AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0631170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0631170 MtrunA17_Chr4g0008551 92.857 350 10 2 1 335 1 350 0.0 653
Msa0631170 MtrunA17_Chr3g0133601 65.741 108 22 2 36 128 35 142 3.81e-41 143
Msa0631170 MtrunA17_Chr4g0053431 64.078 103 23 1 36 124 3 105 3.49e-39 139
Msa0631170 MtrunA17_Chr5g0401731 61.165 103 26 1 36 124 13 115 1.41e-36 134
Msa0631170 MtrunA17_Chr5g0437321 60.748 107 28 1 29 121 10 116 8.34e-36 131
Msa0631170 MtrunA17_Chr6g0454921 57.282 103 30 1 36 124 13 115 2.02e-34 125
Msa0631170 MtrunA17_Chr3g0125801 53.465 101 33 2 38 124 16 116 1.51e-29 114
Msa0631170 MtrunA17_Chr7g0238631 51.961 102 35 1 37 124 112 213 2.37e-29 118
Msa0631170 MtrunA17_Chr5g0417621 48.214 112 44 1 27 124 123 234 2.39e-29 117
Msa0631170 MtrunA17_Chr1g0157731 42.208 154 71 4 37 174 90 241 3.53e-29 118
Msa0631170 MtrunA17_Chr4g0058991 52.941 102 34 1 37 124 208 309 5.30e-29 116
Msa0631170 MtrunA17_Chr4g0042501 44.355 124 55 1 15 124 82 205 5.82e-29 115
Msa0631170 MtrunA17_Chr7g0254261 51.485 101 35 2 38 124 89 189 8.33e-29 114
Msa0631170 MtrunA17_Chr7g0228531 52.475 101 35 1 37 124 219 319 8.99e-29 115
Msa0631170 MtrunA17_Chr5g0429661 49.515 103 38 1 37 125 121 223 7.77e-28 111
Msa0631170 MtrunA17_Chr6g0480581 48.000 100 38 1 38 123 4 103 1.12e-27 108
Msa0631170 MtrunA17_Chr3g0139671 46.078 102 41 1 37 124 84 185 3.50e-27 112
Msa0631170 MtrunA17_Chr7g0228481 52.525 99 34 1 37 122 219 317 6.48e-27 110
Msa0631170 MtrunA17_Chr6g0460671 45.370 108 45 1 31 124 92 199 9.54e-27 108
Msa0631170 MtrunA17_Chr3g0117511 50.000 102 37 1 37 124 182 283 1.64e-26 108
Msa0631170 MtrunA17_Chr5g0417821 50.962 104 36 2 38 126 9 112 1.09e-25 104
Msa0631170 MtrunA17_Chr3g0103281 38.732 142 68 3 38 160 14 155 7.18e-25 102
Msa0631170 MtrunA17_Chr1g0167661 38.415 164 82 4 38 182 14 177 1.36e-24 100
Msa0631170 MtrunA17_Chr6g0460661 41.441 111 51 1 28 124 6 116 2.44e-24 97.4
Msa0631170 MtrunA17_Chr3g0099131 45.217 115 43 3 38 132 43 157 8.44e-24 102
Msa0631170 MtrunA17_Chr2g0281071 43.802 121 48 4 30 131 8 127 4.34e-23 98.2
Msa0631170 MtrunA17_Chr4g0048511 42.623 122 50 4 30 132 8 128 6.22e-23 97.8
Msa0631170 MtrunA17_Chr4g0022911 34.591 159 65 4 38 180 15 150 6.53e-23 96.7
Msa0631170 MtrunA17_Chr8g0334881 46.078 102 39 2 38 123 12 113 9.33e-23 96.7
Msa0631170 MtrunA17_Chr1g0193801 38.961 154 73 4 38 172 14 165 9.37e-23 97.8
Msa0631170 MtrunA17_Chr4g0013361 43.636 110 46 2 30 123 4 113 1.01e-22 96.3
Msa0631170 MtrunA17_Chr5g0397841 37.500 136 58 2 10 118 69 204 1.02e-22 98.6
Msa0631170 MtrunA17_Chr4g0030881 41.026 117 45 3 38 131 9 124 1.63e-22 94.7
Msa0631170 MtrunA17_Chr5g0395281 44.737 114 42 4 38 131 14 126 4.87e-22 94.4
Msa0631170 MtrunA17_Chr2g0323411 43.363 113 45 3 38 131 14 126 6.22e-22 94.7
Msa0631170 MtrunA17_Chr4g0039971 44.538 119 44 5 33 131 11 127 8.56e-22 94.7
Msa0631170 MtrunA17_Chr5g0410961 45.098 102 41 2 38 124 14 115 1.12e-21 94.0
Msa0631170 MtrunA17_Chr2g0327821 37.762 143 65 4 38 157 8 149 1.29e-21 92.0
Msa0631170 MtrunA17_Chr3g0088461 45.690 116 47 3 25 124 10 125 1.44e-21 94.0
Msa0631170 MtrunA17_Chr1g0152011 37.324 142 72 4 38 163 14 154 1.87e-21 93.6
Msa0631170 MtrunA17_Chr3g0115821 45.714 105 40 3 38 126 14 117 2.75e-21 93.2
Msa0631170 MtrunA17_Chr2g0309911 43.103 116 48 4 28 126 2 116 2.95e-21 92.4
Msa0631170 MtrunA17_Chr1g0180391 45.794 107 41 3 34 124 17 122 6.05e-21 90.1
Msa0631170 MtrunA17_Chr4g0060721 45.098 102 41 2 38 124 15 116 7.23e-21 91.7
Msa0631170 MtrunA17_Chr1g0193371 38.000 150 60 5 38 159 14 158 7.62e-21 92.0
Msa0631170 MtrunA17_Chr3g0117091 41.353 133 60 4 38 153 14 145 8.44e-21 91.7
Msa0631170 MtrunA17_Chr1g0151941 40.833 120 48 4 38 134 14 133 9.20e-21 89.7
Msa0631170 MtrunA17_Chr4g0022901 41.667 108 46 3 38 129 15 121 9.54e-21 90.1
Msa0631170 MtrunA17_Chr1g0154031 47.115 104 38 3 38 125 78 180 9.67e-21 92.4
Msa0631170 MtrunA17_Chr2g0322521 46.296 108 41 3 38 129 31 137 9.96e-21 92.0
Msa0631170 MtrunA17_Chr6g0470971 35.714 168 73 6 38 188 16 165 1.05e-20 90.5
Msa0631170 MtrunA17_Chr4g0058631 44.660 103 40 3 38 124 14 115 1.24e-20 91.3
Msa0631170 MtrunA17_Chr7g0217221 37.762 143 58 5 38 161 14 144 1.29e-20 89.7
Msa0631170 MtrunA17_Chr8g0385321 42.735 117 48 3 38 135 14 130 1.38e-20 90.5
Msa0631170 MtrunA17_Chr7g0270891 43.363 113 45 3 38 131 14 126 1.42e-20 91.3
Msa0631170 MtrunA17_Chr5g0400821 37.162 148 74 4 38 169 14 158 1.66e-20 90.1
Msa0631170 MtrunA17_Chr8g0346561 44.118 102 42 2 38 124 14 115 1.68e-20 90.1
Msa0631170 MtrunA17_Chr8g0342541 45.283 106 40 4 36 124 11 115 2.20e-20 90.5
Msa0631170 MtrunA17_Chr3g0092401 43.137 102 43 2 38 124 15 116 2.55e-20 89.7
Msa0631170 MtrunA17_Chr1g0211161 44.660 103 40 3 38 124 15 116 2.64e-20 88.2
Msa0631170 MtrunA17_Chr2g0328771 45.098 102 41 2 38 124 22 123 2.92e-20 89.7
Msa0631170 MtrunA17_Chr4g0068061 47.059 102 39 2 38 124 14 115 3.08e-20 90.1
Msa0631170 MtrunA17_Chr4g0042671 42.478 113 46 3 38 131 14 126 3.48e-20 90.5
Msa0631170 MtrunA17_Chr7g0228401 50.000 88 30 1 49 122 290 377 3.59e-20 91.3
Msa0631170 MtrunA17_Chr8g0354661 43.925 107 45 2 38 129 39 145 4.01e-20 91.3
Msa0631170 MtrunA17_Chr7g0275911 43.137 102 43 2 38 124 14 115 4.39e-20 88.2
Msa0631170 MtrunA17_Chr8g0342521 42.857 126 52 5 36 142 11 135 4.98e-20 89.4
Msa0631170 MtrunA17_Chr4g0022931 34.591 159 62 6 38 180 15 147 5.74e-20 88.2
Msa0631170 MtrunA17_Chr5g0441131 35.443 158 80 5 38 177 11 164 6.16e-20 85.9
Msa0631170 MtrunA17_Chr8g0349261 43.396 106 42 4 38 126 15 119 6.87e-20 88.2
Msa0631170 MtrunA17_Chr1g0203411 43.137 102 43 2 38 124 14 115 7.98e-20 88.2
Msa0631170 MtrunA17_Chr2g0323351 34.932 146 75 4 38 164 14 158 8.45e-20 87.0
Msa0631170 MtrunA17_Chr6g0453471 42.478 113 46 3 38 131 14 126 9.79e-20 89.0
Msa0631170 MtrunA17_Chr7g0254411 44.660 103 40 3 38 124 14 115 9.84e-20 88.6
Msa0631170 MtrunA17_Chr4g0032401 42.857 112 48 3 29 124 9 120 9.94e-20 88.6
Msa0631170 MtrunA17_Chr3g0080861 43.519 108 44 3 38 129 39 145 1.02e-19 89.7
Msa0631170 MtrunA17_Chr7g0274581 37.405 131 61 3 38 153 14 138 1.14e-19 85.9
Msa0631170 MtrunA17_Chr1g0167691 43.137 102 43 2 38 124 14 115 1.36e-19 86.7
Msa0631170 MtrunA17_Chr1g0186061 40.678 118 46 4 30 124 7 123 1.82e-19 86.3
Msa0631170 MtrunA17_Chr3g0135311 43.396 106 44 3 38 127 14 119 1.94e-19 87.8
Msa0631170 MtrunA17_Chr1g0168661 41.525 118 50 4 26 125 9 125 2.84e-19 85.9
Msa0631170 MtrunA17_Chr1g0203441 42.105 114 49 3 38 135 15 127 2.87e-19 86.3
Msa0631170 MtrunA17_Chr1g0177901 47.191 89 33 1 48 122 4 92 2.99e-19 84.7
Msa0631170 MtrunA17_Chr7g0217741 38.849 139 64 4 38 155 14 152 3.02e-19 86.7
Msa0631170 MtrunA17_Chr5g0435101 41.379 116 52 3 38 137 13 128 3.41e-19 84.7
Msa0631170 MtrunA17_Chr4g0028311 44.660 103 41 3 38 124 14 116 4.11e-19 86.7
Msa0631170 MtrunA17_Chr6g0452271 35.000 140 72 3 38 158 14 153 4.27e-19 86.7
Msa0631170 MtrunA17_Chr1g0187761 42.718 103 42 3 38 124 14 115 4.54e-19 85.5
Msa0631170 MtrunA17_Chr2g0330041 43.396 106 42 4 36 124 11 115 4.76e-19 87.4
Msa0631170 MtrunA17_Chr6g0453211 43.299 97 40 2 38 119 14 110 5.24e-19 86.3
Msa0631170 MtrunA17_Chr8g0342481 42.056 107 44 4 38 127 14 119 6.31e-19 87.0
Msa0631170 MtrunA17_Chr4g0055981 35.714 140 68 5 3 125 25 159 6.52e-19 84.3
Msa0631170 MtrunA17_Chr5g0397231 47.000 100 37 3 36 119 11 110 7.09e-19 86.3
Msa0631170 MtrunA17_Chr2g0327351 47.959 98 35 3 38 119 14 111 7.85e-19 85.9
Msa0631170 MtrunA17_Chr7g0228231 41.584 101 44 2 38 123 16 116 9.30e-19 83.2
Msa0631170 MtrunA17_Chr2g0311221 46.078 102 37 4 35 119 12 112 1.13e-18 85.5
Msa0631170 MtrunA17_Chr7g0233061 40.385 104 46 2 33 122 175 276 1.14e-18 85.9
Msa0631170 MtrunA17_Chr1g0194951 45.098 102 41 2 38 124 14 115 1.22e-18 85.9
Msa0631170 MtrunA17_Chr8g0387421 42.857 105 44 3 36 124 11 115 1.33e-18 85.1
Msa0631170 MtrunA17_Chr6g0450101 41.284 109 48 3 38 131 16 123 1.77e-18 82.8
Msa0631170 MtrunA17_Chr8g0343831 42.157 102 44 2 38 124 10 111 2.16e-18 83.2
Msa0631170 MtrunA17_Chr7g0261281 42.157 102 44 2 38 124 14 115 2.22e-18 84.0
Msa0631170 MtrunA17_Chr1g0209661 36.893 103 50 2 38 125 29 131 2.51e-18 84.3
Msa0631170 MtrunA17_Chr6g0487491 42.857 119 43 5 35 128 10 128 2.60e-18 83.2
Msa0631170 MtrunA17_Chr7g0264641 41.748 103 44 3 38 124 14 116 2.73e-18 83.6
Msa0631170 MtrunA17_Chr1g0192411 42.609 115 50 3 31 129 6 120 3.81e-18 84.7
Msa0631170 MtrunA17_Chr4g0022891 43.564 101 40 3 38 122 14 113 5.26e-18 82.0
Msa0631170 MtrunA17_Chr4g0037141 41.593 113 47 3 38 131 14 126 5.74e-18 82.8
Msa0631170 MtrunA17_Chr1g0194301 42.308 104 43 3 38 125 35 137 6.92e-18 82.4
Msa0631170 MtrunA17_Chr7g0228891 33.333 171 88 7 38 185 14 181 6.94e-18 82.4
Msa0631170 MtrunA17_Chr3g0110351 41.739 115 44 5 38 131 14 126 7.44e-18 82.8
Msa0631170 MtrunA17_Chr3g0121241 40.385 104 47 2 38 126 44 147 1.04e-17 82.4
Msa0631170 MtrunA17_Chr4g0044421 39.831 118 53 4 36 136 12 128 1.14e-17 80.1
Msa0631170 MtrunA17_Chr4g0022881 42.991 107 43 4 33 123 10 114 1.22e-17 80.9
