AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0632720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0632720 MtrunA17_Chr4g0010751 96.315 1194 28 1 1 1178 1 1194 0.0 2380
Msa0632720 MtrunA17_Chr3g0087501 78.799 816 146 5 389 1178 8 822 0.0 1355
Msa0632720 MtrunA17_Chr1g0174581 70.469 789 213 4 408 1178 11 797 0.0 1197
Msa0632720 MtrunA17_Chr7g0258331 68.766 762 221 7 429 1178 19 775 0.0 1115
Msa0632720 MtrunA17_Chr1g0174761 67.779 779 230 8 410 1178 7 774 0.0 1100
Msa0632720 MtrunA17_Chr4g0033151 66.026 780 241 8 408 1178 6 770 0.0 1055
Msa0632720 MtrunA17_Chr5g0397601 63.957 738 254 6 445 1178 278 1007 0.0 1021
Msa0632720 MtrunA17_Chr5g0397601 39.855 138 82 1 1 138 4 140 2.30e-23 107
Msa0632720 MtrunA17_Chr4g0014711 58.458 804 321 6 382 1178 247 1044 0.0 959
Msa0632720 MtrunA17_Chr4g0014711 33.696 184 95 5 2 183 3 161 8.69e-19 92.8
Msa0632720 MtrunA17_Chr8g0349231 54.033 781 336 7 411 1178 233 1003 0.0 892
Msa0632720 MtrunA17_Chr8g0349231 44.030 134 75 0 1 134 4 137 7.73e-25 112
Msa0632720 MtrunA17_Chr7g0247271 57.102 697 277 7 493 1178 281 966 0.0 832
Msa0632720 MtrunA17_Chr7g0247271 40.141 142 78 3 1 139 81 218 1.37e-21 101
Msa0632720 MtrunA17_Chr4g0060191 51.463 752 316 14 446 1178 317 1038 0.0 756
Msa0632720 MtrunA17_Chr4g0060191 42.424 132 73 2 2 130 18 149 4.02e-21 100
Msa0632720 MtrunA17_Chr4g0028371 52.483 745 328 11 445 1178 54 783 0.0 754
Msa0632720 MtrunA17_Chr4g0035961 49.933 745 296 12 445 1178 54 732 0.0 719
Msa0632720 MtrunA17_Chr6g0461151 47.568 740 353 12 456 1178 305 1026 0.0 718
Msa0632720 MtrunA17_Chr6g0461151 41.538 130 75 1 2 130 6 135 5.62e-24 109
Msa0632720 MtrunA17_Chr6g0460791 48.649 740 335 12 457 1178 297 1009 0.0 709
Msa0632720 MtrunA17_Chr6g0460791 46.512 129 69 0 2 130 11 139 2.25e-28 124
Msa0632720 MtrunA17_Chr1g0151051 44.293 736 374 12 463 1178 79 798 0.0 596
Msa0632720 MtrunA17_Chr5g0447321 39.463 745 418 15 446 1178 40 763 1.97e-172 527
Msa0632720 MtrunA17_Chr4g0010641 90.769 130 10 1 1048 1177 1 128 1.27e-72 237
Msa0632720 MtrunA17_Chr4g0010701 68.269 104 11 1 1051 1154 16 97 6.02e-38 137
Msa0632720 MtrunA17_Chr6g0461171 41.538 130 75 1 2 130 6 135 1.98e-26 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0632720 AT5G48060.1 73.834 772 188 5 419 1178 267 1036 0.0 1222
Msa0632720 AT5G48060.1 42.586 263 105 7 2 259 6 227 5.57e-44 174
Msa0632720 AT5G06850.1 70.596 789 211 5 408 1178 9 794 0.0 1208
Msa0632720 AT3G57880.4 67.862 781 225 10 410 1178 7 773 0.0 1112
Msa0632720 AT3G57880.2 67.862 781 225 10 410 1178 7 773 0.0 1112
Msa0632720 AT3G57880.3 67.862 781 225 10 410 1178 7 773 0.0 1112
Msa0632720 AT3G57880.1 67.862 781 225 10 410 1178 7 773 0.0 1112
Msa0632720 AT1G51570.1 67.308 780 234 8 410 1178 7 776 0.0 1098
Msa0632720 AT5G12970.1 67.310 777 229 9 411 1178 9 769 0.0 1087
Msa0632720 AT4G11610.2 64.315 737 251 6 445 1178 280 1007 0.0 1034
Msa0632720 AT4G11610.2 37.662 154 94 2 1 154 6 157 1.84e-25 114
Msa0632720 AT4G11610.1 64.315 737 251 6 445 1178 284 1011 0.0 1034
Msa0632720 AT4G11610.1 37.908 153 93 2 1 153 6 156 3.22e-25 114
Msa0632720 AT4G11610.3 64.315 737 251 6 445 1178 147 874 0.0 1032
Msa0632720 AT1G22610.1 60.680 735 283 3 445 1178 300 1029 0.0 956
Msa0632720 AT1G22610.1 47.651 149 72 4 2 146 3 149 4.17e-31 133
Msa0632720 AT4G00700.1 53.836 756 340 7 427 1178 256 1006 0.0 861
Msa0632720 AT4G00700.1 31.013 158 94 2 1 158 4 146 2.79e-14 78.6
Msa0632720 AT4G00700.2 53.836 756 340 7 427 1178 256 1006 0.0 861
Msa0632720 AT4G00700.2 31.013 158 94 2 1 158 4 146 2.79e-14 78.6
Msa0632720 AT1G04150.1 53.951 810 323 12 396 1178 226 1012 0.0 853
Msa0632720 AT1G04150.1 49.618 131 65 1 2 132 12 141 1.03e-32 138
Msa0632720 AT3G61300.1 52.833 812 327 19 385 1178 199 972 0.0 832
Msa0632720 AT4G20080.1 54.785 721 315 7 461 1178 62 774 0.0 829
Msa0632720 AT1G74720.1 51.587 756 327 14 446 1178 342 1081 0.0 756
Msa0632720 AT1G74720.1 43.066 137 75 1 2 135 18 154 2.04e-25 114
Msa0632720 AT5G17980.1 49.728 736 338 13 455 1178 334 1049 0.0 727
Msa0632720 AT5G17980.1 44.361 133 69 3 2 130 6 137 1.03e-24 112
Msa0632720 AT3G03680.1 50.541 740 318 15 463 1178 302 1017 0.0 726
Msa0632720 AT3G03680.1 41.667 132 72 2 2 131 8 136 2.61e-23 107
Msa0632720 AT3G61720.1 38.391 758 403 20 460 1178 63 795 1.31e-146 461
Msa0632720 AT5G03435.1 39.077 737 393 22 445 1171 49 739 1.76e-143 451
Msa0632720 AT5G03435.2 41.187 539 281 14 445 978 49 556 2.50e-117 375
Msa0632720 AT5G44760.1 43.250 400 184 10 409 803 3 364 1.67e-89 297
Msa0632720 AT5G44760.1 37.226 137 37 1 944 1080 364 451 1.52e-18 90.9

Find 256 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTAACATGTTTCATATTTA+TGG 0.068316 4_3:-17153171 Msa0632720:CDS
CAGTTCTTGTTCTGCTTAAT+TGG 0.169643 4_3:+17155933 None:intergenic
ACATGTTCTTGATTGGCTTA+TGG 0.218726 4_3:-17152795 Msa0632720:CDS
TCTTCTCATGCTCCATATAT+TGG 0.234655 4_3:+17152990 None:intergenic
AGATTCTTCAATGGAGTAAT+TGG 0.239489 4_3:+17155415 None:intergenic
GGTTGTAAATAATGCATCTT+TGG 0.256347 4_3:+17153135 None:intergenic
CCAACATGGAGTTAAGAAAA+TGG 0.265685 4_3:-17153235 Msa0632720:CDS
GTGGATTCTGGTTCTTGTTT+AGG 0.268598 4_3:+17155575 None:intergenic
ACTCTTAAATACCATAGTTT+TGG 0.272632 4_3:+17154086 None:intergenic
TGAAGATTGAATCCGGTCTT+TGG 0.278771 4_3:+17154403 None:intergenic
ACCAAAACCACAACTCTAAA+TGG 0.288290 4_3:+17152472 None:intergenic
TTTCTCTACATGTTCTTGAT+TGG 0.297247 4_3:-17152802 Msa0632720:CDS
TCCACTTTGGAATGAAGATT+TGG 0.298039 4_3:-17153940 Msa0632720:CDS
TGTGTATTGCTCATTCCATT+TGG 0.306557 4_3:+17153440 None:intergenic
ACCATTTAGAGTTGTGGTTT+TGG 0.314071 4_3:-17152473 Msa0632720:CDS
ATACTTGAGATGGGCATCTT+AGG 0.317065 4_3:-17153582 Msa0632720:CDS
CTACTAAAATCCTTGGTTGT+TGG 0.321348 4_3:+17154892 None:intergenic
ATTTGAGACATCCAAAGTTT+AGG 0.324370 4_3:-17152435 Msa0632720:CDS
TCAATTAAAGACTCAAGAAT+TGG 0.325561 4_3:-17153333 Msa0632720:CDS
TAAAATCCTTGGTTGTTGAT+TGG 0.325824 4_3:+17155052 None:intergenic
GCTGATCCTTCACCATCTTT+TGG 0.325938 4_3:+17155986 None:intergenic
AAAATCCTTGGTTGTTGATT+GGG 0.326006 4_3:+17155053 None:intergenic
AGCCTTGAGAAATTTGGTTT+TGG 0.327085 4_3:-17153762 Msa0632720:CDS
