 48 3 39 141 15 119 2.61e-29 114
Msa0631180 MtrunA17_Chr4g0022901 48.148 108 53 2 39 144 15 121 3.07e-29 113
Msa0631180 MtrunA17_Chr2g0327821 41.958 143 73 3 39 172 8 149 3.46e-29 112
Msa0631180 MtrunA17_Chr2g0309911 49.138 116 55 3 29 141 2 116 4.24e-29 114
Msa0631180 MtrunA17_Chr3g0115821 51.429 105 48 2 39 141 14 117 4.53e-29 115
Msa0631180 MtrunA17_Chr7g0217221 42.657 143 65 4 39 176 14 144 5.35e-29 113
Msa0631180 MtrunA17_Chr1g0180391 51.402 107 49 2 35 139 17 122 6.35e-29 111
Msa0631180 MtrunA17_Chr3g0088461 50.862 116 55 2 26 139 10 125 8.68e-29 114
Msa0631180 MtrunA17_Chr4g0022931 38.994 159 69 5 39 195 15 147 9.43e-29 112
Msa0631180 MtrunA17_Chr2g0323411 48.673 113 53 2 39 146 14 126 1.13e-28 113
Msa0631180 MtrunA17_Chr1g0152011 40.845 142 81 3 39 178 14 154 1.30e-28 113
Msa0631180 MtrunA17_Chr3g0092401 50.000 102 50 1 39 139 15 116 1.49e-28 112
Msa0631180 MtrunA17_Chr1g0203411 50.000 102 50 1 39 139 14 115 1.89e-28 112
Msa0631180 MtrunA17_Chr1g0193371 42.667 150 67 4 39 174 14 158 2.01e-28 113
Msa0631180 MtrunA17_Chr8g0334881 51.961 102 47 2 39 138 12 113 2.79e-28 112
Msa0631180 MtrunA17_Chr6g0453211 51.546 97 46 1 39 134 14 110 3.16e-28 112
Msa0631180 MtrunA17_Chr5g0400821 41.216 148 82 3 39 184 14 158 3.19e-28 112
Msa0631180 MtrunA17_Chr1g0151941 45.833 120 56 3 39 149 14 133 3.31e-28 110
Msa0631180 MtrunA17_Chr1g0167691 50.000 102 50 1 39 139 14 115 3.68e-28 110
Msa0631180 MtrunA17_Chr4g0013361 48.182 110 55 2 31 138 4 113 4.11e-28 111
Msa0631180 MtrunA17_Chr8g0385321 48.718 117 55 2 39 150 14 130 4.73e-28 111
Msa0631180 MtrunA17_Chr7g0270891 49.123 114 51 3 39 146 14 126 4.91e-28 112
Msa0631180 MtrunA17_Chr7g0274581 41.985 131 69 2 39 168 14 138 5.30e-28 108
Msa0631180 MtrunA17_Chr4g0058631 50.485 103 48 2 39 139 14 115 5.72e-28 112
Msa0631180 MtrunA17_Chr1g0211161 50.485 103 48 2 39 139 15 116 7.05e-28 108
Msa0631180 MtrunA17_Chr2g0328771 50.980 102 49 1 39 139 22 123 7.56e-28 110
Msa0631180 MtrunA17_Chr3g0117091 45.113 133 69 3 39 168 14 145 8.60e-28 111
Msa0631180 MtrunA17_Chr7g0254411 51.456 103 47 2 39 139 14 115 8.72e-28 111
Msa0631180 MtrunA17_Chr8g0346561 50.000 102 50 1 39 139 14 115 9.73e-28 110
Msa0631180 MtrunA17_Chr1g0187761 49.515 103 49 2 39 139 14 115 9.92e-28 109
Msa0631180 MtrunA17_Chr8g0354661 49.533 107 53 1 39 144 39 145 1.72e-27 113
Msa0631180 MtrunA17_Chr4g0042671 47.788 113 54 2 39 146 14 126 2.33e-27 111
Msa0631180 MtrunA17_Chr8g0342541 50.943 106 48 3 37 139 11 115 2.34e-27 110
Msa0631180 MtrunA17_Chr3g0080861 49.074 108 52 2 39 144 39 145 2.53e-27 112
Msa0631180 MtrunA17_Chr2g0323351 39.041 146 83 3 39 179 14 158 2.63e-27 107
Msa0631180 MtrunA17_Chr2g0322521 51.852 108 49 2 39 144 31 137 2.93e-27 110
Msa0631180 MtrunA17_Chr7g0275911 49.020 102 51 1 39 139 14 115 3.09e-27 107
Msa0631180 MtrunA17_Chr6g0453471 47.788 113 54 2 39 146 14 126 3.10e-27 110
Msa0631180 MtrunA17_Chr4g0028311 50.485 103 49 2 39 139 14 116 3.21e-27 109
Msa0631180 MtrunA17_Chr3g0135311 49.057 106 52 2 39 142 14 119 3.25e-27 109
Msa0631180 MtrunA17_Chr1g0203441 47.368 114 57 2 39 150 15 127 3.60e-27 108
Msa0631180 MtrunA17_Chr4g0032401 48.214 112 56 2 30 139 9 120 4.54e-27 109
Msa0631180 MtrunA17_Chr7g0217741 43.165 139 72 3 39 170 14 152 5.33e-27 108
Msa0631180 MtrunA17_Chr1g0154031 50.962 104 48 2 39 140 78 180 5.72e-27 110
Msa0631180 MtrunA17_Chr8g0342521 51.887 106 47 3 37 139 11 115 6.82e-27 108
Msa0631180 MtrunA17_Chr2g0327351 54.082 98 43 2 39 134 14 111 7.68e-27 108
Msa0631180 MtrunA17_Chr4g0055981 40.426 141 76 4 3 140 24 159 8.32e-27 106
Msa0631180 MtrunA17_Chr7g0261281 49.020 102 51 1 39 139 14 115 8.56e-27 107
Msa0631180 MtrunA17_Chr1g0168661 46.610 118 58 3 27 140 9 125 1.09e-26 106
Msa0631180 MtrunA17_Chr1g0186061 44.915 118 55 3 31 139 7 123 1.14e-26 106
Msa0631180 MtrunA17_Chr5g0435101 46.552 116 60 2 39 152 13 128 1.32e-26 105
Msa0631180 MtrunA17_Chr5g0397231 53.000 100 45 2 37 134 11 110 1.74e-26 107
Msa0631180 MtrunA17_Chr6g0452271 39.286 140 80 2 39 173 14 153 2.01e-26 107
Msa0631180 MtrunA17_Chr1g0177901 51.685 89 43 0 49 137 4 92 2.36e-26 104
Msa0631180 MtrunA17_Chr7g0264641 47.573 103 52 2 39 139 14 116 2.61e-26 105
Msa0631180 MtrunA17_Chr4g0037141 47.788 113 54 2 39 146 14 126 2.89e-26 105
Msa0631180 MtrunA17_Chr4g0068061 52.941 102 47 1 39 139 14 115 2.93e-26 107
Msa0631180 MtrunA17_Chr8g0387421 48.571 105 52 2 37 139 11 115 3.13e-26 106
Msa0631180 MtrunA17_Chr7g0228401 53.409 88 41 0 50 137 290 377 3.39e-26 108
Msa0631180 MtrunA17_Chr2g0311221 52.941 102 44 3 36 134 12 112 3.94e-26 106
Msa0631180 MtrunA17_Chr5g0441131 39.873 158 87 5 39 192 11 164 3.95e-26 103
Msa0631180 MtrunA17_Chr2g0330041 49.057 106 50 3 37 139 11 115 4.29e-26 107
Msa0631180 MtrunA17_Chr6g0470971 48.571 105 51 2 39 141 16 119 4.91e-26 105
Msa0631180 MtrunA17_Chr7g0228231 47.525 101 52 1 39 138 16 116 8.46e-26 102
Msa0631180 MtrunA17_Chr1g0209661 42.718 103 58 1 39 140 29 131 1.18e-25 104
Msa0631180 MtrunA17_Chr7g0233061 43.269 104 57 1 34 137 175 276 1.42e-25 105
Msa0631180 MtrunA17_Chr7g0220341 39.850 133 76 3 21 150 10 141 1.55e-25 103
Msa0631180 MtrunA17_Chr8g0342481 47.664 107 52 3 39 142 14 119 1.65e-25 105
Msa0631180 MtrunA17_Chr4g0022881 48.598 107 51 3 34 138 10 114 2.00e-25 102
Msa0631180 MtrunA17_Chr6g0450101 46.789 109 56 2 39 146 16 123 2.21e-25 101
Msa0631180 MtrunA17_Chr6g0487491 47.899 119 51 4 36 143 10 128 2.31e-25 103
Msa0631180 MtrunA17_Chr4g0044421 44.915 118 61 3 37 151 12 128 2.34e-25 101
Msa0631180 MtrunA17_Chr7g0247131 59.740 77 29 1 65 139 5 81 3.33e-25 102
Msa0631180 MtrunA17_Chr8g0343831 47.059 102 53 1 39 139 10 111 3.51e-25 102
Msa0631180 MtrunA17_Chr5g0440781 47.059 102 52 2 39 138 14 115 3.89e-25 100
Msa0631180 MtrunA17_Chr4g0022891 48.515 101 49 2 39 137 14 113 5.75e-25 101
Msa0631180 MtrunA17_Chr3g0131121 47.059 102 53 1 39 139 14 115 5.95e-25 102
Msa0631180 MtrunA17_Chr7g0271241 41.379 145 78 3 39 177 14 157 7.86e-25 103
Msa0631180 MtrunA17_Chr7g0228891 34.320 169 103 4 39 200 14 181 8.03e-25 101
Msa0631180 MtrunA17_Chr4g0072751 52.041 98 45 2 39 134 14 111 8.56e-25 103
Msa0631180 MtrunA17_Chr1g0194301 48.077 104 51 2 39 140 35 137 1.02e-24 101
Msa0631180 MtrunA17_Chr3g0121241 47.115 104 54 1 39 141 44 147 1.24e-24 102
Msa0631180 MtrunA17_Chr4g0054391 50.515 97 46 2 39 133 14 110 1.70e-24 101
Msa0631180 MtrunA17_Chr4g0057031 43.478 115 58 3 39 147 14 127 1.79e-24 100
Msa0631180 MtrunA17_Chr1g0192411 46.957 115 59 2 32 144 6 120 1.84e-24 103
Msa0631180 MtrunA17_Chr5g0441141 47.059 102 52 2 39 138 14 115 1.97e-24 100
Msa0631180 MtrunA17_Chr5g0440761 47.059 102 52 2 39 138 14 115 2.01e-24 100
Msa0631180 MtrunA17_Chr3g0110351 44.737 114 56 3 39 146 14 126 3.92e-24 100
Msa0631180 MtrunA17_Chr5g0434831 42.308 104 59 1 39 141 9 112 9.16e-24 96.7
Msa0631180 MtrunA17_Chr5g0434911 41.346 104 60 1 39 141 23 126 1.02e-23 99.0
Msa0631180 MtrunA17_Chr5g0434931 41.346 104 60 1 39 141 37 140 1.23e-23 98.6
Msa0631180 MtrunA17_Chr1g0194951 49.020 102 51 1 39 139 14 115 1.31e-23 100
Msa0631180 MtrunA17_Chr4g0070611 42.857 112 62 2 39 149 14 124 1.46e-23 99.0
Msa0631180 MtrunA17_Chr4g0070641 42.857 112 62 2 39 149 14 124 1.47e-23 95.5
Msa0631180 MtrunA17_Chr7g0240821 43.103 116 60 4 42 154 6 118 1.72e-23 97.1
Msa0631180 MtrunA17_Chr5g0434571 43.860 114 57 3 39 146 50 162 1.78e-23 99.8
Msa0631180 MtrunA17_Chr5g0434841 43.269 104 58 1 39 141 22 125 1.91e-23 99.0
Msa0631180 MtrunA17_Chr1g0194291 44.954 109 58 2 27 134 12 119 2.23e-23 97.8
Msa0631180 MtrunA17_Chr7g0228991 41.346 104 60 1 39 141 31 134 9.63e-23 96.3
Msa0631180 MtrunA17_Chr8g0360111 40.000 105 62 1 33 136 21 125 1.94e-21 92.4
Msa0631180 MtrunA17_Chr3g0099141 49.398 83 41 1 39 120 42 124 6.03e-21 87.8
Msa0631180 MtrunA17_Chr2g0293911 43.689 103 57 1 39 140 26 128 1.18e-20 91.3
Msa0631180 MtrunA17_Chr4g0068921 43.564 101 56 1 39 138 26 126 2.35e-20 87.8
Msa0631180 MtrunA17_Chr8g0362231 34.328 134 85 2 28 159 9 141 7.44e-20 90.1
Msa0631180 MtrunA17_Chr7g0269831 47.458 118 56 2 39 150 14 131 1.27e-19 88.6
Msa0631180 MtrunA17_Chr7g0238651 40.196 102 58 1 34 132 2 103 2.81e-19 87.8
Msa0631180 MtrunA17_Chr5g0416341 36.364 99 63 0 42 140 29 127 1.01e-18 87.0
Msa0631180 MtrunA17_Chr3g0093811 46.835 79 38 1 72 146 18 96 2.50e-17 80.9
Msa0631180 MtrunA17_Chr5g0425591 44.444 81 43 2 39 117 11 91 4.36e-17 75.9
Msa0631180 MtrunA17_Chr4g0042611 46.667 75 39 1 39 112 14 88 7.68e-17 74.7
Msa0631180 MtrunA17_Chr5g0434901 49.254 67 34 0 71 137 8 74 8.46e-17 75.5
Msa0631180 MtrunA17_Chr7g0229131 42.353 85 48 1 71 155 7 90 1.12e-16 77.0
Msa0631180 MtrunA17_Chr5g0395221 48.780 82 40 2 32 112 8 88 1.43e-16 73.9
Msa0631180 MtrunA17_Chr7g0229101 49.254 67 34 0 71 137 7 73 1.58e-16 77.4
Msa0631180 MtrunA17_Chr6g0453751 44.000 100 43 6 29 117 13 110 2.80e-16 74.7
Msa0631180 MtrunA17_Chr7g0233151 63.043 46 17 0 94 139 6 51 2.91e-15 72.8
Msa0631180 MtrunA17_Chr2g0323321 39.785 93 53 2 39 129 13 104 3.91e-15 70.9
