Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0108880 | XP_013466946.1 | 97.575 | 701 | 17 | 0 | 1 | 701 | 1 | 701 | 0.0 | 1432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0108880 | sp|Q9SS87|SEOB_ARATH | 27.716 | 718 | 444 | 23 | 27 | 683 | 34 | 737 | 5.72e-66 | 234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0108880 | E2FKJ2 | 97.575 | 701 | 17 | 0 | 1 | 701 | 1 | 701 | 0.0 | 1432 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002580 | Msa0108880 | 0.823745 | 1.173613e-53 | -8.615850e-47 |
| Msa0003080 | Msa0108880 | 0.828601 | 8.211973e-55 | -8.615850e-47 |
| Msa0009780 | Msa0108880 | 0.814760 | 1.307149e-51 | -8.615850e-47 |
| Msa0015150 | Msa0108880 | 0.960867 | 4.797647e-119 | -8.615850e-47 |
| Msa0016040 | Msa0108880 | 0.823233 | 1.546769e-53 | -8.615850e-47 |
| Msa0019900 | Msa0108880 | 0.803912 | 2.779740e-49 | -8.615850e-47 |
| Msa0025160 | Msa0108880 | 0.866000 | 3.924084e-65 | -8.615850e-47 |
| Msa0025580 | Msa0108880 | 0.836279 | 1.026859e-56 | -8.615850e-47 |
| Msa0027280 | Msa0108880 | 0.826884 | 2.122950e-54 | -8.615850e-47 |
| Msa0029960 | Msa0108880 | 0.912459 | 1.901709e-83 | -8.615850e-47 |
| Msa0029970 | Msa0108880 | 0.891652 | 3.265270e-74 | -8.615850e-47 |
| Msa0029990 | Msa0108880 | 0.881710 | 1.914827e-70 | -8.615850e-47 |
| Msa0032460 | Msa0108880 | 0.807359 | 5.253715e-50 | -8.615850e-47 |
| Msa0034210 | Msa0108880 | 0.860523 | 1.946542e-63 | -8.615850e-47 |
| Msa0043290 | Msa0108880 | 0.820008 | 8.606234e-53 | -8.615850e-47 |
| Msa0048510 | Msa0108880 | 0.806768 | 7.007269e-50 | -8.615850e-47 |
| Msa0050660 | Msa0108880 | 0.869285 | 3.471778e-66 | -8.615850e-47 |
| Msa0050700 | Msa0108880 | 0.871373 | 7.178675e-67 | -8.615850e-47 |
| Msa0050790 | Msa0108880 | 0.865979 | 3.984093e-65 | -8.615850e-47 |
| Msa0054690 | Msa0108880 | 0.812167 | 4.858809e-51 | -8.615850e-47 |
| Msa0061350 | Msa0108880 | 0.841269 | 5.263533e-58 | -8.615850e-47 |
| Msa0064120 | Msa0108880 | 0.925275 | 2.288757e-90 | -8.615850e-47 |
| Msa0068150 | Msa0108880 | 0.806505 | 7.960718e-50 | -8.615850e-47 |
| Msa0071840 | Msa0108880 | 0.886255 | 4.011124e-72 | -8.615850e-47 |
| Msa0071850 | Msa0108880 | 0.922164 | 1.403197e-88 | -8.615850e-47 |
| Msa0071860 | Msa0108880 | 0.915411 | 6.077315e-85 | -8.615850e-47 |
| Msa0071880 | Msa0108880 | 0.850782 | 1.358776e-60 | -8.615850e-47 |
| Msa0072520 | Msa0108880 | 0.854224 | 1.419686e-61 | -8.615850e-47 |
| Msa0073120 | Msa0108880 | 0.831698 | 1.439954e-55 | -8.615850e-47 |
| Msa0077340 | Msa0108880 | 0.813045 | 3.122088e-51 | -8.615850e-47 |
| Msa0077560 | Msa0108880 | 0.802704 | 4.943432e-49 | -8.615850e-47 |
| Msa0089460 | Msa0108880 | 0.809381 | 1.946355e-50 | -8.615850e-47 |
| Msa0094780 | Msa0108880 | 0.806586 | 7.653619e-50 | -8.615850e-47 |
