Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275080 | XP_013462736.1 | 80.597 | 335 | 52 | 5 | 1 | 331 | 169 | 494 | 2.16e-93 | 296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275080 | sp|Q9M8K5|HIP32_ARATH | 50.413 | 121 | 37 | 4 | 226 | 331 | 361 | 473 | 2.75e-13 | 73.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275080 | A0A072V529 | 80.597 | 335 | 52 | 5 | 1 | 331 | 169 | 494 | 1.03e-93 | 296 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0275080 | 0.815135 | 1.079554e-51 | -8.615850e-47 |
| Msa0032920 | Msa0275080 | -0.808186 | 3.505093e-50 | -8.615850e-47 |
| Msa0081520 | Msa0275080 | 0.805977 | 1.028884e-49 | -8.615850e-47 |
| Msa0125540 | Msa0275080 | 0.800108 | 1.682387e-48 | -8.615850e-47 |
| Msa0125660 | Msa0275080 | 0.802044 | 6.762855e-49 | -8.615850e-47 |
| Msa0140820 | Msa0275080 | 0.828499 | 8.689162e-55 | -8.615850e-47 |
| Msa0140850 | Msa0275080 | 0.822343 | 2.492408e-53 | -8.615850e-47 |
| Msa0172900 | Msa0275080 | 0.800353 | 1.499521e-48 | -8.615850e-47 |
| Msa0188780 | Msa0275080 | 0.822348 | 2.485406e-53 | -8.615850e-47 |
| Msa0196190 | Msa0275080 | 0.876016 | 1.951521e-68 | -8.615850e-47 |
| Msa0230490 | Msa0275080 | 0.830286 | 3.199816e-55 | -8.615850e-47 |
| Msa0238090 | Msa0275080 | 0.913986 | 3.254868e-84 | -8.615850e-47 |
| Msa0270120 | Msa0275080 | 0.840878 | 6.668711e-58 | -8.615850e-47 |
| Msa0275070 | Msa0275080 | 0.800476 | 1.415955e-48 | -8.615850e-47 |
| Msa0275080 | Msa0307850 | 0.804017 | 2.642816e-49 | -8.615850e-47 |
| Msa0275080 | Msa0315980 | 0.951319 | 2.626442e-109 | -8.615850e-47 |
| Msa0275080 | Msa0369450 | 0.827444 | 1.559109e-54 | -8.615850e-47 |
| Msa0275080 | Msa0375640 | 0.801007 | 1.103155e-48 | -8.615850e-47 |
| Msa0275080 | Msa0405710 | 0.814644 | 1.387287e-51 | -8.615850e-47 |
| Msa0275080 | Msa0424160 | 0.813465 | 2.525445e-51 | -8.615850e-47 |
| Msa0275080 | Msa0425410 | 0.815203 | 1.042647e-51 | -8.615850e-47 |
| Msa0275080 | Msa0427150 | 0.825625 | 4.232026e-54 | -8.615850e-47 |
| Msa0275080 | Msa0498670 | 0.803001 | 4.293351e-49 | -8.615850e-47 |
| Msa0275080 | Msa0524500 | 0.801025 | 1.093961e-48 | -8.615850e-47 |
| Msa0275080 | Msa0526420 | 0.810048 | 1.399071e-50 | -8.615850e-47 |
| Msa0275080 | Msa0581110 | 0.802396 | 5.722084e-49 | -8.615850e-47 |
| Msa0275080 | Msa0588360 | 0.814098 | 1.831129e-51 | -8.615850e-47 |
| Msa0275080 | Msa0591170 | 0.807901 | 4.030851e-50 | -8.615850e-47 |
| Msa0275080 | Msa0631170 | 0.835567 | 1.556664e-56 | -8.615850e-47 |
| Msa0275080 | Msa0631180 | 0.814489 | 1.501007e-51 | -8.615850e-47 |
| Msa0275080 | Msa0669520 | 0.834531 | 2.839731e-56 | -8.615850e-47 |
| Msa0275080 | Msa0698780 | 0.801459 | 8.914082e-49 | -8.615850e-47 |
| Msa0275080 | Msa0725440 | 0.812307 | 4.527361e-51 | -8.615850e-47 |
| Msa0275080 | Msa0738040 | 0.802446 | 5.590122e-49 | -8.615850e-47 |
| Msa0275080 | Msa0808800 | 0.822444 | 2.361378e-53 | -8.615850e-47 |
| Msa0275080 | Msa1074370 | 0.812632 | 3.844890e-51 | -8.615850e-47 |
| Msa0275080 | Msa1085930 | 0.811554 | 6.605576e-51 | -8.615850e-47 |
| Msa0275080 | Msa1119070 | 0.803274 | 3.769531e-49 | -8.615850e-47 |
| Msa0275080 | Msa1124110 | 0.801252 | 9.828617e-49 | -8.615850e-47 |
| Msa0275080 | Msa1126830 | 0.802012 | 6.864406e-49 | -8.615850e-47 |
| Msa0275080 | Msa1165940 | 0.807679 | 4.493621e-50 | -8.615850e-47 |
| Msa0275080 | Msa1197600 | 0.805842 | 1.097924e-49 | -8.615850e-47 |
| Msa0275080 | Msa1205490 | 0.803234 | 3.842349e-49 | -8.615850e-47 |
| Msa0275080 | Msa1216110 | 0.820547 | 6.476186e-53 | -8.615850e-47 |
| Msa0275080 | Msa1216340 | 0.815829 | 7.564888e-52 | -8.615850e-47 |
| Msa0275080 | Msa1216360 | 0.879344 | 1.345267e-69 | -8.615850e-47 |
| Msa0275080 | Msa1263010 | 0.849209 | 3.745908e-60 | -8.615850e-47 |
| Msa0275080 | Msa1349690 | 0.808977 | 2.375275e-50 | -8.615850e-47 |
| Msa0275080 | Msa1357350 | 0.824721 | 6.923147e-54 | -8.615850e-47 |
| Msa0275080 | Msa1358290 | 0.804386 | 2.214371e-49 | -8.615850e-47 |
| Msa0275080 | Msa1392740 | 0.812418 | 4.281927e-51 | -8.615850e-47 |
| Msa0275080 | Msa1429930 | 0.831840 | 1.328916e-55 | -8.615850e-47 |
| Msa0275080 | Msa1437940 | 0.803505 | 3.375749e-49 | -8.615850e-47 |
| Msa0275080 | Msa1446810 | 0.807164 | 5.777161e-50 | -8.615850e-47 |
| Msa0275080 | Msa1449930 | 0.822129 | 2.794026e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275080 | MtrunA17_Chr2g0287751 | 80.597 | 335 | 52 | 5 | 1 | 331 | 169 | 494 | 1.99e-97 | 296 |
| Msa0275080 | MtrunA17_Chr2g0287741 | 71.940 | 335 | 73 | 7 | 1 | 331 | 166 | 483 | 3.76e-78 | 249 |
| Msa0275080 | MtrunA17_Chr0c22g0493871 | 53.125 | 128 | 35 | 4 | 217 | 331 | 15 | 130 | 1.76e-12 | 63.9 |
| Msa0275080 | MtrunA17_Chr4g0065611 | 53.125 | 128 | 35 | 4 | 217 | 331 | 27 | 142 | 1.97e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275080 | AT3G06130.1 | 50.413 | 121 | 37 | 4 | 226 | 331 | 361 | 473 | 2.80e-14 | 73.9 |
| Msa0275080 | AT5G19090.2 | 47.222 | 144 | 41 | 5 | 220 | 331 | 325 | 465 | 2.37e-13 | 70.9 |
| Msa0275080 | AT5G19090.3 | 47.222 | 144 | 41 | 5 | 220 | 331 | 325 | 465 | 2.37e-13 | 70.9 |
Find 130 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCACCCATCATCATTTC+AGG | 0.251317 | 2_3:+7022320 | None:intergenic |