Msa0631170 MtrunA17_Chr4g0057031 38.261 115 50 4 38 132 14 127 1.82e-17 81.3
Msa0631170 MtrunA17_Chr7g0220341 36.090 133 67 5 20 135 10 141 1.99e-17 80.9
Msa0631170 MtrunA17_Chr4g0054391 45.361 97 37 3 38 118 14 110 2.29e-17 81.3
Msa0631170 MtrunA17_Chr5g0434571 40.870 115 45 5 38 131 50 162 2.36e-17 82.0
Msa0631170 MtrunA17_Chr7g0271241 37.241 145 70 4 38 162 14 157 2.50e-17 82.0
Msa0631170 MtrunA17_Chr4g0070611 38.393 112 53 3 38 134 14 124 3.39e-17 80.9
Msa0631170 MtrunA17_Chr4g0072751 45.918 98 37 3 38 119 14 111 3.48e-17 81.3
Msa0631170 MtrunA17_Chr5g0440781 41.176 102 44 3 38 123 14 115 5.11e-17 78.2
Msa0631170 MtrunA17_Chr4g0070641 38.393 112 53 3 38 134 14 124 6.01e-17 77.4
Msa0631170 MtrunA17_Chr1g0194291 40.367 109 49 3 26 119 12 119 6.79e-17 79.3
Msa0631170 MtrunA17_Chr8g0362231 32.836 134 73 3 27 144 9 141 7.78e-17 80.9
Msa0631170 MtrunA17_Chr3g0131121 40.196 102 46 2 38 124 14 115 7.94e-17 79.7
Msa0631170 MtrunA17_Chr5g0416341 35.354 99 50 1 41 125 29 127 1.34e-16 80.5
Msa0631170 MtrunA17_Chr5g0440761 41.176 102 44 3 38 123 14 115 1.60e-16 78.2
Msa0631170 MtrunA17_Chr5g0441141 41.176 102 44 3 38 123 14 115 1.86e-16 78.2
Msa0631170 MtrunA17_Chr5g0434841 39.423 104 48 3 38 126 22 125 3.58e-16 78.2
Msa0631170 MtrunA17_Chr5g0434831 37.500 104 50 2 38 126 9 112 4.66e-16 75.5
Msa0631170 MtrunA17_Chr5g0434911 37.500 104 50 3 38 126 23 126 6.84e-16 76.6
Msa0631170 MtrunA17_Chr7g0247131 49.351 77 23 2 64 124 5 81 7.81e-16 76.3
Msa0631170 MtrunA17_Chr5g0434931 36.538 104 51 3 38 126 37 140 1.15e-15 76.3
Msa0631170 MtrunA17_Chr7g0269831 41.525 118 49 3 38 135 14 131 1.45e-15 76.6
Msa0631170 MtrunA17_Chr7g0240821 37.931 116 52 5 41 139 6 118 1.63e-15 74.7
Msa0631170 MtrunA17_Chr7g0228991 36.538 104 51 3 38 126 31 134 8.71e-15 73.6
Msa0631170 MtrunA17_Chr2g0293911 36.893 103 50 2 38 125 26 128 1.17e-14 73.9
Msa0631170 MtrunA17_Chr7g0233151 65.116 43 15 0 82 124 9 51 2.43e-14 70.1
Msa0631170 MtrunA17_Chr8g0360111 35.238 105 53 2 32 121 21 125 4.80e-14 71.2
Msa0631170 MtrunA17_Chr4g0068921 36.634 101 49 2 38 123 26 126 5.46e-14 69.7
Msa0631170 MtrunA17_Chr3g0099141 43.373 83 32 2 38 105 42 124 1.10e-13 67.4
Msa0631170 MtrunA17_Chr3g0093811 40.426 94 35 3 71 143 18 111 1.72e-13 69.7
Msa0631170 MtrunA17_Chr7g0238651 35.294 102 49 2 33 117 2 103 1.60e-12 67.8
Msa0631170 MtrunA17_Chr3g0104491 56.818 44 19 0 82 125 25 68 1.88e-12 67.0
Msa0631170 MtrunA17_Chr3g0104501 38.710 93 45 2 1 85 92 180 6.14e-12 63.9
Msa0631170 MtrunA17_Chr5g0421201 59.524 42 17 0 82 123 18 59 3.81e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0631170 AT3G09230.1 47.734 331 144 7 25 333 43 366 2.51e-88 270
Msa0631170 AT3G55730.1 41.622 370 165 10 1 324 1 365 8.38e-77 241
Msa0631170 AT2G39880.1 37.798 336 148 11 12 319 24 326 1.25e-54 183
Msa0631170 AT4G37260.1 43.814 194 78 4 36 205 11 197 4.98e-37 135
Msa0631170 AT5G67300.1 59.091 110 30 2 36 131 4 112 1.13e-36 134
Msa0631170 AT3G50060.1 60.185 108 29 1 36 129 4 111 3.65e-36 132
Msa0631170 AT2G23290.1 56.098 123 39 2 36 144 11 132 5.33e-36 132
Msa0631170 AT1G17950.1 43.262 141 59 2 38 157 5 145 2.43e-31 118
Msa0631170 AT5G17800.1 46.457 127 52 2 14 124 67 193 9.77e-30 116
Msa0631170 AT1G69560.1 47.273 110 44 1 29 124 98 207 1.87e-29 115
Msa0631170 AT1G69560.2 47.273 110 44 1 29 124 114 223 2.06e-29 115
Msa0631170 AT4G33450.1 50.495 101 36 1 38 124 19 119 1.96e-28 110
Msa0631170 AT1G73410.1 51.485 101 35 2 38 124 6 106 5.13e-28 109
Msa0631170 AT1G26780.1 49.505 101 37 1 38 124 98 198 5.13e-28 110
Msa0631170 AT5G58850.1 48.598 107 41 1 32 124 99 205 7.13e-28 113
Msa0631170 AT1G73410.2 51.485 101 35 2 38 124 6 106 7.39e-28 108
Msa0631170 AT1G26780.2 49.505 101 37 1 38 124 98 198 7.84e-28 111
Msa0631170 AT4G18770.1 47.706 109 43 1 30 124 209 317 2.21e-27 111
Msa0631170 AT5G02320.3 40.816 147 62 2 37 169 66 201 2.29e-27 112
Msa0631170 AT3G09370.1 49.020 102 38 1 37 124 129 230 2.36e-27 112
Msa0631170 AT5G02320.1 40.816 147 62 2 37 169 126 261 2.40e-27 112
Msa0631170 AT5G02320.2 40.816 147 62 2 37 169 126 261 2.40e-27 112
Msa0631170 AT3G09370.2 49.020 102 38 1 37 124 134 235 2.54e-27 112
Msa0631170 AT3G09370.3 49.020 102 38 1 37 124 142 243 3.09e-27 112
Msa0631170 AT3G27785.1 49.524 105 39 1 34 124 185 289 5.68e-27 110
Msa0631170 AT5G11510.3 43.137 102 44 1 37 124 80 181 1.53e-26 110
Msa0631170 AT5G11510.1 43.137 102 44 1 37 124 80 181 1.53e-26 110
Msa0631170 AT5G11510.4 43.137 102 44 1 37 124 80 181 1.53e-26 110
Msa0631170 AT5G11510.5 43.137 102 44 1 37 124 80 181 2.12e-26 110
Msa0631170 AT5G11510.2 43.137 102 44 1 37 124 80 181 2.18e-26 110
Msa0631170 AT4G32730.5 45.098 102 42 1 37 124 86 187 7.91e-26 108
Msa0631170 AT4G32730.4 45.098 102 42 1 37 124 86 187 7.91e-26 108
Msa0631170 AT4G32730.3 45.098 102 42 1 37 124 86 187 7.91e-26 108
Msa0631170 AT4G32730.2 45.098 102 42 1 37 124 86 187 7.91e-26 108
Msa0631170 AT5G11050.1 46.602 103 41 1 37 125 104 206 9.72e-26 107
Msa0631170 AT4G32730.1 45.098 102 42 1 37 124 86 187 1.14e-25 108
Msa0631170 AT5G40360.1 47.000 100 39 1 38 123 158 257 1.31e-25 105
Msa0631170 AT3G29020.1 46.535 101 40 1 38 124 65 165 4.04e-24 99.0
Msa0631170 AT3G29020.2 46.535 101 40 1 38 124 67 167 4.92e-24 100
Msa0631170 AT4G05100.1 44.628 121 47 4 30 131 8 127 9.24e-24 100
Msa0631170 AT5G59780.3 44.231 104 41 3 38 125 10 112 1.85e-23 97.4
Msa0631170 AT3G46130.1 45.192 104 40 3 38 125 11 113 2.66e-23 97.4
Msa0631170 AT4G28110.1 44.248 113 44 3 38 131 14 126 6.13e-23 97.1
Msa0631170 AT2G32460.1 44.275 131 51 5 15 129 2 126 6.61e-23 99.4
Msa0631170 AT3G53200.1 48.544 103 36 3 38 124 11 112 7.12e-23 95.9
Msa0631170 AT3G11440.2 45.794 107 43 2 38 129 43 149 1.02e-22 99.0
Msa0631170 AT3G11440.3 45.794 107 43 2 38 129 43 149 2.60e-22 98.2
Msa0631170 AT3G11440.4 45.794 107 43 2 38 129 43 149 2.60e-22 98.2
Msa0631170 AT3G11440.1 45.794 107 43 2 38 129 43 149 2.60e-22 98.2
Msa0631170 AT2G32460.2 46.296 108 41 3 38 129 8 114 3.21e-22 97.4
Msa0631170 AT1G18570.1 45.133 113 43 3 38 131 15 127 3.80e-22 95.9
Msa0631170 AT5G14750.1 37.931 145 72 4 28 157 9 150 4.51e-22 92.8
Msa0631170 AT4G26930.1 42.373 118 53 2 27 129 10 127 4.79e-22 96.3
Msa0631170 AT5G06100.1 45.794 107 43 2 38 129 34 140 7.94e-22 96.3
Msa0631170 AT5G56110.1 37.324 142 70 3 38 160 14 155 1.02e-21 94.4
Msa0631170 AT3G30210.1 39.259 135 64 4 38 155 29 162 1.05e-21 93.6
Msa0631170 AT5G06100.5 45.794 107 43 2 38 129 34 140 1.43e-21 95.9
Msa0631170 AT5G06100.2 45.794 107 43 2 38 129 34 140 1.43e-21 95.9
Msa0631170 AT5G06100.3 45.794 107 43 2 38 129 34 140 1.43e-21 95.9
Msa0631170 AT5G06100.4 45.794 107 43 2 38 129 34 140 1.43e-21 95.9
Msa0631170 AT3G48920.1 42.478 113 49 3 38 135 20 131 2.06e-21 92.4
Msa0631170 AT4G21440.1 43.363 113 45 3 38 131 14 126 2.16e-21 94.0
Msa0631170 AT2G25230.1 42.000 100 44 1 38 123 26 125 2.86e-21 91.3
Msa0631170 AT3G12720.1 45.631 103 39 3 38 124 24 125 3.19e-21 92.8
Msa0631170 AT4G01680.3 44.737 114 42 4 38 131 14 126 3.25e-21 91.3
Msa0631170 AT1G79180.1 47.170 106 40 3 35 124 12 117 3.91e-21 92.0
Msa0631170 AT5G26660.1 39.474 152 63 6 38 166 14 159 4.53e-21 92.8
Msa0631170 AT3G60460.1 44.118 102 41 2 38 123 13 114 4.73e-21 92.0
Msa0631170 AT2G47190.1 46.154 104 39 3 38 125 22 124 5.08e-21 91.3
Msa0631170 AT3G61250.1 44.660 103 40 3 38 124 14 115 5.09e-21 92.0
Msa0631170 AT5G62470.1 36.000 150 77 3 38 169 14 162 5.61e-21 92.8
Msa0631170 AT4G01680.1 44.737 114 42 4 38 131 14 126 5.72e-21 92.4
Msa0631170 AT5G15310.4 39.286 140 63 4 38 155 14 153 7.99e-21 90.5
Msa0631170 AT4G00540.2 45.192 104 40 2 38 124 103 206 8.54e-21 92.8
Msa0631170 AT5G57620.1 44.340 106 43 3 38 127 14 119 8.76e-21 92.0
Msa0631170 AT5G15310.1 40.152 132 57 4 38 147 14 145 9.86e-21 91.7
Msa0631170 AT5G15310.2 39.286 140 63 4 38 155 14 153 1.24e-20 91.3
Msa0631170 AT4G17785.2 44.737 114 44 3 38 132 15 128 1.42e-20 91.7
Msa0631170 AT4G17785.1 44.737 114 44 3 38 132 15 128 1.43e-20 91.7
Msa0631170 AT3G23250.1 44.118 102 42 2 38 124 14 115 1.44e-20 90.5
Msa0631170 AT5G07690.1 43.363 113 45 3 38 131 14 126 1.50e-20 91.3
Msa0631170 AT3G08500.1 41.667 132 58 3 8 124 6 133 1.59e-20 91.3
Msa0631170 AT5G55020.1 45.545 101 40 2 38 123 28 128 1.78e-20 92.4
Msa0631170 AT3G01140.2 43.089 123 49 4 38 139 14 136 2.08e-20 90.9
Msa0631170 AT5G65230.1 44.762 105 41 3 38 126 14 117 2.10e-20 90.5
Msa0631170 AT4G00540.1 45.192 104 40 2 38 124 101 204 2.13e-20 92.0
Msa0631170 AT1G74650.1 44.231 104 43 2 38 126 14 117 2.35e-20 90.5
Msa0631170 AT1G74430.1 41.463 123 53 3 38 141 14 136 2.63e-20 89.4
Msa0631170 AT5G60890.1 44.248 113 44 3 38 131 14 126 2.65e-20 89.7
Msa0631170 AT3G01140.1 43.089 123 49 4 38 139 57 179 3.20e-20 90.9
Msa0631170 AT5G07700.1 43.363 113 45 3 38 131 14 126 3.49e-20 90.1
Msa0631170 AT5G07700.2 43.363 113 45 3 38 131 14 126 3.49e-20 90.1
Msa0631170 AT3G02940.2 41.593 113 47 3 38 131 14 126 3.87e-20 89.7
Msa0631170 AT3G02940.1 41.593 113 47 3 38 131 14 126 4.74e-20 89.7
Msa0631170 AT3G02940.3 41.593 113 47 3 38 131 14 126 4.74e-20 89.7