Msa0631180 MtrunA17_Chr8g0342511 44.000 75 39 2 39 111 14 87 4.36e-14 67.4
Msa0631180 MtrunA17_Chr8g0342471 46.154 78 38 3 39 113 14 90 5.24e-14 68.6
Msa0631180 MtrunA17_Chr8g0342531 44.156 77 40 2 39 113 14 89 6.69e-14 68.9
Msa0631180 MtrunA17_Chr3g0104501 40.860 93 43 2 6 90 96 184 7.24e-14 69.7
Msa0631180 MtrunA17_Chr8g0342461 44.872 78 39 3 39 113 14 90 1.20e-13 67.4
Msa0631180 MtrunA17_Chr3g0104491 48.077 52 27 0 89 140 17 68 4.48e-13 68.9
Msa0631180 MtrunA17_Chr7g0233161 49.153 59 30 0 36 94 296 354 1.11e-12 68.2
Msa0631180 MtrunA17_Chr6g0483051 40.426 94 55 1 39 132 120 212 2.19e-12 68.2
Msa0631180 MtrunA17_Chr6g0483051 33.663 101 66 1 36 136 66 165 5.84e-12 67.0
Msa0631180 MtrunA17_Chr4g0046181 41.667 72 37 1 38 109 220 286 2.40e-12 66.6
Msa0631180 MtrunA17_Chr2g0294811 39.759 83 49 1 39 120 14 96 2.42e-12 63.2
Msa0631180 MtrunA17_Chr5g0421201 55.556 45 20 0 94 138 15 59 1.68e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0631180 AT3G09230.1 50.151 331 150 6 26 348 43 366 7.45e-99 298
Msa0631180 AT3G55730.1 45.283 371 165 10 1 339 1 365 3.15e-92 281
Msa0631180 AT2G39880.1 42.638 326 160 10 13 334 24 326 3.13e-69 221
Msa0631180 AT5G67300.1 66.364 110 36 1 37 146 4 112 4.19e-48 164
Msa0631180 AT3G50060.1 67.593 108 35 0 37 144 4 111 1.84e-47 162
Msa0631180 AT4G37260.1 47.423 194 85 3 37 220 11 197 2.39e-47 163
Msa0631180 AT2G23290.1 62.602 123 45 1 37 159 11 132 3.17e-46 160
Msa0631180 AT1G17950.1 53.906 128 51 2 39 159 5 131 4.64e-42 147
Msa0631180 AT1G69560.1 54.545 110 50 0 30 139 98 207 1.86e-39 142
Msa0631180 AT5G17800.1 51.969 127 59 1 15 139 67 193 2.07e-39 142
Msa0631180 AT1G69560.2 54.545 110 50 0 30 139 114 223 2.41e-39 142
Msa0631180 AT4G33450.1 58.416 101 42 0 39 139 19 119 3.30e-39 139
Msa0631180 AT1G26780.1 57.426 101 43 0 39 139 98 198 3.35e-38 138
Msa0631180 AT1G73410.1 60.396 101 40 0 39 139 6 106 7.78e-38 136
Msa0631180 AT1G26780.2 57.426 101 43 0 39 139 98 198 1.02e-37 139
Msa0631180 AT1G73410.2 60.396 101 40 0 39 139 6 106 1.42e-37 134
Msa0631180 AT5G58850.1 52.336 107 51 0 33 139 99 205 3.73e-34 130
Msa0631180 AT3G29020.1 53.465 101 47 0 39 139 65 165 5.46e-34 125
Msa0631180 AT4G18770.1 51.376 109 53 0 31 139 209 317 7.04e-34 130
Msa0631180 AT3G29020.2 53.465 101 47 0 39 139 67 167 9.72e-34 127
Msa0631180 AT3G27785.1 54.286 105 48 0 35 139 185 289 1.26e-33 129
Msa0631180 AT3G09370.2 52.941 102 48 0 38 139 134 235 1.80e-33 130
Msa0631180 AT3G09370.1 52.941 102 48 0 38 139 129 230 1.89e-33 129
Msa0631180 AT5G02320.3 43.537 147 72 1 38 184 66 201 2.18e-33 129
Msa0631180 AT3G09370.3 52.941 102 48 0 38 139 142 243 2.54e-33 129
Msa0631180 AT5G02320.1 43.537 147 72 1 38 184 126 261 3.10e-33 129
Msa0631180 AT5G02320.2 43.537 147 72 1 38 184 126 261 3.10e-33 129
Msa0631180 AT5G11510.3 47.059 102 54 0 38 139 80 181 9.29e-33 129
Msa0631180 AT5G11510.1 47.059 102 54 0 38 139 80 181 9.29e-33 129
Msa0631180 AT5G11510.4 47.059 102 54 0 38 139 80 181 9.29e-33 129
Msa0631180 AT5G11510.5 47.059 102 54 0 38 139 80 181 1.17e-32 129
Msa0631180 AT5G11510.2 47.059 102 54 0 38 139 80 181 1.26e-32 129
Msa0631180 AT5G11050.1 50.485 103 51 0 38 140 104 206 2.65e-32 125
Msa0631180 AT5G40360.1 51.000 100 49 0 39 138 158 257 3.09e-32 124
Msa0631180 AT3G53200.1 54.369 103 44 2 39 139 11 112 7.20e-32 120
Msa0631180 AT4G32730.5 49.020 102 52 0 38 139 86 187 2.08e-31 125
Msa0631180 AT4G32730.4 49.020 102 52 0 38 139 86 187 2.08e-31 125
Msa0631180 AT4G32730.3 49.020 102 52 0 38 139 86 187 2.08e-31 125
Msa0631180 AT4G32730.2 49.020 102 52 0 38 139 86 187 2.08e-31 125
Msa0631180 AT4G32730.1 49.020 102 52 0 38 139 86 187 2.38e-31 125
Msa0631180 AT1G18570.1 51.327 113 50 2 39 146 15 127 4.59e-31 120
Msa0631180 AT5G14750.1 42.759 145 79 3 29 172 9 150 6.60e-31 116
Msa0631180 AT5G59780.3 50.000 104 49 2 39 140 10 112 7.05e-31 117
Msa0631180 AT3G46130.1 50.962 104 48 2 39 140 11 113 1.28e-30 117
Msa0631180 AT2G32460.1 48.855 131 59 4 16 144 2 126 1.64e-30 121
Msa0631180 AT3G61250.1 52.427 103 46 2 39 139 14 115 1.74e-30 118
Msa0631180 AT4G05100.1 49.587 121 55 3 31 146 8 127 1.87e-30 118
Msa0631180 AT3G11440.2 50.467 107 52 1 39 144 43 149 5.42e-30 119
Msa0631180 AT2G32460.2 51.852 108 49 2 39 144 8 114 7.90e-30 119
Msa0631180 AT5G39700.1 41.129 124 72 1 16 138 32 155 1.14e-29 112
Msa0631180 AT4G26930.1 46.610 118 62 1 28 144 10 127 1.45e-29 117
Msa0631180 AT3G11440.3 50.467 107 52 1 39 144 43 149 1.83e-29 119
Msa0631180 AT3G11440.4 50.467 107 52 1 39 144 43 149 1.83e-29 119
Msa0631180 AT3G11440.1 50.467 107 52 1 39 144 43 149 1.83e-29 119
Msa0631180 AT5G62470.1 47.107 121 59 2 39 155 14 133 1.91e-29 116
Msa0631180 AT4G28110.1 49.558 113 52 2 39 146 14 126 2.01e-29 114
Msa0631180 AT3G48920.1 47.788 113 57 2 39 150 20 131 3.41e-29 113
Msa0631180 AT3G30210.1 43.704 135 72 3 39 170 29 162 4.21e-29 114
Msa0631180 AT4G01680.3 50.000 114 50 3 39 146 14 126 4.42e-29 112
Msa0631180 AT1G79180.1 53.774 106 47 2 36 139 12 117 4.48e-29 114
Msa0631180 AT3G23250.1 50.980 102 49 1 39 139 14 115 5.35e-29 114
Msa0631180 AT5G06100.1 50.467 107 52 1 39 144 34 140 5.35e-29 116
Msa0631180 AT4G01680.1 50.000 114 50 3 39 146 14 126 8.77e-29 114
Msa0631180 AT5G56110.1 47.788 113 54 2 39 146 14 126 8.96e-29 114
Msa0631180 AT5G06100.5 50.467 107 52 1 39 144 34 140 1.33e-28 116
Msa0631180 AT5G06100.2 50.467 107 52 1 39 144 34 140 1.33e-28 116
Msa0631180 AT5G06100.3 50.467 107 52 1 39 144 34 140 1.33e-28 116
Msa0631180 AT5G06100.4 50.467 107 52 1 39 144 34 140 1.33e-28 116
Msa0631180 AT3G01140.2 48.780 123 56 3 39 154 14 136 1.37e-28 114
Msa0631180 AT5G26660.1 43.421 152 71 5 39 181 14 159 2.06e-28 113
Msa0631180 AT4G17785.2 50.000 114 52 2 39 147 15 128 2.22e-28 113
Msa0631180 AT5G60890.1 49.558 113 52 2 39 146 14 126 2.33e-28 112
Msa0631180 AT1G74430.1 49.138 116 54 2 39 149 14 129 2.34e-28 111
Msa0631180 AT1G74650.1 50.962 104 50 1 39 141 14 117 2.47e-28 112
Msa0631180 AT4G17785.1 50.000 114 52 2 39 147 15 128 2.89e-28 113
Msa0631180 AT3G01140.1 48.780 123 56 3 39 154 57 179 3.04e-28 114
Msa0631180 AT3G12720.1 50.485 103 48 2 39 139 24 125 3.06e-28 112
Msa0631180 AT5G15310.4 43.571 140 71 3 39 170 14 153 3.18e-28 110
Msa0631180 AT3G02940.2 47.788 113 54 2 39 146 14 126 3.89e-28 112
Msa0631180 AT5G15310.1 43.571 140 71 3 39 170 14 153 4.02e-28 112
Msa0631180 AT2G26950.1 47.748 111 48 3 38 142 17 123 4.09e-28 113
Msa0631180 AT5G55020.1 51.485 101 48 1 39 138 28 128 4.44e-28 115
Msa0631180 AT5G15310.2 43.571 140 71 3 39 170 14 153 4.53e-28 112
Msa0631180 AT5G57620.1 49.057 106 52 2 39 142 14 119 4.54e-28 112
Msa0631180 AT3G02940.1 47.788 113 54 2 39 146 14 126 5.20e-28 112
Msa0631180 AT3G02940.3 47.788 113 54 2 39 146 14 126 5.20e-28 112
Msa0631180 AT5G65230.1 50.476 105 49 2 39 141 14 117 5.44e-28 111
Msa0631180 AT4G21440.1 48.673 113 53 2 39 146 14 126 5.49e-28 112
Msa0631180 AT3G28910.1 49.057 106 53 1 35 139 10 115 6.03e-28 111
Msa0631180 AT5G62470.2 41.060 151 83 3 39 184 14 163 6.93e-28 112
Msa0631180 AT5G40330.1 45.614 114 60 2 31 142 6 119 7.19e-28 108
Msa0631180 AT4G00540.2 50.000 104 49 1 39 139 103 206 8.28e-28 112
Msa0631180 AT2G47190.1 51.923 104 47 2 39 140 22 124 9.16e-28 110
Msa0631180 AT3G08500.1 46.212 132 66 2 9 139 6 133 1.21e-27 111
Msa0631180 AT1G56160.1 50.467 107 49 3 36 139 12 117 1.24e-27 110
Msa0631180 AT5G16770.4 47.788 113 54 2 39 146 14 126 1.34e-27 110
Msa0631180 AT5G16770.3 47.788 113 54 2 39 146 14 126 1.34e-27 110
Msa0631180 AT3G47600.1 50.000 102 50 1 39 139 14 115 1.47e-27 110
Msa0631180 AT1G08810.1 41.958 143 75 3 39 174 14 155 1.64e-27 109
Msa0631180 AT4G37780.1 52.427 103 47 2 39 139 14 116 1.81e-27 110
Msa0631180 AT5G16770.1 47.788 113 54 2 39 146 14 126 1.91e-27 110
Msa0631180 AT5G16770.2 47.788 113 54 2 39 146 14 126 1.91e-27 110
Msa0631180 AT4G00540.1 50.000 104 49 1 39 139 101 204 1.94e-27 112
Msa0631180 AT2G31180.1 49.020 102 51 1 39 139 14 115 2.48e-27 108
Msa0631180 AT5G23000.1 51.402 107 49 3 36 139 10 116 2.58e-27 110
Msa0631180 AT5G61420.2 48.673 113 53 2 39 146 14 126 2.90e-27 110
Msa0631180 AT1G57560.1 48.246 114 52 3 39 146 14 126 3.65e-27 109
Msa0631180 AT5G07690.1 47.788 113 54 2 39 146 14 126 3.69e-27 109
Msa0631180 AT1G57560.2 48.246 114 52 3 39 146 14 126 3.69e-27 108
Msa0631180 AT1G22640.1 49.020 102 51 1 39 139 14 115 4.06e-27 108
Msa0631180 AT5G12870.1 50.980 102 49 1 39 139 20 121 4.34e-27 108
Msa0631180 AT4G01680.2 45.238 126 50 3 39 146 14 138 4.65e-27 109
Msa0631180 AT5G10280.1 47.619 105 52 2 39 141 14 117 4.74e-27 109
Msa0631180 AT1G06180.1 51.456 103 47 2 39 139 14 115 4.77e-27 107
Msa0631180 AT3G27920.1 45.714 105 56 1 39 142 16 120 4.99e-27 107
Msa0631180 AT1G34670.1 42.446 139 75 2 39 172 14 152 5.59e-27 110
Msa0631180 AT3G01530.1 49.057 106 51 2 35 138 23 127 5.89e-27 106
Msa0631180 AT5G54230.1 46.903 113 55 2 39 146 14 126 7.10e-27 108
Msa0631180 AT1G35515.1 49.020 102 51 1 39 139 14 115 7.71e-27 105
Msa0631180 AT1G74080.1 47.788 113 54 2 39 146 14 126 7.72e-27 108