| CCTGTGCCTGTTCAAGTTCA+TGG | 0.322029 | 2_3:-7022797 | Msa0275080:CDS |
| CATGGCTTGGGTGGTGGAAA+TGG | 0.328082 | 2_3:-7022779 | Msa0275080:CDS |
| ATGTATTGTTGTTGTTGGTA+TGG | 0.358729 | 2_3:+7022296 | None:intergenic |
| CCCATTGCTCCTCCTCCCAT+TGG | 0.369706 | 2_3:+7022458 | None:intergenic |
| GTTGGTGGAGGTGGTGGTAA+TGG | 0.372485 | 2_3:-7022626 | Msa0275080:CDS |
| AAAGGTGGTGGCGGTGGCGG+TGG | 0.381550 | 2_3:-7022743 | Msa0275080:CDS |
| GGATGACCACCACCCATGTT+TGG | 0.385549 | 2_3:+7022521 | None:intergenic |
| GCCTGTTCAAGTTCATGGCT+TGG | 0.385983 | 2_3:-7022792 | Msa0275080:CDS |
| GGCGGTGTCAGTGGTGGATA+TGG | 0.391475 | 2_3:-7022347 | Msa0275080:CDS |
| GCCGGTAGGCCTTGAACAGC+TGG | 0.391650 | 2_3:+7022395 | None:intergenic |
| GGTGGAGGTGGTGGTAATGG+TGG | 0.396018 | 2_3:-7022623 | Msa0275080:CDS |
| AAGAAAGGTGGTGGCGGTGG+CGG | 0.406323 | 2_3:-7022746 | Msa0275080:CDS |
| GTTCAAGGTATGATGAATAA+TGG | 0.407885 | 2_3:-7022548 | Msa0275080:CDS |
| GGTGGTGGCGGCAGTGGTGG+AGG | 0.409161 | 2_3:-7022821 | Msa0275080:CDS |
| CCTCCCATTTGACTCATCAT+TGG | 0.414296 | 2_3:+7022425 | None:intergenic |
| CGGCCATGTATTGTTGTTGT+TGG | 0.415164 | 2_3:+7022291 | None:intergenic |
| AAGAAAGGTGGTGGCGGCAG+TGG | 0.415819 | 2_3:-7022827 | Msa0275080:CDS |
| GAAACCATGTGGCCCACATT+AGG | 0.418420 | 2_3:+7022500 | None:intergenic |
| CATGATGATGAATGCTCAAA+AGG | 0.426250 | 2_3:-7022876 | Msa0275080:CDS |
| CCCAAGCCATGAACTTGAAC+AGG | 0.428896 | 2_3:+7022791 | None:intergenic |
| TGTATTGTTGTTGTTGGTAT+GGG | 0.429195 | 2_3:+7022297 | None:intergenic |
| AAAGGTGGTGGCGGCAGTGG+TGG | 0.433138 | 2_3:-7022824 | Msa0275080:CDS |
| AATAAGAATGTTGGTGGAGG+TGG | 0.436250 | 2_3:-7022635 | Msa0275080:CDS |
| CCTGTTCAAGTTCATGGCTT+GGG | 0.438192 | 2_3:-7022791 | Msa0275080:CDS |
| ATGGCTTGGGTGGTGGAAAT+GGG | 0.442661 | 2_3:-7022778 | Msa0275080:CDS |
| GAATAAGATGAAACTACCTA+TGG | 0.442921 | 2_3:-7022918 | Msa0275080:CDS |
| GGAAAGAAAGGTGGTGGCGG+TGG | 0.448783 | 2_3:-7022749 | Msa0275080:CDS |
| ATGGGAGAAAGTGGTGTTCA+AGG | 0.452988 | 2_3:-7022563 | Msa0275080:CDS |
| GCTCAAAAGGGTGTTGGAAA+TGG | 0.456364 | 2_3:-7022863 | Msa0275080:CDS |
| GGTGGAGGAGGGTAGCTATA+CGG | 0.456831 | 2_3:+7022164 | None:intergenic |
| GTGGGATTCCAAATAACAAT+GGG | 0.461498 | 2_3:-7022604 | Msa0275080:CDS |
| GGTGGTCTTGCGTAAATCAT+TGG | 0.463489 | 2_3:+7022215 | None:intergenic |
| TGAGGATGTTGAGGTGGAGG+AGG | 0.468950 | 2_3:+7022152 | None:intergenic |
| GCGATGAACGGCGGTGGAGG+AGG | 0.468951 | 2_3:-7022368 | Msa0275080:CDS |
| GTGGAGGTGGTGGTAATGGT+GGG | 0.469948 | 2_3:-7022622 | Msa0275080:CDS |
| GTTGGAAATGGCGGAGGCAA+TGG | 0.471383 | 2_3:-7022851 | Msa0275080:CDS |
| CATGCCAATGATGAGTCAAA+TGG | 0.477210 | 2_3:-7022429 | Msa0275080:CDS |
| GCTGCGATGAACGGCGGTGG+AGG | 0.477384 | 2_3:-7022371 | Msa0275080:CDS |
| GGGTGGTGGTCATCCTAATG+TGG | 0.482164 | 2_3:-7022513 | Msa0275080:CDS |
| GGAGGAGGCGGTGTCAGTGG+TGG | 0.483447 | 2_3:-7022353 | Msa0275080:CDS |
| GGTAACATGCCAGCTGTTCA+AGG | 0.483877 | 2_3:-7022404 | Msa0275080:CDS |
| ATGAACGGCGGTGGAGGAGG+CGG | 0.489060 | 2_3:-7022365 | Msa0275080:CDS |
| CAAGTTCATGGCTTGGGTGG+TGG | 0.495665 | 2_3:-7022785 | Msa0275080:CDS |
| AATCTATCATTTCCACCGGC+TGG | 0.497223 | 2_3:+7022242 | None:intergenic |
| AAGAATGTTGGTGGAGGTGG+TGG | 0.497263 | 2_3:-7022632 | Msa0275080:CDS |
| GCCAGCTGTTCAAGGCCTAC+CGG | 0.501295 | 2_3:-7022396 | Msa0275080:CDS |
| CCAATGGGAGGAGGAGCAAT+GGG | 0.508430 | 2_3:-7022458 | Msa0275080:CDS |
| TCTTGAGGATGTTGAGGTGG+AGG | 0.508997 | 2_3:+7022149 | None:intergenic |
| GGTAGTTTCATCTTATTCAA+AGG | 0.515445 | 2_3:+7022923 | None:intergenic |
| GCAGCTGCGATGAACGGCGG+TGG | 0.515631 | 2_3:-7022374 | Msa0275080:CDS |
| AATGGGAATGGAGGAAAGAA+AGG | 0.515830 | 2_3:-7022761 | Msa0275080:CDS |
| CGCAATGATGAATCAACAAA+GGG | 0.517484 | 2_3:-7022270 | Msa0275080:CDS |
| CCGCCGTTCATCGCAGCTGC+CGG | 0.518191 | 2_3:+7022377 | None:intergenic |
| CAATATGAATGGTATGCCAA+TGG | 0.523524 | 2_3:-7022474 | Msa0275080:CDS |
| ATGGTTTCTAACAATATGAA+TGG | 0.524254 | 2_3:-7022485 | Msa0275080:CDS |
| ATGCCAATGATGAGTCAAAT+GGG | 0.525603 | 2_3:-7022428 | Msa0275080:CDS |
| GATTTACGCAAGACCACCAA+TGG | 0.525992 | 2_3:-7022210 | Msa0275080:CDS |
| CTACCGGCAGCTGCGATGAA+CGG | 0.526265 | 2_3:-7022380 | Msa0275080:CDS |
| GGCGGAGGCAATGGAAAGAA+AGG | 0.528122 | 2_3:-7022842 | Msa0275080:CDS |
| ATGAATGCTCAAAAGGGTGT+TGG | 0.528773 | 2_3:-7022869 | Msa0275080:CDS |
| GAGGATGTTGAGGTGGAGGA+GGG | 0.529310 | 2_3:+7022153 | None:intergenic |
| GGAGGAAAGAAAGGTGGTGG+CGG | 0.534225 | 2_3:-7022752 | Msa0275080:CDS |
| GTAAATGGGATGGGAGAAAG+TGG | 0.537153 | 2_3:-7022572 | Msa0275080:CDS |
| CGTTCATCGCAGCTGCCGGT+AGG | 0.538577 | 2_3:+7022381 | None:intergenic |
| TTGAAATCTATCATTTCCAC+CGG | 0.540400 | 2_3:+7022238 | None:intergenic |
| GGTGGAGGAGGCGGTGTCAG+TGG | 0.540462 | 2_3:-7022356 | Msa0275080:CDS |
| GCCAATGGGAGGAGGAGCAA+TGG | 0.540634 | 2_3:-7022459 | Msa0275080:CDS |
| AATAAGATGAAACTACCTAT+GGG | 0.540693 | 2_3:-7022917 | Msa0275080:CDS |
| TGGTGGTCCTGAAATGATGA+TGG | 0.543773 | 2_3:-7022327 | Msa0275080:CDS |
| TCATCCTAATGTGGGCCACA+TGG | 0.547730 | 2_3:-7022504 | Msa0275080:CDS |
| AATATGAATGGTATGCCAAT+GGG | 0.548285 | 2_3:-7022473 | Msa0275080:CDS |