TGGTTTAGCCTTGAGAAATT+TGG 0.329721 4_3:-17153768 Msa0632720:CDS
GCATACTGTGTTGCTAAATA+TGG 0.330296 4_3:-17153507 Msa0632720:CDS
CATCTTAGAGTTTGCCTTGA+AGG 0.332712 4_3:-17153690 Msa0632720:CDS
GTGTATTGCTCATTCCATTT+GGG 0.333679 4_3:+17153441 None:intergenic
GCGAATCTTCACAATGCCTT+GGG 0.333937 4_3:+17155000 None:intergenic
TTAATCAAATTGACAACTTA+AGG 0.335877 4_3:-17153104 Msa0632720:CDS
GTTTCTGTCAAGGCTCAATT+AGG 0.336587 4_3:-17154008 Msa0632720:CDS
CAGCTTGAAGTGATTGTTCC+TGG 0.347665 4_3:+17154524 None:intergenic
GGTTCTTCGATCTCTATCTT+TGG 0.349733 4_3:+17155362 None:intergenic
AGGTTAGTATCAGTGGATTC+TGG 0.351691 4_3:+17155563 None:intergenic
GGTTCTTGTTTAGGAGTAGA+AGG 0.352396 4_3:+17155584 None:intergenic
GGTCTAGTCTCTTCTCAAAA+AGG 0.360889 4_3:+17153811 None:intergenic
GAAAGTGTCTAAAAGTGTTC+TGG 0.362687 4_3:+17153467 None:intergenic
TGAGGAGCCAGTGGACTATC+TGG 0.366664 4_3:+17154281 None:intergenic
TTCTAATGTTTCTGTGGTTG+AGG 0.368739 4_3:+17155520 None:intergenic
TGTTCTAGTGGAACAAATCT+TGG 0.377474 4_3:+17153968 None:intergenic
CCTAGCTTCACTTCCACATA+AGG 0.378328 4_3:+17154497 None:intergenic
GAGCTTATGATGGAAGAAAA+TGG 0.380670 4_3:-17154740 Msa0632720:CDS
TCATCTGTTAAGGGTGAGAT+TGG 0.384635 4_3:-17155686 Msa0632720:CDS
AAATCTTGGTCTTCAGTACT+TGG 0.384869 4_3:+17153982 None:intergenic
TTACCCTTCCGAGGAAGTTT+CGG 0.385159 4_3:+17155786 None:intergenic
GGTAGTTTGTTCCTAAACTT+TGG 0.389947 4_3:+17152424 None:intergenic
TGACCATCCTTCATCTTCAT+AGG 0.390527 4_3:+17153543 None:intergenic
AACAAGAAGTGGATAAGAAT+TGG 0.390724 4_3:+17153263 None:intergenic
AGGAGGAAGGTTAGTATCAG+TGG 0.393393 4_3:+17155556 None:intergenic
TTTATGTGTCTCCAAAACTA+TGG 0.403761 4_3:-17154097 Msa0632720:CDS
TGAGAAGATATCTGTTCAAC+AGG 0.404721 4_3:+17155341 None:intergenic
CAGCTATGGAAGCAGCCTAT+TGG 0.405191 4_3:-17153606 Msa0632720:CDS
CTATCTGGTGGAACTCTTGT+TGG 0.409272 4_3:+17154296 None:intergenic
TGGATGTTGATTCCAATATA+TGG 0.413618 4_3:-17153002 Msa0632720:CDS
TGCGAATCTTCACAATGCCT+TGG 0.415004 4_3:+17154999 None:intergenic
GCGACATTATGCTCGCAGTT+TGG 0.417788 4_3:-17154214 Msa0632720:CDS
GTTGTAAATAATGCATCTTT+GGG 0.425973 4_3:+17153136 None:intergenic
CCTTCAAAAGATGAGGTACT+TGG 0.426155 4_3:-17153855 Msa0632720:CDS
CATTATGCTCGCAGTTTGGA+TGG 0.428047 4_3:-17154210 Msa0632720:CDS
TTGCAACAATATTCATTGCT+TGG 0.428944 4_3:+17153079 None:intergenic
CAAGTCGGTAGTATAAGTTC+TGG 0.431038 4_3:+17152826 None:intergenic
AACTCTTCGTCAAGTTCATC+AGG 0.431131 4_3:+17152703 None:intergenic
TTCAAAGTCTACTTCAACAA+AGG 0.432326 4_3:+17155958 None:intergenic
TCTAATGTTTCTGTGGTTGA+GGG 0.432789 4_3:+17155521 None:intergenic
GTCTTTAATTGAACTTCCAC+TGG 0.432834 4_3:+17153344 None:intergenic
ATGGGCATCTTAGGAGCAAA+AGG 0.433353 4_3:-17153573 Msa0632720:CDS
GAGTGACAGAAACCGCTTAC+CGG 0.433821 4_3:-17154033 Msa0632720:CDS
TTGTAATCAAACCGGAGAAA+AGG 0.437601 4_3:+17152938 None:intergenic
GGTTCAATGACGTTTGTCAT+TGG 0.437684 4_3:-17152906 Msa0632720:CDS
TGCTCAAATATTGTTAAAGA+AGG 0.438047 4_3:-17155755 Msa0632720:CDS
TGTAGCAGCTGAACCATTTG+AGG 0.438121 4_3:-17153913 Msa0632720:CDS
CGTCTCTTGATTGAAATCCT+TGG 0.450285 4_3:+17155167 None:intergenic
GGTAGGATTCAAACAATTGT+TGG 0.454472 4_3:-17152610 Msa0632720:CDS
TTGCTAAATATGGTCAGAAA+TGG 0.456431 4_3:-17153497 Msa0632720:CDS
ATTGTCAACTGCTCCTCAAA+TGG 0.457329 4_3:+17153900 None:intergenic
GTAGGAAGAGATGATTATCT+AGG 0.460366 4_3:-17154347 Msa0632720:CDS
AGTGCAGAACCTTCTTCGTT+AGG 0.461837 4_3:+17155491 None:intergenic
TAATGCATCTTTGGGAGTAA+AGG 0.463165 4_3:+17153144 None:intergenic
AAACATGGTATCCACCTTCA+AGG 0.464609 4_3:+17153676 None:intergenic
TGTAATCAAACCGGAGAAAA+GGG 0.472002 4_3:+17152939 None:intergenic
TAAAATCCTTGGTTGTTGGT+TGG 0.473742 4_3:+17154896 None:intergenic
GATAGACTTAGAACCGTTGC+AGG 0.473975 4_3:-17152631 Msa0632720:CDS
AGTAAACTATCTGTTCTAGC+AGG 0.481189 4_3:+17152370 None:intergenic
GAATTGGAAAGGTAAGGATT+AGG 0.484112 4_3:-17153317 Msa0632720:CDS
TTCTCCGGTTTGATTACAAT+CGG 0.485040 4_3:-17152934 Msa0632720:CDS
CAACATGGAGTTAAGAAAAT+GGG 0.485762 4_3:-17153234 Msa0632720:CDS
TTCCATAGCTGTCTTGCTGT+TGG 0.486334 4_3:+17153618 None:intergenic
CAAGAACTGAAGATTGAATC+CGG 0.491049 4_3:+17154396 None:intergenic
TAGACACTTTCAGTCCCAAA+TGG 0.491312 4_3:-17153455 Msa0632720:CDS
TGCGGATCAACACCGTGCCT+TGG 0.493177 4_3:+17154843 None:intergenic
TGATTGGCTTATGGAACTAT+CGG 0.495517 4_3:-17152786 Msa0632720:CDS
TGCAACACCATTTAGAGTTG+TGG 0.497145 4_3:-17152479 Msa0632720:CDS
ATGAAGCTTTCTCAGATGCT+TGG 0.498051 4_3:-17154175 Msa0632720:CDS
GTTTGATTACAATCGGAAGA+TGG 0.501241 4_3:-17152927 Msa0632720:CDS
TCCATGTGAGGCGGTTGTCT+CGG 0.503972 4_3:+17152757 None:intergenic
CCCAGTGGTGGAGCTTATGA+TGG 0.504295 4_3:-17154750 Msa0632720:CDS
AGGAAGTTTCGGCCAGGGAT+CGG 0.506791 4_3:+17155797 None:intergenic
ATCAGCTTCTAATGTTTCTG+TGG 0.507269 4_3:+17155514 None:intergenic
TCTGATGCTGCTACTGTCTA+CGG 0.507368 4_3:-17154149 Msa0632720:CDS
TTCCGAGTAATTTCTTCAAG+AGG 0.507844 4_3:-17152396 Msa0632720:CDS
GCCTATTGGAATACTTGAGA+TGG 0.508124 4_3:-17153592 Msa0632720:CDS
GCAAATACTTGGTTCCACTC+TGG 0.508204 4_3:+17154431 None:intergenic
TCAATTTGATTAACTGTGAA+AGG 0.509705 4_3:+17153114 None:intergenic
TCCATCATAAGCTCCACCAC+TGG 0.510265 4_3:+17154749 None:intergenic
CCTTATGTGGAAGTGAAGCT+AGG 0.510433 4_3:-17154497 Msa0632720:CDS
TTAATCCACAAGTCCATCCT+AGG 0.512250 4_3:-17154947 Msa0632720:CDS
TTAATCCACAAGTCCATCCT+AGG 0.512250 4_3:-17155103 Msa0632720:CDS
TTAACTGAGTATGTCGTTGA+TGG 0.513650 4_3:+17155122 None:intergenic
ATCTTTCATCATACCTAGGA+TGG 0.514560 4_3:+17154934 None:intergenic
ATCTTTCATCATACCTAGGA+TGG 0.514560 4_3:+17155090 None:intergenic
ACAAACAGTGTAGTTCCTCT+AGG 0.515817 4_3:+17152535 None:intergenic
ACATGGATACTAAACTCTCA+TGG 0.515868 4_3:-17152741 Msa0632720:CDS
CTTTGTCAAAGATAAAGAAA+TGG 0.516783 4_3:-17154369 Msa0632720:CDS
ATCCCTGGCCGAAACTTCCT+CGG 0.519385 4_3:-17155794 Msa0632720:CDS
CCCATCTCAAGTATTCCAAT+AGG 0.520688 4_3:+17153591 None:intergenic
ATAGTCCACTGGCTCCTCAA+TGG 0.521122 4_3:-17154277 Msa0632720:CDS
ACTGAGTATGTTGTTGATGA+AGG 0.521246 4_3:+17154969 None:intergenic
CGAATCTTCACAATGCCTTG+GGG 0.522003 4_3:+17155001 None:intergenic
GGTTTATGTCTCTACTGAGC+TGG 0.522388 4_3:-17152564 Msa0632720:CDS