Msa0631180 AT2G26960.1 32.301 226 123 5 36 247 19 228 1.05e-26 110
Msa0631180 AT5G07700.1 47.788 113 54 2 39 146 14 126 1.12e-26 108
Msa0631180 AT5G07700.2 47.788 113 54 2 39 146 14 126 1.12e-26 108
Msa0631180 AT1G18710.1 46.491 114 56 2 39 147 14 127 1.39e-26 106
Msa0631180 AT4G09460.1 50.980 102 49 1 39 139 14 115 1.62e-26 105
Msa0631180 AT4G38620.1 47.788 113 54 2 39 146 14 126 1.65e-26 107
Msa0631180 AT1G63910.1 48.039 102 52 1 39 139 14 115 1.79e-26 108
Msa0631180 AT2G25230.1 45.545 101 53 2 39 138 26 125 1.79e-26 105
Msa0631180 AT1G25340.1 43.363 113 61 2 30 140 11 122 2.43e-26 106
Msa0631180 AT3G13540.1 50.000 102 50 1 39 139 25 126 2.45e-26 105
Msa0631180 AT1G09540.1 50.000 114 50 3 39 146 14 126 3.72e-26 107
Msa0631180 AT4G25560.1 47.619 105 52 2 39 141 12 115 3.83e-26 105
Msa0631180 AT1G25340.2 42.342 111 60 1 30 140 11 117 3.89e-26 105
Msa0631180 AT3G60460.1 49.020 102 50 2 39 138 13 114 4.21e-26 106
Msa0631180 AT3G13890.2 48.571 105 52 2 37 139 11 115 4.81e-26 107
Msa0631180 AT5G52600.1 47.748 111 54 3 31 139 7 115 4.90e-26 103
Msa0631180 AT1G25340.3 41.964 112 61 1 29 140 10 117 6.85e-26 105
Msa0631180 AT3G24310.1 49.515 103 49 2 39 139 20 121 1.28e-25 104
Msa0631180 AT2G16720.1 48.039 102 52 1 39 139 14 115 1.53e-25 103
Msa0631180 AT3G49690.1 48.571 105 52 2 39 141 14 118 1.85e-25 104
Msa0631180 AT3G28470.1 46.903 113 55 2 39 146 14 126 2.04e-25 104
Msa0631180 AT3G27810.1 48.515 101 51 1 39 138 22 122 2.14e-25 102
Msa0631180 AT1G16490.1 50.943 106 50 2 36 139 12 117 2.56e-25 103
Msa0631180 AT3G13890.1 46.491 114 50 3 37 139 11 124 3.15e-25 105
Msa0631180 AT5G65790.1 49.515 103 50 2 39 139 14 116 3.25e-25 105
Msa0631180 AT5G52260.1 45.763 118 61 2 26 141 1 117 3.29e-25 103
Msa0631180 AT5G40350.1 47.115 104 54 1 39 141 19 122 3.50e-25 101
Msa0631180 AT4G34990.1 49.020 102 51 1 39 139 14 115 4.96e-25 102
Msa0631180 AT4G13480.1 47.573 103 51 2 39 139 8 109 7.29e-25 102
Msa0631180 AT4G12350.1 45.631 103 53 2 39 139 14 115 7.38e-25 102
Msa0631180 AT1G66230.1 45.614 114 55 3 39 146 14 126 8.31e-25 102
Msa0631180 AT5G35550.1 47.059 102 53 1 39 139 16 117 8.32e-25 101
Msa0631180 AT3G12820.1 47.619 105 52 2 39 141 16 119 8.33e-25 101
Msa0631180 AT3G53200.2 61.765 68 26 0 72 139 12 79 8.76e-25 100
Msa0631180 AT1G79180.2 41.727 139 46 3 36 139 12 150 1.46e-24 102
Msa0631180 AT4G22680.1 42.742 124 64 3 39 156 14 136 1.46e-24 101
Msa0631180 AT2G36890.1 47.222 108 55 2 39 144 14 121 2.09e-24 101
Msa0631180 AT5G49330.1 49.020 102 51 1 39 139 14 115 2.48e-24 102
Msa0631180 AT2G36890.2 47.222 108 55 2 39 144 55 162 2.71e-24 102
Msa0631180 AT1G68320.1 42.308 104 57 2 39 140 21 123 3.87e-24 100
Msa0631180 AT5G14750.3 44.554 101 54 1 72 172 18 116 8.03e-24 96.7
Msa0631180 AT5G16600.1 45.614 114 55 3 39 146 14 126 2.69e-23 99.0
Msa0631180 AT5G40430.1 33.113 151 86 3 2 138 3 152 2.93e-23 97.4
Msa0631180 AT5G62320.1 37.500 160 73 6 39 185 15 160 5.62e-23 96.7
Msa0631180 AT5G14340.1 44.660 103 54 2 39 139 26 127 6.32e-23 97.1
Msa0631180 AT5G26660.2 45.299 117 52 3 72 181 17 128 8.53e-23 97.4
Msa0631180 AT2G47460.1 49.020 102 51 1 39 139 14 115 1.18e-22 97.8
Msa0631180 AT1G66370.1 34.545 165 88 4 30 181 2 159 1.73e-22 95.1
Msa0631180 AT1G48000.1 43.564 101 56 1 39 138 34 134 2.20e-22 94.7
Msa0631180 AT3G62610.1 49.020 102 51 1 39 139 14 115 2.84e-22 96.7
Msa0631180 AT1G66380.1 42.727 110 62 1 31 139 2 111 1.41e-21 89.7
Msa0631180 AT2G02820.3 40.404 99 59 0 42 140 33 131 1.79e-21 94.0
Msa0631180 AT2G02820.1 40.404 99 59 0 42 140 33 131 2.65e-21 95.1
Msa0631180 AT2G02820.2 40.404 99 59 0 42 140 33 131 3.00e-21 95.1
Msa0631180 AT5G59780.2 54.412 68 31 0 72 139 23 90 6.21e-21 90.1
Msa0631180 AT1G56650.1 41.818 110 63 1 31 139 2 111 1.23e-20 90.1
Msa0631180 AT3G46130.3 52.632 76 34 1 67 140 6 81 1.47e-20 89.4
Msa0631180 AT3G46130.4 53.623 69 32 0 72 140 23 91 1.65e-20 89.4
Msa0631180 AT5G49620.1 44.660 103 56 1 39 140 28 130 2.58e-20 90.5
Msa0631180 AT5G35550.2 57.353 68 29 0 72 139 53 120 2.84e-20 89.4
Msa0631180 AT3G06490.1 45.098 102 53 2 39 138 21 121 3.23e-20 90.5
Msa0631180 AT1G66390.1 41.818 110 63 1 31 139 2 111 3.45e-20 89.0
Msa0631180 AT1G14350.2 38.384 99 61 0 42 140 28 126 3.87e-20 91.3
Msa0631180 AT1G14350.1 38.384 99 61 0 42 140 28 126 3.87e-20 91.3
Msa0631180 AT3G12820.2 55.714 70 31 0 72 141 2 71 4.28e-20 87.0
Msa0631180 AT3G47600.2 54.412 68 31 0 72 139 42 109 1.93e-19 88.2
Msa0631180 AT3G27810.2 55.224 67 30 0 72 138 7 73 5.68e-19 83.6
Msa0631180 AT5G40350.2 52.857 70 33 0 72 141 8 77 1.43e-18 82.4
Msa0631180 AT2G37630.1 41.414 99 55 1 37 132 2 100 3.59e-18 85.1
Msa0631180 AT3G18100.3 43.617 94 53 0 39 132 498 591 1.84e-17 84.3
Msa0631180 AT3G18100.3 29.839 124 87 0 13 136 421 544 3.79e-12 68.2
Msa0631180 AT3G18100.3 34.821 112 69 3 40 147 395 506 8.29e-12 67.0
Msa0631180 AT3G18100.1 43.617 94 53 0 39 132 546 639 2.12e-17 84.0
Msa0631180 AT3G18100.1 29.839 124 87 0 13 136 469 592 4.68e-12 67.8
Msa0631180 AT3G18100.1 34.821 112 69 3 40 147 443 554 8.69e-12 67.0
Msa0631180 AT3G18100.4 43.617 94 53 0 39 132 385 478 2.58e-17 83.6
Msa0631180 AT3G18100.4 29.839 124 87 0 13 136 308 431 4.58e-12 67.8
Msa0631180 AT3G18100.4 34.821 112 69 3 40 147 282 393 1.22e-11 66.2
Msa0631180 AT3G18100.2 43.617 94 53 0 39 132 333 426 3.10e-17 83.2
Msa0631180 AT3G18100.2 29.839 124 87 0 13 136 256 379 4.40e-12 67.8
Msa0631180 AT3G18100.2 34.821 112 69 3 40 147 230 341 1.40e-11 66.2
Msa0631180 AT5G49620.2 39.316 117 56 2 39 140 28 144 5.08e-17 81.3
Msa0631180 AT5G14750.4 39.560 91 53 1 82 172 1 89 2.01e-16 75.9
Msa0631180 AT5G14750.2 39.560 91 53 1 82 172 1 89 2.01e-16 75.9
Msa0631180 AT1G71030.2 43.038 79 44 1 75 152 5 83 1.83e-15 73.9
Msa0631180 AT1G71030.1 43.038 79 44 1 75 152 19 97 1.98e-15 74.3
Msa0631180 AT1G22640.3 54.386 57 26 0 83 139 2 58 2.18e-15 74.3
Msa0631180 AT1G18960.1 35.294 119 69 4 33 146 4 119 1.58e-14 73.9
Msa0631180 AT3G23250.2 53.448 58 27 0 82 139 1 58 2.67e-14 72.0
Msa0631180 AT1G66380.3 48.529 68 35 0 72 139 11 78 6.06e-14 67.8
Msa0631180 AT1G66380.2 37.931 87 53 1 31 116 2 88 9.54e-12 61.6
Msa0631180 AT5G59780.1 48.936 47 24 0 94 140 1 47 7.64e-11 60.8

Find 114 sgRNAs with CRISPR-Local

Find 489 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTTCCGCATCTGATTT+TGG 0.155153 4_3:-13827553 None:intergenic
TTGATTGCTCGTGGGATTTC+TGG 0.173125 4_3:+13822419 Msa0631180:CDS
GTCAGTTCGGTGCTAGAAAT+TGG 0.271630 4_3:+13822393 Msa0631180:CDS
TGTAATAATGAATATGAATT+CGG 0.286689 4_3:+13827961 Msa0631180:three_prime_UTR
CACGTGCTACTGGCTTAAAA+AGG 0.288338 4_3:-13827435 None:intergenic
CTGAGAATGGCGTCTTCTTC+AGG 0.289480 4_3:-13822359 None:intergenic
ACTCTGAGGCGTCGAGGAAT+TGG 0.291399 4_3:+13827184 Msa0631180:CDS
GTTGGTGGTTGTTGTTGTTC+TGG 0.298403 4_3:-13822236 None:intergenic
TACGAATTTGTTTGCTACTA+AGG 0.311407 4_3:-13827922 None:intergenic
TGGTCCCAACAAAGAGCTTT+TGG 0.322656 4_3:-13827659 None:intergenic
CTCTGAGGCGTCGAGGAATT+GGG 0.329462 4_3:+13827185 Msa0631180:CDS
AGAATTCCAGTGGTTCTTAA+TGG 0.336432 4_3:-13827161 None:intergenic
AGGAAGAGATGTTAGTTCTA+TGG 0.342770 4_3:+13827336 Msa0631180:CDS
CCTTGCATTGGAACAGGTCT+TGG 0.356777 4_3:-13827514 None:intergenic
ATGGCATTATCTGTTCTTCC+TGG 0.361429 4_3:-13827142 None:intergenic
TTCAATTATACCATGAAGTC+AGG 0.372730 4_3:+13827401 Msa0631180:CDS
TGGCTGCCCATTTGTTTCCA+TGG 0.388447 4_3:-13827105 None:intergenic
AGCTTGATCCTTCTGTTAAA+CGG 0.393224 4_3:+13822480 Msa0631180:CDS
AGTTTCTTCAGATGATGCTT+TGG 0.397065 4_3:-13827275 None:intergenic
CAACTCCAAAAGCTCTTTGT+TGG 0.403606 4_3:+13827654 Msa0631180:CDS
CTGGCAGGGTTAATATCTAA+TGG 0.414064 4_3:+13827815 Msa0631180:CDS
ATGCAATCCATGGAAACAAA+TGG 0.418432 4_3:+13827098 Msa0631180:CDS
GTAATAATGAATATGAATTC+GGG 0.420141 4_3:+13827962 Msa0631180:three_prime_UTR
TTCTGGTTCCATGACGGTTA+CGG 0.425487 4_3:-13822219 None:intergenic
AACTCCAAAAGCTCTTTGTT+GGG 0.427043 4_3:+13827655 Msa0631180:CDS
AATGCGTATAACGCTTTCAA+TGG 0.428676 4_3:+13827469 Msa0631180:CDS
GGAAGTCGTGCCGGCTCCGA+TGG 0.433047 4_3:+13822450 Msa0631180:CDS
CATCCATGACCACACTGATT+AGG 0.440165 4_3:-13827613 None:intergenic
CGTGGGATTTCTGGAAGATC+GGG 0.440447 4_3:+13822428 Msa0631180:CDS
TCAAAACTTGTGAAAGATTG+AGG 0.443078 4_3:-13827703 None:intergenic
TGCTTGGCTTAAAAGTGGAT+TGG 0.445450 4_3:+13827759 Msa0631180:CDS
CAGACATTAGTAACCTTGCT+TGG 0.447221 4_3:+13827743 Msa0631180:CDS
ATAGGTCCTTGCATTGGAAC+AGG 0.451041 4_3:-13827520 None:intergenic
TCGGTGGATCCCTGACTTCA+TGG 0.451649 4_3:-13827411 None:intergenic
CATGGATGCTGCTCATCTCT+TGG 0.452941 4_3:+13827628 Msa0631180:CDS
GACGAAGGTTTAGCCGCATT+AGG 0.458049 4_3:+13822287 Msa0631180:CDS
AGTCGTCTTGTTAGTCAGTT+CGG 0.460173 4_3:+13822380 Msa0631180:CDS
TCGTGGGATTTCTGGAAGAT+CGG 0.460779 4_3:+13822427 Msa0631180:CDS
AACCTTGCTTGGCTTAAAAG+TGG 0.461055 4_3:+13827754 Msa0631180:CDS
TCTGAATATTCAATGAAGTC+TGG 0.473030 4_3:-13827679 None:intergenic
GAACAGCAGCGTCAAAATGA+TGG 0.474378 4_3:+13827783 Msa0631180:CDS