Msa0631170 AT1G56160.1 43.925 107 42 4 35 124 12 117 5.17e-20 89.0
Msa0631170 AT5G23000.1 46.729 107 40 4 35 124 10 116 7.66e-20 89.0
Msa0631170 AT1G57560.1 42.982 114 44 4 38 131 14 126 1.09e-19 88.6
Msa0631170 AT5G39700.1 33.846 130 71 2 9 123 26 155 1.10e-19 85.9
Msa0631170 AT5G10280.1 41.905 105 44 3 38 126 14 117 1.10e-19 88.6
Msa0631170 AT1G57560.2 42.982 114 44 4 38 131 14 126 1.17e-19 87.8
Msa0631170 AT5G12870.1 45.098 102 41 2 38 124 20 121 1.25e-19 87.8
Msa0631170 AT4G25560.1 42.857 105 43 3 38 126 12 115 1.25e-19 87.8
Msa0631170 AT1G34670.1 38.129 139 67 3 38 157 14 152 1.44e-19 89.0
Msa0631170 AT5G54230.1 41.593 113 47 3 38 131 14 126 1.77e-19 87.8
Msa0631170 AT5G62470.2 36.424 151 76 4 38 169 14 163 1.93e-19 88.2
Msa0631170 AT3G28910.1 42.453 106 46 2 34 124 10 115 2.13e-19 87.8
Msa0631170 AT1G63910.1 44.762 105 42 3 36 124 11 115 2.14e-19 88.6
Msa0631170 AT1G08810.1 37.063 143 68 4 38 159 14 155 2.37e-19 87.0
Msa0631170 AT5G61420.2 43.363 113 45 3 38 131 14 126 2.76e-19 88.2
Msa0631170 AT1G06180.1 47.115 104 36 4 38 124 14 115 2.89e-19 85.9
Msa0631170 AT4G22680.1 39.516 124 54 4 38 141 14 136 2.92e-19 86.3
Msa0631170 AT4G01680.2 40.476 126 42 4 38 131 14 138 2.93e-19 87.8
Msa0631170 AT2G31180.1 42.157 102 44 2 38 124 14 115 3.40e-19 85.9
Msa0631170 AT4G37780.1 45.631 103 40 3 38 124 14 116 3.52e-19 87.0
Msa0631170 AT5G52600.1 43.243 111 45 4 30 124 7 115 3.71e-19 84.7
Msa0631170 AT5G16770.4 41.593 113 47 3 38 131 14 126 3.89e-19 87.0
Msa0631170 AT5G16770.3 41.593 113 47 3 38 131 14 126 3.89e-19 87.0
Msa0631170 AT3G01530.1 43.396 106 43 3 34 123 23 127 3.92e-19 84.7
Msa0631170 AT3G47600.1 43.137 102 43 2 38 124 14 115 3.94e-19 87.0
Msa0631170 AT5G16770.1 41.593 113 47 3 38 131 14 126 4.28e-19 87.0
Msa0631170 AT5G16770.2 41.593 113 47 3 38 131 14 126 4.28e-19 87.0
Msa0631170 AT3G27920.1 40.000 105 48 2 38 127 16 120 4.63e-19 85.1
Msa0631170 AT1G25340.1 38.053 113 53 3 29 125 11 122 4.63e-19 86.3
Msa0631170 AT1G74080.1 42.478 113 46 3 38 131 14 126 5.43e-19 86.7
Msa0631170 AT1G09540.1 44.737 114 42 4 38 131 14 126 5.52e-19 87.0
Msa0631170 AT2G26960.1 30.263 228 111 7 35 232 19 228 5.88e-19 87.8
Msa0631170 AT3G13890.2 42.857 105 44 3 36 124 11 115 6.29e-19 87.0
Msa0631170 AT5G40330.1 38.596 114 54 3 30 127 6 119 7.09e-19 84.3
Msa0631170 AT1G25340.2 36.937 111 52 2 29 125 11 117 7.18e-19 85.5
Msa0631170 AT2G02820.3 38.384 99 47 1 41 125 33 131 7.27e-19 86.3
Msa0631170 AT1G22640.1 42.157 102 44 2 38 124 14 115 7.37e-19 85.1
Msa0631170 AT2G02820.1 38.384 99 47 1 41 125 33 131 8.33e-19 87.4
Msa0631170 AT2G02820.2 38.384 99 47 1 41 125 33 131 8.82e-19 87.4
Msa0631170 AT1G25340.3 36.607 112 53 2 28 125 10 117 1.03e-18 85.5
Msa0631170 AT1G18710.1 41.228 114 48 3 38 132 14 127 1.24e-18 84.7
Msa0631170 AT5G49330.1 44.118 102 42 2 38 124 14 115 1.40e-18 85.9
Msa0631170 AT3G13540.1 40.650 123 52 4 38 141 25 145 1.51e-18 84.0
Msa0631170 AT3G24310.1 43.689 103 41 3 38 124 20 121 1.88e-18 84.3
Msa0631170 AT5G35550.1 42.157 102 44 2 38 124 16 117 1.88e-18 84.0
Msa0631170 AT4G38620.1 41.593 113 47 3 38 131 14 126 2.08e-18 84.3
Msa0631170 AT3G28470.1 42.478 113 46 3 38 131 14 126 2.15e-18 84.7
Msa0631170 AT3G49690.1 43.810 105 43 3 38 126 14 118 2.78e-18 84.3
Msa0631170 AT5G52260.1 39.831 118 54 3 25 126 1 117 2.80e-18 83.6
Msa0631170 AT5G65790.1 44.660 103 41 3 38 124 14 116 2.93e-18 85.1
Msa0631170 AT3G27810.1 42.574 101 43 2 38 123 22 122 3.82e-18 82.4
Msa0631170 AT3G13890.1 41.228 114 42 4 36 124 11 124 4.26e-18 84.7
Msa0631170 AT1G35515.1 41.176 102 45 2 38 124 14 115 4.36e-18 82.0
Msa0631170 AT2G16720.1 41.176 102 45 2 38 124 14 115 4.93e-18 83.2
Msa0631170 AT5G40350.1 41.346 104 46 2 38 126 19 122 7.32e-18 81.3
Msa0631170 AT1G66230.1 41.739 115 44 5 38 131 14 126 8.64e-18 82.4
Msa0631170 AT2G26950.1 39.640 111 43 4 37 127 17 123 8.87e-18 84.0
Msa0631170 AT1G16490.1 44.340 106 43 3 35 124 12 117 1.03e-17 82.4
Msa0631170 AT5G16600.1 43.478 115 42 5 38 131 14 126 1.12e-17 82.8
Msa0631170 AT4G13480.1 41.748 103 43 3 38 124 8 109 1.28e-17 81.6
Msa0631170 AT4G34990.1 42.157 102 44 2 38 124 14 115 1.40e-17 82.0
Msa0631170 AT4G12350.1 39.806 103 45 3 38 124 14 115 1.43e-17 82.0
Msa0631170 AT1G14350.2 36.364 99 49 1 41 125 28 126 1.50e-17 83.6
Msa0631170 AT1G14350.1 36.364 99 49 1 41 125 28 126 1.50e-17 83.6
Msa0631170 AT4G09460.1 43.137 102 43 2 38 124 14 115 1.89e-17 80.9
Msa0631170 AT5G40430.1 31.618 136 71 3 9 123 18 152 2.63e-17 80.9
Msa0631170 AT2G47460.1 44.118 102 42 2 38 124 14 115 3.05e-17 82.0
Msa0631170 AT1G68320.1 37.500 104 48 3 38 125 21 123 3.22e-17 80.9
Msa0631170 AT3G12820.1 40.952 105 45 3 38 126 16 119 4.48e-17 79.7
Msa0631170 AT2G36890.1 42.593 108 46 3 38 129 14 121 7.75e-17 80.1
Msa0631170 AT1G79180.2 36.691 139 39 4 35 124 12 150 7.93e-17 80.5
Msa0631170 AT2G36890.2 42.593 108 46 3 38 129 55 162 7.98e-17 80.5
Msa0631170 AT3G62610.1 44.118 102 42 2 38 124 14 115 1.26e-16 80.1
Msa0631170 AT1G48000.1 39.604 101 46 2 38 123 34 134 4.16e-16 77.0
Msa0631170 AT3G53200.2 52.941 68 18 1 71 124 12 79 6.33e-16 75.9
Msa0631170 AT1G66370.1 31.515 165 79 5 29 166 2 159 8.41e-16 76.3
Msa0631170 AT5G14340.1 39.423 104 44 4 38 124 26 127 8.63e-16 76.6
Msa0631170 AT5G26660.2 40.171 117 44 4 71 166 17 128 1.59e-15 76.6
Msa0631170 AT5G14750.3 37.624 101 47 2 71 157 18 116 2.57e-15 73.2
Msa0631170 AT5G62320.1 33.125 160 66 7 38 170 15 160 7.42e-15 73.6
Msa0631170 AT5G49620.1 38.614 101 47 2 38 123 28 128 2.84e-14 72.8
Msa0631170 AT5G35550.2 50.000 68 20 1 71 124 53 120 3.44e-14 72.0
Msa0631170 AT3G06490.1 38.235 102 46 3 38 123 21 121 3.72e-14 72.8
Msa0631170 AT5G59780.2 45.588 68 23 1 71 124 23 90 9.38e-14 69.7
Msa0631170 AT3G46130.3 44.928 69 24 1 71 125 13 81 1.62e-13 69.3
Msa0631170 AT1G56650.1 36.364 110 55 2 30 124 2 111 1.90e-13 69.7
Msa0631170 AT3G46130.4 44.928 69 24 1 71 125 23 91 1.97e-13 69.3
Msa0631170 AT1G66380.1 36.364 110 55 3 30 124 2 111 3.55e-13 66.6
Msa0631170 AT1G66390.1 36.364 110 55 2 30 124 2 111 9.80e-13 67.4
Msa0631170 AT3G12820.2 45.714 70 24 1 71 126 2 71 1.90e-12 65.9
Msa0631170 AT3G27810.2 46.269 67 22 1 71 123 7 73 5.81e-12 63.9
Msa0631170 AT5G40350.2 44.286 70 25 1 71 126 8 77 1.55e-11 62.8
Msa0631170 AT3G47600.2 44.118 68 24 1 71 124 42 109 1.95e-11 64.7
Msa0631170 AT5G14750.4 38.158 76 45 1 82 157 16 89 2.00e-11 61.6
Msa0631170 AT5G14750.2 38.158 76 45 1 82 157 16 89 2.00e-11 61.6
Msa0631170 AT1G18960.1 33.333 117 60 4 32 131 4 119 2.42e-11 64.3
Msa0631170 AT5G49620.2 33.333 117 49 3 38 125 28 144 4.40e-11 63.5

Find 109 sgRNAs with CRISPR-Local

Find 491 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTTCCGCATCTGATTT+TGG 0.155153 4_3:-13811149 None:intergenic
TTGATTGCTCGTGGAATTTC+TGG 0.157255 4_3:+13806068 Msa0631170:CDS
TGTAATAATGAATATGAATT+CGG 0.286689 4_3:+13811559 Msa0631170:three_prime_UTR
CACGTGCTACTGGCTTAAAA+AGG 0.288338 4_3:-13811031 None:intergenic
CTGAGAATGGCGTCTTCTTC+AGG 0.289480 4_3:-13806008 None:intergenic
ACTCTGAGGCGTCGAGGAAT+TGG 0.291399 4_3:+13810780 Msa0631170:CDS
TACGAATTTGTTTGCTACTA+AGG 0.311407 4_3:-13811520 None:intergenic
AGAGTTGGTGGTTGTTGTTC+TGG 0.316358 4_3:-13805888 None:intergenic
TGGTCCCAACAAAGAGCTTT+TGG 0.322656 4_3:-13811255 None:intergenic
CTCTGAGGCGTCGAGGAATT+GGG 0.329462 4_3:+13810781 Msa0631170:CDS
AGAATTCCAGTGGTTCTTAA+TGG 0.336432 4_3:-13810757 None:intergenic
GTCAGTTCGGTGCTAGAAAC+TGG 0.340339 4_3:+13806042 Msa0631170:CDS
AGGAAGAGATGTTAGTTCTA+TGG 0.342770 4_3:+13810932 Msa0631170:CDS
CCTTGCATTGGAACAGGTCT+TGG 0.356777 4_3:-13811110 None:intergenic
ATGGCATTATCTGTTCTTCC+TGG 0.361429 4_3:-13810738 None:intergenic
TTCAATTATACCATGAAGTC+AGG 0.372730 4_3:+13810997 Msa0631170:CDS
TGGCTGCCCATTTGTTTCCA+TGG 0.388447 4_3:-13810701 None:intergenic
AGTTTCTTCAGATGATGCTT+TGG 0.397065 4_3:-13810871 None:intergenic
CAACTCCAAAAGCTCTTTGT+TGG 0.403606 4_3:+13811250 Msa0631170:CDS
AAAAGAGGGCAAATCTTAAT+GGG 0.412294 4_3:+13811472 Msa0631170:three_prime_UTR
CTGGCAGGGTTAATATCTAA+TGG 0.414064 4_3:+13811411 Msa0631170:CDS
ATGCAATCCATGGAAACAAA+TGG 0.418432 4_3:+13810694 Msa0631170:CDS
GTAATAATGAATATGAATTC+GGG 0.420141 4_3:+13811560 Msa0631170:three_prime_UTR
AACTCCAAAAGCTCTTTGTT+GGG 0.427043 4_3:+13811251 Msa0631170:CDS
AATGCGTATAACGCTTTCAA+TGG 0.428676 4_3:+13811065 Msa0631170:CDS
GGAAGTCGTGCCGGCTCCGA+TGG 0.433047 4_3:+13806099 Msa0631170:CDS
CATCCATGACCACACTGATT+AGG 0.440165 4_3:-13811209 None:intergenic
CGTGGAATTTCTGGAAGATC+GGG 0.442466 4_3:+13806077 Msa0631170:CDS
TCAAAACTTGTGAAAGATTG+AGG 0.443078 4_3:-13811299 None:intergenic
TGCTTGGCTTAAAAGTGGAT+TGG 0.445450 4_3:+13811355 Msa0631170:CDS
CAGACATTAGTAACCTTGCT+TGG 0.447221 4_3:+13811339 Msa0631170:CDS
GCATAATTATAAGACTCAAT+TGG 0.449705 4_3:+13811624 Msa0631170:three_prime_UTR
ATAGGTCCTTGCATTGGAAC+AGG 0.451041 4_3:-13811116 None:intergenic
TCGGTGGATCCCTGACTTCA+TGG 0.451649 4_3:-13811007 None:intergenic
CATGGATGCTGCTCATCTCT+TGG 0.452941 4_3:+13811224 Msa0631170:CDS