| TACATGTAATTAACACCCAT+TGG | 0.549609 | 2_3:+7022194 | None:intergenic |
| GCATTCATCATCATGTGAGC+AGG | 0.550437 | 2_3:+7022884 | None:intergenic |
| AATGGGAATAAGAATGTTGG+TGG | 0.551727 | 2_3:-7022641 | Msa0275080:CDS |
| CTCATCATCAAACTCCTCAT+CGG | 0.556584 | 2_3:+7022955 | None:intergenic |
| CAACAAAGGGCAATACCAGC+CGG | 0.559250 | 2_3:-7022257 | Msa0275080:CDS |
| TTGGGTGGTGGAAATGGGAA+TGG | 0.566802 | 2_3:-7022773 | Msa0275080:CDS |
| AAGTTGGAGTATGGATCTTG+AGG | 0.572375 | 2_3:+7022134 | None:intergenic |
| GGTGGTGGTCATCCTAATGT+GGG | 0.574953 | 2_3:-7022512 | Msa0275080:CDS |
| AATGGTATGCCAATGGGAGG+AGG | 0.574960 | 2_3:-7022467 | Msa0275080:CDS |
| GGCAATGGAAAGAAAGGTGG+TGG | 0.576650 | 2_3:-7022836 | Msa0275080:CDS |
| AATGGAGGAAAGAAAGGTGG+TGG | 0.577240 | 2_3:-7022755 | Msa0275080:CDS |
| AATAATCAGAGTCAGAATCA+AGG | 0.578254 | 2_3:-7022719 | Msa0275080:CDS |
| TAAGATGAAACTACCTATGG+GGG | 0.588463 | 2_3:-7022915 | Msa0275080:CDS |
| GGAGGGTAGCTATACGGCGG+AGG | 0.592003 | 2_3:+7022170 | None:intergenic |
| ATACCAACAACAACAATACA+TGG | 0.592297 | 2_3:-7022294 | Msa0275080:CDS |
| CCATGAACTTGAACAGGCAC+AGG | 0.594078 | 2_3:+7022797 | None:intergenic |
| AAGGGTGTTGGAAATGGCGG+AGG | 0.594852 | 2_3:-7022857 | Msa0275080:CDS |
| CAGAGTCAGAATCAAGGTGG+AGG | 0.601904 | 2_3:-7022713 | Msa0275080:CDS |
| CCGCAATGATGAATCAACAA+AGG | 0.602271 | 2_3:-7022271 | Msa0275080:CDS |
| TATGGATCTTGAGGATGTTG+AGG | 0.606500 | 2_3:+7022143 | None:intergenic |
| GTTCAAGTTCATGGCTTGGG+TGG | 0.606576 | 2_3:-7022788 | Msa0275080:CDS |
| GGATCTTGAGGATGTTGAGG+TGG | 0.607090 | 2_3:+7022146 | None:intergenic |
| GGACTTCCAAACATGGGTGG+TGG | 0.608332 | 2_3:-7022527 | Msa0275080:CDS |
| ATTTACGCAAGACCACCAAT+GGG | 0.609778 | 2_3:-7022209 | Msa0275080:CDS |
| GAATAATGGACTTCCAAACA+TGG | 0.610386 | 2_3:-7022534 | Msa0275080:CDS |
| GGTGGTGGAAATGGGAATGG+AGG | 0.610911 | 2_3:-7022770 | Msa0275080:CDS |
| TGAGGAGTTTGATGATGAGA+TGG | 0.610932 | 2_3:-7022951 | Msa0275080:CDS |
| ATGTAATTAACACCCATTGG+TGG | 0.615835 | 2_3:+7022197 | None:intergenic |
| GGTGTCAGTGGTGGATATGG+TGG | 0.616024 | 2_3:-7022344 | Msa0275080:CDS |
| ATGATGATGAATGCTCAAAA+GGG | 0.619348 | 2_3:-7022875 | Msa0275080:CDS |
| CCTTTGTTGATTCATCATTG+CGG | 0.622636 | 2_3:+7022271 | None:intergenic |
| GGGAATAAGAATGTTGGTGG+AGG | 0.623326 | 2_3:-7022638 | Msa0275080:CDS |
| AATCAAAATACAAACACGAA+AGG | 0.624431 | 2_3:-7023055 | Msa0275080:CDS |
| AATGGAAAGAAAGGTGGTGG+CGG | 0.625102 | 2_3:-7022833 | Msa0275080:CDS |
| CAAAAGGGTGTTGGAAATGG+CGG | 0.630177 | 2_3:-7022860 | Msa0275080:CDS |
| CCGGCAGCTGCGATGAACGG+CGG | 0.637137 | 2_3:-7022377 | Msa0275080:CDS |
| GGGAATGGAGGAAAGAAAGG+TGG | 0.637548 | 2_3:-7022758 | Msa0275080:CDS |
| ATAAGATGAAACTACCTATG+GGG | 0.647445 | 2_3:-7022916 | Msa0275080:CDS |
| AAATGGAGGTGGAATGCCGG+AGG | 0.650010 | 2_3:-7022669 | Msa0275080:CDS |
| GGTGGGATTCCAAATAACAA+TGG | 0.655401 | 2_3:-7022605 | Msa0275080:CDS |
| AATAATGGACTTCCAAACAT+GGG | 0.656303 | 2_3:-7022533 | Msa0275080:CDS |
| GGTGGAGGTAATAAGAACAA+TGG | 0.658879 | 2_3:-7022698 | Msa0275080:CDS |
| CAAAGGGCAATACCAGCCGG+TGG | 0.662288 | 2_3:-7022254 | Msa0275080:CDS |
| AATGGAGGTGGAATGCCGGA+GGG | 0.666899 | 2_3:-7022668 | Msa0275080:CDS |
| ATGAATGGTATGCCAATGGG+AGG | 0.670599 | 2_3:-7022470 | Msa0275080:CDS |
| TCATATTGTTAGAAACCATG+TGG | 0.673268 | 2_3:+7022489 | None:intergenic |
| GGAGGTAATAAGAACAATGG+TGG | 0.674022 | 2_3:-7022695 | Msa0275080:CDS |
| GGGATTCCAAATAACAATGG+GGG | 0.674410 | 2_3:-7022602 | Msa0275080:CDS |
| GGTGGTCCTGAAATGATGAT+GGG | 0.676791 | 2_3:-7022326 | Msa0275080:CDS |
| GGTCCTGAAATGATGATGGG+TGG | 0.683123 | 2_3:-7022323 | Msa0275080:CDS |
| AATCAGAGTCAGAATCAAGG+TGG | 0.685165 | 2_3:-7022716 | Msa0275080:CDS |
| TAATGATGAGTATTCCGATG+AGG | 0.694469 | 2_3:-7022969 | Msa0275080:CDS |
| AATGGACTTCCAAACATGGG+TGG | 0.695955 | 2_3:-7022530 | Msa0275080:CDS |
| GGAGGCAATGGAAAGAAAGG+TGG | 0.701098 | 2_3:-7022839 | Msa0275080:CDS |
| AAGATGAAACTACCTATGGG+GGG | 0.701851 | 2_3:-7022914 | Msa0275080:CDS |
| TGGGATTCCAAATAACAATG+GGG | 0.736086 | 2_3:-7022603 | Msa0275080:CDS |
| CCAATGATGAGTCAAATGGG+AGG | 0.737345 | 2_3:-7022425 | Msa0275080:CDS |
| GGAGGAGGGTAGCTATACGG+CGG | 0.757400 | 2_3:+7022167 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCGTGTTTGTATTTTGATT+TGG | + | chr2_3:7022106-7022125 | None:intergenic | 25.0% |
| ! | AATCAAAATACAAACACGAA+AGG | - | chr2_3:7022106-7022125 | Msa0275080:CDS | 25.0% |
| ! | AATAAGATGAAACTACCTAT+GGG | - | chr2_3:7022244-7022263 | Msa0275080:CDS | 25.0% |
| ! | AAAAATGGGAATAAGAATGT+TGG | - | chr2_3:7022517-7022536 | Msa0275080:CDS | 25.0% |
| ! | ATGGTTTCTAACAATATGAA+TGG | - | chr2_3:7022676-7022695 | Msa0275080:CDS | 25.0% |
| !!! | TTCGTGTTTGTATTTTGATT+TGG | + | chr2_3:7022106-7022125 | None:intergenic | 25.0% |
| ! | AATCAAAATACAAACACGAA+AGG | - | chr2_3:7022106-7022125 | Msa0275080:CDS | 25.0% |
| ! | AATAAGATGAAACTACCTAT+GGG | - | chr2_3:7022244-7022263 | Msa0275080:CDS | 25.0% |
| ! | AAAAATGGGAATAAGAATGT+TGG | - | chr2_3:7022517-7022536 | Msa0275080:CDS | 25.0% |
| ! | ATGGTTTCTAACAATATGAA+TGG | - | chr2_3:7022676-7022695 | Msa0275080:CDS | 25.0% |
| !!! | TTTGTATTTTGATTTGGTGG+TGG | + | chr2_3:7022100-7022119 | None:intergenic | 30.0% |