TTGGAGCTGATGTTGAAGGC+TGG 0.475354 4_3:-13827495 None:intergenic
AATGGATCATGATTACATAC+TGG 0.480485 4_3:+13827833 Msa0631180:exon
GGTCTTGGAGCTGATGTTGA+AGG 0.490656 4_3:-13827499 None:intergenic
TGGAGCTGATGTTGAAGGCT+GGG 0.493210 4_3:-13827494 None:intergenic
AAAGCACTTACACGTGCTAC+TGG 0.500174 4_3:-13827445 None:intergenic
TGCAATCCATGGAAACAAAT+GGG 0.500748 4_3:+13827099 Msa0631180:CDS
AACAAGTTTCGTACCAGTGA+AGG 0.504511 4_3:-13822507 None:intergenic
ACGGCGGTGCACGACGGAAG+CGG 0.506031 4_3:+13822263 Msa0631180:CDS
TTAGTAGCAAACAAATTCGT+AGG 0.508010 4_3:+13827924 Msa0631180:three_prime_UTR
TCGTGCACCGCCGTGAGAGT+TGG 0.511514 4_3:-13822254 None:intergenic
TGTTAGTTCTATGGAGATTG+TGG 0.514093 4_3:+13827345 Msa0631180:CDS
TTCTCTAACCGTAACCGTCA+TGG 0.519731 4_3:+13822211 Msa0631180:exon
ATGGCAAATCTTAATGGGAC+CGG 0.521534 4_3:+13827879 Msa0631180:three_prime_UTR
ACTAACAAGACGACTGAGAA+TGG 0.521928 4_3:-13822372 None:intergenic
ACAAATGGGCAGCCATTGCT+AGG 0.523613 4_3:+13827113 Msa0631180:CDS
TGCACCGCCGTGAGAGTTGG+TGG 0.533257 4_3:-13822251 None:intergenic
GAAGATCGGGGAAGTCGTGC+CGG 0.535316 4_3:+13822441 Msa0631180:CDS
TGACATTATGCACATCCATC+CGG 0.536843 4_3:-13827898 None:intergenic
AAGGGTTTCCGTTTAACAGA+AGG 0.537963 4_3:-13822488 None:intergenic
GTTAAACGGAAACCCTTCAC+TGG 0.542263 4_3:+13822494 Msa0631180:CDS
AATTGGAGTTTGATTGCTCG+TGG 0.545143 4_3:+13822410 Msa0631180:CDS
GTGCCTAATCAGTGTGGTCA+TGG 0.546647 4_3:+13827610 Msa0631180:CDS
GCATTAGGCGAAGGCGGTGA+AGG 0.546829 4_3:+13822302 Msa0631180:CDS
GCCATTGCTAGGCTTCTGCC+AGG 0.547052 4_3:+13827124 Msa0631180:CDS
TCTGAGGCGTCGAGGAATTG+GGG 0.551690 4_3:+13827186 Msa0631180:CDS
GCATAATTATAAGACTCGAT+TGG 0.552833 4_3:+13828026 Msa0631180:three_prime_UTR
TGTAAAATAGGTCCTTGCAT+TGG 0.557114 4_3:-13827526 None:intergenic
ATAATGCCATTAAGAACCAC+TGG 0.559681 4_3:+13827155 Msa0631180:CDS
GCTGATTACACCATCGGAGC+CGG 0.561787 4_3:-13822460 None:intergenic
GGTTTAGCCGCATTAGGCGA+AGG 0.563573 4_3:+13822293 Msa0631180:CDS
TAGTAGCAAACAAATTCGTA+GGG 0.563850 4_3:+13827925 Msa0631180:three_prime_UTR
GTTGCTGCTCATGCAATCCA+TGG 0.567764 4_3:+13827088 Msa0631180:CDS
CACGACGGAAGCGGCGACGA+AGG 0.569922 4_3:+13822272 Msa0631180:CDS
AACAGCAGCGTCAAAATGAT+GGG 0.573995 4_3:+13827784 Msa0631180:CDS
TCGAGTCTTATAATTATGCA+TGG 0.577751 4_3:-13828022 None:intergenic
CATGAGCAGCAACTATGATC+CGG 0.578076 4_3:-13827078 None:intergenic
TGATGGGTGATACTGCTGGC+AGG 0.579980 4_3:+13827800 Msa0631180:CDS
ACTAACATCTCTTCCTTCTG+AGG 0.583130 4_3:-13827329 None:intergenic
CCAAGACCTGTTCCAATGCA+AGG 0.588737 4_3:+13827514 Msa0631180:CDS
AAGTTAGAATCTAGTAACAT+GGG 0.589229 4_3:+13827229 Msa0631180:CDS
TCATGATTACATACTGGCCA+TGG 0.590262 4_3:+13827839 Msa0631180:three_prime_UTR
CTGAGGCGTCGAGGAATTGG+GGG 0.591911 4_3:+13827187 Msa0631180:CDS
ACAAGTTTCGTACCAGTGAA+GGG 0.592901 4_3:-13822506 None:intergenic
CACACTGATTAGGCACTGAT+CGG 0.594944 4_3:-13827603 None:intergenic
TTGTTGTTCTGGTTCCATGA+CGG 0.595813 4_3:-13822225 None:intergenic
ACAACAACCACCAACTCTCA+CGG 0.596382 4_3:+13822244 Msa0631180:CDS
TAAGTTAGAATCTAGTAACA+TGG 0.598010 4_3:+13827228 Msa0631180:CDS
AATTCTTTGAAATCCTCAGA+AGG 0.603835 4_3:+13827316 Msa0631180:CDS
CAAATCTTAATGGGACCGGA+TGG 0.604441 4_3:+13827883 Msa0631180:three_prime_UTR
ATTGGAGTTTGATTGCTCGT+GGG 0.605618 4_3:+13822411 Msa0631180:CDS
GATCAAGCTGATTACACCAT+CGG 0.607608 4_3:-13822466 None:intergenic
AGTAGCGGTAGCAAAGTGAA+AGG 0.608608 4_3:+13822326 Msa0631180:CDS
TCCTGGCAGAAGCCTAGCAA+TGG 0.610263 4_3:-13827125 None:intergenic
ACATTCACCAAAATCAGATG+CGG 0.614421 4_3:+13827546 Msa0631180:CDS
TCTGAAGAAACTCTATCATG+TGG 0.617207 4_3:+13827286 Msa0631180:CDS
GTAGCAAAGTGAAAGGACCT+TGG 0.631627 4_3:+13822333 Msa0631180:CDS
AGTTAGAATCTAGTAACATG+GGG 0.642008 4_3:+13827230 Msa0631180:CDS
TCAATTATACCATGAAGTCA+GGG 0.645491 4_3:+13827402 Msa0631180:CDS
TTCACCGCCTTCGCCTAATG+CGG 0.656181 4_3:-13822300 None:intergenic
GCCTCAGAGTAGAATTCCAG+TGG 0.656534 4_3:-13827171 None:intergenic
ACTCTCACGGCGGTGCACGA+CGG 0.656704 4_3:+13822257 Msa0631180:CDS
GAAGGCGGTGAAGGAAGTAG+CGG 0.657799 4_3:+13822311 Msa0631180:CDS
AAAATGATGGGTGATACTGC+TGG 0.663087 4_3:+13827796 Msa0631180:CDS
GATGGGTGATACTGCTGGCA+GGG 0.665213 4_3:+13827801 Msa0631180:CDS
GCGTCTTCTTCAGGAGACCA+AGG 0.675143 4_3:-13822350 None:intergenic
AATTCTACTCTGAGGCGTCG+AGG 0.676063 4_3:+13827178 Msa0631180:CDS
GTTAGAATCTAGTAACATGG+GGG 0.690664 4_3:+13827231 Msa0631180:CDS
TTAGAATCTAGTAACATGGG+GGG 0.693286 4_3:+13827232 Msa0631180:CDS
TTAGCCGCATTAGGCGAAGG+CGG 0.694196 4_3:+13822296 Msa0631180:CDS
GTGGGATTTCTGGAAGATCG+GGG 0.701063 4_3:+13822429 Msa0631180:CDS
ACCACTGGAATTCTACTCTG+AGG 0.701771 4_3:+13827170 Msa0631180:CDS
CGATCAGTGCCTAATCAGTG+TGG 0.715210 4_3:+13827604 Msa0631180:CDS
ACAACCACCAACTCTCACGG+CGG 0.782687 4_3:+13822247 Msa0631180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATAAAAATTATTAATAATG+TGG + chr4_3:13823009-13823028 Msa0631180:intron 10.0%
!!! AATAACAATTGAAAATTTTA+AGG - chr4_3:13824305-13824324 None:intergenic 10.0%
!! AAATAATAAGATATAATAGA+TGG - chr4_3:13827003-13827022 None:intergenic 10.0%
!!! TCGTTAAAAAAAATGTTTTT+AGG + chr4_3:13822864-13822883 Msa0631180:intron 15.0%
!!! CGTTAAAAAAAATGTTTTTA+GGG + chr4_3:13822865-13822884 Msa0631180:intron 15.0%
!!! TTTTAATTTGCTAGAATATT+TGG + chr4_3:13823631-13823650 Msa0631180:intron 15.0%
!! TCTAAGAATCAATTATTAAA+AGG - chr4_3:13824366-13824385 None:intergenic 15.0%
!!! CTAAAAAAATAAGTGTTTTT+TGG - chr4_3:13826329-13826348 None:intergenic 15.0%
!!! CAAAAAACACTTATTTTTTT+AGG + chr4_3:13826327-13826346 Msa0631180:intron 15.0%
!! TTTGATGTTTCAAATATTAT+AGG + chr4_3:13826721-13826740 Msa0631180:intron 15.0%
!!! TCTTTTTCTTTTTTTTTGAA+AGG + chr4_3:13826945-13826964 Msa0631180:intron 15.0%
!!! TTTTTTTTTTTGTATTACCA+TGG - chr4_3:13827859-13827878 None:intergenic 15.0%
!! GGTAATACAAAAAAAAAAAA+TGG + chr4_3:13827860-13827879 Msa0631180:three_prime_UTR 15.0%
!! TGTAATAATGAATATGAATT+CGG + chr4_3:13827961-13827980 Msa0631180:three_prime_UTR 15.0%
!! AATTTGATTAAGTTAAGTCT+AGG + chr4_3:13822726-13822745 Msa0631180:intron 20.0%
!! TTGAGATTATAATGAATGAT+TGG + chr4_3:13822765-13822784 Msa0631180:intron 20.0%
!! ATTATAATGAATGATTGGAA+TGG + chr4_3:13822770-13822789 Msa0631180:intron 20.0%
!! GTATAACTTATACACATTAA+CGG - chr4_3:13822835-13822854 None:intergenic 20.0%
!! GTTAATGTGTATAAGTTATA+CGG + chr4_3:13822834-13822853 Msa0631180:intron 20.0%
!! ATAAAGAAATCTTAAGAATG+TGG + chr4_3:13823289-13823308 Msa0631180:intron 20.0%
!! TAAAAAAATGTCCTGTTTAT+TGG + chr4_3:13823340-13823359 Msa0631180:intron 20.0%
!!! CATCTAAAATATTGATATTG+TGG + chr4_3:13823493-13823512 Msa0631180:intron 20.0%
!!! TTTTCACCATTATTACAAAT+GGG - chr4_3:13824237-13824256 None:intergenic 20.0%
!!! ATTTTCACCATTATTACAAA+TGG - chr4_3:13824238-13824257 None:intergenic 20.0%
!!! TAAGTCTAAGAATTATTTCT+TGG - chr4_3:13824479-13824498 None:intergenic 20.0%
!! AAACTTCAGTAATTATTTAC+TGG + chr4_3:13824531-13824550 Msa0631180:intron 20.0%
!! CATAATACAAAAAATGTGTA+AGG - chr4_3:13825138-13825157 None:intergenic 20.0%
!!! CTTACACATTTTTTGTATTA+TGG + chr4_3:13825136-13825155 Msa0631180:intron 20.0%
!!! AATGGTGATTTTCTATAAAT+TGG - chr4_3:13825236-13825255 None:intergenic 20.0%
!! ACAATATTATATTATGCTGA+TGG - chr4_3:13825321-13825340 None:intergenic 20.0%
!! ATATTGTATATAGTCATTGA+TGG + chr4_3:13825334-13825353 Msa0631180:intron 20.0%
!! AGAGTAATATAAAGATGAAA+AGG + chr4_3:13826120-13826139 Msa0631180:intron 20.0%
!! AAAATCTAAGAATTCTATCT+TGG - chr4_3:13826540-13826559 None:intergenic 20.0%
!!! AGAATTCTTAGATTTTAAAG+AGG + chr4_3:13826544-13826563 Msa0631180:intron 20.0%
!!! TAGTATTAGTAATTTTGTGT+TGG + chr4_3:13826670-13826689 Msa0631180:intron 20.0%
!!! TTTCTTTTTTTTTGAAAGGA+TGG + chr4_3:13826949-13826968 Msa0631180:intron 20.0%
!!! AATATAATGTTTTTCAGATG+AGG + chr4_3:13827051-13827070 Msa0631180:intron 20.0%
!! AAAAAAATGGCAAATCTTAA+TGG + chr4_3:13827873-13827892 Msa0631180:three_prime_UTR 20.0%
!! AAAAAATGGCAAATCTTAAT+GGG + chr4_3:13827874-13827893 Msa0631180:three_prime_UTR 20.0%
!! GTAATAATGAATATGAATTC+GGG + chr4_3:13827962-13827981 Msa0631180:three_prime_UTR 20.0%
!! AGGATAAACCTTTAAGTTAT+TGG + chr4_3:13823051-13823070 Msa0631180:intron 25.0%
!! AACCTTTAAGTTATTGGAAA+AGG + chr4_3:13823057-13823076 Msa0631180:intron 25.0%
!! AACCTTTTCCAATAACTTAA+AGG - chr4_3:13823062-13823081 None:intergenic 25.0%
! CAAAAAAATCATGAAGTTAC+AGG + chr4_3:13823175-13823194 Msa0631180:intron 25.0%
! AGTATAAGTGTAATACTACA+AGG + chr4_3:13823376-13823395 Msa0631180:intron 25.0%
!!! TGGGATTTTTTAAAGCTTAA+TGG + chr4_3:13823570-13823589 Msa0631180:intron 25.0%
! ACGAATTAATGTTATCATTC+TGG + chr4_3:13823596-13823615 Msa0631180:intron 25.0%
! AGAAAACCGTAACTATAAAT+AGG + chr4_3:13823934-13823953 Msa0631180:intron 25.0%
! TGCAAACCTATTTATAGTTA+CGG - chr4_3:13823943-13823962 None:intergenic 25.0%
!!! TTCATTATTTTGCCAATCTT+AGG - chr4_3:13824043-13824062 None:intergenic 25.0%
! AATTTCGTACTTGATATTCT+GGG + chr4_3:13824107-13824126 Msa0631180:intron 25.0%
! AACAATGTATGAAATTCACA+TGG - chr4_3:13824151-13824170 None:intergenic 25.0%