TGGAGCTGATGTTGAAGGTT+GGG 0.455620 4_3:-13811090 None:intergenic
AGTCGTCTTGTTAGTCAGTT+CGG 0.460173 4_3:+13806029 Msa0631170:CDS
AACCTTGCTTGGCTTAAAAG+TGG 0.461055 4_3:+13811350 Msa0631170:CDS
GACGAAGGTTTAGCCGCATT+AGG 0.461626 4_3:+13805936 Msa0631170:CDS
AATGGATCATGATTACATAC+TGG 0.465910 4_3:+13811429 Msa0631170:exon
AGTTAGAATCTAGTAACATA+GGG 0.472184 4_3:+13810826 Msa0631170:CDS
TCTGAATATTCAATGAAGTC+TGG 0.473030 4_3:-13811275 None:intergenic
GAACAGCAGCGTCAAAATGA+TGG 0.474378 4_3:+13811379 Msa0631170:CDS
AGAGACTTATATTTAGAGAC+GGG 0.482857 4_3:-13811655 None:intergenic
TCGTGGAATTTCTGGAAGAT+CGG 0.489928 4_3:+13806076 Msa0631170:CDS
AAAGCACTTACACGTGCTAC+TGG 0.500174 4_3:-13811041 None:intergenic
TGCAATCCATGGAAACAAAT+GGG 0.500748 4_3:+13810695 Msa0631170:CDS
GGTCTTGGAGCTGATGTTGA+AGG 0.503260 4_3:-13811095 None:intergenic
TTAGTAGCAAACAAATTCGT+AGG 0.508010 4_3:+13811522 Msa0631170:three_prime_UTR
AAGTTAGAATCTAGTAACAT+AGG 0.508021 4_3:+13810825 Msa0631170:CDS
TCGTGCACCGCCGTGAGAGT+TGG 0.511514 4_3:-13805903 None:intergenic
TGTTAGTTCTATGGAGATTG+TGG 0.514093 4_3:+13810941 Msa0631170:CDS
ACGGCGGTGCACGACGGAAG+CGG 0.521070 4_3:+13805912 Msa0631170:CDS
ACTAACAAGACGACTGAGAA+TGG 0.521928 4_3:-13806021 None:intergenic
ACAAATGGGCAGCCATTGCT+AGG 0.523613 4_3:+13810709 Msa0631170:CDS
GTGCCTAATCAGTGTGGTCA+TGG 0.526372 4_3:+13811206 Msa0631170:CDS
AACTGGAGTTTGATTGCTCG+TGG 0.529814 4_3:+13806059 Msa0631170:CDS
TGCACCGCCGTGAGAGTTGG+TGG 0.533257 4_3:-13805900 None:intergenic
GAAGATCGGGGAAGTCGTGC+CGG 0.535316 4_3:+13806090 Msa0631170:CDS
TGACATTATGCACATCCATC+CGG 0.536843 4_3:-13811496 None:intergenic
GCATTAGGCGAAGGCGGCGA+AGG 0.538199 4_3:+13805951 Msa0631170:CDS
GCCATTGCTAGGCTTCTGCC+AGG 0.547052 4_3:+13810720 Msa0631170:CDS
TTGAGTCTTATAATTATGCA+TGG 0.547189 4_3:-13811620 None:intergenic
AGGGCAAATCTTAATGGGAC+CGG 0.547683 4_3:+13811477 Msa0631170:three_prime_UTR
TTGGAGCTGATGTTGAAGGT+TGG 0.548448 4_3:-13811091 None:intergenic
TCATGATTACATACTGGCTA+TGG 0.548697 4_3:+13811435 Msa0631170:three_prime_UTR
AAGAGACTTATATTTAGAGA+CGG 0.551311 4_3:-13811656 None:intergenic
TCTGAGGCGTCGAGGAATTG+GGG 0.551690 4_3:+13810782 Msa0631170:CDS
TGTAAAATAGGTCCTTGCAT+TGG 0.557114 4_3:-13811122 None:intergenic
ATAATGCCATTAAGAACCAC+TGG 0.559681 4_3:+13810751 Msa0631170:CDS
GCTGATTACACCATCGGAGC+CGG 0.561787 4_3:-13806109 None:intergenic
GGTTTAGCCGCATTAGGCGA+AGG 0.563573 4_3:+13805942 Msa0631170:CDS
TAGTAGCAAACAAATTCGTA+GGG 0.563850 4_3:+13811523 Msa0631170:three_prime_UTR
CACACTGATTAGGCACTGAC+CGG 0.565218 4_3:-13811199 None:intergenic
GTTGCTGCTCATGCAATCCA+TGG 0.567764 4_3:+13810684 Msa0631170:CDS
AACAGCAGCGTCAAAATGAT+GGG 0.573995 4_3:+13811380 Msa0631170:CDS
CATGAGCAGCAACTATGATC+CGG 0.578076 4_3:-13810674 None:intergenic
TGATGGGTGATACTGCTGGC+AGG 0.579980 4_3:+13811396 Msa0631170:CDS
ACTAACATCTCTTCCTTCTG+AGG 0.583130 4_3:-13810925 None:intergenic
CCAAGACCTGTTCCAATGCA+AGG 0.588737 4_3:+13811110 Msa0631170:CDS
CTGAGGCGTCGAGGAATTGG+GGG 0.591911 4_3:+13810783 Msa0631170:CDS
AATTCTTTGAAATCCTCAGA+AGG 0.603835 4_3:+13810912 Msa0631170:CDS
GATCAAGCTGATTACACCAT+CGG 0.607608 4_3:-13806115 None:intergenic
AGTAGCGGTAGCAAAGTGAA+AGG 0.608608 4_3:+13805975 Msa0631170:CDS
ACAACAACCACCAACTCTCA+CGG 0.609856 4_3:+13805893 Msa0631170:CDS
TCCTGGCAGAAGCCTAGCAA+TGG 0.610263 4_3:-13810721 None:intergenic
CAAATCTTAATGGGACCGGA+TGG 0.610291 4_3:+13811481 Msa0631170:three_prime_UTR
ACATTCACCAAAATCAGATG+CGG 0.614421 4_3:+13811142 Msa0631170:CDS
TCTGAAGAAACTCTATCATG+TGG 0.617207 4_3:+13810882 Msa0631170:CDS
TTCGCCGCCTTCGCCTAATG+CGG 0.619488 4_3:-13805949 None:intergenic
GTAGCAAAGTGAAAGGACCT+TGG 0.631627 4_3:+13805982 Msa0631170:CDS
CACGACGGAAGCGGTGACGA+AGG 0.634186 4_3:+13805921 Msa0631170:CDS
TTAACAGAACTATTGTCGAC+CGG 0.637825 4_3:+13811180 Msa0631170:CDS
GAAGGCGGCGAAGGAAGTAG+CGG 0.640817 4_3:+13805960 Msa0631170:CDS
TCAATTATACCATGAAGTCA+GGG 0.645491 4_3:+13810998 Msa0631170:CDS
GTTAGAATCTAGTAACATAG+GGG 0.647452 4_3:+13810827 Msa0631170:CDS
GAGACTTATATTTAGAGACG+GGG 0.655340 4_3:-13811654 None:intergenic
GCCTCAGAGTAGAATTCCAG+TGG 0.656534 4_3:-13810767 None:intergenic
ACTCTCACGGCGGTGCACGA+CGG 0.656704 4_3:+13805906 Msa0631170:CDS
TTAGCCGCATTAGGCGAAGG+CGG 0.661776 4_3:+13805945 Msa0631170:CDS
AAAATGATGGGTGATACTGC+TGG 0.663087 4_3:+13811392 Msa0631170:CDS
GATGGGTGATACTGCTGGCA+GGG 0.665213 4_3:+13811397 Msa0631170:CDS
GCGTCTTCTTCAGGAGACCA+AGG 0.675143 4_3:-13805999 None:intergenic
AATTCTACTCTGAGGCGTCG+AGG 0.676063 4_3:+13810774 Msa0631170:CDS
TTAGAATCTAGTAACATAGG+GGG 0.681974 4_3:+13810828 Msa0631170:CDS
ACCACTGGAATTCTACTCTG+AGG 0.701771 4_3:+13810766 Msa0631170:CDS
GTGGAATTTCTGGAAGATCG+GGG 0.703083 4_3:+13806078 Msa0631170:CDS
CGGTCAGTGCCTAATCAGTG+TGG 0.713190 4_3:+13811200 Msa0631170:CDS
ACAACCACCAACTCTCACGG+CGG 0.782687 4_3:+13805896 Msa0631170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCGTTAAAAAAAAAATAATT+AGG + chr4_3:13806430-13806449 Msa0631170:intron 10.0%
!! CGTTAAAAAAAAAATAATTA+GGG + chr4_3:13806431-13806450 Msa0631170:intron 10.0%
!! GAAACATAAAAAATATATTT+AGG + chr4_3:13806737-13806756 Msa0631170:intron 10.0%
!!! AAAAAATATATTTAGGTTAA+AGG + chr4_3:13806744-13806763 Msa0631170:intron 10.0%
!!! AAAAATATATTTAGGTTAAA+GGG + chr4_3:13806745-13806764 Msa0631170:intron 10.0%
!!! AATAACAATTGAAAATTTTA+AGG - chr4_3:13807872-13807891 None:intergenic 10.0%
!! GATTAATTAATGAAAAAATA+AGG - chr4_3:13809356-13809375 None:intergenic 10.0%
!! AAATAATAAGATATAATAGA+TGG - chr4_3:13810598-13810617 None:intergenic 10.0%
!! TAATACAAAAAAAAAAAAGA+GGG + chr4_3:13811458-13811477 Msa0631170:three_prime_UTR 10.0%
!! TAGACAAAAAAAAAAATCTT+AGG + chr4_3:13806836-13806855 Msa0631170:intron 15.0%
!! AAAAAAAAAAATCTTAGGAA+AGG + chr4_3:13806841-13806860 Msa0631170:intron 15.0%
!! AAAAAAAAAATCTTAGGAAA+GGG + chr4_3:13806842-13806861 Msa0631170:intron 15.0%
!!! TTTTCACCATTATTAAAAAT+GGG - chr4_3:13807804-13807823 None:intergenic 15.0%
!!! ATTTTCACCATTATTAAAAA+TGG - chr4_3:13807805-13807824 None:intergenic 15.0%
!!! TAAATCTAAGAATTTTTTCT+TGG - chr4_3:13808089-13808108 None:intergenic 15.0%
!!! CATTCAAATTTATTAGTTTT+AGG - chr4_3:13808254-13808273 None:intergenic 15.0%
!!! AACTAATATATTCTTTGTTT+TGG + chr4_3:13809690-13809709 Msa0631170:intron 15.0%
!!! ACTAATATATTCTTTGTTTT+GGG + chr4_3:13809691-13809710 Msa0631170:intron 15.0%
!!! AAAATCTAAGAATTTTATCT+TGG - chr4_3:13810132-13810151 None:intergenic 15.0%
!!! TTCTTTTTCTTTTTTTTGAA+AGG + chr4_3:13810540-13810559 Msa0631170:intron 15.0%
!! GTAATACAAAAAAAAAAAAG+AGG + chr4_3:13811457-13811476 Msa0631170:three_prime_UTR 15.0%
!! TGTAATAATGAATATGAATT+CGG + chr4_3:13811559-13811578 Msa0631170:three_prime_UTR 15.0%
!! AAACAATAAGTATTTGACAA+AGG + chr4_3:13806469-13806488 Msa0631170:intron 20.0%
!! AACAATAAGTATTTGACAAA+GGG + chr4_3:13806470-13806489 Msa0631170:intron 20.0%
!! ATAAAAAATGTAGCGATTAT+TGG + chr4_3:13806994-13807013 Msa0631170:intron 20.0%
!! AAATTGATAAAGTAACATCT+AGG - chr4_3:13807276-13807295 None:intergenic 20.0%
!! TGTAAACCTATTTATAGTTA+CGG - chr4_3:13807491-13807510 None:intergenic 20.0%
!! TGATCATATAAAACAATGTT+AGG - chr4_3:13807907-13807926 None:intergenic 20.0%
!! TCTAAGAATCAATTGTTAAA+AGG - chr4_3:13807935-13807954 None:intergenic 20.0%
!!! AATTCATTTAATTTCGTGAT+GGG - chr4_3:13808034-13808053 None:intergenic 20.0%
!!! ATATTTGTTAGTTTTGGATT+GGG - chr4_3:13808369-13808388 None:intergenic 20.0%
!! ACAATATTATATTATGCTGA+TGG - chr4_3:13808928-13808947 None:intergenic 20.0%
!! ATATTGTATATAGTCATTGA+TGG + chr4_3:13808941-13808960 Msa0631170:intron 20.0%
!!! CTAAGAAAATAAGTGTTTTT+TGG - chr4_3:13809921-13809940 None:intergenic 20.0%
!!! CAAAAAACACTTATTTTCTT+AGG + chr4_3:13809919-13809938 Msa0631170:intron 20.0%
!!! AAAATTCTTAGATTTTAGAG+AGG + chr4_3:13810136-13810155 Msa0631170:intron 20.0%
!!! AAAATGGTATTATTTTGTGT+TGG + chr4_3:13810261-13810280 Msa0631170:intron 20.0%
!!! CATTAAGCAATTTTGAAAAA+AGG - chr4_3:13810423-13810442 None:intergenic 20.0%
!!! TTTTCTTTTTTTTGAAAGGA+TGG + chr4_3:13810544-13810563 Msa0631170:intron 20.0%
!!! ATATAATGTTTTTTCAGATG+AGG + chr4_3:13810647-13810666 Msa0631170:intron 20.0%
!! GTAATAATGAATATGAATTC+GGG + chr4_3:13811560-13811579 Msa0631170:three_prime_UTR 20.0%
!! TCTCCATTAAACTAAGTTTT+AGG + chr4_3:13806349-13806368 Msa0631170:intron 25.0%
!! CTCCATTAAACTAAGTTTTA+GGG + chr4_3:13806350-13806369 Msa0631170:intron 25.0%
! AACCCTAAAACTTAGTTTAA+TGG - chr4_3:13806355-13806374 None:intergenic 25.0%
!! TATGTGTGTTATCAAGTTTT+AGG + chr4_3:13806399-13806418 Msa0631170:intron 25.0%
!! ATGTGTGTTATCAAGTTTTA+GGG + chr4_3:13806400-13806419 Msa0631170:intron 25.0%
!! TGACAAAGGGTTTAAAATTA+TGG + chr4_3:13806483-13806502 Msa0631170:intron 25.0%
!! AGGATAAACCTTTAAGTTAT+TGG + chr4_3:13806612-13806631 Msa0631170:intron 25.0%
!! AACCTTTAAGTTATTGGAAA+AGG + chr4_3:13806618-13806637 Msa0631170:intron 25.0%
!! AACCTTTTCCAATAACTTAA+AGG - chr4_3:13806623-13806642 None:intergenic 25.0%
! ATAAAGAAATCGTAATAGTG+TGG + chr4_3:13806939-13806958 Msa0631170:intron 25.0%
!!! ATTATTGGTGGGTAATTTTA+TGG + chr4_3:13807009-13807028 Msa0631170:intron 25.0%