CTTCCGAGGAAGTTTCGGCC+AGG 0.526973 4_3:+17155791 None:intergenic
GTGAAGCTAGGGAACTATAG+AGG 0.528000 4_3:-17154485 Msa0632720:CDS
CTAGAACAACTACTCCACTT+TGG 0.529455 4_3:-17153953 Msa0632720:CDS
GCATCATGTGATCTTGATGT+TGG 0.532103 4_3:+17152670 None:intergenic
ACTCAAGAATTGGAAAGGTA+AGG 0.533081 4_3:-17153323 Msa0632720:CDS
CTAAACCAACGAGAATGAAC+CGG 0.533507 4_3:+17153783 None:intergenic
GAAACTACTAATCCACAGAT+TGG 0.533854 4_3:-17154783 Msa0632720:CDS
GGAGGAATACCTTGTGGTCG+CGG 0.535022 4_3:+17155143 None:intergenic
TACCTTCGCCTCGCAAGTGT+TGG 0.536284 4_3:+17154246 None:intergenic
GGTAAGCGGTTTCTGTCACT+CGG 0.536551 4_3:+17154035 None:intergenic
GAAGCTGATCCTAACGAAGA+AGG 0.537166 4_3:-17155500 Msa0632720:CDS
ACACTTGCGAGGCGAAGGTA+TGG 0.537404 4_3:-17154243 Msa0632720:CDS
CTTAGAGTTTGCCTTGAAGG+TGG 0.539915 4_3:-17153687 Msa0632720:CDS
CCTTGCACTGTCATAACACT+AGG 0.540274 4_3:-17153402 Msa0632720:CDS
CTCCAACACTTGCGAGGCGA+AGG 0.540743 4_3:-17154248 Msa0632720:CDS
TGTTGGTGTAAAACAAGAAG+TGG 0.544579 4_3:+17153252 None:intergenic
CACATGATGCAGTGAGAATG+AGG 0.544734 4_3:-17152657 Msa0632720:CDS
AAAGCAAAGGATCTTACTCC+AGG 0.544999 4_3:-17154542 Msa0632720:CDS
GGTGTCTCTACTAAAATCCT+TGG 0.548577 4_3:+17154885 None:intergenic
TTCCGAGGAAGTTTCGGCCA+GGG 0.550728 4_3:+17155792 None:intergenic
ATCCACAGATTGGTGAAAAG+TGG 0.551923 4_3:-17154773 Msa0632720:CDS
TTGATCACTAATGTACAAAG+TGG 0.552764 4_3:+17153644 None:intergenic
GACCATCCTTCATCTTCATA+GGG 0.555042 4_3:+17153544 None:intergenic
AAGAGACGACCGCGACCACA+AGG 0.557068 4_3:-17155152 Msa0632720:CDS
TGTTTGAATCCTACCTGCAA+CGG 0.559659 4_3:+17152618 None:intergenic
GCATCTTTGGGAGTAAAGGT+TGG 0.559776 4_3:+17153148 None:intergenic
GACCAACAGCAAGACAGCTA+TGG 0.560999 4_3:-17153620 Msa0632720:CDS
TCCGAGACAACCGCCTCACA+TGG 0.561124 4_3:-17152758 Msa0632720:CDS
GGTGTCTCTACTAAAATCCT+TGG 0.562058 4_3:+17155041 None:intergenic
TTCAAGCTGTGATCCTTATG+TGG 0.562461 4_3:-17154510 Msa0632720:CDS
AAGTCTCCGTCTACAACGAT+AGG 0.563311 4_3:-17155826 Msa0632720:CDS
AATATTGTTGCAATGAGGCT+TGG 0.567274 4_3:-17153069 Msa0632720:CDS
CCATCATAAGCTCCACCACT+GGG 0.568597 4_3:+17154750 None:intergenic
TCTTCCGATTGTAATCAAAC+CGG 0.568645 4_3:+17152930 None:intergenic
AAGTGGAGTAGTTGTTCTAG+TGG 0.568695 4_3:+17153956 None:intergenic
GCACGGCTAGATTGAAGTTG+AGG 0.568699 4_3:+17155227 None:intergenic
ACTAGACTGAGATTCTTCAA+TGG 0.570823 4_3:+17155406 None:intergenic
GCTTCTCCCTATGAAGATGA+AGG 0.572881 4_3:-17153550 Msa0632720:CDS
TCATTGCTAGTGTGGACTTG+CGG 0.574933 4_3:+17154825 None:intergenic
ATGACTCCAACATGCAGCCA+AGG 0.575452 4_3:-17155184 Msa0632720:CDS
GAGGGAGTACCGTGGAGAGG+AGG 0.575658 4_3:+17155539 None:intergenic
GATAGGAGACAACCGATCCC+TGG 0.576245 4_3:-17155809 Msa0632720:CDS
ACAGACCGGTTCATTCTCGT+TGG 0.579379 4_3:-17153788 Msa0632720:CDS
ATTATGCTCGCAGTTTGGAT+GGG 0.579770 4_3:-17154209 Msa0632720:CDS
CTGGCCGAAACTTCCTCGGA+AGG 0.581069 4_3:-17155790 Msa0632720:CDS
TAAAGACTCAAGAATTGGAA+AGG 0.581591 4_3:-17153328 Msa0632720:CDS
AAGAAATTACTCGGAACAGA+AGG 0.581611 4_3:+17152403 None:intergenic
CATGGATACTAAACTCTCAT+GGG 0.581762 4_3:-17152740 Msa0632720:CDS
CATGATCTTATGCCAAAAGA+TGG 0.583363 4_3:-17155998 Msa0632720:CDS
CTTATGTGGAAGTGAAGCTA+GGG 0.583548 4_3:-17154496 Msa0632720:CDS
TCATACCTAGGATGGACTTG+TGG 0.584271 4_3:+17154942 None:intergenic
TCATACCTAGGATGGACTTG+TGG 0.584271 4_3:+17155098 None:intergenic
CTTACCGGAGGTTTCTGTCA+AGG 0.584368 4_3:-17154018 Msa0632720:CDS
AGCTGAACCGCCACTCAGGA+AGG 0.584731 4_3:-17153043 Msa0632720:CDS
GTAAACTATCTGTTCTAGCA+GGG 0.588256 4_3:+17152371 None:intergenic
ACAACTTCCTTCCTGAGTGG+CGG 0.589068 4_3:+17153036 None:intergenic
GCTGCTACTGTCTACGGTGA+AGG 0.589821 4_3:-17154143 Msa0632720:CDS
TGATGAAAGATACAATCTCA+AGG 0.590548 4_3:-17154922 Msa0632720:CDS
CAAACAGTGTAGTTCCTCTA+GGG 0.590936 4_3:+17152536 None:intergenic
TCTTTAACAATATTTGAGCA+AGG 0.593652 4_3:+17155758 None:intergenic
ACCAAATCTTCATTCCAAAG+TGG 0.595084 4_3:+17153939 None:intergenic
CACCAAAACCAAATTTCTCA+AGG 0.595695 4_3:+17153760 None:intergenic
CAATGAATATTGTTGCAATG+AGG 0.597826 4_3:-17153074 Msa0632720:CDS
TTGTATCTTTCATCATACCT+AGG 0.598107 4_3:+17154930 None:intergenic
TTGTATCTTTCATCATACCT+AGG 0.598107 4_3:+17155086 None:intergenic
CCTATTGGAATACTTGAGAT+GGG 0.598292 4_3:-17153591 Msa0632720:CDS
CCTAGTGTTATGACAGTGCA+AGG 0.599775 4_3:+17153402 None:intergenic
GGTGAAAAGTGGCCCAGTGG+TGG 0.599914 4_3:-17154762 Msa0632720:CDS
GTAAGCGGTTTCTGTCACTC+GGG 0.602202 4_3:+17154036 None:intergenic
AGCCTCTTGAAGAAATTACT+CGG 0.603115 4_3:+17152394 None:intergenic
TGATGAAAGATACAATCTCA+AGG 0.604400 4_3:-17155078 Msa0632720:CDS
GTCAAAGATAAAGAAATGGT+AGG 0.607225 4_3:-17154365 Msa0632720:CDS
GAGTACCGTGGAGAGGAGGA+AGG 0.607599 4_3:+17155543 None:intergenic
CTCCCTATGAAGATGAAGGA+TGG 0.607986 4_3:-17153546 Msa0632720:CDS
CTTCAAAAGATGAGGTACTT+GGG 0.608692 4_3:-17153854 Msa0632720:CDS
TGACAGAAACCGCTTACCGG+AGG 0.611239 4_3:-17154030 Msa0632720:CDS
ACATAGCTACACAAGGGGAG+AGG 0.614375 4_3:-17152585 Msa0632720:CDS
AAGGAATTCTTACCCTTCCG+AGG 0.614401 4_3:+17155777 None:intergenic
ACTGAGTATGTCGTTGATGG+AGG 0.615323 4_3:+17155125 None:intergenic
GGAAGTTGTTGAGTACATGC+TGG 0.617352 4_3:-17153022 Msa0632720:CDS
GACATGTTGCTTCATCTCCA+AGG 0.617370 4_3:-17154860 Msa0632720:CDS
TGAAATCCTTGGCTGCATGT+TGG 0.617915 4_3:+17155178 None:intergenic
TCTTTAATTGAACTTCCACT+GGG 0.618320 4_3:+17153345 None:intergenic
GTAGAGCTGAACCGCCACTC+AGG 0.618337 4_3:-17153047 Msa0632720:CDS
GATGAAAGATACAATCTCAA+GGG 0.619853 4_3:-17154921 Msa0632720:CDS
TGACAGAAACCTCCGGTAAG+CGG 0.621065 4_3:+17154021 None:intergenic
GGATATGAAACTGATAGTAG+AGG 0.621521 4_3:-17156032 None:intergenic
TTGTCTCCTATCGTTGTAGA+CGG 0.623288 4_3:+17155820 None:intergenic
CTGTACCATTGAGGAGCCAG+TGG 0.623960 4_3:+17154272 None:intergenic
GATGAAAGATACAATCTCAA+GGG 0.626674 4_3:-17155077 Msa0632720:CDS
TGGGCATCTTAGGAGCAAAA+GGG 0.627904 4_3:-17153572 Msa0632720:CDS
ATGAAGATGAAGGATGGTCA+TGG 0.628002 4_3:-17153540 Msa0632720:CDS
TGAGCCTTGACAGAAACCTC+CGG 0.628506 4_3:+17154014 None:intergenic
TGGCCGAAACTTCCTCGGAA+GGG 0.630037 4_3:-17155789 Msa0632720:CDS
CGAGGCGAAGGTATGGTGAG+AGG 0.631850 4_3:-17154236 Msa0632720:CDS
AAGTGGATTCATCTAAAACA+TGG 0.635329 4_3:+17153661 None:intergenic