! TGAAATCCCATTTGTAATAA+TGG + chr4_3:13824228-13824247 Msa0631180:intron 25.0%
!! AAATAAACATCTTTTGATGC+TGG + chr4_3:13824254-13824273 Msa0631180:intron 25.0%
! GATATCATATAAACAGAGTT+AGG - chr4_3:13824340-13824359 None:intergenic 25.0%
!!! CTACTGATTTCATACTATTT+AGG + chr4_3:13824676-13824695 Msa0631180:intron 25.0%
!!! AGATTTGTTAGTTTTTGGTT+GGG - chr4_3:13824762-13824781 None:intergenic 25.0%
!!! CATTCAGATTTGTTAGTTTT+TGG - chr4_3:13824767-13824786 None:intergenic 25.0%
!!! CTACTGATTTCATACTATTT+AGG + chr4_3:13824676-13824695 Msa0631180:intron 25.0%
!!! ACACATTTTTTGTATTATGG+CGG + chr4_3:13825139-13825158 Msa0631180:intron 25.0%
!!! TCTGGTTTATTTCTATCAAT+AGG - chr4_3:13825165-13825184 None:intergenic 25.0%
! CTATTTGTTCATTCTATTTC+TGG - chr4_3:13825183-13825202 None:intergenic 25.0%
! AATTTCAACTACACCATTAA+AGG + chr4_3:13825814-13825833 Msa0631180:intron 25.0%
! TTTATTTGTATAGCTGTACT+TGG + chr4_3:13825948-13825967 Msa0631180:intron 25.0%
!!! TTATTTGGGATTGTTTTTAG+AGG + chr4_3:13826054-13826073 Msa0631180:intron 25.0%
!!! TATTTGGGATTGTTTTTAGA+GGG + chr4_3:13826055-13826074 Msa0631180:intron 25.0%
!! GTAAATACTTCAAAGGATTT+TGG - chr4_3:13826172-13826191 None:intergenic 25.0%
! GATTAACAATCACTAGTATT+AGG - chr4_3:13826355-13826374 None:intergenic 25.0%
! TTGGATACTATCTCTAATTT+AGG - chr4_3:13826481-13826500 None:intergenic 25.0%
!!! TAAGCAATTTTGAAAAAGGA+AGG - chr4_3:13826824-13826843 None:intergenic 25.0%
!!! GCATTAAGCAATTTTGAAAA+AGG - chr4_3:13826828-13826847 None:intergenic 25.0%
! TTTCACTTTCCTGAATATAT+AGG + chr4_3:13827020-13827039 Msa0631180:intron 25.0%
! TTTGTTTAGCCTATATATTC+AGG - chr4_3:13827032-13827051 None:intergenic 25.0%
! TAAGTTAGAATCTAGTAACA+TGG + chr4_3:13827228-13827247 Msa0631180:CDS 25.0%
! AAGTTAGAATCTAGTAACAT+GGG + chr4_3:13827229-13827248 Msa0631180:CDS 25.0%
! ATAAAAATGAAGACAAAGCA+AGG + chr4_3:13827371-13827390 Msa0631180:CDS 25.0%
!!! GATTTTGGTGAATGTAAAAT+AGG - chr4_3:13827541-13827560 None:intergenic 25.0%
! GTTTAAGAATTGTTCGAGTT+CGG + chr4_3:13822575-13822594 Msa0631180:intron 30.0%
! TTTAAGAATTGTTCGAGTTC+GGG + chr4_3:13822576-13822595 Msa0631180:intron 30.0%
! TCAAGTACTTATTCTTTTGC+AGG - chr4_3:13822900-13822919 None:intergenic 30.0%
AAAGAATAAGTACTTGACAG+AGG + chr4_3:13822903-13822922 Msa0631180:intron 30.0%
AAGAATAAGTACTTGACAGA+GGG + chr4_3:13822904-13822923 Msa0631180:intron 30.0%
!!! TTGGAAAAGGTTTTAAAGCA+TGG + chr4_3:13823070-13823089 Msa0631180:intron 30.0%
AAATCATGAAGTTACAGGAA+AGG + chr4_3:13823180-13823199 Msa0631180:intron 30.0%
AATCATGAAGTTACAGGAAA+GGG + chr4_3:13823181-13823200 Msa0631180:intron 30.0%
AAAAATGTCCTGTTTATTGG+TGG + chr4_3:13823343-13823362 Msa0631180:intron 30.0%
AAAATGTCCTGTTTATTGGT+GGG + chr4_3:13823344-13823363 Msa0631180:intron 30.0%
ATATGTGGTAGTCATTATGT+TGG + chr4_3:13823462-13823481 Msa0631180:intron 30.0%
! GACTACAATTTTCAAAACCT+TGG + chr4_3:13823533-13823552 Msa0631180:intron 30.0%
!! AGAATATTTGGATTTGCTGT+TGG + chr4_3:13823643-13823662 Msa0631180:intron 30.0%
TAAAGTAACAGCTAGATGAA+AGG - chr4_3:13823706-13823725 None:intergenic 30.0%
!! CTAGCTGTTACTTTATCAAT+TGG + chr4_3:13823711-13823730 Msa0631180:intron 30.0%
! TTACGCCAATAATGTTGATT+GGG + chr4_3:13823744-13823763 Msa0631180:intron 30.0%
!! TGACAATTTTGTCGTTTAAC+AGG + chr4_3:13823891-13823910 Msa0631180:intron 30.0%
!! AATTTTGTCGTTTAACAGGA+GGG + chr4_3:13823895-13823914 Msa0631180:intron 30.0%
TATCAAGTACGAAATTCACA+AGG - chr4_3:13824103-13824122 None:intergenic 30.0%
GAATTTCGTACTTGATATTC+TGG + chr4_3:13824106-13824125 Msa0631180:intron 30.0%
TAAAAAGAGTAGTACCTTAG+CGG + chr4_3:13824497-13824516 Msa0631180:intron 30.0%
ATTTACTGGATCACAAATAG+AGG + chr4_3:13824545-13824564 Msa0631180:intron 30.0%
!!! GCATTCAGATTTTAGTTTTG+GGG - chr4_3:13824648-13824667 None:intergenic 30.0%
!!! GGCATTCAGATTTTAGTTTT+GGG - chr4_3:13824649-13824668 None:intergenic 30.0%
TATGAAATCAGTAGAAGATG+GGG - chr4_3:13824670-13824689 None:intergenic 30.0%
GTATGAAATCAGTAGAAGAT+GGG - chr4_3:13824671-13824690 None:intergenic 30.0%
AGTATGAAATCAGTAGAAGA+TGG - chr4_3:13824672-13824691 None:intergenic 30.0%
!!! CAGATTTGTTAGTTTTTGGT+TGG - chr4_3:13824763-13824782 None:intergenic 30.0%
AGTATGAAATCAGTAGAAGA+CGG - chr4_3:13824672-13824691 None:intergenic 30.0%
AGAACTCTTGTAAAACAAGA+TGG - chr4_3:13824928-13824947 None:intergenic 30.0%
! GTTCTTAAAAAGAAGCATGA+AGG - chr4_3:13825053-13825072 None:intergenic 30.0%
! GTTTTATGTAGTCAGCTAAT+CGG - chr4_3:13825094-13825113 None:intergenic 30.0%
ACAAAAAATGTGTAAGGCAA+GGG - chr4_3:13825132-13825151 None:intergenic 30.0%
TACAAAAAATGTGTAAGGCA+AGG - chr4_3:13825133-13825152 None:intergenic 30.0%
GTCAACTCATAGCAAATAAT+GGG - chr4_3:13825362-13825381 None:intergenic 30.0%
AGTCAACTCATAGCAAATAA+TGG - chr4_3:13825363-13825382 None:intergenic 30.0%
ACCGAATTGCTTAAATTTGA+GGG - chr4_3:13825588-13825607 None:intergenic 30.0%
AACCGAATTGCTTAAATTTG+AGG - chr4_3:13825589-13825608 None:intergenic 30.0%
AAAAGGAATTCAGCAATTTC+TGG - chr4_3:13825774-13825793 None:intergenic 30.0%
AAGAATACTGATGCTGTAAA+AGG - chr4_3:13825791-13825810 None:intergenic 30.0%
TGAGAATGTCTCCTATATTT+AGG + chr4_3:13825902-13825921 Msa0631180:intron 30.0%
AAGTCACATCTCCTAAATAT+AGG - chr4_3:13825916-13825935 None:intergenic 30.0%
! ATTTAGGAGATGTGACTTTT+CGG + chr4_3:13825918-13825937 Msa0631180:intron 30.0%
TTCCTACTTTCTTAGTTGTT+TGG + chr4_3:13825972-13825991 Msa0631180:intron 30.0%
TCCTACTTTCTTAGTTGTTT+GGG + chr4_3:13825973-13825992 Msa0631180:intron 30.0%
!!! ATTTGGGATTGTTTTTAGAG+GGG + chr4_3:13826056-13826075 Msa0631180:intron 30.0%
GATTTGGGTAAATACTTCAA+AGG - chr4_3:13826179-13826198 None:intergenic 30.0%
!! GTTTCTGGTGTTTAGTTTAA+TGG + chr4_3:13826226-13826245 Msa0631180:intron 30.0%
AAGTTGAAAGGAAAAAAGAG+GGG - chr4_3:13826306-13826325 None:intergenic 30.0%
GAAGTTGAAAGGAAAAAAGA+GGG - chr4_3:13826307-13826326 None:intergenic 30.0%
!!! AGTGTTTTTTGGAAGTTGAA+AGG - chr4_3:13826318-13826337 None:intergenic 30.0%
ATATGTAATCAATCATGCTG+AGG + chr4_3:13826379-13826398 Msa0631180:intron 30.0%
! CTGTTAACTAAATTGACTCA+GGG - chr4_3:13826409-13826428 None:intergenic 30.0%
! ACTGTTAACTAAATTGACTC+AGG - chr4_3:13826410-13826429 None:intergenic 30.0%
AGATAGTATCCAACATGATA+TGG + chr4_3:13826488-13826507 Msa0631180:intron 30.0%
AGAGAATCTAAGCTTGTAAT+AGG + chr4_3:13826636-13826655 Msa0631180:intron 30.0%
TATGTGAATCTCTACTGTAT+TGG + chr4_3:13826785-13826804 Msa0631180:intron 30.0%
!! ATAATGTTTTTCAGATGAGG+AGG + chr4_3:13827054-13827073 Msa0631180:intron 30.0%
AGTTAGAATCTAGTAACATG+GGG + chr4_3:13827230-13827249 Msa0631180:CDS 30.0%
!! AATTCTTTGAAATCCTCAGA+AGG + chr4_3:13827316-13827335 Msa0631180:CDS 30.0%
TTCAATTATACCATGAAGTC+AGG + chr4_3:13827401-13827420 Msa0631180:CDS 30.0%
TCAATTATACCATGAAGTCA+GGG + chr4_3:13827402-13827421 Msa0631180:CDS 30.0%
TCTGAATATTCAATGAAGTC+TGG - chr4_3:13827682-13827701 None:intergenic 30.0%
TCAAAACTTGTGAAAGATTG+AGG - chr4_3:13827706-13827725 None:intergenic 30.0%
!!! ATCTTTCACAAGTTTTGAGT+TGG + chr4_3:13827708-13827727 Msa0631180:CDS 30.0%
AATGGATCATGATTACATAC+TGG + chr4_3:13827833-13827852 Msa0631180:exon 30.0%
! TACGAATTTGTTTGCTACTA+AGG - chr4_3:13827925-13827944 None:intergenic 30.0%
TTAGTAGCAAACAAATTCGT+AGG + chr4_3:13827924-13827943 Msa0631180:three_prime_UTR 30.0%
TAGTAGCAAACAAATTCGTA+GGG + chr4_3:13827925-13827944 Msa0631180:three_prime_UTR 30.0%
! TCGAGTCTTATAATTATGCA+TGG - chr4_3:13828025-13828044 None:intergenic 30.0%
GCATAATTATAAGACTCGAT+TGG + chr4_3:13828026-13828045 Msa0631180:three_prime_UTR 30.0%
AGCTTGATCCTTCTGTTAAA+CGG + chr4_3:13822480-13822499 Msa0631180:CDS 35.0%
TTTCGTTGTTAACGTTAGTC+TGG + chr4_3:13822553-13822572 Msa0631180:intron 35.0%
ACTTAAAGCACAAACCATTC+AGG - chr4_3:13822606-13822625 None:intergenic 35.0%
TGAAGTTCGTTAACCATTTG+AGG + chr4_3:13822625-13822644 Msa0631180:intron 35.0%
ACCATTTGAGGACAATCATT+TGG + chr4_3:13822637-13822656 Msa0631180:intron 35.0%
ACCAAATGATTGTCCTCAAA+TGG - chr4_3:13822641-13822660 None:intergenic 35.0%
GTCTAGATTGCAAAAGAACA+AGG + chr4_3:13823031-13823050 Msa0631180:intron 35.0%
!!! AAGGTTTTAAAGCATGGTTG+TGG + chr4_3:13823076-13823095 Msa0631180:intron 35.0%
! TTTTACGCAGGAAAGATTTG+TGG + chr4_3:13823101-13823120 Msa0631180:intron 35.0%
AAAGATTTGTGGTCAATGTG+TGG + chr4_3:13823112-13823131 Msa0631180:intron 35.0%
CACGATTCTTCATAGTGTAA+AGG - chr4_3:13823227-13823246 None:intergenic 35.0%
CTTTACACTATGAAGAATCG+TGG + chr4_3:13823225-13823244 Msa0631180:intron 35.0%
TGTCTCAATGAATCCAATTG+AGG - chr4_3:13823270-13823289 None:intergenic 35.0%
AAAATCACCCACCAATAAAC+AGG - chr4_3:13823354-13823373 None:intergenic 35.0%
!!! AAGGTTTTGAATTGCTGTTG+CGG + chr4_3:13823395-13823414 Msa0631180:intron 35.0%
ACACATGTCCACAATTTACA+TGG - chr4_3:13823439-13823458 None:intergenic 35.0%
TGATATTGTGGTTACGACTT+TGG + chr4_3:13823505-13823524 Msa0631180:intron 35.0%
CTTGGTTTAATGTGACATGT+GGG + chr4_3:13823551-13823570 Msa0631180:intron 35.0%
GTTACGCCAATAATGTTGAT+TGG + chr4_3:13823743-13823762 Msa0631180:intron 35.0%