!!! TGGGATTTTTTAAAGCTTAA+TGG + chr4_3:13807132-13807151 Msa0631170:intron 25.0%
! CTGATATGCTATAGAATATT+TGG + chr4_3:13807204-13807223 Msa0631170:intron 25.0%
!!! ATTTTCACACCCTATTTTTT+CGG - chr4_3:13807428-13807447 None:intergenic 25.0%
! GTAAACCTATTTATAGTTAC+GGG - chr4_3:13807490-13807509 None:intergenic 25.0%
! AGATACACAATATCTAAACA+AGG - chr4_3:13807713-13807732 None:intergenic 25.0%
! TTATTAAAAATGGGATTTCC+TGG - chr4_3:13807795-13807814 None:intergenic 25.0%
!!! GGAAATCCCATTTTTAATAA+TGG + chr4_3:13807795-13807814 Msa0631170:intron 25.0%
!! AAATAAACATCTTTTGATGC+TGG + chr4_3:13807821-13807840 Msa0631170:intron 25.0%
!! CAATTCATTTAATTTCGTGA+TGG - chr4_3:13808035-13808054 None:intergenic 25.0%
! ACACTTCAGTAATTATTTAC+TGG + chr4_3:13808145-13808164 Msa0631170:intron 25.0%
!!! CTACTGATTTCATACTATTT+AGG + chr4_3:13808283-13808302 Msa0631170:intron 25.0%
!!! CATATTTGTTAGTTTTGGAT+TGG - chr4_3:13808370-13808389 None:intergenic 25.0%
!!! GCATTCATATTTGTTAGTTT+TGG - chr4_3:13808375-13808394 None:intergenic 25.0%
!! CAAAATACAAGAAAAGTGTA+AGG - chr4_3:13808745-13808764 None:intergenic 25.0%
!! CTTACACTTTTCTTGTATTT+TGG + chr4_3:13808743-13808762 Msa0631170:intron 25.0%
! CTATTTGTTCATTCTATTTC+TGG - chr4_3:13808790-13808809 None:intergenic 25.0%
!! AATGGTGATTTTCTATAAGT+TGG - chr4_3:13808843-13808862 None:intergenic 25.0%
!!! AGATGTTGATTCATTTTAGA+AGG + chr4_3:13809225-13809244 Msa0631170:intron 25.0%
! AATTTCAACTACACCATTAA+AGG + chr4_3:13809418-13809437 Msa0631170:intron 25.0%
! TGAGAATATCTCCTATATTT+AGG + chr4_3:13809506-13809525 Msa0631170:intron 25.0%
! AAAAGACATCTCCTAAATAT+AGG - chr4_3:13809520-13809539 None:intergenic 25.0%
!! ATATTTAGGAGATGTCTTTT+CGG + chr4_3:13809520-13809539 Msa0631170:intron 25.0%
! GGAGTAATATAAAGATGAAA+AGG + chr4_3:13809712-13809731 Msa0631170:intron 25.0%
!! GTAAATACTTCAAAGGATTT+TGG - chr4_3:13809764-13809783 None:intergenic 25.0%
! GATTAACAATCACTAGTATT+AGG - chr4_3:13809947-13809966 None:intergenic 25.0%
! TTGGATACTATCTCTAATTT+AGG - chr4_3:13810073-13810092 None:intergenic 25.0%
!!! AAGCAATTTTGAAAAAAGGA+AGG - chr4_3:13810419-13810438 None:intergenic 25.0%
! TTTCACTTTCCTGAATATAT+AGG + chr4_3:13810615-13810634 Msa0631170:intron 25.0%
! TTTGTTTAGCCTATATATTC+AGG - chr4_3:13810627-13810646 None:intergenic 25.0%
! AAGTTAGAATCTAGTAACAT+AGG + chr4_3:13810825-13810844 Msa0631170:CDS 25.0%
! AGTTAGAATCTAGTAACATA+GGG + chr4_3:13810826-13810845 Msa0631170:CDS 25.0%
! ATAAAAATGAAGACAAAGCA+AGG + chr4_3:13810967-13810986 Msa0631170:CDS 25.0%
!!! GATTTTGGTGAATGTAAAAT+AGG - chr4_3:13811137-13811156 None:intergenic 25.0%
!! TTGAGTCTTATAATTATGCA+TGG - chr4_3:13811623-13811642 None:intergenic 25.0%
! GCATAATTATAAGACTCAAT+TGG + chr4_3:13811624-13811643 Msa0631170:three_prime_UTR 25.0%
! TTTTTCGTTGTTAAACGTTC+CGG + chr4_3:13806200-13806219 Msa0631170:intron 30.0%
! TAATTTAGAGTTTGGTTGTG+AGG + chr4_3:13806241-13806260 Msa0631170:intron 30.0%
TAGTTTAATGGAGACTCAAA+CGG - chr4_3:13806343-13806362 None:intergenic 30.0%
AAAAATGTAGCGATTATTGG+TGG + chr4_3:13806997-13807016 Msa0631170:intron 30.0%
AAAATGTAGCGATTATTGGT+GGG + chr4_3:13806998-13807017 Msa0631170:intron 30.0%
! CGTCTAAAATATTGATGTTG+TGG + chr4_3:13807055-13807074 Msa0631170:intron 30.0%
!!! GACTGCAATTTTTAAAACCT+TGG + chr4_3:13807095-13807114 Msa0631170:intron 30.0%
ATGAATTACTGTTGTCATTC+TGG + chr4_3:13807158-13807177 Msa0631170:intron 30.0%
!! AGAATATTTGGATTTGCTGT+AGG + chr4_3:13807216-13807235 Msa0631170:intron 30.0%
! TTACGCCAATAATGTTGATT+GGG + chr4_3:13807307-13807326 Msa0631170:intron 30.0%
! TGTGAAAATTGTCGTTTAAC+AGG + chr4_3:13807439-13807458 Msa0631170:intron 30.0%
! AAAATTGTCGTTTAACAGGA+GGG + chr4_3:13807443-13807462 Msa0631170:intron 30.0%
AGAAACCCGTAACTATAAAT+AGG + chr4_3:13807482-13807501 Msa0631170:intron 30.0%
!! ACTTTTGACTCTACTAAGAT+GGG + chr4_3:13807574-13807593 Msa0631170:intron 30.0%
CATCAAGTATGAAATTCACA+AGG - chr4_3:13807649-13807668 None:intergenic 30.0%
AACAAGGTATGAAATTCACA+TGG - chr4_3:13807697-13807716 None:intergenic 30.0%
TGCAGCATAATAGGAATATA+TGG - chr4_3:13807993-13808012 None:intergenic 30.0%
ATTTACTGGATCACAAATAG+AGG + chr4_3:13808159-13808178 Msa0631170:intron 30.0%
TATGAAATCAGTAGAAGATG+GGG - chr4_3:13808277-13808296 None:intergenic 30.0%
GTATGAAATCAGTAGAAGAT+GGG - chr4_3:13808278-13808297 None:intergenic 30.0%
AGTATGAAATCAGTAGAAGA+TGG - chr4_3:13808279-13808298 None:intergenic 30.0%
AGTATGAAATCAGTAGAAGA+TGG - chr4_3:13808279-13808298 None:intergenic 30.0%
AAACAAGATGGAACTTCAAT+GGG - chr4_3:13808523-13808542 None:intergenic 30.0%
AAAACAAGATGGAACTTCAA+TGG - chr4_3:13808524-13808543 None:intergenic 30.0%
AGAACTCTTGTAAAACAAGA+TGG - chr4_3:13808535-13808554 None:intergenic 30.0%
! CAACCTTAATGCTTCTTTTT+AGG + chr4_3:13808654-13808673 Msa0631170:intron 30.0%
!! GATCCTAAAAAGAAGCATTA+AGG - chr4_3:13808660-13808679 None:intergenic 30.0%
!! ACACTTTTCTTGTATTTTGG+CGG + chr4_3:13808746-13808765 Msa0631170:intron 30.0%
TTATATTATGCTGATGGCAT+AGG - chr4_3:13808922-13808941 None:intergenic 30.0%
ACCGAATTGCTTAAATTTGA+GGG - chr4_3:13809193-13809212 None:intergenic 30.0%
AACCGAATTGCTTAAATTTG+AGG - chr4_3:13809194-13809213 None:intergenic 30.0%
AAAAGGAATTCAGCAATTTC+TGG - chr4_3:13809378-13809397 None:intergenic 30.0%
AAGAATACTGATGCTGTAAA+AGG - chr4_3:13809395-13809414 None:intergenic 30.0%
AGGAGATATTCTCACTAAAT+AGG - chr4_3:13809500-13809519 None:intergenic 30.0%
TTTATTTGTATAGCTGTGCT+TGG + chr4_3:13809550-13809569 Msa0631170:intron 30.0%
! TTCCTACTTTCTTAGTTCTT+TGG + chr4_3:13809574-13809593 Msa0631170:intron 30.0%
! TCCTACTTTCTTAGTTCTTT+GGG + chr4_3:13809575-13809594 Msa0631170:intron 30.0%
!!! TTATTCGGGATTGTTTTTAG+AGG + chr4_3:13809646-13809665 Msa0631170:intron 30.0%
!!! TATTCGGGATTGTTTTTAGA+GGG + chr4_3:13809647-13809666 Msa0631170:intron 30.0%
GATTTGGGTAAATACTTCAA+AGG - chr4_3:13809771-13809790 None:intergenic 30.0%
!! GTTTCTGGCATTTAGTTTAA+TGG + chr4_3:13809818-13809837 Msa0631170:intron 30.0%
!!! AGTGTTTTTTGGAAGTTGAA+GGG - chr4_3:13809910-13809929 None:intergenic 30.0%
!!! AAGTGTTTTTTGGAAGTTGA+AGG - chr4_3:13809911-13809930 None:intergenic 30.0%
ATACATAATCAATCATGCTG+AGG + chr4_3:13809971-13809990 Msa0631170:intron 30.0%
! CTGTTAACTAAATTGACTCA+GGG - chr4_3:13810001-13810020 None:intergenic 30.0%
! ACTGTTAACTAAATTGACTC+AGG - chr4_3:13810002-13810021 None:intergenic 30.0%
AGAGAATCTAAGCTTGTAAT+AGG + chr4_3:13810230-13810249 Msa0631170:intron 30.0%
GTAATAGGCTTGTACAAAAA+TGG + chr4_3:13810245-13810264 Msa0631170:intron 30.0%
!!! TAATGTTTTTTCAGATGAGG+AGG + chr4_3:13810650-13810669 Msa0631170:intron 30.0%
GTTAGAATCTAGTAACATAG+GGG + chr4_3:13810827-13810846 Msa0631170:CDS 30.0%
TTAGAATCTAGTAACATAGG+GGG + chr4_3:13810828-13810847 Msa0631170:CDS 30.0%
!! AATTCTTTGAAATCCTCAGA+AGG + chr4_3:13810912-13810931 Msa0631170:CDS 30.0%
TTCAATTATACCATGAAGTC+AGG + chr4_3:13810997-13811016 Msa0631170:CDS 30.0%
TCAATTATACCATGAAGTCA+GGG + chr4_3:13810998-13811017 Msa0631170:CDS 30.0%
TCTGAATATTCAATGAAGTC+TGG - chr4_3:13811278-13811297 None:intergenic 30.0%
TCAAAACTTGTGAAAGATTG+AGG - chr4_3:13811302-13811321 None:intergenic 30.0%
!!! ATCTTTCACAAGTTTTGAGT+TGG + chr4_3:13811304-13811323 Msa0631170:CDS 30.0%
AATGGATCATGATTACATAC+TGG + chr4_3:13811429-13811448 Msa0631170:exon 30.0%
AAAAAGAGGGCAAATCTTAA+TGG + chr4_3:13811471-13811490 Msa0631170:three_prime_UTR 30.0%
AAAAGAGGGCAAATCTTAAT+GGG + chr4_3:13811472-13811491 Msa0631170:three_prime_UTR 30.0%
! TACGAATTTGTTTGCTACTA+AGG - chr4_3:13811523-13811542 None:intergenic 30.0%
TTAGTAGCAAACAAATTCGT+AGG + chr4_3:13811522-13811541 Msa0631170:three_prime_UTR 30.0%
TAGTAGCAAACAAATTCGTA+GGG + chr4_3:13811523-13811542 Msa0631170:three_prime_UTR 30.0%
AGCTTGATCCTTCTGTTAAA+CGG + chr4_3:13806129-13806148 Msa0631170:intron 35.0%
ACAAGTTACATACCAGTGAA+GGG - chr4_3:13806158-13806177 None:intergenic 35.0%
AACAAGTTACATACCAGTGA+AGG - chr4_3:13806159-13806178 None:intergenic 35.0%
! GGCTCTTGTAATTTAGAGTT+TGG + chr4_3:13806233-13806252 Msa0631170:intron 35.0%
! GTTTGAGAATTGTTCGAGTT+CGG + chr4_3:13806277-13806296 Msa0631170:intron 35.0%
! TTTGAGAATTGTTCGAGTTC+GGG + chr4_3:13806278-13806297 Msa0631170:intron 35.0%
! AGGGTTTAAAATTATGGTCG+TGG + chr4_3:13806489-13806508 Msa0631170:intron 35.0%
GTCTAGATTGCAAAACAACA+AGG + chr4_3:13806592-13806611 Msa0631170:intron 35.0%
!!! TTGGAAAAGGTTTTAAAGCG+TGG + chr4_3:13806631-13806650 Msa0631170:intron 35.0%
! TGTTTGTGATCTTTTACGCA+TGG + chr4_3:13806875-13806894 Msa0631170:intron 35.0%
!! ATTGGTGGGTAATTTTATGG+TGG + chr4_3:13807012-13807031 Msa0631170:intron 35.0%
TGATGTTGTGGCTACAAATT+TGG + chr4_3:13807067-13807086 Msa0631170:intron 35.0%
CTTGGTATAATGTGACATGT+GGG + chr4_3:13807113-13807132 Msa0631170:intron 35.0%
GTTACGCCAATAATGTTGAT+TGG + chr4_3:13807306-13807325 Msa0631170:intron 35.0%
ACCATCCCAATCAACATTAT+TGG - chr4_3:13807315-13807334 None:intergenic 35.0%
! AATAATGTTGATTGGGATGG+TGG + chr4_3:13807314-13807333 Msa0631170:intron 35.0%
TTGAACCACTCCGAAAAAAT+AGG + chr4_3:13807415-13807434 Msa0631170:intron 35.0%