| Msa0108880 | Msa0113340 | 0.801208 | 1.003621e-48 | -8.615850e-47 |
| Msa0108880 | Msa0120790 | 0.854224 | 1.419376e-61 | -8.615850e-47 |
| Msa0108880 | Msa0121330 | 0.844761 | 6.189844e-59 | -8.615850e-47 |
| Msa0108880 | Msa0123070 | 0.814705 | 1.344504e-51 | -8.615850e-47 |
| Msa0108880 | Msa0125200 | 0.885568 | 7.271560e-72 | -8.615850e-47 |
| Msa0108880 | Msa0125210 | 0.904448 | 1.214969e-79 | -8.615850e-47 |
| Msa0108880 | Msa0125360 | 0.813099 | 3.038338e-51 | -8.615850e-47 |
| Msa0108880 | Msa0128310 | 0.860110 | 2.595405e-63 | -8.615850e-47 |
| Msa0108880 | Msa0137210 | 0.813332 | 2.699988e-51 | -8.615850e-47 |
| Msa0108880 | Msa0140280 | 0.802334 | 5.892884e-49 | -8.615850e-47 |
| Msa0108880 | Msa0143670 | 0.826135 | 3.202459e-54 | -8.615850e-47 |
| Msa0108880 | Msa0146650 | 0.845483 | 3.948166e-59 | -8.615850e-47 |
| Msa0108880 | Msa0149350 | 0.813857 | 2.069516e-51 | -8.615850e-47 |
| Msa0108880 | Msa0155180 | 0.934314 | 4.890932e-96 | -8.615850e-47 |
| Msa0108880 | Msa0159590 | 0.807086 | 6.000798e-50 | -8.615850e-47 |
| Msa0108880 | Msa0161930 | 0.836603 | 8.494322e-57 | -8.615850e-47 |
| Msa0108880 | Msa0164400 | 0.826566 | 2.529036e-54 | -8.615850e-47 |
| Msa0108880 | Msa0166170 | 0.803787 | 2.950306e-49 | -8.615850e-47 |
| Msa0108880 | Msa0174440 | 0.854883 | 9.146470e-62 | -8.615850e-47 |
| Msa0108880 | Msa0174450 | 0.805826 | 1.106755e-49 | -8.615850e-47 |
| Msa0108880 | Msa0182400 | 0.814621 | 1.403140e-51 | -8.615850e-47 |
| Msa0108880 | Msa0188610 | 0.846654 | 1.896400e-59 | -8.615850e-47 |
| Msa0108880 | Msa0190570 | 0.804260 | 2.352592e-49 | -8.615850e-47 |
| Msa0108880 | Msa0190730 | 0.807245 | 5.554958e-50 | -8.615850e-47 |
| Msa0108880 | Msa0193850 | 0.803807 | 2.922816e-49 | -8.615850e-47 |
| Msa0108880 | Msa0194820 | 0.822357 | 2.473227e-53 | -8.615850e-47 |
| Msa0108880 | Msa0194840 | 0.816932 | 4.284709e-52 | -8.615850e-47 |
| Msa0108880 | Msa0200050 | 0.805583 | 1.244847e-49 | -8.615850e-47 |
| Msa0108880 | Msa0205570 | 0.813732 | 2.205145e-51 | -8.615850e-47 |
| Msa0108880 | Msa0213030 | 0.837191 | 6.011961e-57 | -8.615850e-47 |
| Msa0108880 | Msa0230800 | 0.849769 | 2.614451e-60 | -8.615850e-47 |
| Msa0108880 | Msa0230870 | 0.861576 | 9.309614e-64 | -8.615850e-47 |
| Msa0108880 | Msa0232760 | 0.804737 | 1.870853e-49 | -8.615850e-47 |
| Msa0108880 | Msa0233020 | 0.810996 | 8.729830e-51 | -8.615850e-47 |
| Msa0108880 | Msa0235710 | 0.804371 | 2.230635e-49 | -8.615850e-47 |
| Msa0108880 | Msa0238720 | 0.800694 | 1.277724e-48 | -8.615850e-47 |
| Msa0108880 | Msa0251620 | 0.801778 | 7.670060e-49 | -8.615850e-47 |
| Msa0108880 | Msa0270340 | 0.844833 | 5.918869e-59 | -8.615850e-47 |
| Msa0108880 | Msa0272260 | 0.804689 | 1.914868e-49 | -8.615850e-47 |
| Msa0108880 | Msa0298470 | 0.803382 | 3.580872e-49 | -8.615850e-47 |