| !!! | GTGTTTGTATTTTGATTTGG+TGG | + | chr2_3:7022103-7022122 | None:intergenic | 30.0% |
| GAAAAATCATCATACTCTTC+AGG | + | chr2_3:7022148-7022167 | None:intergenic | 30.0% | |
| !! | TGATTTTTCTGATGATGAGT+TGG | - | chr2_3:7022159-7022178 | Msa0275080:CDS | 30.0% |
| GGTAGTTTCATCTTATTCAA+AGG | + | chr2_3:7022241-7022260 | None:intergenic | 30.0% | |
| GAATAAGATGAAACTACCTA+TGG | - | chr2_3:7022243-7022262 | Msa0275080:CDS | 30.0% | |
| ATAAGATGAAACTACCTATG+GGG | - | chr2_3:7022245-7022264 | Msa0275080:CDS | 30.0% | |
| ! | ATGATGATGAATGCTCAAAA+GGG | - | chr2_3:7022286-7022305 | Msa0275080:CDS | 30.0% |
| AATAATCAGAGTCAGAATCA+AGG | - | chr2_3:7022442-7022461 | Msa0275080:CDS | 30.0% | |
| !! | TTTTTACCCCCATTGTTATT+TGG | + | chr2_3:7022568-7022587 | None:intergenic | 30.0% |
| AAATAACAATGGGGGTAAAA+AGG | - | chr2_3:7022567-7022586 | Msa0275080:CDS | 30.0% | |
| GTTCAAGGTATGATGAATAA+TGG | - | chr2_3:7022613-7022632 | Msa0275080:CDS | 30.0% | |
| !! | AATAATGGACTTCCAAACAT+GGG | - | chr2_3:7022628-7022647 | Msa0275080:CDS | 30.0% |
| TCATATTGTTAGAAACCATG+TGG | + | chr2_3:7022675-7022694 | None:intergenic | 30.0% | |
| AATATGAATGGTATGCCAAT+GGG | - | chr2_3:7022688-7022707 | Msa0275080:CDS | 30.0% | |
| ! | TGTATTGTTGTTGTTGGTAT+GGG | + | chr2_3:7022867-7022886 | None:intergenic | 30.0% |
| ! | ATGTATTGTTGTTGTTGGTA+TGG | + | chr2_3:7022868-7022887 | None:intergenic | 30.0% |
| ATACCAACAACAACAATACA+TGG | - | chr2_3:7022867-7022886 | Msa0275080:CDS | 30.0% | |
| TTGAAATCTATCATTTCCAC+CGG | + | chr2_3:7022926-7022945 | None:intergenic | 30.0% | |
| TACATGTAATTAACACCCAT+TGG | + | chr2_3:7022970-7022989 | None:intergenic | 30.0% | |
| ! | ATTTTCGTCGTTGAAAAAGT+TGG | + | chr2_3:7023046-7023065 | None:intergenic | 30.0% |
| !!! | TTTGTATTTTGATTTGGTGG+TGG | + | chr2_3:7022100-7022119 | None:intergenic | 30.0% |
| !!! | GTGTTTGTATTTTGATTTGG+TGG | + | chr2_3:7022103-7022122 | None:intergenic | 30.0% |
| GAAAAATCATCATACTCTTC+AGG | + | chr2_3:7022148-7022167 | None:intergenic | 30.0% | |
| !! | TGATTTTTCTGATGATGAGT+TGG | - | chr2_3:7022159-7022178 | Msa0275080:CDS | 30.0% |
| GGTAGTTTCATCTTATTCAA+AGG | + | chr2_3:7022241-7022260 | None:intergenic | 30.0% | |
| GAATAAGATGAAACTACCTA+TGG | - | chr2_3:7022243-7022262 | Msa0275080:CDS | 30.0% | |
| ATAAGATGAAACTACCTATG+GGG | - | chr2_3:7022245-7022264 | Msa0275080:CDS | 30.0% | |
| ! | ATGATGATGAATGCTCAAAA+GGG | - | chr2_3:7022286-7022305 | Msa0275080:CDS | 30.0% |
| AATAATCAGAGTCAGAATCA+AGG | - | chr2_3:7022442-7022461 | Msa0275080:CDS | 30.0% | |
| !! | TTTTTACCCCCATTGTTATT+TGG | + | chr2_3:7022568-7022587 | None:intergenic | 30.0% |
| AAATAACAATGGGGGTAAAA+AGG | - | chr2_3:7022567-7022586 | Msa0275080:CDS | 30.0% | |
| GTTCAAGGTATGATGAATAA+TGG | - | chr2_3:7022613-7022632 | Msa0275080:CDS | 30.0% | |
| !! | AATAATGGACTTCCAAACAT+GGG | - | chr2_3:7022628-7022647 | Msa0275080:CDS | 30.0% |
| TCATATTGTTAGAAACCATG+TGG | + | chr2_3:7022675-7022694 | None:intergenic | 30.0% | |
| AATATGAATGGTATGCCAAT+GGG | - | chr2_3:7022688-7022707 | Msa0275080:CDS | 30.0% | |
| ! | TGTATTGTTGTTGTTGGTAT+GGG | + | chr2_3:7022867-7022886 | None:intergenic | 30.0% |
| ! | ATGTATTGTTGTTGTTGGTA+TGG | + | chr2_3:7022868-7022887 | None:intergenic | 30.0% |
| ATACCAACAACAACAATACA+TGG | - | chr2_3:7022867-7022886 | Msa0275080:CDS | 30.0% | |
| TTGAAATCTATCATTTCCAC+CGG | + | chr2_3:7022926-7022945 | None:intergenic | 30.0% | |
| TACATGTAATTAACACCCAT+TGG | + | chr2_3:7022970-7022989 | None:intergenic | 30.0% | |
| ! | ATTTTCGTCGTTGAAAAAGT+TGG | + | chr2_3:7023046-7023065 | None:intergenic | 30.0% |
| TAATGATGAGTATTCCGATG+AGG | - | chr2_3:7022192-7022211 | Msa0275080:CDS | 35.0% | |
| TAAGATGAAACTACCTATGG+GGG | - | chr2_3:7022246-7022265 | Msa0275080:CDS | 35.0% | |
| ! | CATGATGATGAATGCTCAAA+AGG | - | chr2_3:7022285-7022304 | Msa0275080:CDS | 35.0% |
| AAGAACAATGGTGGCAAAAA+TGG | - | chr2_3:7022475-7022494 | Msa0275080:CDS | 35.0% | |
| !! | TTATTCCCATTTTTACCCTC+CGG | + | chr2_3:7022511-7022530 | None:intergenic | 35.0% |
| AATGGGAATAAGAATGTTGG+TGG | - | chr2_3:7022520-7022539 | Msa0275080:CDS | 35.0% | |
| GTGGGATTCCAAATAACAAT+GGG | - | chr2_3:7022557-7022576 | Msa0275080:CDS | 35.0% | |
| TGGGATTCCAAATAACAATG+GGG | - | chr2_3:7022558-7022577 | Msa0275080:CDS | 35.0% | |
| AATGGGGGTAAAAAGGTAAA+TGG | - | chr2_3:7022574-7022593 | Msa0275080:CDS | 35.0% | |
| ATGGGGGTAAAAAGGTAAAT+GGG | - | chr2_3:7022575-7022594 | Msa0275080:CDS | 35.0% | |
| GGTAAAAAGGTAAATGGGAT+GGG | - | chr2_3:7022580-7022599 | Msa0275080:CDS | 35.0% | |
| !! | GAATAATGGACTTCCAAACA+TGG | - | chr2_3:7022627-7022646 | Msa0275080:CDS | 35.0% |
| CAATATGAATGGTATGCCAA+TGG | - | chr2_3:7022687-7022706 | Msa0275080:CDS | 35.0% | |
| ATGCCAATGATGAGTCAAAT+GGG | - | chr2_3:7022733-7022752 | Msa0275080:CDS | 35.0% | |
| !! | CCTTTGTTGATTCATCATTG+CGG | + | chr2_3:7022893-7022912 | None:intergenic | 35.0% |
| CGCAATGATGAATCAACAAA+GGG | - | chr2_3:7022891-7022910 | Msa0275080:CDS | 35.0% | |
| ATGTAATTAACACCCATTGG+TGG | + | chr2_3:7022967-7022986 | None:intergenic | 35.0% | |
| TCGTTGAAAAAGTTGGAGTA+TGG | + | chr2_3:7023039-7023058 | None:intergenic | 35.0% | |
| TAATGATGAGTATTCCGATG+AGG | - | chr2_3:7022192-7022211 | Msa0275080:CDS | 35.0% | |