TGAACCACTCCGAAAAAATA+GGG + chr4_3:13807416-13807435 Msa0631170:intron 35.0%
! GAAAATTGTCGTTTAACAGG+AGG + chr4_3:13807442-13807461 Msa0631170:intron 35.0%
!! CTCTGAAACACAAACAAACA+GGG - chr4_3:13807515-13807534 None:intergenic 35.0%
ATATACTCTTCAACCATGAG+CGG - chr4_3:13807549-13807568 None:intergenic 35.0%
!! CACTTTTGACTCTACTAAGA+TGG + chr4_3:13807573-13807592 Msa0631170:intron 35.0%
AAGCTCAAATGATGAAGACT+TGG - chr4_3:13807674-13807693 None:intergenic 35.0%
! TGGTCAAAATTTGTGCTGTT+TGG + chr4_3:13807761-13807780 Msa0631170:intron 35.0%
! TAACTAGCTTGCAGCATAAT+AGG - chr4_3:13808002-13808021 None:intergenic 35.0%
! TGATGGATCAAGAGAGTAAT+CGG - chr4_3:13808493-13808512 None:intergenic 35.0%
CTTCAATGGGATGATATTGA+TGG - chr4_3:13808510-13808529 None:intergenic 35.0%
! TTTTACAAGAGTTCTCACAG+TGG + chr4_3:13808540-13808559 Msa0631170:intron 35.0%
TGAACAAGTGGATAGAAGAA+AGG - chr4_3:13808618-13808637 None:intergenic 35.0%
TTTGGCAGAATATGAACAAG+TGG - chr4_3:13808630-13808649 None:intergenic 35.0%
!!! AAGCATTAAGGTTGCTGTTT+TGG - chr4_3:13808648-13808667 None:intergenic 35.0%
! GTTTTGTGTAGTCAGCTAAT+CGG - chr4_3:13808701-13808720 None:intergenic 35.0%
! ACAAGAAAAGTGTAAGGCAA+GGG - chr4_3:13808739-13808758 None:intergenic 35.0%
! TACAAGAAAAGTGTAAGGCA+AGG - chr4_3:13808740-13808759 None:intergenic 35.0%
GTTTGACAGGTGAAGAAAAA+TGG - chr4_3:13808861-13808880 None:intergenic 35.0%
GTCAACTCGTAGCAAATAAT+GGG - chr4_3:13808969-13808988 None:intergenic 35.0%
AGTCAACTCGTAGCAAATAA+TGG - chr4_3:13808970-13808989 None:intergenic 35.0%
! TTGACGTCAACTATGGTTTT+GGG - chr4_3:13809024-13809043 None:intergenic 35.0%
AGGTCTTCTAACTCAAAAAC+TGG + chr4_3:13809047-13809066 Msa0631170:intron 35.0%
ATCCAAGAATTTCTCCACTT+GGG + chr4_3:13809144-13809163 Msa0631170:intron 35.0%
GCCCTCAAATTTAAGCAATT+CGG + chr4_3:13809189-13809208 Msa0631170:intron 35.0%
ACAGACAAATAAGGAGAAAG+AGG - chr4_3:13809276-13809295 None:intergenic 35.0%
! TCCTTATTTGTCTGTGACTT+TGG + chr4_3:13809281-13809300 Msa0631170:intron 35.0%
ACCAAAGTCACAGACAAATA+AGG - chr4_3:13809285-13809304 None:intergenic 35.0%
! ATAAGGCATCAACTTTGAGA+CGG - chr4_3:13809339-13809358 None:intergenic 35.0%
ATAGGAGATACTATCCAACT+GGG - chr4_3:13809482-13809501 None:intergenic 35.0%
AATAGGAGATACTATCCAAC+TGG - chr4_3:13809483-13809502 None:intergenic 35.0%
TCCCAAAGAACTAAGAAAGT+AGG - chr4_3:13809579-13809598 None:intergenic 35.0%
! TTCTTAGTTCTTTGGGAGTT+AGG + chr4_3:13809582-13809601 Msa0631170:intron 35.0%
!!! ATTCGGGATTGTTTTTAGAG+GGG + chr4_3:13809648-13809667 Msa0631170:intron 35.0%
GGGAACTCAAAAGATGATTT+GGG - chr4_3:13809786-13809805 None:intergenic 35.0%
AGATAGTATCCAACAAGACA+TGG + chr4_3:13810080-13810099 Msa0631170:intron 35.0%
AATTGTTCACTGAATCACAG+AGG + chr4_3:13810201-13810220 Msa0631170:intron 35.0%
TGTGAATCTCTACTGTCTAT+TGG + chr4_3:13810380-13810399 Msa0631170:intron 35.0%
AATGATGCGACATAGACATA+GGG - chr4_3:13810453-13810472 None:intergenic 35.0%
AAATGATGCGACATAGACAT+AGG - chr4_3:13810454-13810473 None:intergenic 35.0%
ATGCAATCCATGGAAACAAA+TGG + chr4_3:13810694-13810713 Msa0631170:CDS 35.0%
TGCAATCCATGGAAACAAAT+GGG + chr4_3:13810695-13810714 Msa0631170:CDS 35.0%
ATAATGCCATTAAGAACCAC+TGG + chr4_3:13810751-13810770 Msa0631170:CDS 35.0%
AGAATTCCAGTGGTTCTTAA+TGG - chr4_3:13810760-13810779 None:intergenic 35.0%
TCTGAAGAAACTCTATCATG+TGG + chr4_3:13810882-13810901 Msa0631170:CDS 35.0%
!! AGGAAGAGATGTTAGTTCTA+TGG + chr4_3:13810932-13810951 Msa0631170:CDS 35.0%
!! TGTTAGTTCTATGGAGATTG+TGG + chr4_3:13810941-13810960 Msa0631170:CDS 35.0%
AATGCGTATAACGCTTTCAA+TGG + chr4_3:13811065-13811084 Msa0631170:CDS 35.0%
TGTAAAATAGGTCCTTGCAT+TGG - chr4_3:13811125-13811144 None:intergenic 35.0%
ACATTCACCAAAATCAGATG+CGG + chr4_3:13811142-13811161 Msa0631170:CDS 35.0%
! CAAATTTCCGCATCTGATTT+TGG - chr4_3:13811152-13811171 None:intergenic 35.0%
TTAACAGAACTATTGTCGAC+CGG + chr4_3:13811180-13811199 Msa0631170:CDS 35.0%
AACTCCAAAAGCTCTTTGTT+GGG + chr4_3:13811251-13811270 Msa0631170:CDS 35.0%
! TCATGATTACATACTGGCTA+TGG + chr4_3:13811435-13811454 Msa0631170:three_prime_UTR 35.0%
ACTAACAAGACGACTGAGAA+TGG - chr4_3:13806024-13806043 None:intergenic 40.0%
! AGTCGTCTTGTTAGTCAGTT+CGG + chr4_3:13806029-13806048 Msa0631170:CDS 40.0%
TTGATTGCTCGTGGAATTTC+TGG + chr4_3:13806068-13806087 Msa0631170:CDS 40.0%
! TCGTGGAATTTCTGGAAGAT+CGG + chr4_3:13806076-13806095 Msa0631170:CDS 40.0%
GATCAAGCTGATTACACCAT+CGG - chr4_3:13806118-13806137 None:intergenic 40.0%
AAGGGTTTCCGTTTAACAGA+AGG - chr4_3:13806140-13806159 None:intergenic 40.0%
GTTGTTAAACGTTCCGGTTT+AGG + chr4_3:13806206-13806225 Msa0631170:intron 40.0%
TTAAACGTTCCGGTTTAGGA+AGG + chr4_3:13806210-13806229 Msa0631170:intron 40.0%
TAAACGTTCCGGTTTAGGAA+GGG + chr4_3:13806211-13806230 Msa0631170:intron 40.0%
GTTGTGAGGTAAGTAAAGTC+TGG + chr4_3:13806255-13806274 Msa0631170:intron 40.0%
CGTTTACTTGTGGTCAAATG+TGG + chr4_3:13806513-13806532 Msa0631170:intron 40.0%
!!! AAGGTTTTAAAGCGTGGTTG+TGG + chr4_3:13806637-13806656 Msa0631170:intron 40.0%
AAAGAATCGTGGTCAATGTG+TGG + chr4_3:13806673-13806692 Msa0631170:intron 40.0%
! TGTTTCTACAGCTGCAATTG+AGG - chr4_3:13806723-13806742 None:intergenic 40.0%
ATCCTTTACGTGGTCAAATG+TGG + chr4_3:13806786-13806805 Msa0631170:intron 40.0%
TGTCTATACGACTGCAATTG+AGG - chr4_3:13806822-13806841 None:intergenic 40.0%
! CTTTTACGCATGGTCAAATG+TGG + chr4_3:13806885-13806904 Msa0631170:intron 40.0%
TAATAGTGTGGCCTAGATAG+CGG + chr4_3:13806951-13806970 Msa0631170:intron 40.0%
! TGTGGCTACAAATTTGGTTC+TGG + chr4_3:13807073-13807092 Msa0631170:intron 40.0%
CCACATGTCACATTATACCA+AGG - chr4_3:13807115-13807134 None:intergenic 40.0%
CCTTGGTATAATGTGACATG+TGG + chr4_3:13807112-13807131 Msa0631170:intron 40.0%
! GCCAATAATGTTGATTGGGA+TGG + chr4_3:13807311-13807330 Msa0631170:intron 40.0%
CACTACTATAGCAAGAGTCA+CGG - chr4_3:13807359-13807378 None:intergenic 40.0%
TGTGATTGATGTTTGCCAAG+TGG + chr4_3:13807377-13807396 Msa0631170:intron 40.0%
!! CCTCTGAAACACAAACAAAC+AGG - chr4_3:13807516-13807535 None:intergenic 40.0%
CCTGTTTGTTTGTGTTTCAG+AGG + chr4_3:13807513-13807532 Msa0631170:intron 40.0%
! AGCCAAGTAGGTTTTGCTTA+TGG + chr4_3:13807741-13807760 Msa0631170:intron 40.0%
GACCATAAGCAAAACCTACT+TGG - chr4_3:13807746-13807765 None:intergenic 40.0%
! TGCTGTTTGGTTTCAATACC+AGG + chr4_3:13807774-13807793 Msa0631170:intron 40.0%
AAAAAGAGAGCTGAGTACCT+TGG + chr4_3:13808108-13808127 Msa0631170:intron 40.0%
TGTTCATTCTCTTTCCTCCA+AGG - chr4_3:13808128-13808147 None:intergenic 40.0%
TGAAGGAAAACACATGGAAG+AGG - chr4_3:13808202-13808221 None:intergenic 40.0%
AAAGGCTGAAGGAAAACACA+TGG - chr4_3:13808208-13808227 None:intergenic 40.0%
CAGTAGTGACTCACTTGTAA+AGG - chr4_3:13808226-13808245 None:intergenic 40.0%
GGTTAGCACTGTTAAGGATA+GGG - chr4_3:13808314-13808333 None:intergenic 40.0%
CTATCCTTAACAGTGCTAAC+CGG + chr4_3:13808313-13808332 Msa0631170:intron 40.0%
AGATAGCACTGTTAAGGCTA+GGG - chr4_3:13808434-13808453 None:intergenic 40.0%
TTAGCCAGATAGCACTGTTA+AGG - chr4_3:13808440-13808459 None:intergenic 40.0%
GAGTAATCATAGAACCAGCT+GGG - chr4_3:13808466-13808485 None:intergenic 40.0%
TGTTAAGATGAATCCCAAGC+AGG - chr4_3:13808590-13808609 None:intergenic 40.0%
!!! TCTTTTTAGGATCCTGTGCA+TGG + chr4_3:13808667-13808686 Msa0631170:intron 40.0%
!!! CTTTTTAGGATCCTGTGCAT+GGG + chr4_3:13808668-13808687 Msa0631170:intron 40.0%
! CAAGAAAAGTGTAAGGCAAG+GGG - chr4_3:13808738-13808757 None:intergenic 40.0%
! CTTGACGTCAACTATGGTTT+TGG - chr4_3:13809025-13809044 None:intergenic 40.0%
ACCATAGTTGACGTCAAGTT+AGG + chr4_3:13809027-13809046 Msa0631170:intron 40.0%
ACCTAACTTGACGTCAACTA+TGG - chr4_3:13809031-13809050 None:intergenic 40.0%
AGAAATTCTTGGATCTGCAC+TGG - chr4_3:13809138-13809157 None:intergenic 40.0%
GATCCAAGAATTTCTCCACT+TGG + chr4_3:13809143-13809162 Msa0631170:intron 40.0%
TTTGAGGGCAGCAATTTGAT+GGG - chr4_3:13809178-13809197 None:intergenic 40.0%
ATTTGAGGGCAGCAATTTGA+TGG - chr4_3:13809179-13809198 None:intergenic 40.0%
GTCACAAAAGGATGGTGATT+TGG - chr4_3:13809252-13809271 None:intergenic 40.0%
AAAGAGGAGTCACAAAAGGA+TGG - chr4_3:13809260-13809279 None:intergenic 40.0%
! GTCTGTGACTTTGGTGTATT+TGG + chr4_3:13809290-13809309 Msa0631170:intron 40.0%
! GACTTTGGTGTATTTGGAGT+AGG + chr4_3:13809296-13809315 Msa0631170:intron 40.0%
ACTATCCAACTGGGTACAAT+CGG - chr4_3:13809473-13809492 None:intergenic 40.0%
! TTAGTTCTTTGGGAGTTAGG+AGG + chr4_3:13809585-13809604 Msa0631170:intron 40.0%
AACAATCCCGAATAAAGCGA+GGG - chr4_3:13809641-13809660 None:intergenic 40.0%
AAACAATCCCGAATAAAGCG+AGG - chr4_3:13809642-13809661 None:intergenic 40.0%
GGGGAACTCAAAAGATGATT+TGG - chr4_3:13809787-13809806 None:intergenic 40.0%
!!! TCTTTTGAGTTCCCCCAAAT+TGG + chr4_3:13809792-13809811 Msa0631170:intron 40.0%
AAAGAGAGGGGAAAGAGAAA+GGG - chr4_3:13809886-13809905 None:intergenic 40.0%
AAAAGAGAGGGGAAAGAGAA+AGG - chr4_3:13809887-13809906 None:intergenic 40.0%
AAGTTGAAGGGAAAAGAGAG+GGG - chr4_3:13809898-13809917 None:intergenic 40.0%
GAAGTTGAAGGGAAAAGAGA+GGG - chr4_3:13809899-13809918 None:intergenic 40.0%