TGTTGGAGTCTGTACCATTG+AGG 0.635853 4_3:+17154263 None:intergenic
AGTTCCACCAGATAGTCCAC+TGG 0.636946 4_3:-17154288 Msa0632720:CDS
GGAAGAAAATGGACGAGTAG+TGG 0.637972 4_3:-17154729 Msa0632720:CDS
TGTGCAACCTTCAAAAGATG+AGG 0.639303 4_3:-17153862 Msa0632720:CDS
GGAGATGAAGCAACATGTCG+AGG 0.641830 4_3:+17154864 None:intergenic
AGAAGAAATTGAATCCAGAG+TGG 0.643753 4_3:-17154445 Msa0632720:CDS
GCAGTTGACAATAACTGTGG+AGG 0.650184 4_3:-17153889 Msa0632720:CDS
GGAGCCAGTGGACTATCTGG+TGG 0.650431 4_3:+17154284 None:intergenic
GAATCTTCACAATGCCTTGG+GGG 0.651377 4_3:+17155002 None:intergenic
GACTTAGAACCGTTGCAGGT+AGG 0.652830 4_3:-17152627 Msa0632720:CDS
GTTGAGGGAGTACCGTGGAG+AGG 0.654079 4_3:+17155536 None:intergenic
ACTAACCTTCCTCCTCTCCA+CGG 0.655181 4_3:-17155548 Msa0632720:CDS
AGAAAATCACAGCTGCACAA+AGG 0.656451 4_3:+17152503 None:intergenic
GTTGCTTCATCTCCAAGGCA+CGG 0.657348 4_3:-17154855 Msa0632720:CDS
AACGAGAATGAACCGGTCTG+TGG 0.660596 4_3:+17153790 None:intergenic
ATTGTGATTAGATTCTCTTG+TGG 0.662247 4_3:+17155263 None:intergenic
GAAGAGACTAGACCACAGAC+CGG 0.669946 4_3:-17153802 Msa0632720:CDS
CTTATGCCAAAAGATGGTGA+AGG 0.670328 4_3:-17155992 Msa0632720:CDS
TACAGACTCCAACACTTGCG+AGG 0.674262 4_3:-17154254 Msa0632720:CDS
CTGAGCTGGAGAGACCCTAG+AGG 0.676249 4_3:-17152550 Msa0632720:CDS
AGTTTAGTATCCATGTGAGG+CGG 0.683315 4_3:+17152748 None:intergenic
CAAAAGATGAGGTACTTGGG+AGG 0.684274 4_3:-17153851 Msa0632720:CDS
AGGCATTGTGAAGATTCGCA+AGG 0.687330 4_3:-17154996 Msa0632720:CDS
TGACGAAAACTACAGTGTCG+AGG 0.687343 4_3:-17154805 Msa0632720:CDS
AGGGAACCAACCAACAACCA+AGG 0.690986 4_3:-17154902 Msa0632720:CDS
AGGGACCCAATCAACAACCA+AGG 0.690986 4_3:-17155058 Msa0632720:CDS
GTTGGCGACATAGCTACACA+AGG 0.694488 4_3:-17152592 Msa0632720:CDS
TGTTCGCGTAGTGAAAGCAA+AGG 0.697415 4_3:-17154555 Msa0632720:intron
GAATGAGCAATACACATGGG+AGG 0.698660 4_3:-17153433 Msa0632720:CDS
CTGTGGTTGAGGGAGTACCG+TGG 0.699513 4_3:+17155531 None:intergenic
TGGCGACATAGCTACACAAG+GGG 0.700275 4_3:-17152590 Msa0632720:CDS
GAGAGTTTAGTATCCATGTG+AGG 0.700515 4_3:+17152745 None:intergenic
TTGGCGACATAGCTACACAA+GGG 0.709093 4_3:-17152591 Msa0632720:CDS
TCAACAACTTCCTTCCTGAG+TGG 0.709866 4_3:+17153033 None:intergenic
ATGGAATGAGCAATACACAT+GGG 0.710143 4_3:-17153436 Msa0632720:CDS
AACATGTAGAGAAAACAAGT+CGG 0.710804 4_3:+17152811 None:intergenic
GGAGCAGTTGACAATAACTG+TGG 0.710993 4_3:-17153892 Msa0632720:CDS
GTGAGCTTCAACTCACAGTG+AGG 0.717293 4_3:-17153212 Msa0632720:CDS
CTCTTGTTGGAATCTCATCG+AGG 0.724183 4_3:+17154309 None:intergenic
AATGGAATGAGCAATACACA+TGG 0.730155 4_3:-17153437 Msa0632720:CDS
ATTGGTGAAAAGTGGCCCAG+TGG 0.746282 4_3:-17154765 Msa0632720:CDS
GTTGATGGAGGAATACCTTG+TGG 0.753077 4_3:+17155137 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTCTTTATTGAAATTCT+TGG + chr4_3:17153110-17153129 None:intergenic 20.0%
!!! ATTTCTGTGATTATAGTTTT+CGG + chr4_3:17153192-17153211 None:intergenic 20.0%
!!! AGAATTGGTGTAAATTTTAT+TGG + chr4_3:17155119-17155138 None:intergenic 20.0%
!! TTAATCAAATTGACAACTTA+AGG - chr4_3:17155290-17155309 Msa0632720:CDS 20.0%
! TCTTTAACAATATTTGAGCA+AGG + chr4_3:17152639-17152658 None:intergenic 25.0%
! TGCTCAAATATTGTTAAAGA+AGG - chr4_3:17152639-17152658 Msa0632720:CDS 25.0%
!! TTTTACCACTAGAAAATAAG+TGG - chr4_3:17152679-17152698 Msa0632720:CDS 25.0%
!!! AAAAACCACTTATTTTCTAG+TGG + chr4_3:17152687-17152706 None:intergenic 25.0%
!!! TGGTTTTTTTCATCTGTTAA+GGG - chr4_3:17152699-17152718 Msa0632720:CDS 25.0%
!!! TCTAGTTTTGATGAGAAAAT+GGG + chr4_3:17152780-17152799 None:intergenic 25.0%
!!! TTCTAGTTTTGATGAGAAAA+TGG + chr4_3:17152781-17152800 None:intergenic 25.0%
! CTTTGTCAAAGATAAAGAAA+TGG - chr4_3:17154025-17154044 Msa0632720:CDS 25.0%
!! ACTCTTAAATACCATAGTTT+TGG + chr4_3:17154311-17154330 None:intergenic 25.0%
!!! GTTTTTGACAATTGTCATTT+AGG - chr4_3:17155016-17155035 Msa0632720:CDS 25.0%
! TCAATTAAAGACTCAAGAAT+TGG - chr4_3:17155061-17155080 Msa0632720:CDS 25.0%
! GCTAACATGTTTCATATTTA+TGG - chr4_3:17155223-17155242 Msa0632720:CDS 25.0%
! GTTGTAAATAATGCATCTTT+GGG + chr4_3:17155261-17155280 None:intergenic 25.0%
! TCAATTTGATTAACTGTGAA+AGG + chr4_3:17155283-17155302 None:intergenic 25.0%
TTCAAAGTCTACTTCAACAA+AGG + chr4_3:17152439-17152458 None:intergenic 30.0%
!!! AAGTAGGGTTGAGATTTTTT+GGG + chr4_3:17152488-17152507 None:intergenic 30.0%
!! CAAGTTTTTGATTCCAAGTA+GGG + chr4_3:17152503-17152522 None:intergenic 30.0%
!! ACAAGTTTTTGATTCCAAGT+AGG + chr4_3:17152504-17152523 None:intergenic 30.0%
!!! TCAATAGTTTTGTGATGGTA+AGG + chr4_3:17152549-17152568 None:intergenic 30.0%
!!! AGACTTCAATAGTTTTGTGA+TGG + chr4_3:17152554-17152573 None:intergenic 30.0%
!!! GTGGTTTTTTTCATCTGTTA+AGG - chr4_3:17152698-17152717 Msa0632720:CDS 30.0%
! CTGATGCAATGTAAACTTTT+AGG + chr4_3:17152734-17152753 None:intergenic 30.0%
!!! TACTTCTGTTGTTTCTTTTG+AGG + chr4_3:17152934-17152953 None:intergenic 30.0%
AGATTCTTCAATGGAGTAAT+TGG + chr4_3:17152982-17153001 None:intergenic 30.0%
ATTGTGATTAGATTCTCTTG+TGG + chr4_3:17153134-17153153 None:intergenic 30.0%
TTGTATCTTTCATCATACCT+AGG + chr4_3:17153311-17153330 None:intergenic 30.0%
TGATGAAAGATACAATCTCA+AGG - chr4_3:17153316-17153335 Msa0632720:CDS 30.0%
GATGAAAGATACAATCTCAA+GGG - chr4_3:17153317-17153336 Msa0632720:CDS 30.0%
! AAAATCCTTGGTTGTTGATT+GGG + chr4_3:17153344-17153363 None:intergenic 30.0%
TAAAATCCTTGGTTGTTGAT+TGG + chr4_3:17153345-17153364 None:intergenic 30.0%
TTGTATCTTTCATCATACCT+AGG + chr4_3:17153311-17153330 None:intergenic 30.0%
TGATGAAAGATACAATCTCA+AGG - chr4_3:17153316-17153335 Msa0632720:CDS 30.0%
GATGAAAGATACAATCTCAA+GGG - chr4_3:17153317-17153336 Msa0632720:CDS 30.0%
GATAAAACATCTGTTCAACA+AGG + chr4_3:17153815-17153834 None:intergenic 30.0%
! CTTTGGAAAAAGCAAATACT+TGG + chr4_3:17153977-17153996 None:intergenic 30.0%
!!! TATTTGCTTTTTCCAAAGAC+CGG - chr4_3:17153979-17153998 Msa0632720:CDS 30.0%
GTCAAAGATAAAGAAATGGT+AGG - chr4_3:17154029-17154048 Msa0632720:CDS 30.0%
! TGTTTTCAACATCAGATCAA+AGG - chr4_3:17154274-17154293 Msa0632720:CDS 30.0%
TTTATGTGTCTCCAAAACTA+TGG - chr4_3:17154297-17154316 Msa0632720:CDS 30.0%
!!! ATGAGCAGAAATTTTCAAGT+AGG - chr4_3:17154678-17154697 Msa0632720:intron 30.0%