| TAAGATGAAACTACCTATGG+GGG | - | chr2_3:7022246-7022265 | Msa0275080:CDS | 35.0% | |
| ! | CATGATGATGAATGCTCAAA+AGG | - | chr2_3:7022285-7022304 | Msa0275080:CDS | 35.0% |
| AAGAACAATGGTGGCAAAAA+TGG | - | chr2_3:7022475-7022494 | Msa0275080:CDS | 35.0% | |
| !! | TTATTCCCATTTTTACCCTC+CGG | + | chr2_3:7022511-7022530 | None:intergenic | 35.0% |
| AATGGGAATAAGAATGTTGG+TGG | - | chr2_3:7022520-7022539 | Msa0275080:CDS | 35.0% | |
| GTGGGATTCCAAATAACAAT+GGG | - | chr2_3:7022557-7022576 | Msa0275080:CDS | 35.0% | |
| TGGGATTCCAAATAACAATG+GGG | - | chr2_3:7022558-7022577 | Msa0275080:CDS | 35.0% | |
| AATGGGGGTAAAAAGGTAAA+TGG | - | chr2_3:7022574-7022593 | Msa0275080:CDS | 35.0% | |
| ATGGGGGTAAAAAGGTAAAT+GGG | - | chr2_3:7022575-7022594 | Msa0275080:CDS | 35.0% | |
| GGTAAAAAGGTAAATGGGAT+GGG | - | chr2_3:7022580-7022599 | Msa0275080:CDS | 35.0% | |
| !! | GAATAATGGACTTCCAAACA+TGG | - | chr2_3:7022627-7022646 | Msa0275080:CDS | 35.0% |
| CAATATGAATGGTATGCCAA+TGG | - | chr2_3:7022687-7022706 | Msa0275080:CDS | 35.0% | |
| ATGCCAATGATGAGTCAAAT+GGG | - | chr2_3:7022733-7022752 | Msa0275080:CDS | 35.0% | |
| !! | CCTTTGTTGATTCATCATTG+CGG | + | chr2_3:7022893-7022912 | None:intergenic | 35.0% |
| CGCAATGATGAATCAACAAA+GGG | - | chr2_3:7022891-7022910 | Msa0275080:CDS | 35.0% | |
| ATGTAATTAACACCCATTGG+TGG | + | chr2_3:7022967-7022986 | None:intergenic | 35.0% | |
| TCGTTGAAAAAGTTGGAGTA+TGG | + | chr2_3:7023039-7023058 | None:intergenic | 35.0% | |
| CTCATCATCAAACTCCTCAT+CGG | + | chr2_3:7022209-7022228 | None:intergenic | 40.0% | |
| !! | TGAGGAGTTTGATGATGAGA+TGG | - | chr2_3:7022210-7022229 | Msa0275080:CDS | 40.0% |
| AAGATGAAACTACCTATGGG+GGG | - | chr2_3:7022247-7022266 | Msa0275080:CDS | 40.0% | |
| ! | ATGAATGCTCAAAAGGGTGT+TGG | - | chr2_3:7022292-7022311 | Msa0275080:CDS | 40.0% |
| AATGGGAATGGAGGAAAGAA+AGG | - | chr2_3:7022400-7022419 | Msa0275080:CDS | 40.0% | |
| AATCAGAGTCAGAATCAAGG+TGG | - | chr2_3:7022445-7022464 | Msa0275080:CDS | 40.0% | |
| GGTGGAGGTAATAAGAACAA+TGG | - | chr2_3:7022463-7022482 | Msa0275080:CDS | 40.0% | |
| GGAGGTAATAAGAACAATGG+TGG | - | chr2_3:7022466-7022485 | Msa0275080:CDS | 40.0% | |
| AACAATGGTGGCAAAAATGG+AGG | - | chr2_3:7022478-7022497 | Msa0275080:CDS | 40.0% | |
| ! | AATAAGAATGTTGGTGGAGG+TGG | - | chr2_3:7022526-7022545 | Msa0275080:CDS | 40.0% |
| GGTGGGATTCCAAATAACAA+TGG | - | chr2_3:7022556-7022575 | Msa0275080:CDS | 40.0% | |
| GGGATTCCAAATAACAATGG+GGG | - | chr2_3:7022559-7022578 | Msa0275080:CDS | 40.0% | |
| GGGTAAAAAGGTAAATGGGA+TGG | - | chr2_3:7022579-7022598 | Msa0275080:CDS | 40.0% | |
| CATGCCAATGATGAGTCAAA+TGG | - | chr2_3:7022732-7022751 | Msa0275080:CDS | 40.0% | |
| TTTCCACCCATCATCATTTC+AGG | + | chr2_3:7022844-7022863 | None:intergenic | 40.0% | |
| CCGCAATGATGAATCAACAA+AGG | - | chr2_3:7022890-7022909 | Msa0275080:CDS | 40.0% | |
| ATTTACGCAAGACCACCAAT+GGG | - | chr2_3:7022952-7022971 | Msa0275080:CDS | 40.0% | |
| TATGGATCTTGAGGATGTTG+AGG | + | chr2_3:7023021-7023040 | None:intergenic | 40.0% | |
| AAGTTGGAGTATGGATCTTG+AGG | + | chr2_3:7023030-7023049 | None:intergenic | 40.0% | |
| CTCATCATCAAACTCCTCAT+CGG | + | chr2_3:7022209-7022228 | None:intergenic | 40.0% | |
| !! | TGAGGAGTTTGATGATGAGA+TGG | - | chr2_3:7022210-7022229 | Msa0275080:CDS | 40.0% |
| AAGATGAAACTACCTATGGG+GGG | - | chr2_3:7022247-7022266 | Msa0275080:CDS | 40.0% | |
| ! | ATGAATGCTCAAAAGGGTGT+TGG | - | chr2_3:7022292-7022311 | Msa0275080:CDS | 40.0% |
| AATGGGAATGGAGGAAAGAA+AGG | - | chr2_3:7022400-7022419 | Msa0275080:CDS | 40.0% | |
| AATCAGAGTCAGAATCAAGG+TGG | - | chr2_3:7022445-7022464 | Msa0275080:CDS | 40.0% | |
| GGTGGAGGTAATAAGAACAA+TGG | - | chr2_3:7022463-7022482 | Msa0275080:CDS | 40.0% | |
| GGAGGTAATAAGAACAATGG+TGG | - | chr2_3:7022466-7022485 | Msa0275080:CDS | 40.0% | |
| AACAATGGTGGCAAAAATGG+AGG | - | chr2_3:7022478-7022497 | Msa0275080:CDS | 40.0% | |
| ! | AATAAGAATGTTGGTGGAGG+TGG | - | chr2_3:7022526-7022545 | Msa0275080:CDS | 40.0% |
| GGTGGGATTCCAAATAACAA+TGG | - | chr2_3:7022556-7022575 | Msa0275080:CDS | 40.0% | |
| GGGATTCCAAATAACAATGG+GGG | - | chr2_3:7022559-7022578 | Msa0275080:CDS | 40.0% | |
| GGGTAAAAAGGTAAATGGGA+TGG | - | chr2_3:7022579-7022598 | Msa0275080:CDS | 40.0% | |
| CATGCCAATGATGAGTCAAA+TGG | - | chr2_3:7022732-7022751 | Msa0275080:CDS | 40.0% | |
| TTTCCACCCATCATCATTTC+AGG | + | chr2_3:7022844-7022863 | None:intergenic | 40.0% | |
| CCGCAATGATGAATCAACAA+AGG | - | chr2_3:7022890-7022909 | Msa0275080:CDS | 40.0% | |
| ATTTACGCAAGACCACCAAT+GGG | - | chr2_3:7022952-7022971 | Msa0275080:CDS | 40.0% | |
| TATGGATCTTGAGGATGTTG+AGG | + | chr2_3:7023021-7023040 | None:intergenic | 40.0% | |
| AAGTTGGAGTATGGATCTTG+AGG | + | chr2_3:7023030-7023049 | None:intergenic | 40.0% | |
| AAACTACCTATGGGGGGTAA+TGG | - | chr2_3:7022253-7022272 | Msa0275080:CDS | 45.0% | |
| GCATTCATCATCATGTGAGC+AGG | + | chr2_3:7022280-7022299 | None:intergenic | 45.0% | |
| !! | GCTCAAAAGGGTGTTGGAAA+TGG | - | chr2_3:7022298-7022317 | Msa0275080:CDS | 45.0% |
| !! | CAAAAGGGTGTTGGAAATGG+CGG | - | chr2_3:7022301-7022320 | Msa0275080:CDS | 45.0% |
| ! | AATGGAAAGAAAGGTGGTGG+CGG | - | chr2_3:7022328-7022347 | Msa0275080:CDS | 45.0% |
| ! | CCTGTTCAAGTTCATGGCTT+GGG | - | chr2_3:7022370-7022389 | Msa0275080:CDS | 45.0% |