TCCAACAAGACATGGTACAT+TGG + chr4_3:13810088-13810107 Msa0631170:intron 40.0%
TCCAATGTACCATGTCTTGT+TGG - chr4_3:13810092-13810111 None:intergenic 40.0%
!! AGATTTTAGAGAGGAAGCTG+AGG + chr4_3:13810145-13810164 Msa0631170:intron 40.0%
!! GATTTTAGAGAGGAAGCTGA+GGG + chr4_3:13810146-13810165 Msa0631170:intron 40.0%
ATGAAGAACAAATGGGACAC+GGG - chr4_3:13810481-13810500 None:intergenic 40.0%
CATGAAGAACAAATGGGACA+CGG - chr4_3:13810482-13810501 None:intergenic 40.0%
GTGTCCCATTTGTTCTTCAT+GGG + chr4_3:13810481-13810500 Msa0631170:intron 40.0%
TGTCCCATTTGTTCTTCATG+GGG + chr4_3:13810482-13810501 Msa0631170:intron 40.0%
ACACCCCATGAAGAACAAAT+GGG - chr4_3:13810488-13810507 None:intergenic 40.0%
!!! TTTTTTCAGATGAGGAGGAC+CGG + chr4_3:13810655-13810674 Msa0631170:intron 40.0%
ATGGCATTATCTGTTCTTCC+TGG - chr4_3:13810741-13810760 None:intergenic 40.0%
ACTAACATCTCTTCCTTCTG+AGG - chr4_3:13810928-13810947 None:intergenic 40.0%
!! ACGTGCTACTGGCTTAAAAA+GGG - chr4_3:13811033-13811052 None:intergenic 40.0%
CAACTCCAAAAGCTCTTTGT+TGG + chr4_3:13811250-13811269 Msa0631170:CDS 40.0%
CAGACATTAGTAACCTTGCT+TGG + chr4_3:13811339-13811358 Msa0631170:CDS 40.0%
AACCTTGCTTGGCTTAAAAG+TGG + chr4_3:13811350-13811369 Msa0631170:CDS 40.0%
!! ATCCACTTTTAAGCCAAGCA+AGG - chr4_3:13811355-13811374 None:intergenic 40.0%
TGCTTGGCTTAAAAGTGGAT+TGG + chr4_3:13811355-13811374 Msa0631170:CDS 40.0%
AACAGCAGCGTCAAAATGAT+GGG + chr4_3:13811380-13811399 Msa0631170:CDS 40.0%
!! AAAATGATGGGTGATACTGC+TGG + chr4_3:13811392-13811411 Msa0631170:CDS 40.0%
CTGGCAGGGTTAATATCTAA+TGG + chr4_3:13811411-13811430 Msa0631170:CDS 40.0%
TGACATTATGCACATCCATC+CGG - chr4_3:13811499-13811518 None:intergenic 40.0%
!! AGAGTTGGTGGTTGTTGTTC+TGG - chr4_3:13805891-13805910 None:intergenic 45.0%
ACAACAACCACCAACTCTCA+CGG + chr4_3:13805893-13805912 Msa0631170:CDS 45.0%
AGTAGCGGTAGCAAAGTGAA+AGG + chr4_3:13805975-13805994 Msa0631170:CDS 45.0%
GTAGCAAAGTGAAAGGACCT+TGG + chr4_3:13805982-13806001 Msa0631170:CDS 45.0%
AACTGGAGTTTGATTGCTCG+TGG + chr4_3:13806059-13806078 Msa0631170:CDS 45.0%
! CGTGGAATTTCTGGAAGATC+GGG + chr4_3:13806077-13806096 Msa0631170:CDS 45.0%
! GTGGAATTTCTGGAAGATCG+GGG + chr4_3:13806078-13806097 Msa0631170:CDS 45.0%
GTTAAACGGAAACCCTTCAC+TGG + chr4_3:13806143-13806162 Msa0631170:intron 45.0%
AAACGTTCCGGTTTAGGAAG+GGG + chr4_3:13806212-13806231 Msa0631170:intron 45.0%
TACTTGTGGTCAAATGTGGC+TGG + chr4_3:13806517-13806536 Msa0631170:intron 45.0%
! TTTTACGCGGGAAAGAATCG+TGG + chr4_3:13806662-13806681 Msa0631170:intron 45.0%
AATGTGTGGTCAAATGTGCC+TGG + chr4_3:13806687-13806706 Msa0631170:intron 45.0%
AATTGAGGCTACACTACACC+AGG - chr4_3:13806708-13806727 None:intergenic 45.0%
TGTGTTCGTGATCCTTTACG+TGG + chr4_3:13806776-13806795 Msa0631170:intron 45.0%
AGCCACATTTGACCACGTAA+AGG - chr4_3:13806791-13806810 None:intergenic 45.0%
TTGTGTGACCTCAATTGGAG+TGG + chr4_3:13806909-13806928 Msa0631170:intron 45.0%
TGTCTCAACCACTCCAATTG+AGG - chr4_3:13806920-13806939 None:intergenic 45.0%
!!! CACACCCTATTTTTTCGGAG+TGG - chr4_3:13807423-13807442 None:intergenic 45.0%
TGAACTCGATGCTCTGACAT+AGG + chr4_3:13807605-13807624 Msa0631170:intron 45.0%
ACAAGGAAGCTCAAATGACG+AGG - chr4_3:13807632-13807651 None:intergenic 45.0%
ATCTTGTTCTGCAGCCAAGT+AGG + chr4_3:13807729-13807748 Msa0631170:intron 45.0%
ATTCAAGAGTCTTGCTCACG+TGG + chr4_3:13808061-13808080 Msa0631170:intron 45.0%
GGATCACAAATAGAGGCCAA+TGG + chr4_3:13808166-13808185 Msa0631170:intron 45.0%
!! AAGAGGAGTGTTGTCTCCAT+TGG - chr4_3:13808185-13808204 None:intergenic 45.0%
GACTCACTTGTAAAGGCTGA+AGG - chr4_3:13808219-13808238 None:intergenic 45.0%
CGGTTAGCACTGTTAAGGAT+AGG - chr4_3:13808315-13808334 None:intergenic 45.0%
TTAGCCGGTTAGCACTGTTA+AGG - chr4_3:13808320-13808339 None:intergenic 45.0%
CAGTTAGCATTGTTAACCCG+AGG - chr4_3:13808346-13808365 None:intergenic 45.0%
CAGATAGCACTGTTAAGGCT+AGG - chr4_3:13808435-13808454 None:intergenic 45.0%
!! CTAGCCTTAACAGTGCTATC+TGG + chr4_3:13808433-13808452 Msa0631170:intron 45.0%
GGAGTAATCATAGAACCAGC+TGG - chr4_3:13808467-13808486 None:intergenic 45.0%
GATCAAGAGAGTAATCGGCT+TGG - chr4_3:13808488-13808507 None:intergenic 45.0%
! CCAAGCAGGAGAAGTACAAT+GGG - chr4_3:13808576-13808595 None:intergenic 45.0%
CCATTGTACTTCTCCTGCTT+GGG + chr4_3:13808574-13808593 Msa0631170:intron 45.0%
CTGTCAAACCTCGAATATCC+CGG + chr4_3:13808872-13808891 Msa0631170:intron 45.0%
CATAGGCTTGAAAGATCCAG+AGG - chr4_3:13808905-13808924 None:intergenic 45.0%
!!! TGGTTTTGGGCAAGGAGTAT+GGG - chr4_3:13809011-13809030 None:intergenic 45.0%
!!! ATGGTTTTGGGCAAGGAGTA+TGG - chr4_3:13809012-13809031 None:intergenic 45.0%
!!! GTCAACTATGGTTTTGGGCA+AGG - chr4_3:13809019-13809038 None:intergenic 45.0%
TGCCCAAGTGGAGAAATTCT+TGG - chr4_3:13809149-13809168 None:intergenic 45.0%
GGAGAAAGAGGAGTCACAAA+AGG - chr4_3:13809264-13809283 None:intergenic 45.0%
!! CAACTTTGAGACGGAAGAAG+AGG - chr4_3:13809330-13809349 None:intergenic 45.0%
!! CCATGGAGAGTGTCCTTTAA+TGG - chr4_3:13809434-13809453 None:intergenic 45.0%
CCATTAAAGGACACTCTCCA+TGG + chr4_3:13809431-13809450 Msa0631170:intron 45.0%
TGTTTCCGATTGTACCCAGT+TGG + chr4_3:13809465-13809484 Msa0631170:intron 45.0%
GGAGTTAGGAGGTGAAGAAA+GGG + chr4_3:13809596-13809615 Msa0631170:intron 45.0%
GAGTTAGGAGGTGAAGAAAG+GGG + chr4_3:13809597-13809616 Msa0631170:intron 45.0%
! GGGTAATCCCTCGCTTTATT+CGG + chr4_3:13809631-13809650 Msa0631170:intron 45.0%
! GGTAATCCCTCGCTTTATTC+GGG + chr4_3:13809632-13809651 Msa0631170:intron 45.0%
!!! GGGATTGTTTTTAGAGGGGA+GGG + chr4_3:13809652-13809671 Msa0631170:intron 45.0%
!!! TTGTTTTTAGAGGGGAGGGA+AGG + chr4_3:13809656-13809675 Msa0631170:intron 45.0%
! TTTGAGTTCCCCCAAATTGG+AGG + chr4_3:13809795-13809814 Msa0631170:intron 45.0%
TTGAGTTCCCCCAAATTGGA+GGG + chr4_3:13809796-13809815 Msa0631170:intron 45.0%
TGCCAGAAACCCTCCAATTT+GGG - chr4_3:13809808-13809827 None:intergenic 45.0%
ATGCCAGAAACCCTCCAATT+TGG - chr4_3:13809809-13809828 None:intergenic 45.0%
AAATGAAACCCCTTGCCAAG+TGG + chr4_3:13809844-13809863 Msa0631170:intron 45.0%
AATGAAACCCCTTGCCAAGT+GGG + chr4_3:13809845-13809864 Msa0631170:intron 45.0%
GGAAGTTGAAGGGAAAAGAG+AGG - chr4_3:13809900-13809919 None:intergenic 45.0%
! TGCCTGTGCTTGCAAGTTTT+GGG + chr4_3:13810040-13810059 Msa0631170:intron 45.0%
GATTCAGTGAACAATTGCGC+AGG - chr4_3:13810197-13810216 None:intergenic 45.0%
CGTGTCCCATTTGTTCTTCA+TGG + chr4_3:13810480-13810499 Msa0631170:intron 45.0%
CACACCCCATGAAGAACAAA+TGG - chr4_3:13810489-13810508 None:intergenic 45.0%
TTCATGGGGTGTGATCTTCA+AGG + chr4_3:13810496-13810515 Msa0631170:intron 45.0%
CATGAGCAGCAACTATGATC+CGG - chr4_3:13810677-13810696 None:intergenic 45.0%
ACCACTGGAATTCTACTCTG+AGG + chr4_3:13810766-13810785 Msa0631170:CDS 45.0%
CATAGGGGGAAATATCAGCT+TGG + chr4_3:13810842-13810861 Msa0631170:CDS 45.0%
!! GCTACTGGCTTAAAAAGGGT+CGG - chr4_3:13811029-13811048 None:intergenic 45.0%
!! CACGTGCTACTGGCTTAAAA+AGG - chr4_3:13811034-13811053 None:intergenic 45.0%
! AAAGCACTTACACGTGCTAC+TGG - chr4_3:13811044-13811063 None:intergenic 45.0%
TGGAGCTGATGTTGAAGGTT+GGG - chr4_3:13811093-13811112 None:intergenic 45.0%
TTGGAGCTGATGTTGAAGGT+TGG - chr4_3:13811094-13811113 None:intergenic 45.0%
ATAGGTCCTTGCATTGGAAC+AGG - chr4_3:13811119-13811138 None:intergenic 45.0%
! CATCCATGACCACACTGATT+AGG - chr4_3:13811212-13811231 None:intergenic 45.0%
! TGGTCCCAACAAAGAGCTTT+TGG - chr4_3:13811258-13811277 None:intergenic 45.0%
GAACAGCAGCGTCAAAATGA+TGG + chr4_3:13811379-13811398 Msa0631170:CDS 45.0%
AGGGCAAATCTTAATGGGAC+CGG + chr4_3:13811477-13811496 Msa0631170:three_prime_UTR 45.0%
CAAATCTTAATGGGACCGGA+TGG + chr4_3:13811481-13811500 Msa0631170:three_prime_UTR 45.0%
!! AAAAAAAAATATTAATAATG+TGG + chr4_3:13806570-13806589 Msa0631170:intron 5.0%
!!! CATTTTTTATATATAAAAAA+AGG - chr4_3:13806984-13807003 None:intergenic 5.0%
GACGAAGGTTTAGCCGCATT+AGG + chr4_3:13805936-13805955 Msa0631170:CDS 50.0%
CTGAGAATGGCGTCTTCTTC+AGG - chr4_3:13806011-13806030 None:intergenic 50.0%
!! GTCAGTTCGGTGCTAGAAAC+TGG + chr4_3:13806042-13806061 Msa0631170:CDS 50.0%
ACAAGAGCCCCTTCCTAAAC+CGG - chr4_3:13806222-13806241 None:intergenic 50.0%
TGGTCGTGGTCGTTTACTTG+TGG + chr4_3:13806503-13806522 Msa0631170:intron 50.0%
TTGTGGTCAAATGTGGCTGG+TGG + chr4_3:13806520-13806539 Msa0631170:intron 50.0%
TGTGGTCAAATGTGGCTGGT+GGG + chr4_3:13806521-13806540 Msa0631170:intron 50.0%
TGTCTCTACGACTCCAAGTG+AGG - chr4_3:13806548-13806567 None:intergenic 50.0%
! CGTGGTTGTGGTCTTTTACG+CGG + chr4_3:13806649-13806668 Msa0631170:intron 50.0%
! GTGGTTGTGGTCTTTTACGC+GGG + chr4_3:13806650-13806669 Msa0631170:intron 50.0%
! GTGGTCAAATGTGGCTTGTG+TGG + chr4_3:13806795-13806814 Msa0631170:intron 50.0%
! GTGGCTTGTGTGACCTCAAT+TGG + chr4_3:13806904-13806923 Msa0631170:intron 50.0%
AAGGTCTGCAACCGCTATCT+AGG - chr4_3:13806965-13806984 None:intergenic 50.0%
! GTTTGAGACTCGAGTCCACT+TGG - chr4_3:13807395-13807414 None:intergenic 50.0%
TGTGTTTCAGAGGCCCCAAA+TGG + chr4_3:13807523-13807542 Msa0631170:intron 50.0%
TCAACCATGAGCGGCCATTT+GGG - chr4_3:13807540-13807559 None:intergenic 50.0%