! AAGTGGATTCATCTAAAACA+TGG + chr4_3:17154736-17154755 None:intergenic 30.0%
TTGATCACTAATGTACAAAG+TGG + chr4_3:17154753-17154772 None:intergenic 30.0%
TTGCTAAATATGGTCAGAAA+TGG - chr4_3:17154897-17154916 Msa0632720:CDS 30.0%
TCTTTAATTGAACTTCCACT+GGG + chr4_3:17155052-17155071 None:intergenic 30.0%
TAAAGACTCAAGAATTGGAA+AGG - chr4_3:17155066-17155085 Msa0632720:CDS 30.0%
AACAAGAAGTGGATAAGAAT+TGG + chr4_3:17155134-17155153 None:intergenic 30.0%
CAACATGGAGTTAAGAAAAT+GGG - chr4_3:17155160-17155179 Msa0632720:CDS 30.0%
GGTTGTAAATAATGCATCTT+TGG + chr4_3:17155262-17155281 None:intergenic 30.0%
TTGCAACAATATTCATTGCT+TGG + chr4_3:17155318-17155337 None:intergenic 30.0%
CAATGAATATTGTTGCAATG+AGG - chr4_3:17155320-17155339 Msa0632720:CDS 30.0%
!! TGGATGTTGATTCCAATATA+TGG - chr4_3:17155392-17155411 Msa0632720:CDS 30.0%
! TCCTCTTTTTGATACTGATA+TGG - chr4_3:17155542-17155561 Msa0632720:CDS 30.0%
ACCATATCAGTATCAAAAAG+AGG + chr4_3:17155546-17155565 None:intergenic 30.0%
AACATGTAGAGAAAACAAGT+CGG + chr4_3:17155586-17155605 None:intergenic 30.0%
TTTCTCTACATGTTCTTGAT+TGG - chr4_3:17155592-17155611 Msa0632720:CDS 30.0%
! ATTTGAGACATCCAAAGTTT+AGG - chr4_3:17155959-17155978 Msa0632720:CDS 30.0%
CATGATCTTATGCCAAAAGA+TGG - chr4_3:17152396-17152415 Msa0632720:CDS 35.0%
CAGTTCTTGTTCTGCTTAAT+TGG + chr4_3:17152464-17152483 None:intergenic 35.0%
!!! CAAGTAGGGTTGAGATTTTT+TGG + chr4_3:17152489-17152508 None:intergenic 35.0%
CAAAAAATCTCAACCCTACT+TGG - chr4_3:17152487-17152506 Msa0632720:CDS 35.0%
!! AGTTTTGTGATGGTAAGGTT+TGG + chr4_3:17152544-17152563 None:intergenic 35.0%
! GGGAGAAAAATCTTTAGCTT+TGG + chr4_3:17152760-17152779 None:intergenic 35.0%
! TCTAATGTTTCTGTGGTTGA+GGG + chr4_3:17152876-17152895 None:intergenic 35.0%
! TTCTAATGTTTCTGTGGTTG+AGG + chr4_3:17152877-17152896 None:intergenic 35.0%
! ATCAGCTTCTAATGTTTCTG+TGG + chr4_3:17152883-17152902 None:intergenic 35.0%
ACTAGACTGAGATTCTTCAA+TGG + chr4_3:17152991-17153010 None:intergenic 35.0%
TGAGAAGATATCTGTTCAAC+AGG + chr4_3:17153056-17153075 None:intergenic 35.0%
! TGTGATTATAGTTTTCGGCA+CGG + chr4_3:17153187-17153206 None:intergenic 35.0%
TTAACTGAGTATGTCGTTGA+TGG + chr4_3:17153275-17153294 None:intergenic 35.0%
ATCTTTCATCATACCTAGGA+TGG + chr4_3:17153307-17153326 None:intergenic 35.0%
! ACTGAGTATGTTGTTGATGA+AGG + chr4_3:17153428-17153447 None:intergenic 35.0%
ATCTTTCATCATACCTAGGA+TGG + chr4_3:17153307-17153326 None:intergenic 35.0%
TAAAATCCTTGGTTGTTGGT+TGG + chr4_3:17153501-17153520 None:intergenic 35.0%
CTACTAAAATCCTTGGTTGT+TGG + chr4_3:17153349-17153368 None:intergenic 35.0%
GAAACTACTAATCCACAGAT+TGG - chr4_3:17153611-17153630 Msa0632720:CDS 35.0%
! GAGCTTATGATGGAAGAAAA+TGG - chr4_3:17153654-17153673 Msa0632720:CDS 35.0%
AGAAGAAATTGAATCCAGAG+TGG - chr4_3:17153949-17153968 Msa0632720:CDS 35.0%
CAAGAACTGAAGATTGAATC+CGG + chr4_3:17154001-17154020 None:intergenic 35.0%
GTAGGAAGAGATGATTATCT+AGG - chr4_3:17154047-17154066 Msa0632720:CDS 35.0%
! AAATCTTGGTCTTCAGTACT+TGG + chr4_3:17154415-17154434 None:intergenic 35.0%
TGTTCTAGTGGAACAAATCT+TGG + chr4_3:17154429-17154448 None:intergenic 35.0%
!! TCCACTTTGGAATGAAGATT+TGG - chr4_3:17154454-17154473 Msa0632720:CDS 35.0%
ACCAAATCTTCATTCCAAAG+TGG + chr4_3:17154458-17154477 None:intergenic 35.0%
! CTTCAAAAGATGAGGTACTT+GGG - chr4_3:17154540-17154559 Msa0632720:CDS 35.0%
CTCTTCTCAAAAAGGTTCAA+AGG + chr4_3:17154578-17154597 None:intergenic 35.0%
!! TGGTTTAGCCTTGAGAAATT+TGG - chr4_3:17154626-17154645 Msa0632720:intron 35.0%
!! AGCCTTGAGAAATTTGGTTT+TGG - chr4_3:17154632-17154651 Msa0632720:intron 35.0%
CACCAAAACCAAATTTCTCA+AGG + chr4_3:17154637-17154656 None:intergenic 35.0%
CCTATTGGAATACTTGAGAT+GGG - chr4_3:17154803-17154822 Msa0632720:CDS 35.0%
! GCATACTGTGTTGCTAAATA+TGG - chr4_3:17154887-17154906 Msa0632720:CDS 35.0%
!! GAAAGTGTCTAAAAGTGTTC+TGG + chr4_3:17154930-17154949 None:intergenic 35.0%
GTGTATTGCTCATTCCATTT+GGG + chr4_3:17154956-17154975 None:intergenic 35.0%
TGTGTATTGCTCATTCCATT+TGG + chr4_3:17154957-17154976 None:intergenic 35.0%
AATGGAATGAGCAATACACA+TGG - chr4_3:17154957-17154976 Msa0632720:CDS 35.0%
ATGGAATGAGCAATACACAT+GGG - chr4_3:17154958-17154977 Msa0632720:CDS 35.0%
GTCTTTAATTGAACTTCCAC+TGG + chr4_3:17155053-17155072 None:intergenic 35.0%
ACTCAAGAATTGGAAAGGTA+AGG - chr4_3:17155071-17155090 Msa0632720:CDS 35.0%
GAATTGGAAAGGTAAGGATT+AGG - chr4_3:17155077-17155096 Msa0632720:CDS 35.0%
TGTTGGTGTAAAACAAGAAG+TGG + chr4_3:17155145-17155164 None:intergenic 35.0%
!!! CTTCTTGTTTTACACCAACA+TGG - chr4_3:17155145-17155164 Msa0632720:CDS 35.0%
! CCATTTTCTTAACTCCATGT+TGG + chr4_3:17155162-17155181 None:intergenic 35.0%
CCAACATGGAGTTAAGAAAA+TGG - chr4_3:17155159-17155178 Msa0632720:CDS 35.0%
! TAATGCATCTTTGGGAGTAA+AGG + chr4_3:17155253-17155272 None:intergenic 35.0%
AATATTGTTGCAATGAGGCT+TGG - chr4_3:17155325-17155344 Msa0632720:CDS 35.0%
TCTTCTCATGCTCCATATAT+TGG + chr4_3:17155407-17155426 None:intergenic 35.0%
TGTAATCAAACCGGAGAAAA+GGG + chr4_3:17155458-17155477 None:intergenic 35.0%
TTGTAATCAAACCGGAGAAA+AGG + chr4_3:17155459-17155478 None:intergenic 35.0%
! TTCTCCGGTTTGATTACAAT+CGG - chr4_3:17155460-17155479 Msa0632720:CDS 35.0%
TCTTCCGATTGTAATCAAAC+CGG + chr4_3:17155467-17155486 None:intergenic 35.0%
GTTTGATTACAATCGGAAGA+TGG - chr4_3:17155467-17155486 Msa0632720:CDS 35.0%
!! ACATGTTCTTGATTGGCTTA+TGG - chr4_3:17155599-17155618 Msa0632720:CDS 35.0%
!! TGATTGGCTTATGGAACTAT+CGG - chr4_3:17155608-17155627 Msa0632720:CDS 35.0%
ACATGGATACTAAACTCTCA+TGG - chr4_3:17155653-17155672 Msa0632720:CDS 35.0%
CATGGATACTAAACTCTCAT+GGG - chr4_3:17155654-17155673 Msa0632720:CDS 35.0%
GGTAGGATTCAAACAATTGT+TGG - chr4_3:17155784-17155803 Msa0632720:CDS 35.0%
!! ACCATTTAGAGTTGTGGTTT+TGG - chr4_3:17155921-17155940 Msa0632720:CDS 35.0%
ACCAAAACCACAACTCTAAA+TGG + chr4_3:17155925-17155944 None:intergenic 35.0%
!! GGTAGTTTGTTCCTAAACTT+TGG + chr4_3:17155973-17155992 None:intergenic 35.0%
AAGAAATTACTCGGAACAGA+AGG + chr4_3:17155994-17156013 None:intergenic 35.0%
TTCCGAGTAATTTCTTCAAG+AGG - chr4_3:17155998-17156017 Msa0632720:CDS 35.0%
AGCCTCTTGAAGAAATTACT+CGG + chr4_3:17156003-17156022 None:intergenic 35.0%