ACCATCCCAATCAACATTAT+TGG - chr4_3:13823752-13823771 None:intergenic 35.0%
CAAGAATCACGGAAATTAGT+TGG - chr4_3:13823799-13823818 None:intergenic 35.0%
CACTACTATAGCAAGAATCA+CGG - chr4_3:13823810-13823829 None:intergenic 35.0%
! TGATTCTTGCTATAGTAGTG+TGG + chr4_3:13823810-13823829 Msa0631180:intron 35.0%
TGTGGTTATATTTGCGAAGT+GGG + chr4_3:13823828-13823847 Msa0631180:intron 35.0%
!! CAATTTTGTCGTTTAACAGG+AGG + chr4_3:13823894-13823913 Msa0631180:intron 35.0%
AATATACCCTTCAACCATGT+GGG - chr4_3:13824001-13824020 None:intergenic 35.0%
AAATATACCCTTCAACCATG+TGG - chr4_3:13824002-13824021 None:intergenic 35.0%
TTTGACTCTGTTCCTAAGAT+TGG + chr4_3:13824028-13824047 Msa0631180:intron 35.0%
! TAACTAGCTTGCAGCATAAT+AGG - chr4_3:13824433-13824452 None:intergenic 35.0%
TAAAACGATATCCCATCACT+TGG + chr4_3:13824451-13824470 Msa0631180:intron 35.0%
! TTTTCATTCTCTTTCCGCTA+AGG - chr4_3:13824514-13824533 None:intergenic 35.0%
TAGTAGTGACTCACTTGTAA+AGG - chr4_3:13824612-13824631 None:intergenic 35.0%
!!! GGGCATTCAGATTTTAGTTT+TGG - chr4_3:13824650-13824669 None:intergenic 35.0%
TTAGTCAGTTAGCACTGTTA+AGG - chr4_3:13824713-13824732 None:intergenic 35.0%
CAGTTAGCATTGTTCAAACT+AGG - chr4_3:13824739-13824758 None:intergenic 35.0%
TATGAAATCAGTAGAAGACG+GGG - chr4_3:13824790-13824809 None:intergenic 35.0%
GTATGAAATCAGTAGAAGAC+GGG - chr4_3:13824791-13824810 None:intergenic 35.0%
GCTTAGAGTAATCATAGAAC+CGG - chr4_3:13824864-13824883 None:intergenic 35.0%
CTCTAAGCCAATTAATCTCT+TGG + chr4_3:13824876-13824895 Msa0631180:intron 35.0%
! TGATGGACCAAGAGATTAAT+TGG - chr4_3:13824886-13824905 None:intergenic 35.0%
AAAACAAGATGGACCTTCAA+CGG - chr4_3:13824917-13824936 None:intergenic 35.0%
! TTTTACAAGAGTTCTCAGAG+TGG + chr4_3:13824933-13824952 Msa0631180:intron 35.0%
TTGTTAAGATGAATCCCAAC+CGG - chr4_3:13824984-13825003 None:intergenic 35.0%
CAAACAAGTGAACAGAAGAA+AGG - chr4_3:13825011-13825030 None:intergenic 35.0%
!! CTTTTTAAGAACCTGTGCAT+TGG + chr4_3:13825061-13825080 Msa0631180:intron 35.0%
CAAAAAATGTGTAAGGCAAG+GGG - chr4_3:13825131-13825150 None:intergenic 35.0%
GATTGACAGGTGAAGAAAAA+TGG - chr4_3:13825254-13825273 None:intergenic 35.0%
! TTGACGTCAACTATGGTTTT+GGG - chr4_3:13825417-13825436 None:intergenic 35.0%
! TTTGACGTCAACTATGGTTT+TGG - chr4_3:13825418-13825437 None:intergenic 35.0%
CCATAGTTGACGTCAAATTA+CGG + chr4_3:13825421-13825440 Msa0631180:intron 35.0%
ATCCAAGAATTTCTCCACTT+TGG + chr4_3:13825538-13825557 Msa0631180:intron 35.0%
TCCAAGAATTTCTCCACTTT+GGG + chr4_3:13825539-13825558 Msa0631180:intron 35.0%
GCCCTCAAATTTAAGCAATT+CGG + chr4_3:13825584-13825603 Msa0631180:intron 35.0%
ACAGACAAATAAGGAGAAAG+AGG - chr4_3:13825671-13825690 None:intergenic 35.0%
! TCCTTATTTGTCTGTGACTT+GGG + chr4_3:13825676-13825695 Msa0631180:intron 35.0%
! ATAAGGCATCAACTTTGAGA+CGG - chr4_3:13825734-13825753 None:intergenic 35.0%
ATAGGAGATACTATCCAACT+GGG - chr4_3:13825878-13825897 None:intergenic 35.0%
AATAGGAGATACTATCCAAC+TGG - chr4_3:13825879-13825898 None:intergenic 35.0%
AGGAGACATTCTCACTAAAT+AGG - chr4_3:13825896-13825915 None:intergenic 35.0%
TCCCAAACAACTAAGAAAGT+AGG - chr4_3:13825977-13825996 None:intergenic 35.0%
TTCTTAGTTGTTTGGGAGTT+AGG + chr4_3:13825980-13825999 Msa0631180:intron 35.0%
AACAATCCCAAATAAAGCGA+GGG - chr4_3:13826049-13826068 None:intergenic 35.0%
AAACAATCCCAAATAAAGCG+AGG - chr4_3:13826050-13826069 None:intergenic 35.0%
GGGAACTCAAAAGATGATTT+GGG - chr4_3:13826194-13826213 None:intergenic 35.0%
AAAAAGAGGGGAAAGAGAAA+GGG - chr4_3:13826294-13826313 None:intergenic 35.0%
AAAAAAGAGGGGAAAGAGAA+AGG - chr4_3:13826295-13826314 None:intergenic 35.0%
GGAAGTTGAAAGGAAAAAAG+AGG - chr4_3:13826308-13826327 None:intergenic 35.0%
!! AGATTTTAAAGAGGAAGCAG+AGG + chr4_3:13826553-13826572 Msa0631180:intron 35.0%
!! GATTTTAAAGAGGAAGCAGA+GGG + chr4_3:13826554-13826573 Msa0631180:intron 35.0%
AATTGTTCACTGAATCACAG+AGG + chr4_3:13826609-13826628 Msa0631180:intron 35.0%
ATGCAATCCATGGAAACAAA+TGG + chr4_3:13827098-13827117 Msa0631180:CDS 35.0%
TGCAATCCATGGAAACAAAT+GGG + chr4_3:13827099-13827118 Msa0631180:CDS 35.0%
ATAATGCCATTAAGAACCAC+TGG + chr4_3:13827155-13827174 Msa0631180:CDS 35.0%
AGAATTCCAGTGGTTCTTAA+TGG - chr4_3:13827164-13827183 None:intergenic 35.0%
GTTAGAATCTAGTAACATGG+GGG + chr4_3:13827231-13827250 Msa0631180:CDS 35.0%
TTAGAATCTAGTAACATGGG+GGG + chr4_3:13827232-13827251 Msa0631180:CDS 35.0%
AGTTTCTTCAGATGATGCTT+TGG - chr4_3:13827278-13827297 None:intergenic 35.0%
TCTGAAGAAACTCTATCATG+TGG + chr4_3:13827286-13827305 Msa0631180:CDS 35.0%
!! AGGAAGAGATGTTAGTTCTA+TGG + chr4_3:13827336-13827355 Msa0631180:CDS 35.0%
!! TGTTAGTTCTATGGAGATTG+TGG + chr4_3:13827345-13827364 Msa0631180:CDS 35.0%
AATGCGTATAACGCTTTCAA+TGG + chr4_3:13827469-13827488 Msa0631180:CDS 35.0%
TGTAAAATAGGTCCTTGCAT+TGG - chr4_3:13827529-13827548 None:intergenic 35.0%
ACATTCACCAAAATCAGATG+CGG + chr4_3:13827546-13827565 Msa0631180:CDS 35.0%
! CAAATTTCCGCATCTGATTT+TGG - chr4_3:13827556-13827575 None:intergenic 35.0%
AACTCCAAAAGCTCTTTGTT+GGG + chr4_3:13827655-13827674 Msa0631180:CDS 35.0%
!! TTGTTGTTCTGGTTCCATGA+CGG - chr4_3:13822228-13822247 None:intergenic 40.0%
ACTAACAAGACGACTGAGAA+TGG - chr4_3:13822375-13822394 None:intergenic 40.0%
! AGTCGTCTTGTTAGTCAGTT+CGG + chr4_3:13822380-13822399 Msa0631180:CDS 40.0%
AATTGGAGTTTGATTGCTCG+TGG + chr4_3:13822410-13822429 Msa0631180:CDS 40.0%
ATTGGAGTTTGATTGCTCGT+GGG + chr4_3:13822411-13822430 Msa0631180:CDS 40.0%
GATCAAGCTGATTACACCAT+CGG - chr4_3:13822469-13822488 None:intergenic 40.0%
AAGGGTTTCCGTTTAACAGA+AGG - chr4_3:13822491-13822510 None:intergenic 40.0%
ACAAGTTTCGTACCAGTGAA+GGG - chr4_3:13822509-13822528 None:intergenic 40.0%
AACAAGTTTCGTACCAGTGA+AGG - chr4_3:13822510-13822529 None:intergenic 40.0%
!!! TGACAGAGGGTTTTAAAGCA+TGG + chr4_3:13822917-13822936 Msa0631180:intron 40.0%
TGTATCTACGACTCCAAATG+AGG - chr4_3:13822991-13823010 None:intergenic 40.0%
!! TGTCTCTAAGACTGCAATTG+AGG - chr4_3:13823157-13823176 None:intergenic 40.0%
TGAAGAATCGTGGTCAAATG+TGG + chr4_3:13823235-13823254 Msa0631180:intron 40.0%
TCTTAAGAATGTGGCCTAGA+TGG + chr4_3:13823298-13823317 Msa0631180:intron 40.0%
AAAGTCAGCAATTGCCATCT+AGG - chr4_3:13823315-13823334 None:intergenic 40.0%
! CAATTTACATGGTACCGGAA+CGG - chr4_3:13823428-13823447 None:intergenic 40.0%
TTCCGGTACCATGTAAATTG+TGG + chr4_3:13823428-13823447 Msa0631180:intron 40.0%
GTCCACAATTTACATGGTAC+CGG - chr4_3:13823433-13823452 None:intergenic 40.0%
CCACATGTCACATTAAACCA+AGG - chr4_3:13823553-13823572 None:intergenic 40.0%
CCTTGGTTTAATGTGACATG+TGG + chr4_3:13823550-13823569 Msa0631180:intron 40.0%
! GCCAATAATGTTGATTGGGA+TGG + chr4_3:13823748-13823767 Msa0631180:intron 40.0%
GTGTGGTTATATTTGCGAAG+TGG + chr4_3:13823827-13823846 Msa0631180:intron 40.0%
! ATTGTCACACCCAACTTTTC+CGG - chr4_3:13823878-13823897 None:intergenic 40.0%
TGAACTTGATGTTCTGACCT+AGG + chr4_3:13824059-13824078 Msa0631180:intron 40.0%
ACAAGGAAGCTCAAATGATG+AGG - chr4_3:13824086-13824105 None:intergenic 40.0%
ATCTTATTCTGCAGCCATGT+AGG + chr4_3:13824183-13824202 Msa0631180:intron 40.0%
AGCCATGTAGGTTTCACATA+TGG + chr4_3:13824195-13824214 Msa0631180:intron 40.0%
GACCATATGTGAAACCTACA+TGG - chr4_3:13824200-13824219 None:intergenic 40.0%
!! ATTTCTTGGTGCCAAGTGAT+GGG - chr4_3:13824465-13824484 None:intergenic 40.0%
!! TATTTCTTGGTGCCAAGTGA+TGG - chr4_3:13824466-13824485 None:intergenic 40.0%
AAGAGGATTCTTGTCTCCTT+TGG - chr4_3:13824571-13824590 None:intergenic 40.0%
CAAAGGAAAACACATGGAAG+AGG - chr4_3:13824588-13824607 None:intergenic 40.0%
! CTCTTCCATGTGTTTTCCTT+TGG + chr4_3:13824586-13824605 Msa0631180:intron 40.0%
AAAGGCCAAAGGAAAACACA+TGG - chr4_3:13824594-13824613 None:intergenic 40.0%
AGTTAGCACTGTTAAGGCTA+GGG - chr4_3:13824707-13824726 None:intergenic 40.0%
AGAGTAATCATAGAACCGGA+CGG - chr4_3:13824860-13824879 None:intergenic 40.0%
AAACAAGATGGACCTTCAAC+GGG - chr4_3:13824916-13824935 None:intergenic 40.0%
TGTTAAGATGAATCCCAACC+GGG - chr4_3:13824983-13825002 None:intergenic 40.0%
TTAAGAACCTGTGCATTGGA+TGG + chr4_3:13825065-13825084 Msa0631180:intron 40.0%
TAAGAACCTGTGCATTGGAT+GGG + chr4_3:13825066-13825085 Msa0631180:intron 40.0%
!! TGACGTCAACTATGGTTTTG+GGG - chr4_3:13825416-13825435 None:intergenic 40.0%
CCGTAATTTGACGTCAACTA+TGG - chr4_3:13825424-13825443 None:intergenic 40.0%
ACCCAAAGTGGAGAAATTCT+TGG - chr4_3:13825543-13825562 None:intergenic 40.0%
TTTGAGGGCAGCAATTTGAT+GGG - chr4_3:13825573-13825592 None:intergenic 40.0%
ATTTGAGGGCAGCAATTTGA+TGG - chr4_3:13825574-13825593 None:intergenic 40.0%
!! AGATGTTGACTCATAGCAGA+AGG + chr4_3:13825620-13825639 Msa0631180:intron 40.0%
GTCACAAAAGGATGGTGATT+TGG - chr4_3:13825647-13825666 None:intergenic 40.0%
AAAGAGGAGTCACAAAAGGA+TGG - chr4_3:13825655-13825674 None:intergenic 40.0%
! CTCCTTATTTGTCTGTGACT+TGG + chr4_3:13825675-13825694 Msa0631180:intron 40.0%
ACCCAAGTCACAGACAAATA+AGG - chr4_3:13825680-13825699 None:intergenic 40.0%
TGTTTCCTATTGTACCCAGT+TGG + chr4_3:13825861-13825880 Msa0631180:intron 40.0%
ACTATCCAACTGGGTACAAT+AGG - chr4_3:13825869-13825888 None:intergenic 40.0%