TTCAACCATGAGCGGCCATT+TGG - chr4_3:13807541-13807560 None:intergenic 50.0%
AAGAGAGCTGAGTACCTTGG+AGG + chr4_3:13808111-13808130 Msa0631170:intron 50.0%
CCCATTGTACTTCTCCTGCT+TGG + chr4_3:13808573-13808592 Msa0631170:intron 50.0%
! CCCAAGCAGGAGAAGTACAA+TGG - chr4_3:13808577-13808596 None:intergenic 50.0%
TTAGGATCCTGTGCATGGGA+TGG + chr4_3:13808672-13808691 Msa0631170:intron 50.0%
TAGGATCCTGTGCATGGGAT+GGG + chr4_3:13808673-13808692 Msa0631170:intron 50.0%
CGGGATATTCGAGGTTTGAC+AGG - chr4_3:13808874-13808893 None:intergenic 50.0%
AAGATCCAGAGGAGCAACTC+CGG - chr4_3:13808894-13808913 None:intergenic 50.0%
CTGAGAGTTAAGCAGTGCAC+TGG - chr4_3:13809075-13809094 None:intergenic 50.0%
GAAACAGAGGACAGAAGCCA+TGG - chr4_3:13809451-13809470 None:intergenic 50.0%
CTGGGTACAATCGGAAACAG+AGG - chr4_3:13809464-13809483 None:intergenic 50.0%
GGGAGTTAGGAGGTGAAGAA+AGG + chr4_3:13809595-13809614 Msa0631170:intron 50.0%
TTAGGAGGTGAAGAAAGGGG+AGG + chr4_3:13809600-13809619 Msa0631170:intron 50.0%
TAGGAGGTGAAGAAAGGGGA+GGG + chr4_3:13809601-13809620 Msa0631170:intron 50.0%
GTGAAGAAAGGGGAGGGAAA+GGG + chr4_3:13809607-13809626 Msa0631170:intron 50.0%
!!! CGGGATTGTTTTTAGAGGGG+AGG + chr4_3:13809651-13809670 Msa0631170:intron 50.0%
CCAGAAACCCTCCAATTTGG+GGG - chr4_3:13809806-13809825 None:intergenic 50.0%
GCCAGAAACCCTCCAATTTG+GGG - chr4_3:13809807-13809826 None:intergenic 50.0%
ATGAAACCCCTTGCCAAGTG+GGG + chr4_3:13809846-13809865 Msa0631170:intron 50.0%
ATAGTTCCCCACTTGGCAAG+GGG - chr4_3:13809855-13809874 None:intergenic 50.0%
GATAGTTCCCCACTTGGCAA+GGG - chr4_3:13809856-13809875 None:intergenic 50.0%
AGGGGAAAGAGAAAGGGAAG+GGG - chr4_3:13809880-13809899 None:intergenic 50.0%
GAGGGGAAAGAGAAAGGGAA+GGG - chr4_3:13809881-13809900 None:intergenic 50.0%
AGAGGGGAAAGAGAAAGGGA+AGG - chr4_3:13809882-13809901 None:intergenic 50.0%
ACAGTTCACCCCTCTCAAGA+TGG + chr4_3:13810017-13810036 Msa0631170:intron 50.0%
! GTGCCTGTGCTTGCAAGTTT+TGG + chr4_3:13810039-13810058 Msa0631170:intron 50.0%
TGCCCAAAACTTGCAAGCAC+AGG - chr4_3:13810045-13810064 None:intergenic 50.0%
GTTGCTGCTCATGCAATCCA+TGG + chr4_3:13810684-13810703 Msa0631170:CDS 50.0%
TGGCTGCCCATTTGTTTCCA+TGG - chr4_3:13810704-13810723 None:intergenic 50.0%
ACAAATGGGCAGCCATTGCT+AGG + chr4_3:13810709-13810728 Msa0631170:CDS 50.0%
GCCTCAGAGTAGAATTCCAG+TGG - chr4_3:13810770-13810789 None:intergenic 50.0%
!! AATTCTACTCTGAGGCGTCG+AGG + chr4_3:13810774-13810793 Msa0631170:CDS 50.0%
! ACTGGCTTAAAAAGGGTCGG+TGG - chr4_3:13811026-13811045 None:intergenic 50.0%
GGTCTTGGAGCTGATGTTGA+AGG - chr4_3:13811098-13811117 None:intergenic 50.0%
CCTTGCATTGGAACAGGTCT+TGG - chr4_3:13811113-13811132 None:intergenic 50.0%
CCAAGACCTGTTCCAATGCA+AGG + chr4_3:13811110-13811129 Msa0631170:CDS 50.0%
!! CACACTGATTAGGCACTGAC+CGG - chr4_3:13811202-13811221 None:intergenic 50.0%
GTGCCTAATCAGTGTGGTCA+TGG + chr4_3:13811206-13811225 Msa0631170:CDS 50.0%
CATGGATGCTGCTCATCTCT+TGG + chr4_3:13811224-13811243 Msa0631170:CDS 50.0%
ACAACCACCAACTCTCACGG+CGG + chr4_3:13805896-13805915 Msa0631170:CDS 55.0%
GGTTTAGCCGCATTAGGCGA+AGG + chr4_3:13805942-13805961 Msa0631170:CDS 55.0%
TTAGCCGCATTAGGCGAAGG+CGG + chr4_3:13805945-13805964 Msa0631170:CDS 55.0%
GCGTCTTCTTCAGGAGACCA+AGG - chr4_3:13806002-13806021 None:intergenic 55.0%
GCTGATTACACCATCGGAGC+CGG - chr4_3:13806112-13806131 None:intergenic 55.0%
! CGAGTTCGGGTTCTCGTGAA+TGG + chr4_3:13806291-13806310 Msa0631170:intron 55.0%
GTGGTCAAATGTGGCTGGTG+GGG + chr4_3:13806522-13806541 Msa0631170:intron 55.0%
CAACCATGAGCGGCCATTTG+GGG - chr4_3:13807539-13807558 None:intergenic 55.0%
TGCTAACCGGCTAACTGCCT+CGG + chr4_3:13808326-13808345 Msa0631170:intron 55.0%
GTTAACCCGAGGCAGTTAGC+CGG - chr4_3:13808335-13808354 None:intergenic 55.0%
TATCTGGCTAACTGCCCAGC+TGG + chr4_3:13808449-13808468 Msa0631170:intron 55.0%
GAGCAACTCCGGGATATTCG+AGG - chr4_3:13808883-13808902 None:intergenic 55.0%
ATATCCCGGAGTTGCTCCTC+TGG + chr4_3:13808886-13808905 Msa0631170:intron 55.0%
AGATCCAGAGGAGCAACTCC+GGG - chr4_3:13808893-13808912 None:intergenic 55.0%
! AGGGCAGCAATTTGATGGGC+TGG - chr4_3:13809174-13809193 None:intergenic 55.0%
GGTGAAGAAAGGGGAGGGAA+AGG + chr4_3:13809606-13809625 Msa0631170:intron 55.0%
AAGAAAGGGGAGGGAAAGGG+AGG + chr4_3:13809610-13809629 Msa0631170:intron 55.0%
AGAAAGGGGAGGGAAAGGGA+GGG + chr4_3:13809611-13809630 Msa0631170:intron 55.0%
CCCCCAAATTGGAGGGTTTC+TGG + chr4_3:13809803-13809822 Msa0631170:intron 55.0%
GGATAGTTCCCCACTTGGCA+AGG - chr4_3:13809857-13809876 None:intergenic 55.0%
GGGAAAGAGAAAGGGAAGGG+GGG - chr4_3:13809878-13809897 None:intergenic 55.0%
GGGGAAAGAGAAAGGGAAGG+GGG - chr4_3:13809879-13809898 None:intergenic 55.0%
CACAGGCACCATCTTGAGAG+GGG - chr4_3:13810028-13810047 None:intergenic 55.0%
GCACAGGCACCATCTTGAGA+GGG - chr4_3:13810029-13810048 None:intergenic 55.0%
AGCACAGGCACCATCTTGAG+AGG - chr4_3:13810030-13810049 None:intergenic 55.0%
TCCTGGCAGAAGCCTAGCAA+TGG - chr4_3:13810724-13810743 None:intergenic 55.0%
!! ACTCTGAGGCGTCGAGGAAT+TGG + chr4_3:13810780-13810799 Msa0631170:CDS 55.0%
!! CTCTGAGGCGTCGAGGAATT+GGG + chr4_3:13810781-13810800 Msa0631170:CDS 55.0%
!! TCTGAGGCGTCGAGGAATTG+GGG + chr4_3:13810782-13810801 Msa0631170:CDS 55.0%
TCGGTGGATCCCTGACTTCA+TGG - chr4_3:13811010-13811029 None:intergenic 55.0%
CGGTCAGTGCCTAATCAGTG+TGG + chr4_3:13811200-13811219 Msa0631170:CDS 55.0%
! TGATGGGTGATACTGCTGGC+AGG + chr4_3:13811396-13811415 Msa0631170:CDS 55.0%
GATGGGTGATACTGCTGGCA+GGG + chr4_3:13811397-13811416 Msa0631170:CDS 55.0%
TTCGCCGCCTTCGCCTAATG+CGG - chr4_3:13805952-13805971 None:intergenic 60.0%
GAAGGCGGCGAAGGAAGTAG+CGG + chr4_3:13805960-13805979 Msa0631170:CDS 60.0%
GAAGATCGGGGAAGTCGTGC+CGG + chr4_3:13806090-13806109 Msa0631170:CDS 60.0%
GCTAACCGGCTAACTGCCTC+GGG + chr4_3:13808327-13808346 Msa0631170:intron 60.0%
!! GATGGGCTGGATTGCCCAAG+TGG - chr4_3:13809161-13809180 None:intergenic 60.0%
AGGGGGGATAGTTCCCCACT+TGG - chr4_3:13809862-13809881 None:intergenic 60.0%
GCCATTGCTAGGCTTCTGCC+AGG + chr4_3:13810720-13810739 Msa0631170:CDS 60.0%
!! CTGAGGCGTCGAGGAATTGG+GGG + chr4_3:13810783-13810802 Msa0631170:CDS 60.0%
TGCACCGCCGTGAGAGTTGG+TGG - chr4_3:13805903-13805922 None:intergenic 65.0%
TCGTGCACCGCCGTGAGAGT+TGG - chr4_3:13805906-13805925 None:intergenic 65.0%
ACTCTCACGGCGGTGCACGA+CGG + chr4_3:13805906-13805925 Msa0631170:CDS 65.0%
CACGACGGAAGCGGTGACGA+AGG + chr4_3:13805921-13805940 Msa0631170:CDS 65.0%
GCATTAGGCGAAGGCGGCGA+AGG + chr4_3:13805951-13805970 Msa0631170:CDS 65.0%
AGGCCCCAAATGGCCGCTCA+TGG + chr4_3:13807533-13807552 Msa0631170:intron 65.0%
TCGGCTCCCATCCCATGCAC+AGG - chr4_3:13808682-13808701 None:intergenic 65.0%
ACGGCGGTGCACGACGGAAG+CGG + chr4_3:13805912-13805931 Msa0631170:CDS 70.0%
!! GGAAGTCGTGCCGGCTCCGA+TGG + chr4_3:13806099-13806118 Msa0631170:CDS 70.0%
GTGGCTGGTGGGGCCTCACT+TGG + chr4_3:13806532-13806551 Msa0631170:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 13805882 13811667 13805882 ID=Msa0631170;Name=Msa0631170
chr4_3 mRNA 13805882 13811667 13805882 ID=Msa0631170-mRNA-1;Parent=Msa0631170;Name=Msa0631170-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0.5|1|0|1|2|237|335
chr4_3 exon 13805882 13806122 13805882 ID=Msa0631170-mRNA-1:exon:3869;Parent=Msa0631170-mRNA-1
chr4_3 exon 13810664 13811667 13810664 ID=Msa0631170-mRNA-1:exon:3870;Parent=Msa0631170-mRNA-1
chr4_3 CDS 13805882 13806122 13805882 ID=Msa0631170-mRNA-1:cds;Parent=Msa0631170-mRNA-1
chr4_3 CDS 13810664 13811430 13810664 ID=Msa0631170-mRNA-1:cds;Parent=Msa0631170-mRNA-1
chr4_3 three_prime_UTR 13811431 13811667 13811431 ID=Msa0631170-mRNA-1:three_prime_utr;Parent=Msa0631170-mRNA-1
Gene Sequence

>Msa0631170

ATGGAACCAGAACAACAACCACCAACTCTCACGGCGGTGCACGACGGAAGCGGTGACGAAGGTTTAGCCGCATTAGGCGAAGGCGGCGAAGGAAGTAGCGGTAGCAAAGTGAAAGGACCTTGGTCTCCTGAAGAAGACGCCATTCTCAGTCGTCTTGTTAGTCAGTTCGGTGCTAGAAACTGGAGTTTGATTGCTCGTGGAATTTCTGGAAGATCGGGGAAGTCGTGCCGGCTCCGATGGTATGAGGAGGACCGGATCATAGTTGCTGCTCATGCAATCCATGGAAACAAATGGGCAGCCATTGCTAGGCTTCTGCCAGGAAGAACAGATAATGCCATTAAGAACCACTGGAATTCTACTCTGAGGCGTCGAGGAATTGGGGGAGTTGAACATGATAATACTAAGTTAGAATCTAGTAACATAGGGGGAAATATCAGCTTGGAGAAAGCCAAAGCATCATCTGAAGAAACTCTATCATGTGGAGATGTTAATTCTTTGAAATCCTCAGAAGGAAGAGATGTTAGTTCTATGGAGATTGTGGATGATAAAAATGAAGACAAAGCAAGGACTGATGTTCAATTATACCATGAAGTCAGGGATCCACCGACCCTTTTTAAGCCAGTAGCACGTGTAAGTGCTTTTAATGCGTATAACGCTTTCAATGGTTCCCAACCTTCAACATCAGCTCCAAGACCTGTTCCAATGCAAGGACCTATTTTACATTCACCAAAATCAGATGCGGAAATTTGTAAAATGCTTAACAGAACTATTGTCGACCGGTCAGTGCCTAATCAGTGTGGTCATGGATGCTGCTCATCTCTTGGTAACAACTCCAAAAGCTCTTTGTTGGGACCAGACTTCATTGAATATTCAGAACCTCAATCTTTCACAAGTTTTGAGTTGGCTGCAATAGCTACAGACATTAGTAACCTTGCTTGGCTTAAAAGTGGATTGGAGAACAGCAGCGTCAAAATGATGGGTGATACTGCTGGCAGGGTTAATATCTAA
Protein sequence

>Msa0631170

MEPEQQPPTLTAVHDGSGDEGLAALGEGGEGSSGSKVKGPWSPEEDAILSRLVSQFGARNWSLIARGISGRSGKSCRLRWYEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGIGGVEHDNTKLESSNIGGNISLEKAKASSEETLSCGDVNSLKSSEGRDVSSMEIVDDKNEDKARTDVQLYHEVRDPPTLFKPVARVSAFNAYNAFNGSQPSTSAPRPVPMQGPILHSPKSDAEICKMLNRTIVDRSVPNQCGHGCCSSLGNNSKSSLLGPDFIEYSEPQSFTSFELAAIATDISNLAWLKSGLENSSVKMMGDTAGRVNI*