GTAAACTATCTGTTCTAGCA+GGG + chr4_3:17156026-17156045 None:intergenic 35.0%
AGTAAACTATCTGTTCTAGC+AGG + chr4_3:17156027-17156046 None:intergenic 35.0%
CTTATGCCAAAAGATGGTGA+AGG - chr4_3:17152402-17152421 Msa0632720:CDS 40.0%
TTGTCTCCTATCGTTGTAGA+CGG + chr4_3:17152577-17152596 None:intergenic 40.0%
TCATCTGTTAAGGGTGAGAT+TGG - chr4_3:17152708-17152727 Msa0632720:CDS 40.0%
! GGTTCTTGTTTAGGAGTAGA+AGG + chr4_3:17152813-17152832 None:intergenic 40.0%
!! GTGGATTCTGGTTCTTGTTT+AGG + chr4_3:17152822-17152841 None:intergenic 40.0%
! AGGTTAGTATCAGTGGATTC+TGG + chr4_3:17152834-17152853 None:intergenic 40.0%
GGTTCTTCGATCTCTATCTT+TGG + chr4_3:17153035-17153054 None:intergenic 40.0%
CGTCTCTTGATTGAAATCCT+TGG + chr4_3:17153230-17153249 None:intergenic 40.0%
TTAATCCACAAGTCCATCCT+AGG - chr4_3:17153291-17153310 Msa0632720:CDS 40.0%
GGTGTCTCTACTAAAATCCT+TGG + chr4_3:17153356-17153375 None:intergenic 40.0%
!! GGATTTTAGTAGAGACACCT+CGG - chr4_3:17153357-17153376 Msa0632720:CDS 40.0%
TTAATCCACAAGTCCATCCT+AGG - chr4_3:17153291-17153310 Msa0632720:CDS 40.0%
GGTGTCTCTACTAAAATCCT+TGG + chr4_3:17153356-17153375 None:intergenic 40.0%
! AGTTTTCGTCATTGCTAGTG+TGG + chr4_3:17153580-17153599 None:intergenic 40.0%
ATCCACAGATTGGTGAAAAG+TGG - chr4_3:17153621-17153640 Msa0632720:CDS 40.0%
AAAGCAAAGGATCTTACTCC+AGG - chr4_3:17153852-17153871 Msa0632720:CDS 40.0%
TTCAAGCTGTGATCCTTATG+TGG - chr4_3:17153884-17153903 Msa0632720:CDS 40.0%
CTTATGTGGAAGTGAAGCTA+GGG - chr4_3:17153898-17153917 Msa0632720:CDS 40.0%
TGAAGATTGAATCCGGTCTT+TGG + chr4_3:17153994-17154013 None:intergenic 40.0%
ATTATGCTCGCAGTTTGGAT+GGG - chr4_3:17154185-17154204 Msa0632720:CDS 40.0%
ATGAAGCTTTCTCAGATGCT+TGG - chr4_3:17154219-17154238 Msa0632720:CDS 40.0%
GTTTCTGTCAAGGCTCAATT+AGG - chr4_3:17154386-17154405 Msa0632720:CDS 40.0%
AAGTGGAGTAGTTGTTCTAG+TGG + chr4_3:17154441-17154460 None:intergenic 40.0%
CTAGAACAACTACTCCACTT+TGG - chr4_3:17154441-17154460 Msa0632720:CDS 40.0%
ATTGTCAACTGCTCCTCAAA+TGG + chr4_3:17154497-17154516 None:intergenic 40.0%
TGTGCAACCTTCAAAAGATG+AGG - chr4_3:17154532-17154551 Msa0632720:CDS 40.0%
! CCAAGTACCTCATCTTTTGA+AGG + chr4_3:17154542-17154561 None:intergenic 40.0%
! CCTTCAAAAGATGAGGTACT+TGG - chr4_3:17154539-17154558 Msa0632720:CDS 40.0%
GGTCTAGTCTCTTCTCAAAA+AGG + chr4_3:17154586-17154605 None:intergenic 40.0%
CTAAACCAACGAGAATGAAC+CGG + chr4_3:17154614-17154633 None:intergenic 40.0%
CATCTTAGAGTTTGCCTTGA+AGG - chr4_3:17154704-17154723 Msa0632720:intron 40.0%
AAACATGGTATCCACCTTCA+AGG + chr4_3:17154721-17154740 None:intergenic 40.0%
GCCTATTGGAATACTTGAGA+TGG - chr4_3:17154802-17154821 Msa0632720:CDS 40.0%
CCCATCTCAAGTATTCCAAT+AGG + chr4_3:17154806-17154825 None:intergenic 40.0%
ATACTTGAGATGGGCATCTT+AGG - chr4_3:17154812-17154831 Msa0632720:CDS 40.0%
GACCATCCTTCATCTTCATA+GGG + chr4_3:17154853-17154872 None:intergenic 40.0%
TGACCATCCTTCATCTTCAT+AGG + chr4_3:17154854-17154873 None:intergenic 40.0%
ATGAAGATGAAGGATGGTCA+TGG - chr4_3:17154854-17154873 Msa0632720:CDS 40.0%
TAGACACTTTCAGTCCCAAA+TGG - chr4_3:17154939-17154958 Msa0632720:CDS 40.0%
GGTTCAATGACGTTTGTCAT+TGG - chr4_3:17155488-17155507 Msa0632720:CDS 40.0%
CAAGTCGGTAGTATAAGTTC+TGG + chr4_3:17155571-17155590 None:intergenic 40.0%
AGTTTAGTATCCATGTGAGG+CGG + chr4_3:17155649-17155668 None:intergenic 40.0%
GAGAGTTTAGTATCCATGTG+AGG + chr4_3:17155652-17155671 None:intergenic 40.0%
AACTCTTCGTCAAGTTCATC+AGG + chr4_3:17155694-17155713 None:intergenic 40.0%
GCATCATGTGATCTTGATGT+TGG + chr4_3:17155727-17155746 None:intergenic 40.0%
TGTTTGAATCCTACCTGCAA+CGG + chr4_3:17155779-17155798 None:intergenic 40.0%
CAAACAGTGTAGTTCCTCTA+GGG + chr4_3:17155861-17155880 None:intergenic 40.0%
ACAAACAGTGTAGTTCCTCT+AGG + chr4_3:17155862-17155881 None:intergenic 40.0%
AGAAAATCACAGCTGCACAA+AGG + chr4_3:17155894-17155913 None:intergenic 40.0%
! TGCAACACCATTTAGAGTTG+TGG - chr4_3:17155915-17155934 Msa0632720:CDS 40.0%
! GCTGATCCTTCACCATCTTT+TGG + chr4_3:17152411-17152430 None:intergenic 45.0%
AAGTCTCCGTCTACAACGAT+AGG - chr4_3:17152568-17152587 Msa0632720:CDS 45.0%
TTACCCTTCCGAGGAAGTTT+CGG + chr4_3:17152611-17152630 None:intergenic 45.0%
AAGGAATTCTTACCCTTCCG+AGG + chr4_3:17152620-17152639 None:intergenic 45.0%
AGGAGGAAGGTTAGTATCAG+TGG + chr4_3:17152841-17152860 None:intergenic 45.0%
GAAGCTGATCCTAACGAAGA+AGG - chr4_3:17152894-17152913 Msa0632720:CDS 45.0%
AGTGCAGAACCTTCTTCGTT+AGG + chr4_3:17152906-17152925 None:intergenic 45.0%
TGAAATCCTTGGCTGCATGT+TGG + chr4_3:17153219-17153238 None:intergenic 45.0%
! GTTGATGGAGGAATACCTTG+TGG + chr4_3:17153260-17153279 None:intergenic 45.0%
! ACTGAGTATGTCGTTGATGG+AGG + chr4_3:17153272-17153291 None:intergenic 45.0%
! TCATACCTAGGATGGACTTG+TGG + chr4_3:17153299-17153318 None:intergenic 45.0%
GAATCTTCACAATGCCTTGG+GGG + chr4_3:17153395-17153414 None:intergenic 45.0%
CGAATCTTCACAATGCCTTG+GGG + chr4_3:17153396-17153415 None:intergenic 45.0%
GCGAATCTTCACAATGCCTT+GGG + chr4_3:17153397-17153416 None:intergenic 45.0%
TGCGAATCTTCACAATGCCT+TGG + chr4_3:17153398-17153417 None:intergenic 45.0%
! AGGCATTGTGAAGATTCGCA+AGG - chr4_3:17153398-17153417 Msa0632720:CDS 45.0%
! TCATACCTAGGATGGACTTG+TGG + chr4_3:17153299-17153318 None:intergenic 45.0%
! GACATGTTGCTTCATCTCCA+AGG - chr4_3:17153534-17153553 Msa0632720:CDS 45.0%
TCATTGCTAGTGTGGACTTG+CGG + chr4_3:17153572-17153591 None:intergenic 45.0%
TGACGAAAACTACAGTGTCG+AGG - chr4_3:17153589-17153608 Msa0632720:CDS 45.0%
GGAAGAAAATGGACGAGTAG+TGG - chr4_3:17153665-17153684 Msa0632720:CDS 45.0%
TGTTCGCGTAGTGAAAGCAA+AGG - chr4_3:17153839-17153858 Msa0632720:CDS 45.0%
CAGCTTGAAGTGATTGTTCC+TGG + chr4_3:17153873-17153892 None:intergenic 45.0%
CCTAGCTTCACTTCCACATA+AGG + chr4_3:17153900-17153919 None:intergenic 45.0%
CCTTATGTGGAAGTGAAGCT+AGG - chr4_3:17153897-17153916 Msa0632720:CDS 45.0%
GTGAAGCTAGGGAACTATAG+AGG - chr4_3:17153909-17153928 Msa0632720:CDS 45.0%
GCAAATACTTGGTTCCACTC+TGG + chr4_3:17153966-17153985 None:intergenic 45.0%
CTCTTGTTGGAATCTCATCG+AGG + chr4_3:17154088-17154107 None:intergenic 45.0%
CTATCTGGTGGAACTCTTGT+TGG + chr4_3:17154101-17154120 None:intergenic 45.0%
TGTTGGAGTCTGTACCATTG+AGG + chr4_3:17154134-17154153 None:intergenic 45.0%