| AATGGAGGAAAGAAAGGTGG+TGG | - | chr2_3:7022406-7022425 | Msa0275080:CDS | 45.0% | |
| AATGGTGGCAAAAATGGAGG+TGG | - | chr2_3:7022481-7022500 | Msa0275080:CDS | 45.0% | |
| CAAAAATGGAGGTGGAATGC+CGG | - | chr2_3:7022489-7022508 | Msa0275080:CDS | 45.0% | |
| GAATGCCGGAGGGTAAAAAT+GGG | - | chr2_3:7022503-7022522 | Msa0275080:CDS | 45.0% | |
| ! | GGGAATAAGAATGTTGGTGG+AGG | - | chr2_3:7022523-7022542 | Msa0275080:CDS | 45.0% |
| GTAAATGGGATGGGAGAAAG+TGG | - | chr2_3:7022589-7022608 | Msa0275080:CDS | 45.0% | |
| ATGGGAGAAAGTGGTGTTCA+AGG | - | chr2_3:7022598-7022617 | Msa0275080:CDS | 45.0% | |
| ! | AATGGACTTCCAAACATGGG+TGG | - | chr2_3:7022631-7022650 | Msa0275080:CDS | 45.0% |
| ATGAATGGTATGCCAATGGG+AGG | - | chr2_3:7022691-7022710 | Msa0275080:CDS | 45.0% | |
| CCTCCCATTTGACTCATCAT+TGG | + | chr2_3:7022739-7022758 | None:intergenic | 45.0% | |
| CCAATGATGAGTCAAATGGG+AGG | - | chr2_3:7022736-7022755 | Msa0275080:CDS | 45.0% | |
| TGGTGGTCCTGAAATGATGA+TGG | - | chr2_3:7022834-7022853 | Msa0275080:CDS | 45.0% | |
| GGTGGTCCTGAAATGATGAT+GGG | - | chr2_3:7022835-7022854 | Msa0275080:CDS | 45.0% | |
| ! | CGGCCATGTATTGTTGTTGT+TGG | + | chr2_3:7022873-7022892 | None:intergenic | 45.0% |
| AATCTATCATTTCCACCGGC+TGG | + | chr2_3:7022922-7022941 | None:intergenic | 45.0% | |
| ! | GGTGGTCTTGCGTAAATCAT+TGG | + | chr2_3:7022949-7022968 | None:intergenic | 45.0% |
| GATTTACGCAAGACCACCAA+TGG | - | chr2_3:7022951-7022970 | Msa0275080:CDS | 45.0% | |
| AAACTACCTATGGGGGGTAA+TGG | - | chr2_3:7022253-7022272 | Msa0275080:CDS | 45.0% | |
| GCATTCATCATCATGTGAGC+AGG | + | chr2_3:7022280-7022299 | None:intergenic | 45.0% | |
| !! | GCTCAAAAGGGTGTTGGAAA+TGG | - | chr2_3:7022298-7022317 | Msa0275080:CDS | 45.0% |
| !! | CAAAAGGGTGTTGGAAATGG+CGG | - | chr2_3:7022301-7022320 | Msa0275080:CDS | 45.0% |
| ! | AATGGAAAGAAAGGTGGTGG+CGG | - | chr2_3:7022328-7022347 | Msa0275080:CDS | 45.0% |
| ! | CCTGTTCAAGTTCATGGCTT+GGG | - | chr2_3:7022370-7022389 | Msa0275080:CDS | 45.0% |
| AATGGAGGAAAGAAAGGTGG+TGG | - | chr2_3:7022406-7022425 | Msa0275080:CDS | 45.0% | |
| AATGGTGGCAAAAATGGAGG+TGG | - | chr2_3:7022481-7022500 | Msa0275080:CDS | 45.0% | |
| CAAAAATGGAGGTGGAATGC+CGG | - | chr2_3:7022489-7022508 | Msa0275080:CDS | 45.0% | |
| GAATGCCGGAGGGTAAAAAT+GGG | - | chr2_3:7022503-7022522 | Msa0275080:CDS | 45.0% | |
| ! | GGGAATAAGAATGTTGGTGG+AGG | - | chr2_3:7022523-7022542 | Msa0275080:CDS | 45.0% |
| GTAAATGGGATGGGAGAAAG+TGG | - | chr2_3:7022589-7022608 | Msa0275080:CDS | 45.0% | |
| ATGGGAGAAAGTGGTGTTCA+AGG | - | chr2_3:7022598-7022617 | Msa0275080:CDS | 45.0% | |
| ! | AATGGACTTCCAAACATGGG+TGG | - | chr2_3:7022631-7022650 | Msa0275080:CDS | 45.0% |
| ATGAATGGTATGCCAATGGG+AGG | - | chr2_3:7022691-7022710 | Msa0275080:CDS | 45.0% | |
| CCTCCCATTTGACTCATCAT+TGG | + | chr2_3:7022739-7022758 | None:intergenic | 45.0% | |
| CCAATGATGAGTCAAATGGG+AGG | - | chr2_3:7022736-7022755 | Msa0275080:CDS | 45.0% | |
| TGGTGGTCCTGAAATGATGA+TGG | - | chr2_3:7022834-7022853 | Msa0275080:CDS | 45.0% | |
| GGTGGTCCTGAAATGATGAT+GGG | - | chr2_3:7022835-7022854 | Msa0275080:CDS | 45.0% | |
| ! | CGGCCATGTATTGTTGTTGT+TGG | + | chr2_3:7022873-7022892 | None:intergenic | 45.0% |
| AATCTATCATTTCCACCGGC+TGG | + | chr2_3:7022922-7022941 | None:intergenic | 45.0% | |
| ! | GGTGGTCTTGCGTAAATCAT+TGG | + | chr2_3:7022949-7022968 | None:intergenic | 45.0% |
| GATTTACGCAAGACCACCAA+TGG | - | chr2_3:7022951-7022970 | Msa0275080:CDS | 45.0% | |
| GGAGGCAATGGAAAGAAAGG+TGG | - | chr2_3:7022322-7022341 | Msa0275080:CDS | 50.0% | |
| GGCAATGGAAAGAAAGGTGG+TGG | - | chr2_3:7022325-7022344 | Msa0275080:CDS | 50.0% | |
| CCATGAACTTGAACAGGCAC+AGG | + | chr2_3:7022367-7022386 | None:intergenic | 50.0% | |
| ! | CCTGTGCCTGTTCAAGTTCA+TGG | - | chr2_3:7022364-7022383 | Msa0275080:CDS | 50.0% |
| ! | GCCTGTTCAAGTTCATGGCT+TGG | - | chr2_3:7022369-7022388 | Msa0275080:CDS | 50.0% |
| CCCAAGCCATGAACTTGAAC+AGG | + | chr2_3:7022373-7022392 | None:intergenic | 50.0% | |
| ! | GTTCAAGTTCATGGCTTGGG+TGG | - | chr2_3:7022373-7022392 | Msa0275080:CDS | 50.0% |
| !! | ATGGCTTGGGTGGTGGAAAT+GGG | - | chr2_3:7022383-7022402 | Msa0275080:CDS | 50.0% |
| !! | TTGGGTGGTGGAAATGGGAA+TGG | - | chr2_3:7022388-7022407 | Msa0275080:CDS | 50.0% |
| GGGAATGGAGGAAAGAAAGG+TGG | - | chr2_3:7022403-7022422 | Msa0275080:CDS | 50.0% | |
| CAGAGTCAGAATCAAGGTGG+AGG | - | chr2_3:7022448-7022467 | Msa0275080:CDS | 50.0% | |
| GGAATGCCGGAGGGTAAAAA+TGG | - | chr2_3:7022502-7022521 | Msa0275080:CDS | 50.0% | |
| ! | AAGAATGTTGGTGGAGGTGG+TGG | - | chr2_3:7022529-7022548 | Msa0275080:CDS | 50.0% |
| ! | GGTGGTGGTCATCCTAATGT+GGG | - | chr2_3:7022649-7022668 | Msa0275080:CDS | 50.0% |
| TCATCCTAATGTGGGCCACA+TGG | - | chr2_3:7022657-7022676 | Msa0275080:CDS | 50.0% | |
| GAAACCATGTGGCCCACATT+AGG | + | chr2_3:7022664-7022683 | None:intergenic | 50.0% | |
| AATGGTATGCCAATGGGAGG+AGG | - | chr2_3:7022694-7022713 | Msa0275080:CDS | 50.0% | |
| GGTAACATGCCAGCTGTTCA+AGG | - | chr2_3:7022757-7022776 | Msa0275080:CDS | 50.0% | |
| !! | GGTCCTGAAATGATGATGGG+TGG | - | chr2_3:7022838-7022857 | Msa0275080:CDS | 50.0% |
| CAACAAAGGGCAATACCAGC+CGG | - | chr2_3:7022904-7022923 | Msa0275080:CDS | 50.0% | |