TTAGTTGTTTGGGAGTTAGG+AGG + chr4_3:13825983-13826002 Msa0631180:intron 40.0%
GAGTTAGGAGGTGAAGAAAA+GGG + chr4_3:13825995-13826014 Msa0631180:intron 40.0%
GGGGAACTCAAAAGATGATT+TGG - chr4_3:13826195-13826214 None:intergenic 40.0%
!!! TCTTTTGAGTTCCCCCAAAT+TGG + chr4_3:13826200-13826219 Msa0631180:intron 40.0%
AAATAAAACCCCATGCCAAG+TGG + chr4_3:13826252-13826271 Msa0631180:intron 40.0%
AATAAAACCCCATGCCAAGT+GGG + chr4_3:13826253-13826272 Msa0631180:intron 40.0%
! TACCTGTGCTTGCAAGTTTT+GGG + chr4_3:13826448-13826467 Msa0631180:intron 40.0%
TCCAACATGATATGGTACGT+TGG + chr4_3:13826496-13826515 Msa0631180:intron 40.0%
TCCAACGTACCATATCATGT+TGG - chr4_3:13826500-13826519 None:intergenic 40.0%
AATGACGCGACATAGACATA+GGG - chr4_3:13826857-13826876 None:intergenic 40.0%
AAATGACGCGACATAGACAT+AGG - chr4_3:13826858-13826877 None:intergenic 40.0%
GTGTCCCATTTGTTCTTCAT+GGG + chr4_3:13826885-13826904 Msa0631180:intron 40.0%
TGTCCCATTTGTTCTTCATG+GGG + chr4_3:13826886-13826905 Msa0631180:intron 40.0%
ACACCCCATGAAGAACAAAT+GGG - chr4_3:13826892-13826911 None:intergenic 40.0%
ATGGCATTATCTGTTCTTCC+TGG - chr4_3:13827145-13827164 None:intergenic 40.0%
ACTAACATCTCTTCCTTCTG+AGG - chr4_3:13827332-13827351 None:intergenic 40.0%
!! ACGTGCTACTGGCTTAAAAA+GGG - chr4_3:13827437-13827456 None:intergenic 40.0%
CAACTCCAAAAGCTCTTTGT+TGG + chr4_3:13827654-13827673 Msa0631180:CDS 40.0%
CAGACATTAGTAACCTTGCT+TGG + chr4_3:13827743-13827762 Msa0631180:CDS 40.0%
AACCTTGCTTGGCTTAAAAG+TGG + chr4_3:13827754-13827773 Msa0631180:CDS 40.0%
!! ATCCACTTTTAAGCCAAGCA+AGG - chr4_3:13827759-13827778 None:intergenic 40.0%
TGCTTGGCTTAAAAGTGGAT+TGG + chr4_3:13827759-13827778 Msa0631180:CDS 40.0%
AACAGCAGCGTCAAAATGAT+GGG + chr4_3:13827784-13827803 Msa0631180:CDS 40.0%
!! AAAATGATGGGTGATACTGC+TGG + chr4_3:13827796-13827815 Msa0631180:CDS 40.0%
CTGGCAGGGTTAATATCTAA+TGG + chr4_3:13827815-13827834 Msa0631180:CDS 40.0%
TCATGATTACATACTGGCCA+TGG + chr4_3:13827839-13827858 Msa0631180:three_prime_UTR 40.0%
ATGGCAAATCTTAATGGGAC+CGG + chr4_3:13827879-13827898 Msa0631180:three_prime_UTR 40.0%
TGACATTATGCACATCCATC+CGG - chr4_3:13827901-13827920 None:intergenic 40.0%
TTCTCTAACCGTAACCGTCA+TGG + chr4_3:13822211-13822230 Msa0631180:exon 45.0%
!! TTCTGGTTCCATGACGGTTA+CGG - chr4_3:13822222-13822241 None:intergenic 45.0%
!! GTTGGTGGTTGTTGTTGTTC+TGG - chr4_3:13822239-13822258 None:intergenic 45.0%
ACAACAACCACCAACTCTCA+CGG + chr4_3:13822244-13822263 Msa0631180:CDS 45.0%
AGTAGCGGTAGCAAAGTGAA+AGG + chr4_3:13822326-13822345 Msa0631180:CDS 45.0%
GTAGCAAAGTGAAAGGACCT+TGG + chr4_3:13822333-13822352 Msa0631180:CDS 45.0%
!! GTCAGTTCGGTGCTAGAAAT+TGG + chr4_3:13822393-13822412 Msa0631180:CDS 45.0%
TTGATTGCTCGTGGGATTTC+TGG + chr4_3:13822419-13822438 Msa0631180:CDS 45.0%
! TCGTGGGATTTCTGGAAGAT+CGG + chr4_3:13822427-13822446 Msa0631180:CDS 45.0%
GTTAAACGGAAACCCTTCAC+TGG + chr4_3:13822494-13822513 Msa0631180:CDS 45.0%
! AGTCTAGGTTTCGAGCATTG+TGG + chr4_3:13822741-13822760 Msa0631180:intron 45.0%
AAAGCATGGTTGTGATCGCA+TGG + chr4_3:13822931-13822950 Msa0631180:intron 45.0%
GTGGTCAATGTGGTGAAATG+TGG + chr4_3:13822956-13822975 Msa0631180:intron 45.0%
TCAATGTGGTGAAATGTGGC+TGG + chr4_3:13822960-13822979 Msa0631180:intron 45.0%
! ATGGTTGTGGTCTTTTACGC+AGG + chr4_3:13823089-13823108 Msa0631180:intron 45.0%
GGTCAATGTGTGGTCAAATG+TGG + chr4_3:13823122-13823141 Msa0631180:intron 45.0%
AATGTGTGGTCAAATGTGGC+TGG + chr4_3:13823126-13823145 Msa0631180:intron 45.0%
! TGAATTGCTGTTGCGGTTCA+TGG + chr4_3:13823402-13823421 Msa0631180:intron 45.0%
GTGGACATGTGTTGCATATG+TGG + chr4_3:13823447-13823466 Msa0631180:intron 45.0%
! TGTGGTTACGACTTTGGTTC+TGG + chr4_3:13823511-13823530 Msa0631180:intron 45.0%
GTCTCAAACTTGAACCACTC+CGG + chr4_3:13823856-13823875 Msa0631180:intron 45.0%
TTGAACCACTCCGGAAAAGT+TGG + chr4_3:13823865-13823884 Msa0631180:intron 45.0%
TGAACCACTCCGGAAAAGTT+GGG + chr4_3:13823866-13823885 Msa0631180:intron 45.0%
AATCGTCCCACATGGTTGAA+GGG + chr4_3:13823992-13824011 Msa0631180:intron 45.0%
AGCTCAAATGATGAGGACCT+AGG - chr4_3:13824079-13824098 None:intergenic 45.0%
GGATCACAAATAGAGGCCAA+AGG + chr4_3:13824552-13824571 Msa0631180:intron 45.0%
GACTCACTTGTAAAGGCCAA+AGG - chr4_3:13824605-13824624 None:intergenic 45.0%
CAGTTAGCACTGTTAAGGCT+AGG - chr4_3:13824708-13824727 None:intergenic 45.0%
!! CTAGCCTTAACAGTGCTATC+CGG + chr4_3:13824826-13824845 Msa0631180:intron 45.0%
TTAGCCGGATAGCACTGTTA+AGG - chr4_3:13824833-13824852 None:intergenic 45.0%
CTTCAACGGGATGACATTGA+TGG - chr4_3:13824903-13824922 None:intergenic 45.0%
CATCAATGTCATCCCGTTGA+AGG + chr4_3:13824901-13824920 Msa0631180:intron 45.0%
GCATATGCTTGAAGATCCAG+AGG - chr4_3:13825299-13825318 None:intergenic 45.0%
!!! TGGTTTTGGGGAAGGAGTAT+GGG - chr4_3:13825404-13825423 None:intergenic 45.0%
!!! ATGGTTTTGGGGAAGGAGTA+TGG - chr4_3:13825405-13825424 None:intergenic 45.0%
!!! GTCAACTATGGTTTTGGGGA+AGG - chr4_3:13825412-13825431 None:intergenic 45.0%
CGGTCTTCTAACTCAAAAGC+TGG + chr4_3:13825441-13825460 Msa0631180:intron 45.0%
!! ATGGGATGGATTACCCAAAG+TGG - chr4_3:13825555-13825574 None:intergenic 45.0%
GGAGAAAGAGGAGTCACAAA+AGG - chr4_3:13825659-13825678 None:intergenic 45.0%
! GTCTGTGACTTGGGTGTATT+TGG + chr4_3:13825685-13825704 Msa0631180:intron 45.0%
! GACTTGGGTGTATTTGGAGT+AGG + chr4_3:13825691-13825710 Msa0631180:intron 45.0%
!! CAACTTTGAGACGGAAGAAG+AGG - chr4_3:13825725-13825744 None:intergenic 45.0%
!! CCATGGAGAGTGTCCTTTAA+TGG - chr4_3:13825830-13825849 None:intergenic 45.0%
CCATTAAAGGACACTCTCCA+TGG + chr4_3:13825827-13825846 Msa0631180:intron 45.0%
CTGGGTACAATAGGAAACAG+AGG - chr4_3:13825860-13825879 None:intergenic 45.0%
GGAGTTAGGAGGTGAAGAAA+AGG + chr4_3:13825994-13826013 Msa0631180:intron 45.0%
TTAGGAGGTGAAGAAAAGGG+AGG + chr4_3:13825998-13826017 Msa0631180:intron 45.0%
TAGGAGGTGAAGAAAAGGGA+GGG + chr4_3:13825999-13826018 Msa0631180:intron 45.0%
!! GGTGATCCCTCGCTTTATTT+GGG + chr4_3:13826040-13826059 Msa0631180:intron 45.0%
!!! TGGGATTGTTTTTAGAGGGG+AGG + chr4_3:13826059-13826078 Msa0631180:intron 45.0%
!!! GGGATTGTTTTTAGAGGGGA+GGG + chr4_3:13826060-13826079 Msa0631180:intron 45.0%
!!! TTGTTTTTAGAGGGGAGGGA+AGG + chr4_3:13826064-13826083 Msa0631180:intron 45.0%
! TTTGAGTTCCCCCAAATTGG+AGG + chr4_3:13826203-13826222 Msa0631180:intron 45.0%
TTGAGTTCCCCCAAATTGGA+GGG + chr4_3:13826204-13826223 Msa0631180:intron 45.0%
ACCAGAAACCCTCCAATTTG+GGG - chr4_3:13826215-13826234 None:intergenic 45.0%
CACCAGAAACCCTCCAATTT+GGG - chr4_3:13826216-13826235 None:intergenic 45.0%
ACACCAGAAACCCTCCAATT+TGG - chr4_3:13826217-13826236 None:intergenic 45.0%
ATAAAACCCCATGCCAAGTG+GGG + chr4_3:13826254-13826273 Msa0631180:intron 45.0%
! GTACCTGTGCTTGCAAGTTT+TGG + chr4_3:13826447-13826466 Msa0631180:intron 45.0%
CGTGTCCCATTTGTTCTTCA+TGG + chr4_3:13826884-13826903 Msa0631180:intron 45.0%
CACACCCCATGAAGAACAAA+TGG - chr4_3:13826893-13826912 None:intergenic 45.0%
TTCATGGGGTGTGATCTTCA+AGG + chr4_3:13826900-13826919 Msa0631180:intron 45.0%
!! GTTTTTCAGATGAGGAGGAC+CGG + chr4_3:13827059-13827078 Msa0631180:intron 45.0%
CATGAGCAGCAACTATGATC+CGG - chr4_3:13827081-13827100 None:intergenic 45.0%
!! GCTACTGGCTTAAAAAGGGT+CGG - chr4_3:13827433-13827452 None:intergenic 45.0%
!! CACGTGCTACTGGCTTAAAA+AGG - chr4_3:13827438-13827457 None:intergenic 45.0%
! AAAGCACTTACACGTGCTAC+TGG - chr4_3:13827448-13827467 None:intergenic 45.0%
ATAGGTCCTTGCATTGGAAC+AGG - chr4_3:13827523-13827542 None:intergenic 45.0%
!! CACACTGATTAGGCACTGAT+CGG - chr4_3:13827606-13827625 None:intergenic 45.0%
! CATCCATGACCACACTGATT+AGG - chr4_3:13827616-13827635 None:intergenic 45.0%
! TGGTCCCAACAAAGAGCTTT+TGG - chr4_3:13827662-13827681 None:intergenic 45.0%
GAACAGCAGCGTCAAAATGA+TGG + chr4_3:13827783-13827802 Msa0631180:CDS 45.0%
CAAATCTTAATGGGACCGGA+TGG + chr4_3:13827883-13827902 Msa0631180:three_prime_UTR 45.0%
!! ATTAATTAATGAAAAAAATA+AGG - chr4_3:13825751-13825770 None:intergenic 5.0%
GACGAAGGTTTAGCCGCATT+AGG + chr4_3:13822287-13822306 Msa0631180:CDS 50.0%
CTGAGAATGGCGTCTTCTTC+AGG - chr4_3:13822362-13822381 None:intergenic 50.0%
! CGTGGGATTTCTGGAAGATC+GGG + chr4_3:13822428-13822447 Msa0631180:CDS 50.0%
! GTGGGATTTCTGGAAGATCG+GGG + chr4_3:13822429-13822448 Msa0631180:CDS 50.0%
GAATGGTTGCGTGTGCATTG+AGG + chr4_3:13822787-13822806 Msa0631180:intron 50.0%
ATGTGGTGAAATGTGGCTGG+TGG + chr4_3:13822963-13822982 Msa0631180:intron 50.0%
TGTGGTGAAATGTGGCTGGT+GGG + chr4_3:13822964-13822983 Msa0631180:intron 50.0%
! GTGGTCAAATGTGGCTTGTG+TGG + chr4_3:13823244-13823263 Msa0631180:intron 50.0%
AGACTTCGAATCGTCCCACA+TGG + chr4_3:13823984-13824003 Msa0631180:intron 50.0%
GAATCGTCCCACATGGTTGA+AGG + chr4_3:13823991-13824010 Msa0631180:intron 50.0%
TCTGCCCATTGTACTTCTCC+CGG + chr4_3:13824962-13824981 Msa0631180:intron 50.0%
! CCAACCGGGAGAAGTACAAT+GGG - chr4_3:13824969-13824988 None:intergenic 50.0%
CCATTGTACTTCTCCCGGTT+GGG + chr4_3:13824967-13824986 Msa0631180:intron 50.0%
TGTGTAAGGCAAGGGGAAGA+GGG - chr4_3:13825124-13825143 None:intergenic 50.0%
ATGTGTAAGGCAAGGGGAAG+AGG - chr4_3:13825125-13825144 None:intergenic 50.0%