CATTATGCTCGCAGTTTGGA+TGG - chr4_3:17154184-17154203 Msa0632720:CDS 45.0%
TCTGATGCTGCTACTGTCTA+CGG - chr4_3:17154245-17154264 Msa0632720:CDS 45.0%
TGTAGCAGCTGAACCATTTG+AGG - chr4_3:17154481-17154500 Msa0632720:CDS 45.0%
GGAGCAGTTGACAATAACTG+TGG - chr4_3:17154502-17154521 Msa0632720:CDS 45.0%
GCAGTTGACAATAACTGTGG+AGG - chr4_3:17154505-17154524 Msa0632720:CDS 45.0%
! CAAAAGATGAGGTACTTGGG+AGG - chr4_3:17154543-17154562 Msa0632720:CDS 45.0%
!!! TTTGGTTTTGGTGCGCTAGA+AGG - chr4_3:17154644-17154663 Msa0632720:intron 45.0%
CTTAGAGTTTGCCTTGAAGG+TGG - chr4_3:17154707-17154726 Msa0632720:intron 45.0%
! TTCCATAGCTGTCTTGCTGT+TGG + chr4_3:17154779-17154798 None:intergenic 45.0%
ATGGGCATCTTAGGAGCAAA+AGG - chr4_3:17154821-17154840 Msa0632720:CDS 45.0%
TGGGCATCTTAGGAGCAAAA+GGG - chr4_3:17154822-17154841 Msa0632720:CDS 45.0%
GCTTCTCCCTATGAAGATGA+AGG - chr4_3:17154844-17154863 Msa0632720:CDS 45.0%
CTCCCTATGAAGATGAAGGA+TGG - chr4_3:17154848-17154867 Msa0632720:CDS 45.0%
GAATGAGCAATACACATGGG+AGG - chr4_3:17154961-17154980 Msa0632720:CDS 45.0%
CCTAGTGTTATGACAGTGCA+AGG + chr4_3:17154995-17155014 None:intergenic 45.0%
CCTTGCACTGTCATAACACT+AGG - chr4_3:17154992-17155011 Msa0632720:CDS 45.0%
TTAGGTGAAAAAGCTCCCAG+TGG - chr4_3:17155034-17155053 Msa0632720:CDS 45.0%
! GCATCTTTGGGAGTAAAGGT+TGG + chr4_3:17155249-17155268 None:intergenic 45.0%
TCAACAACTTCCTTCCTGAG+TGG + chr4_3:17155364-17155383 None:intergenic 45.0%
GGAAGTTGTTGAGTACATGC+TGG - chr4_3:17155372-17155391 Msa0632720:CDS 45.0%
CACATGATGCAGTGAGAATG+AGG - chr4_3:17155737-17155756 Msa0632720:CDS 45.0%
GATAGACTTAGAACCGTTGC+AGG - chr4_3:17155763-17155782 Msa0632720:CDS 45.0%
TTGGCGACATAGCTACACAA+GGG - chr4_3:17155803-17155822 Msa0632720:CDS 45.0%
GGTTTATGTCTCTACTGAGC+TGG - chr4_3:17155830-17155849 Msa0632720:CDS 45.0%
!!! AGAGTTGTGGTTTTGGTGAC+AGG - chr4_3:17155928-17155947 Msa0632720:CDS 45.0%
ACTAACCTTCCTCCTCTCCA+CGG - chr4_3:17152846-17152865 Msa0632720:CDS 50.0%
GCACGGCTAGATTGAAGTTG+AGG + chr4_3:17153170-17153189 None:intergenic 50.0%
ATGACTCCAACATGCAGCCA+AGG - chr4_3:17153210-17153229 Msa0632720:CDS 50.0%
AGGGACCCAATCAACAACCA+AGG - chr4_3:17153336-17153355 Msa0632720:CDS 50.0%
AGGGAACCAACCAACAACCA+AGG - chr4_3:17153492-17153511 Msa0632720:CDS 50.0%
GGAGATGAAGCAACATGTCG+AGG + chr4_3:17153533-17153552 None:intergenic 50.0%
GTTGCTTCATCTCCAAGGCA+CGG - chr4_3:17153539-17153558 Msa0632720:CDS 50.0%
!!! GGCCACTTTTCACCAATCTG+TGG + chr4_3:17153626-17153645 None:intergenic 50.0%
ATTGGTGAAAAGTGGCCCAG+TGG - chr4_3:17153629-17153648 Msa0632720:CDS 50.0%
CCATCATAAGCTCCACCACT+GGG + chr4_3:17153647-17153666 None:intergenic 50.0%
TCCATCATAAGCTCCACCAC+TGG + chr4_3:17153648-17153667 None:intergenic 50.0%
AGTTCCACCAGATAGTCCAC+TGG - chr4_3:17154106-17154125 Msa0632720:CDS 50.0%
!! ATAGTCCACTGGCTCCTCAA+TGG - chr4_3:17154117-17154136 Msa0632720:CDS 50.0%
TACAGACTCCAACACTTGCG+AGG - chr4_3:17154140-17154159 Msa0632720:CDS 50.0%
GCGACATTATGCTCGCAGTT+TGG - chr4_3:17154180-17154199 Msa0632720:CDS 50.0%
GTAAGCGGTTTCTGTCACTC+GGG + chr4_3:17154361-17154380 None:intergenic 50.0%
GGTAAGCGGTTTCTGTCACT+CGG + chr4_3:17154362-17154381 None:intergenic 50.0%
GAGTGACAGAAACCGCTTAC+CGG - chr4_3:17154361-17154380 Msa0632720:CDS 50.0%
TGACAGAAACCTCCGGTAAG+CGG + chr4_3:17154376-17154395 None:intergenic 50.0%
CTTACCGGAGGTTTCTGTCA+AGG - chr4_3:17154376-17154395 Msa0632720:CDS 50.0%
TGAGCCTTGACAGAAACCTC+CGG + chr4_3:17154383-17154402 None:intergenic 50.0%
GAAGAGACTAGACCACAGAC+CGG - chr4_3:17154592-17154611 Msa0632720:intron 50.0%
AACGAGAATGAACCGGTCTG+TGG + chr4_3:17154607-17154626 None:intergenic 50.0%
! ACAGACCGGTTCATTCTCGT+TGG - chr4_3:17154606-17154625 Msa0632720:intron 50.0%
GACCAACAGCAAGACAGCTA+TGG - chr4_3:17154774-17154793 Msa0632720:CDS 50.0%
CAGCTATGGAAGCAGCCTAT+TGG - chr4_3:17154788-17154807 Msa0632720:CDS 50.0%
GTGAGCTTCAACTCACAGTG+AGG - chr4_3:17155182-17155201 Msa0632720:CDS 50.0%
ACAACTTCCTTCCTGAGTGG+CGG + chr4_3:17155361-17155380 None:intergenic 50.0%
! CGTGTGATGTCCCTTTTCTC+CGG - chr4_3:17155445-17155464 Msa0632720:CDS 50.0%
GACTTAGAACCGTTGCAGGT+AGG - chr4_3:17155767-17155786 Msa0632720:CDS 50.0%
GTTGGCGACATAGCTACACA+AGG - chr4_3:17155802-17155821 Msa0632720:CDS 50.0%
TGGCGACATAGCTACACAAG+GGG - chr4_3:17155804-17155823 Msa0632720:CDS 50.0%
ACATAGCTACACAAGGGGAG+AGG - chr4_3:17155809-17155828 Msa0632720:CDS 50.0%
GATAGGAGACAACCGATCCC+TGG - chr4_3:17152585-17152604 Msa0632720:CDS 55.0%
AGGAAGTTTCGGCCAGGGAT+CGG + chr4_3:17152600-17152619 None:intergenic 55.0%
ATCCCTGGCCGAAACTTCCT+CGG - chr4_3:17152600-17152619 Msa0632720:CDS 55.0%
TTCCGAGGAAGTTTCGGCCA+GGG + chr4_3:17152605-17152624 None:intergenic 55.0%
TGGCCGAAACTTCCTCGGAA+GGG - chr4_3:17152605-17152624 Msa0632720:CDS 55.0%
GGAGGAATACCTTGTGGTCG+CGG + chr4_3:17153254-17153273 None:intergenic 55.0%
GGCATGTTTCTTCACCCCCA+AGG - chr4_3:17153378-17153397 Msa0632720:CDS 55.0%
! CCCAGTGGTGGAGCTTATGA+TGG - chr4_3:17153644-17153663 Msa0632720:CDS 55.0%
!! TGAGGAGCCAGTGGACTATC+TGG + chr4_3:17154116-17154135 None:intergenic 55.0%
CTGTACCATTGAGGAGCCAG+TGG + chr4_3:17154125-17154144 None:intergenic 55.0%
TACCTTCGCCTCGCAAGTGT+TGG + chr4_3:17154151-17154170 None:intergenic 55.0%
ACACTTGCGAGGCGAAGGTA+TGG - chr4_3:17154151-17154170 Msa0632720:CDS 55.0%
GCTGCTACTGTCTACGGTGA+AGG - chr4_3:17154251-17154270 Msa0632720:CDS 55.0%
TGACAGAAACCGCTTACCGG+AGG - chr4_3:17154364-17154383 Msa0632720:CDS 55.0%
TCCATGTGAGGCGGTTGTCT+CGG + chr4_3:17155640-17155659 None:intergenic 55.0%
CTTCCGAGGAAGTTTCGGCC+AGG + chr4_3:17152606-17152625 None:intergenic 60.0%
CTGGCCGAAACTTCCTCGGA+AGG - chr4_3:17152604-17152623 Msa0632720:CDS 60.0%
! GAGTACCGTGGAGAGGAGGA+AGG + chr4_3:17152854-17152873 None:intergenic 60.0%
!! GTTGAGGGAGTACCGTGGAG+AGG + chr4_3:17152861-17152880 None:intergenic 60.0%
!! CTGTGGTTGAGGGAGTACCG+TGG + chr4_3:17152866-17152885 None:intergenic 60.0%
AAGAGACGACCGCGACCACA+AGG - chr4_3:17153242-17153261 Msa0632720:CDS 60.0%
GGGGGTGAAGAAACATGCCG+AGG + chr4_3:17153377-17153396 None:intergenic 60.0%
TGCGGATCAACACCGTGCCT+TGG + chr4_3:17153554-17153573 None:intergenic 60.0%