| TCTTGAGGATGTTGAGGTGG+AGG | + | chr2_3:7023015-7023034 | None:intergenic | 50.0% | |
| GGATCTTGAGGATGTTGAGG+TGG | + | chr2_3:7023018-7023037 | None:intergenic | 50.0% | |
| GGAGGCAATGGAAAGAAAGG+TGG | - | chr2_3:7022322-7022341 | Msa0275080:CDS | 50.0% | |
| GGCAATGGAAAGAAAGGTGG+TGG | - | chr2_3:7022325-7022344 | Msa0275080:CDS | 50.0% | |
| CCATGAACTTGAACAGGCAC+AGG | + | chr2_3:7022367-7022386 | None:intergenic | 50.0% | |
| ! | CCTGTGCCTGTTCAAGTTCA+TGG | - | chr2_3:7022364-7022383 | Msa0275080:CDS | 50.0% |
| ! | GCCTGTTCAAGTTCATGGCT+TGG | - | chr2_3:7022369-7022388 | Msa0275080:CDS | 50.0% |
| CCCAAGCCATGAACTTGAAC+AGG | + | chr2_3:7022373-7022392 | None:intergenic | 50.0% | |
| ! | GTTCAAGTTCATGGCTTGGG+TGG | - | chr2_3:7022373-7022392 | Msa0275080:CDS | 50.0% |
| !! | ATGGCTTGGGTGGTGGAAAT+GGG | - | chr2_3:7022383-7022402 | Msa0275080:CDS | 50.0% |
| !! | TTGGGTGGTGGAAATGGGAA+TGG | - | chr2_3:7022388-7022407 | Msa0275080:CDS | 50.0% |
| GGGAATGGAGGAAAGAAAGG+TGG | - | chr2_3:7022403-7022422 | Msa0275080:CDS | 50.0% | |
| CAGAGTCAGAATCAAGGTGG+AGG | - | chr2_3:7022448-7022467 | Msa0275080:CDS | 50.0% | |
| GGAATGCCGGAGGGTAAAAA+TGG | - | chr2_3:7022502-7022521 | Msa0275080:CDS | 50.0% | |
| ! | AAGAATGTTGGTGGAGGTGG+TGG | - | chr2_3:7022529-7022548 | Msa0275080:CDS | 50.0% |
| ! | GGTGGTGGTCATCCTAATGT+GGG | - | chr2_3:7022649-7022668 | Msa0275080:CDS | 50.0% |
| TCATCCTAATGTGGGCCACA+TGG | - | chr2_3:7022657-7022676 | Msa0275080:CDS | 50.0% | |
| GAAACCATGTGGCCCACATT+AGG | + | chr2_3:7022664-7022683 | None:intergenic | 50.0% | |
| AATGGTATGCCAATGGGAGG+AGG | - | chr2_3:7022694-7022713 | Msa0275080:CDS | 50.0% | |
| GGTAACATGCCAGCTGTTCA+AGG | - | chr2_3:7022757-7022776 | Msa0275080:CDS | 50.0% | |
| !! | GGTCCTGAAATGATGATGGG+TGG | - | chr2_3:7022838-7022857 | Msa0275080:CDS | 50.0% |
| CAACAAAGGGCAATACCAGC+CGG | - | chr2_3:7022904-7022923 | Msa0275080:CDS | 50.0% | |
| TCTTGAGGATGTTGAGGTGG+AGG | + | chr2_3:7023015-7023034 | None:intergenic | 50.0% | |
| GGATCTTGAGGATGTTGAGG+TGG | + | chr2_3:7023018-7023037 | None:intergenic | 50.0% | |
| !! | AAGGGTGTTGGAAATGGCGG+AGG | - | chr2_3:7022304-7022323 | Msa0275080:CDS | 55.0% |
| ! | GTTGGAAATGGCGGAGGCAA+TGG | - | chr2_3:7022310-7022329 | Msa0275080:CDS | 55.0% |
| GGCGGAGGCAATGGAAAGAA+AGG | - | chr2_3:7022319-7022338 | Msa0275080:CDS | 55.0% | |
| ! | CAAGTTCATGGCTTGGGTGG+TGG | - | chr2_3:7022376-7022395 | Msa0275080:CDS | 55.0% |
| !! | CATGGCTTGGGTGGTGGAAA+TGG | - | chr2_3:7022382-7022401 | Msa0275080:CDS | 55.0% |
| !! | GGTGGTGGAAATGGGAATGG+AGG | - | chr2_3:7022391-7022410 | Msa0275080:CDS | 55.0% |
| ! | GGAGGAAAGAAAGGTGGTGG+CGG | - | chr2_3:7022409-7022428 | Msa0275080:CDS | 55.0% |
| AAATGGAGGTGGAATGCCGG+AGG | - | chr2_3:7022492-7022511 | Msa0275080:CDS | 55.0% | |
| AATGGAGGTGGAATGCCGGA+GGG | - | chr2_3:7022493-7022512 | Msa0275080:CDS | 55.0% | |
| ! | GTTGGTGGAGGTGGTGGTAA+TGG | - | chr2_3:7022535-7022554 | Msa0275080:CDS | 55.0% |
| !! | GTGGAGGTGGTGGTAATGGT+GGG | - | chr2_3:7022539-7022558 | Msa0275080:CDS | 55.0% |
| GGACTTCCAAACATGGGTGG+TGG | - | chr2_3:7022634-7022653 | Msa0275080:CDS | 55.0% | |
| GGATGACCACCACCCATGTT+TGG | + | chr2_3:7022643-7022662 | None:intergenic | 55.0% | |
| ! | GGGTGGTGGTCATCCTAATG+TGG | - | chr2_3:7022648-7022667 | Msa0275080:CDS | 55.0% |
| CCAATGGGAGGAGGAGCAAT+GGG | - | chr2_3:7022703-7022722 | Msa0275080:CDS | 55.0% | |
| !! | GGTGTCAGTGGTGGATATGG+TGG | - | chr2_3:7022817-7022836 | Msa0275080:CDS | 55.0% |
| GGTGGAGGAGGGTAGCTATA+CGG | + | chr2_3:7023000-7023019 | None:intergenic | 55.0% | |
| GAGGATGTTGAGGTGGAGGA+GGG | + | chr2_3:7023011-7023030 | None:intergenic | 55.0% | |
| TGAGGATGTTGAGGTGGAGG+AGG | + | chr2_3:7023012-7023031 | None:intergenic | 55.0% | |
| !! | AAGGGTGTTGGAAATGGCGG+AGG | - | chr2_3:7022304-7022323 | Msa0275080:CDS | 55.0% |
| ! | GTTGGAAATGGCGGAGGCAA+TGG | - | chr2_3:7022310-7022329 | Msa0275080:CDS | 55.0% |
| GGCGGAGGCAATGGAAAGAA+AGG | - | chr2_3:7022319-7022338 | Msa0275080:CDS | 55.0% | |
| ! | CAAGTTCATGGCTTGGGTGG+TGG | - | chr2_3:7022376-7022395 | Msa0275080:CDS | 55.0% |
| !! | CATGGCTTGGGTGGTGGAAA+TGG | - | chr2_3:7022382-7022401 | Msa0275080:CDS | 55.0% |
| !! | GGTGGTGGAAATGGGAATGG+AGG | - | chr2_3:7022391-7022410 | Msa0275080:CDS | 55.0% |
| ! | GGAGGAAAGAAAGGTGGTGG+CGG | - | chr2_3:7022409-7022428 | Msa0275080:CDS | 55.0% |
| AAATGGAGGTGGAATGCCGG+AGG | - | chr2_3:7022492-7022511 | Msa0275080:CDS | 55.0% | |
| AATGGAGGTGGAATGCCGGA+GGG | - | chr2_3:7022493-7022512 | Msa0275080:CDS | 55.0% | |
| ! | GTTGGTGGAGGTGGTGGTAA+TGG | - | chr2_3:7022535-7022554 | Msa0275080:CDS | 55.0% |
| !! | GTGGAGGTGGTGGTAATGGT+GGG | - | chr2_3:7022539-7022558 | Msa0275080:CDS | 55.0% |
| GGACTTCCAAACATGGGTGG+TGG | - | chr2_3:7022634-7022653 | Msa0275080:CDS | 55.0% | |
| GGATGACCACCACCCATGTT+TGG | + | chr2_3:7022643-7022662 | None:intergenic | 55.0% | |
| ! | GGGTGGTGGTCATCCTAATG+TGG | - | chr2_3:7022648-7022667 | Msa0275080:CDS | 55.0% |
| CCAATGGGAGGAGGAGCAAT+GGG | - | chr2_3:7022703-7022722 | Msa0275080:CDS | 55.0% | |
| !! | GGTGTCAGTGGTGGATATGG+TGG | - | chr2_3:7022817-7022836 | Msa0275080:CDS | 55.0% |
| GGTGGAGGAGGGTAGCTATA+CGG | + | chr2_3:7023000-7023019 | None:intergenic | 55.0% | |