! TGGGGTATTCGAGGATTGAC+AGG - chr4_3:13825267-13825286 None:intergenic 50.0%
TGTCAATCCTCGAATACCCC+AGG + chr4_3:13825266-13825285 Msa0631180:intron 50.0%
!! TTGAGTTTGCAAGCACCGAG+AGG - chr4_3:13825484-13825503 None:intergenic 50.0%
AGGGCAGCAATTTGATGGGA+TGG - chr4_3:13825569-13825588 None:intergenic 50.0%
GAAACAGAGGACAGAAGCCA+TGG - chr4_3:13825847-13825866 None:intergenic 50.0%
AGGAGGTGAAGAAAAGGGAG+GGG + chr4_3:13826000-13826019 Msa0631180:intron 50.0%
! GGGTGATCCCTCGCTTTATT+TGG + chr4_3:13826039-13826058 Msa0631180:intron 50.0%
CCAGAAACCCTCCAATTTGG+GGG - chr4_3:13826214-13826233 None:intergenic 50.0%
ATAGTTCCCCACTTGGCATG+GGG - chr4_3:13826263-13826282 None:intergenic 50.0%
GATAGTTCCCCACTTGGCAT+GGG - chr4_3:13826264-13826283 None:intergenic 50.0%
AGGGGAAAGAGAAAGGGAAG+GGG - chr4_3:13826288-13826307 None:intergenic 50.0%
GAGGGGAAAGAGAAAGGGAA+GGG - chr4_3:13826289-13826308 None:intergenic 50.0%
AGAGGGGAAAGAGAAAGGGA+AGG - chr4_3:13826290-13826309 None:intergenic 50.0%
ACAGTTCACCCCTCTCAAGA+TGG + chr4_3:13826425-13826444 Msa0631180:intron 50.0%
CACAGGTACCATCTTGAGAG+GGG - chr4_3:13826436-13826455 None:intergenic 50.0%
GCACAGGTACCATCTTGAGA+GGG - chr4_3:13826437-13826456 None:intergenic 50.0%
AGCACAGGTACCATCTTGAG+AGG - chr4_3:13826438-13826457 None:intergenic 50.0%
TGCCCAAAACTTGCAAGCAC+AGG - chr4_3:13826453-13826472 None:intergenic 50.0%
GTTGCTGCTCATGCAATCCA+TGG + chr4_3:13827088-13827107 Msa0631180:CDS 50.0%
TGGCTGCCCATTTGTTTCCA+TGG - chr4_3:13827108-13827127 None:intergenic 50.0%
ACAAATGGGCAGCCATTGCT+AGG + chr4_3:13827113-13827132 Msa0631180:CDS 50.0%
CATGGGGGGAAATATCAGCT+TGG + chr4_3:13827246-13827265 Msa0631180:CDS 50.0%
! ACTGGCTTAAAAAGGGTCGG+TGG - chr4_3:13827430-13827449 None:intergenic 50.0%
TGGAGCTGATGTTGAAGGCT+GGG - chr4_3:13827497-13827516 None:intergenic 50.0%
TTGGAGCTGATGTTGAAGGC+TGG - chr4_3:13827498-13827517 None:intergenic 50.0%
GGTCTTGGAGCTGATGTTGA+AGG - chr4_3:13827502-13827521 None:intergenic 50.0%
CCTTGCATTGGAACAGGTCT+TGG - chr4_3:13827517-13827536 None:intergenic 50.0%
CCAAGACCTGTTCCAATGCA+AGG + chr4_3:13827514-13827533 Msa0631180:CDS 50.0%
CGATCAGTGCCTAATCAGTG+TGG + chr4_3:13827604-13827623 Msa0631180:CDS 50.0%
GTGCCTAATCAGTGTGGTCA+TGG + chr4_3:13827610-13827629 Msa0631180:CDS 50.0%
CATGGATGCTGCTCATCTCT+TGG + chr4_3:13827628-13827647 Msa0631180:CDS 50.0%
ACAACCACCAACTCTCACGG+CGG + chr4_3:13822247-13822266 Msa0631180:CDS 55.0%
GGTTTAGCCGCATTAGGCGA+AGG + chr4_3:13822293-13822312 Msa0631180:CDS 55.0%
TTAGCCGCATTAGGCGAAGG+CGG + chr4_3:13822296-13822315 Msa0631180:CDS 55.0%
TTCACCGCCTTCGCCTAATG+CGG - chr4_3:13822303-13822322 None:intergenic 55.0%
GAAGGCGGTGAAGGAAGTAG+CGG + chr4_3:13822311-13822330 Msa0631180:CDS 55.0%
GCGTCTTCTTCAGGAGACCA+AGG - chr4_3:13822353-13822372 None:intergenic 55.0%
GCTGATTACACCATCGGAGC+CGG - chr4_3:13822463-13822482 None:intergenic 55.0%
! CGAGTTCGGGTTCTCCTGAA+TGG + chr4_3:13822589-13822608 Msa0631180:intron 55.0%
TGGTTGTGATCGCATGGTCG+TGG + chr4_3:13822937-13822956 Msa0631180:intron 55.0%
TCGCATGGTCGTGGTCAATG+TGG + chr4_3:13822946-13822965 Msa0631180:intron 55.0%
GTGGTGAAATGTGGCTGGTG+GGG + chr4_3:13822965-13822984 Msa0631180:intron 55.0%
GTGGTCAAATGTGGCTGGTG+TGG + chr4_3:13823131-13823150 Msa0631180:intron 55.0%
! GTGGCTTGTGTGGCCTCAAT+TGG + chr4_3:13823254-13823273 Msa0631180:intron 55.0%
! CACACCCAACTTTTCCGGAG+TGG - chr4_3:13823873-13823892 None:intergenic 55.0%
TATCCGGCTAACTGTCCGTC+CGG + chr4_3:13824842-13824861 Msa0631180:intron 55.0%
CCCATTGTACTTCTCCCGGT+TGG + chr4_3:13824966-13824985 Msa0631180:intron 55.0%
! CCCAACCGGGAGAAGTACAA+TGG - chr4_3:13824970-13824989 None:intergenic 55.0%
! AGCAACTCCTGGGGTATTCG+AGG - chr4_3:13825276-13825295 None:intergenic 55.0%
ATCCAGAGGAGCAACTCCTG+GGG - chr4_3:13825285-13825304 None:intergenic 55.0%
GATCCAGAGGAGCAACTCCT+GGG - chr4_3:13825286-13825305 None:intergenic 55.0%
AGATCCAGAGGAGCAACTCC+TGG - chr4_3:13825287-13825306 None:intergenic 55.0%
CCAGTGCACTGCTTACCTCT+CGG + chr4_3:13825466-13825485 Msa0631180:intron 55.0%
AGGTGAAGAAAAGGGAGGGG+AGG + chr4_3:13826003-13826022 Msa0631180:intron 55.0%
GGTGAAGAAAAGGGAGGGGA+GGG + chr4_3:13826004-13826023 Msa0631180:intron 55.0%
GTGAAGAAAAGGGAGGGGAG+GGG + chr4_3:13826005-13826024 Msa0631180:intron 55.0%
CCCCCAAATTGGAGGGTTTC+TGG + chr4_3:13826211-13826230 Msa0631180:intron 55.0%
GGATAGTTCCCCACTTGGCA+TGG - chr4_3:13826265-13826284 None:intergenic 55.0%
GGGAAAGAGAAAGGGAAGGG+GGG - chr4_3:13826286-13826305 None:intergenic 55.0%
GGGGAAAGAGAAAGGGAAGG+GGG - chr4_3:13826287-13826306 None:intergenic 55.0%
TCCTGGCAGAAGCCTAGCAA+TGG - chr4_3:13827128-13827147 None:intergenic 55.0%
TCGGTGGATCCCTGACTTCA+TGG - chr4_3:13827414-13827433 None:intergenic 55.0%
! TGATGGGTGATACTGCTGGC+AGG + chr4_3:13827800-13827819 Msa0631180:CDS 55.0%
GATGGGTGATACTGCTGGCA+GGG + chr4_3:13827801-13827820 Msa0631180:CDS 55.0%
GCATTAGGCGAAGGCGGTGA+AGG + chr4_3:13822302-13822321 Msa0631180:CDS 60.0%
GAAGATCGGGGAAGTCGTGC+CGG + chr4_3:13822441-13822460 Msa0631180:CDS 60.0%
GTTGCGGTTCATGGCCGTTC+CGG + chr4_3:13823411-13823430 Msa0631180:intron 60.0%
GAACCGGACGGACAGTTAGC+CGG - chr4_3:13824848-13824867 None:intergenic 60.0%
TCGGCTCCCATCCAATGCAC+AGG - chr4_3:13825075-13825094 None:intergenic 60.0%
TACCCCAGGAGTTGCTCCTC+TGG + chr4_3:13825280-13825299 Msa0631180:intron 60.0%
CCGAGAGGTAAGCAGTGCAC+TGG - chr4_3:13825469-13825488 None:intergenic 60.0%
AAGAAAAGGGAGGGGAGGGG+AGG + chr4_3:13826008-13826027 Msa0631180:intron 60.0%
AGAAAAGGGAGGGGAGGGGA+GGG + chr4_3:13826009-13826028 Msa0631180:intron 60.0%
AGGGGGGATAGTTCCCCACT+TGG - chr4_3:13826270-13826289 None:intergenic 60.0%
GCCATTGCTAGGCTTCTGCC+AGG + chr4_3:13827124-13827143 Msa0631180:CDS 60.0%
!! CTGAGGCGTCGAGGAATTGG+GGG + chr4_3:13827187-13827206 Msa0631180:CDS 60.0%
TGCACCGCCGTGAGAGTTGG+TGG - chr4_3:13822254-13822273 None:intergenic 65.0%
TCGTGCACCGCCGTGAGAGT+TGG - chr4_3:13822257-13822276 None:intergenic 65.0%
ACTCTCACGGCGGTGCACGA+CGG + chr4_3:13822257-13822276 Msa0631180:CDS 65.0%
GTGGCTGGTGGGGCCTCATT+TGG + chr4_3:13822975-13822994 Msa0631180:intron 65.0%
ACGGCGGTGCACGACGGAAG+CGG + chr4_3:13822263-13822282 Msa0631180:CDS 70.0%
CACGACGGAAGCGGCGACGA+AGG + chr4_3:13822272-13822291 Msa0631180:CDS 70.0%
!! GGAAGTCGTGCCGGCTCCGA+TGG + chr4_3:13822450-13822469 Msa0631180:CDS 70.0%
AGGGAGGGGAGGGGAGGGAA+AGG + chr4_3:13826014-13826033 Msa0631180:intron 70.0%
GGGAGGGGAGGGGAGGGAAA+GGG + chr4_3:13826015-13826034 Msa0631180:intron 70.0%
AGGGGAGGGGAGGGAAAGGG+AGG + chr4_3:13826018-13826037 Msa0631180:intron 70.0%
GGGGAGGGGAGGGAAAGGGA+GGG + chr4_3:13826019-13826038 Msa0631180:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 13822187 13828069 13822187 ID=Msa0631180;Name=Msa0631180
chr4_3 mRNA 13822187 13828069 13822187 ID=Msa0631180-mRNA-1;Parent=Msa0631180;Name=Msa0631180-mRNA-1;_AED=0.06;_eAED=0.06;_QI=43|1|1|1|1|1|2|235|350
chr4_3 exon 13822187 13822515 13822187 ID=Msa0631180-mRNA-1:exon:3871;Parent=Msa0631180-mRNA-1
chr4_3 exon 13827068 13828069 13827068 ID=Msa0631180-mRNA-1:exon:3872;Parent=Msa0631180-mRNA-1
chr4_3 five_prime_UTR 13822187 13822229 13822187 ID=Msa0631180-mRNA-1:five_prime_utr;Parent=Msa0631180-mRNA-1
chr4_3 CDS 13822230 13822515 13822230 ID=Msa0631180-mRNA-1:cds;Parent=Msa0631180-mRNA-1
chr4_3 CDS 13827068 13827834 13827068 ID=Msa0631180-mRNA-1:cds;Parent=Msa0631180-mRNA-1
chr4_3 three_prime_UTR 13827835 13828069 13827835 ID=Msa0631180-mRNA-1:three_prime_utr;Parent=Msa0631180-mRNA-1
Gene Sequence

>Msa0631180

ATGGAACCAGAACAACAACAACCACCAACTCTCACGGCGGTGCACGACGGAAGCGGCGACGAAGGTTTAGCCGCATTAGGCGAAGGCGGTGAAGGAAGTAGCGGTAGCAAAGTGAAAGGACCTTGGTCTCCTGAAGAAGACGCCATTCTCAGTCGTCTTGTTAGTCAGTTCGGTGCTAGAAATTGGAGTTTGATTGCTCGTGGGATTTCTGGAAGATCGGGGAAGTCGTGCCGGCTCCGATGGTGTAATCAGCTTGATCCTTCTGTTAAACGGAAACCCTTCACTGATGAGGAGGACCGGATCATAGTTGCTGCTCATGCAATCCATGGAAACAAATGGGCAGCCATTGCTAGGCTTCTGCCAGGAAGAACAGATAATGCCATTAAGAACCACTGGAATTCTACTCTGAGGCGTCGAGGAATTGGGGGAGTTGAACATGATAATACTAAGTTAGAATCTAGTAACATGGGGGGAAATATCAGCTTGGAGAAAGCCAAAGCATCATCTGAAGAAACTCTATCATGTGGAGATGTTAATTCTTTGAAATCCTCAGAAGGAAGAGATGTTAGTTCTATGGAGATTGTGGATGATAAAAATGAAGACAAAGCAAGGACTGATGTTCAATTATACCATGAAGTCAGGGATCCACCGACCCTTTTTAAGCCAGTAGCACGTGTAAGTGCTTTTAATGCGTATAACGCTTTCAATGGTTCCCAGCCTTCAACATCAGCTCCAAGACCTGTTCCAATGCAAGGACCTATTTTACATTCACCAAAATCAGATGCGGAAATTTGTAAAATGCTTAACAGAACTATTGTCGACCGATCAGTGCCTAATCAGTGTGGTCATGGATGCTGCTCATCTCTTGGTAACAACTCCAAAAGCTCTTTGTTGGGACCAGACTTCATTGAATATTCAGAACCTCAATCTTTCACAAGTTTTGAGTTGGCTGCAATAGCTACAGACATTAGTAACCTTGCTTGGCTTAAAAGTGGATTGGAGAACAGCAGCGTCAAAATGATGGGTGATACTGCTGGCAGGGTTAATATCTAA
Protein sequence

>Msa0631180

MEPEQQQPPTLTAVHDGSGDEGLAALGEGGEGSSGSKVKGPWSPEEDAILSRLVSQFGARNWSLIARGISGRSGKSCRLRWCNQLDPSVKRKPFTDEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGIGGVEHDNTKLESSNMGGNISLEKAKASSEETLSCGDVNSLKSSEGRDVSSMEIVDDKNEDKARTDVQLYHEVRDPPTLFKPVARVSAFNAYNAFNGSQPSTSAPRPVPMQGPILHSPKSDAEICKMLNRTIVDRSVPNQCGHGCCSSLGNNSKSSLLGPDFIEYSEPQSFTSFELAAIATDISNLAWLKSGLENSSVKMMGDTAGRVNI*