GGTGAAAAGTGGCCCAGTGG+TGG - chr4_3:17153632-17153651 Msa0632720:CDS 60.0%
!! GGAGCCAGTGGACTATCTGG+TGG + chr4_3:17154113-17154132 None:intergenic 60.0%
CTCCAACACTTGCGAGGCGA+AGG - chr4_3:17154146-17154165 Msa0632720:CDS 60.0%
! CGAGGCGAAGGTATGGTGAG+AGG - chr4_3:17154158-17154177 Msa0632720:CDS 60.0%
GTAGAGCTGAACCGCCACTC+AGG - chr4_3:17155347-17155366 Msa0632720:CDS 60.0%
AGCTGAACCGCCACTCAGGA+AGG - chr4_3:17155351-17155370 Msa0632720:CDS 60.0%
TCCGAGACAACCGCCTCACA+TGG - chr4_3:17155636-17155655 Msa0632720:CDS 60.0%
CTGAGCTGGAGAGACCCTAG+AGG - chr4_3:17155844-17155863 Msa0632720:CDS 60.0%
!! GAGGGAGTACCGTGGAGAGG+AGG + chr4_3:17152858-17152877 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 17152366 17156050 17152366 ID=Msa0632720;Name=Msa0632720
chr4_3 mRNA 17152366 17156050 17152366 ID=Msa0632720-mRNA-1;Parent=Msa0632720;Name=Msa0632720-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|1178
chr4_3 exon 17154715 17156050 17154715 ID=Msa0632720-mRNA-1:exon:4797;Parent=Msa0632720-mRNA-1
chr4_3 exon 17152366 17154566 17152366 ID=Msa0632720-mRNA-1:exon:4796;Parent=Msa0632720-mRNA-1
chr4_3 CDS 17154715 17156050 17154715 ID=Msa0632720-mRNA-1:cds;Parent=Msa0632720-mRNA-1
chr4_3 CDS 17152366 17154566 17152366 ID=Msa0632720-mRNA-1:cds;Parent=Msa0632720-mRNA-1
Gene Sequence

>Msa0632720

ATGAAACTGATAGTAGAGGTTATTAATGCTCATGATCTTATGCCAAAAGATGGTGAAGGATCAGCTAGTACCTTTGTTGAAGTAGACTTTGAAAACCAATTAAGCAGAACAAGAACTGTCCCAAAAAATCTCAACCCTACTTGGAATCAAAAACTTGTCTTTAATTTAGATACAACCAAACCTTACCATCACAAAACTATTGAAGTCTCCGTCTACAACGATAGGAGACAACCGATCCCTGGCCGAAACTTCCTCGGAAGGGTAAGAATTCCTTGCTCAAATATTGTTAAAGAAGGTGATGAAGTGTATCAGATTTTACCACTAGAAAATAAGTGGTTTTTTTCATCTGTTAAGGGTGAGATTGGCCTAAAAGTTTACATTGCATCAGAGTCCAAAGCTAAAGATTTTTCTCCCATTTTCTCATCAAAACTAGAAAAACTCTCACCTTCTACTCCTAAACAAGAACCAGAATCCACTGATACTAACCTTCCTCCTCTCCACGGTACTCCCTCAACCACAGAAACATTAGAAGCTGATCCTAACGAAGAAGGTTCTGCACTTGATGCCTCAAAAGAAACAACAGAAGTAGAAAAAGTATATTCTGTTGCTGCATCCAATTACTCCATTGAAGAATCTCAGTCTAGTAGCATTGATATTGATCAAGAGCCAAAGATAGAGATCGAAGAACCTGTTGAACAGATATCTTCTCAAAAACTAGACAAACATCAAGTTCATCAGCAACCAAGAATTTCAATAAAGAAAAGACCACAAGAGAATCTAATCACAATGCACTCAGTTGATCCTCAACTTCAATCTAGCCGTGCCGAAAACTATAATCACAGAAATGACTCCAACATGCAGCCAAGGATTTCAATCAAGAGACGACCGCGACCACAAGGTATTCCTCCATCAACGACATACTCAGTTAATCCACAAGTCCATCCTAGGTATGATGAAAGATACAATCTCAAGGGACCCAATCAACAACCAAGGATTTTAGTAGAGACACCTCGGCATGTTTCTTCACCCCCAAGGCATTGTGAAGATTCGCAAGGTATACCTTCATCAACAACATACTCAGTTAATCCACAAGTCCATCCTAGGTATGATGAAAGATACAATCTCAAGGGAACCAACCAACAACCAAGGATTTTAGTAGAGACACCTCGACATGTTGCTTCATCTCCAAGGCACGGTGTTGATCCGCAAGTCCACACTAGCAATGACGAAAACTACAGTGTCGAGGAAACTACTAATCCACAGATTGGTGAAAAGTGGCCCAGTGGTGGAGCTTATGATGGAAGAAAATGGACGAGTAGTGGTGAAAGACTCACCATGAAAGCAAAGGATCTTACTCCAGGAACAATCACTTCAAGCTGTGATCCTTATGTGGAAGTGAAGCTAGGGAACTATAGAGGAAGAACAAAGCATTTTGAGAAGAAATTGAATCCAGAGTGGAACCAAGTATTTGCTTTTTCCAAAGACCGGATTCAATCTTCAGTTCTTGAAGTCTTTGTCAAAGATAAAGAAATGGTAGGAAGAGATGATTATCTAGGAAGAGTGATCTTCGACCTCGATGAGATTCCAACAAGAGTTCCACCAGATAGTCCACTGGCTCCTCAATGGTACAGACTCCAACACTTGCGAGGCGAAGGTATGGTGAGAGGCGACATTATGCTCGCAGTTTGGATGGGAACACAAGCTGATGAAGCTTTCTCAGATGCTTGGCATTCTGATGCTGCTACTGTCTACGGTGAAGGTGTTTTCAACATCAGATCAAAGGTTTATGTGTCTCCAAAACTATGGTATTTAAGAGTCAATGTTATTGAAGCACAAGATGTCATCCCGAGTGACAGAAACCGCTTACCGGAGGTTTCTGTCAAGGCTCAATTAGGCTGCCAAGTACTGAAGACCAAGATTTGTTCCACTAGAACAACTACTCCACTTTGGAATGAAGATTTGGTTTTTGTAGCAGCTGAACCATTTGAGGAGCAGTTGACAATAACTGTGGAGGATCATGTGCAACCTTCAAAAGATGAGGTACTTGGGAGGATAAGCTTACCTTTGAACCTTTTTGAGAAGAGACTAGACCACAGACCGGTTCATTCTCGTTGGTTTAGCCTTGAGAAATTTGGTTTTGGTGCGCTAGAAGGTGATAGAAGAAATGAGCAGAAATTTTCAAGTAGGATTCATCTTAGAGTTTGCCTTGAAGGTGGATACCATGTTTTAGATGAATCCACTTTGTACATTAGTGATCAAAGACCAACAGCAAGACAGCTATGGAAGCAGCCTATTGGAATACTTGAGATGGGCATCTTAGGAGCAAAAGGGCTTCTCCCTATGAAGATGAAGGATGGTCATGGTAGCACAGATGCATACTGTGTTGCTAAATATGGTCAGAAATGGATCAGAACCAGAACACTTTTAGACACTTTCAGTCCCAAATGGAATGAGCAATACACATGGGAGGTTTATGATCCTTGCACTGTCATAACACTAGGTGTTTTTGACAATTGTCATTTAGGTGAAAAAGCTCCCAGTGGAAGTTCAATTAAAGACTCAAGAATTGGAAAGGTAAGGATTAGGCTATCAACACTTGAAGCCAATAAAATTTACACCAATTCTTATCCACTTCTTGTTTTACACCAACATGGAGTTAAGAAAATGGGTGAGCTTCAACTCACAGTGAGGTTCACTGCACTCTCACTAGCTAACATGTTTCATATTTATGGCCAACCTTTACTCCCAAAGATGCATTATTTACAACCTTTCACAGTTAATCAAATTGACAACTTAAGGTACCAAGCAATGAATATTGTTGCAATGAGGCTTGGTAGAGCTGAACCGCCACTCAGGAAGGAAGTTGTTGAGTACATGCTGGATGTTGATTCCAATATATGGAGCATGAGAAGAAGCAAAGCTAACTTCTTTCGTGTGATGTCCCTTTTCTCCGGTTTGATTACAATCGGAAGATGGTTCAATGACGTTTGTCATTGGAAGAATCACATTACATCAATACTAGTTCACATCCTCTTTTTGATACTGATATGGTATCCAGAACTTATACTACCGACTTGTTTTCTCTACATGTTCTTGATTGGCTTATGGAACTATCGGTTTCGTCCGAGACAACCGCCTCACATGGATACTAAACTCTCATGGGCAGAGTCTGTTCATCCTGATGAACTTGACGAAGAGTTTGACACATTTCCAACATCAAGATCACATGATGCAGTGAGAATGAGGTACGATAGACTTAGAACCGTTGCAGGTAGGATTCAAACAATTGTTGGCGACATAGCTACACAAGGGGAGAGGTTTATGTCTCTACTGAGCTGGAGAGACCCTAGAGGAACTACACTGTTTGTGTTGTTTAGCCTTTGTGCAGCTGTGATTTTCTATGCAACACCATTTAGAGTTGTGGTTTTGGTGACAGGTTTGTATAATTTGAGACATCCAAAGTTTAGGAACAAACTACCTTCTGTTCCGAGTAATTTCTTCAAGAGGCTCCCTGCTAGAACAGATAGTTTACTGTAA
Protein sequence

>Msa0632720

MKLIVEVINAHDLMPKDGEGSASTFVEVDFENQLSRTRTVPKNLNPTWNQKLVFNLDTTKPYHHKTIEVSVYNDRRQPIPGRNFLGRVRIPCSNIVKEGDEVYQILPLENKWFFSSVKGEIGLKVYIASESKAKDFSPIFSSKLEKLSPSTPKQEPESTDTNLPPLHGTPSTTETLEADPNEEGSALDASKETTEVEKVYSVAASNYSIEESQSSSIDIDQEPKIEIEEPVEQISSQKLDKHQVHQQPRISIKKRPQENLITMHSVDPQLQSSRAENYNHRNDSNMQPRISIKRRPRPQGIPPSTTYSVNPQVHPRYDERYNLKGPNQQPRILVETPRHVSSPPRHCEDSQGIPSSTTYSVNPQVHPRYDERYNLKGTNQQPRILVETPRHVASSPRHGVDPQVHTSNDENYSVEETTNPQIGEKWPSGGAYDGRKWTSSGERLTMKAKDLTPGTITSSCDPYVEVKLGNYRGRTKHFEKKLNPEWNQVFAFSKDRIQSSVLEVFVKDKEMVGRDDYLGRVIFDLDEIPTRVPPDSPLAPQWYRLQHLRGEGMVRGDIMLAVWMGTQADEAFSDAWHSDAATVYGEGVFNIRSKVYVSPKLWYLRVNVIEAQDVIPSDRNRLPEVSVKAQLGCQVLKTKICSTRTTTPLWNEDLVFVAAEPFEEQLTITVEDHVQPSKDEVLGRISLPLNLFEKRLDHRPVHSRWFSLEKFGFGALEGDRRNEQKFSSRIHLRVCLEGGYHVLDESTLYISDQRPTARQLWKQPIGILEMGILGAKGLLPMKMKDGHGSTDAYCVAKYGQKWIRTRTLLDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGEKAPSGSSIKDSRIGKVRIRLSTLEANKIYTNSYPLLVLHQHGVKKMGELQLTVRFTALSLANMFHIYGQPLLPKMHYLQPFTVNQIDNLRYQAMNIVAMRLGRAEPPLRKEVVEYMLDVDSNIWSMRRSKANFFRVMSLFSGLITIGRWFNDVCHWKNHITSILVHILFLILIWYPELILPTCFLYMFLIGLWNYRFRPRQPPHMDTKLSWAESVHPDELDEEFDTFPTSRSHDAVRMRYDRLRTVAGRIQTIVGDIATQGERFMSLLSWRDPRGTTLFVLFSLCAAVIFYATPFRVVVLVTGLYNLRHPKFRNKLPSVPSNFFKRLPARTDSLL*