| GAGGATGTTGAGGTGGAGGA+GGG | + | chr2_3:7023011-7023030 | None:intergenic | 55.0% | |
| TGAGGATGTTGAGGTGGAGG+AGG | + | chr2_3:7023012-7023031 | None:intergenic | 55.0% | |
| GCAGGACCATTACCCCCCAT+AGG | + | chr2_3:7022262-7022281 | None:intergenic | 60.0% | |
| !! | AAGAAAGGTGGTGGCGGCAG+TGG | - | chr2_3:7022334-7022353 | Msa0275080:CDS | 60.0% |
| !! | GGAAAGAAAGGTGGTGGCGG+TGG | - | chr2_3:7022331-7022350 | Msa0275080:CDS | 60.0% |
| !! | AAGAAAGGTGGTGGCGGTGG+CGG | - | chr2_3:7022415-7022434 | Msa0275080:CDS | 60.0% |
| !! | GGTGGAGGTGGTGGTAATGG+TGG | - | chr2_3:7022538-7022557 | Msa0275080:CDS | 60.0% |
| GCCAATGGGAGGAGGAGCAA+TGG | - | chr2_3:7022702-7022721 | Msa0275080:CDS | 60.0% | |
| CCCATTGCTCCTCCTCCCAT+TGG | + | chr2_3:7022706-7022725 | None:intergenic | 60.0% | |
| GCCAGCTGTTCAAGGCCTAC+CGG | - | chr2_3:7022765-7022784 | Msa0275080:CDS | 60.0% | |
| CTACCGGCAGCTGCGATGAA+CGG | - | chr2_3:7022781-7022800 | Msa0275080:CDS | 60.0% | |
| !! | GGCGGTGTCAGTGGTGGATA+TGG | - | chr2_3:7022814-7022833 | Msa0275080:CDS | 60.0% |
| CAAAGGGCAATACCAGCCGG+TGG | - | chr2_3:7022907-7022926 | Msa0275080:CDS | 60.0% | |
| GGAGGAGGGTAGCTATACGG+CGG | + | chr2_3:7022997-7023016 | None:intergenic | 60.0% | |
| GCAGGACCATTACCCCCCAT+AGG | + | chr2_3:7022262-7022281 | None:intergenic | 60.0% | |
| !! | AAGAAAGGTGGTGGCGGCAG+TGG | - | chr2_3:7022334-7022353 | Msa0275080:CDS | 60.0% |
| !! | GGAAAGAAAGGTGGTGGCGG+TGG | - | chr2_3:7022331-7022350 | Msa0275080:CDS | 60.0% |
| !! | AAGAAAGGTGGTGGCGGTGG+CGG | - | chr2_3:7022415-7022434 | Msa0275080:CDS | 60.0% |
| !! | GGTGGAGGTGGTGGTAATGG+TGG | - | chr2_3:7022538-7022557 | Msa0275080:CDS | 60.0% |
| GCCAATGGGAGGAGGAGCAA+TGG | - | chr2_3:7022702-7022721 | Msa0275080:CDS | 60.0% | |
| CCCATTGCTCCTCCTCCCAT+TGG | + | chr2_3:7022706-7022725 | None:intergenic | 60.0% | |
| GCCAGCTGTTCAAGGCCTAC+CGG | - | chr2_3:7022765-7022784 | Msa0275080:CDS | 60.0% | |
| CTACCGGCAGCTGCGATGAA+CGG | - | chr2_3:7022781-7022800 | Msa0275080:CDS | 60.0% | |
| !! | GGCGGTGTCAGTGGTGGATA+TGG | - | chr2_3:7022814-7022833 | Msa0275080:CDS | 60.0% |
| CAAAGGGCAATACCAGCCGG+TGG | - | chr2_3:7022907-7022926 | Msa0275080:CDS | 60.0% | |
| GGAGGAGGGTAGCTATACGG+CGG | + | chr2_3:7022997-7023016 | None:intergenic | 60.0% | |
| !! | AAAGGTGGTGGCGGCAGTGG+TGG | - | chr2_3:7022337-7022356 | Msa0275080:CDS | 65.0% |
| GCCGGTAGGCCTTGAACAGC+TGG | + | chr2_3:7022769-7022788 | None:intergenic | 65.0% | |
| CGTTCATCGCAGCTGCCGGT+AGG | + | chr2_3:7022783-7022802 | None:intergenic | 65.0% | |
| ATGAACGGCGGTGGAGGAGG+CGG | - | chr2_3:7022796-7022815 | Msa0275080:CDS | 65.0% | |
| GGAGGGTAGCTATACGGCGG+AGG | + | chr2_3:7022994-7023013 | None:intergenic | 65.0% | |
| !! | AAAGGTGGTGGCGGCAGTGG+TGG | - | chr2_3:7022337-7022356 | Msa0275080:CDS | 65.0% |
| GCCGGTAGGCCTTGAACAGC+TGG | + | chr2_3:7022769-7022788 | None:intergenic | 65.0% | |
| CGTTCATCGCAGCTGCCGGT+AGG | + | chr2_3:7022783-7022802 | None:intergenic | 65.0% | |
| ATGAACGGCGGTGGAGGAGG+CGG | - | chr2_3:7022796-7022815 | Msa0275080:CDS | 65.0% | |
| GGAGGGTAGCTATACGGCGG+AGG | + | chr2_3:7022994-7023013 | None:intergenic | 65.0% | |
| !! | AAAGGTGGTGGCGGTGGCGG+TGG | - | chr2_3:7022418-7022437 | Msa0275080:CDS | 70.0% |
| CCGCCGTTCATCGCAGCTGC+CGG | + | chr2_3:7022787-7022806 | None:intergenic | 70.0% | |
| CCGGCAGCTGCGATGAACGG+CGG | - | chr2_3:7022784-7022803 | Msa0275080:CDS | 70.0% | |
| GCAGCTGCGATGAACGGCGG+TGG | - | chr2_3:7022787-7022806 | Msa0275080:CDS | 70.0% | |
| GCTGCGATGAACGGCGGTGG+AGG | - | chr2_3:7022790-7022809 | Msa0275080:CDS | 70.0% | |
| GCGATGAACGGCGGTGGAGG+AGG | - | chr2_3:7022793-7022812 | Msa0275080:CDS | 70.0% | |
| ! | GGTGGAGGAGGCGGTGTCAG+TGG | - | chr2_3:7022805-7022824 | Msa0275080:CDS | 70.0% |
| ! | GGAGGAGGCGGTGTCAGTGG+TGG | - | chr2_3:7022808-7022827 | Msa0275080:CDS | 70.0% |
| !! | AAAGGTGGTGGCGGTGGCGG+TGG | - | chr2_3:7022418-7022437 | Msa0275080:CDS | 70.0% |
| CCGCCGTTCATCGCAGCTGC+CGG | + | chr2_3:7022787-7022806 | None:intergenic | 70.0% | |
| CCGGCAGCTGCGATGAACGG+CGG | - | chr2_3:7022784-7022803 | Msa0275080:CDS | 70.0% | |
| GCAGCTGCGATGAACGGCGG+TGG | - | chr2_3:7022787-7022806 | Msa0275080:CDS | 70.0% | |
| GCTGCGATGAACGGCGGTGG+AGG | - | chr2_3:7022790-7022809 | Msa0275080:CDS | 70.0% | |
| GCGATGAACGGCGGTGGAGG+AGG | - | chr2_3:7022793-7022812 | Msa0275080:CDS | 70.0% | |
| ! | GGTGGAGGAGGCGGTGTCAG+TGG | - | chr2_3:7022805-7022824 | Msa0275080:CDS | 70.0% |
| ! | GGAGGAGGCGGTGTCAGTGG+TGG | - | chr2_3:7022808-7022827 | Msa0275080:CDS | 70.0% |
| !! | GGTGGTGGCGGCAGTGGTGG+AGG | - | chr2_3:7022340-7022359 | Msa0275080:CDS | 75.0% |
| !! | GGTGGTGGCGGCAGTGGTGG+AGG | - | chr2_3:7022340-7022359 | Msa0275080:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 7022094 | 7023089 | 7022094 | ID=Msa0275080;Name=Msa0275080 |
| chr2_3 | mRNA | 7022094 | 7023089 | 7022094 | ID=Msa0275080-mRNA-1;Parent=Msa0275080;Name=Msa0275080-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|-1|0|1|-1|1|1|0|331 |
| chr2_3 | exon | 7022094 | 7023089 | 7022094 | ID=Msa0275080-mRNA-1:exon:3315;Parent=Msa0275080-mRNA-1 |
| chr2_3 | CDS | 7022094 | 7023089 | 7022094 | ID=Msa0275080-mRNA-1:cds;Parent=Msa0275080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