| Msa0108880 | Msa0307270 | 0.800176 | 1.629654e-48 | -8.615850e-47 |
| Msa0108880 | Msa0314170 | 0.810425 | 1.159925e-50 | -8.615850e-47 |
| Msa0108880 | Msa0342840 | 0.821063 | 4.927642e-53 | -8.615850e-47 |
| Msa0108880 | Msa0359010 | 0.845363 | 4.256314e-59 | -8.615850e-47 |
| Msa0108880 | Msa0359020 | 0.811271 | 7.608725e-51 | -8.615850e-47 |
| Msa0108880 | Msa0367150 | 0.811987 | 5.318970e-51 | -8.615850e-47 |
| Msa0108880 | Msa0369790 | 0.822520 | 2.266817e-53 | -8.615850e-47 |
| Msa0108880 | Msa0380670 | 0.802289 | 6.019539e-49 | -8.615850e-47 |
| Msa0108880 | Msa0381730 | 0.816545 | 5.233243e-52 | -8.615850e-47 |
| Msa0108880 | Msa0382530 | 0.867678 | 1.146084e-65 | -8.615850e-47 |
| Msa0108880 | Msa0383000 | 0.802485 | 5.485996e-49 | -8.615850e-47 |
| Msa0108880 | Msa0384870 | 0.812303 | 4.536853e-51 | -8.615850e-47 |
| Msa0108880 | Msa0385220 | 0.806097 | 9.707539e-50 | -8.615850e-47 |
| Msa0108880 | Msa0405680 | 0.868660 | 5.537091e-66 | -8.615850e-47 |
| Msa0108880 | Msa0415610 | 0.847459 | 1.140797e-59 | -8.615850e-47 |
| Msa0108880 | Msa0418970 | 0.903646 | 2.797884e-79 | -8.615850e-47 |
| Msa0108880 | Msa0422050 | 0.832849 | 7.476339e-56 | -8.615850e-47 |
| Msa0108880 | Msa0424490 | 0.828792 | 7.381968e-55 | -8.615850e-47 |
| Msa0108880 | Msa0426530 | 0.802089 | 6.619433e-49 | -8.615850e-47 |
| Msa0108880 | Msa0431200 | 0.819657 | 1.035319e-52 | -8.615850e-47 |
| Msa0108880 | Msa0432010 | 0.828858 | 7.116390e-55 | -8.615850e-47 |
| Msa0108880 | Msa0432320 | 0.868113 | 8.310222e-66 | -8.615850e-47 |
| Msa0108880 | Msa0433150 | 0.807920 | 3.993010e-50 | -8.615850e-47 |
| Msa0108880 | Msa0433760 | 0.811401 | 7.133242e-51 | -8.615850e-47 |
| Msa0108880 | Msa0435210 | 0.801280 | 9.698683e-49 | -8.615850e-47 |
| Msa0108880 | Msa0435550 | 0.808022 | 3.798221e-50 | -8.615850e-47 |
| Msa0108880 | Msa0436910 | 0.828312 | 9.644147e-55 | -8.615850e-47 |
| Msa0108880 | Msa0451170 | 0.850339 | 1.810397e-60 | -8.615850e-47 |
| Msa0108880 | Msa0457570 | 0.803816 | 2.910624e-49 | -8.615850e-47 |
| Msa0108880 | Msa0460550 | 0.917084 | 8.161997e-86 | -8.615850e-47 |
| Msa0108880 | Msa0460630 | 0.875965 | 2.032836e-68 | -8.615850e-47 |
| Msa0108880 | Msa0464000 | 0.821272 | 4.409547e-53 | -8.615850e-47 |
| Msa0108880 | Msa0466520 | 0.811193 | 7.913603e-51 | -8.615850e-47 |
| Msa0108880 | Msa0468700 | 0.814808 | 1.275526e-51 | -8.615850e-47 |
| Msa0108880 | Msa0471460 | 0.854447 | 1.223193e-61 | -8.615850e-47 |
| Msa0108880 | Msa0471540 | 0.834457 | 2.963763e-56 | -8.615850e-47 |
| Msa0108880 | Msa0472950 | 0.802348 | 5.853664e-49 | -8.615850e-47 |
| Msa0108880 | Msa0477630 | 0.808205 | 3.471681e-50 | -8.615850e-47 |
| Msa0108880 | Msa0479320 | 0.810576 | 1.075939e-50 | -8.615850e-47 |
| Msa0108880 | Msa0481890 | 0.823776 | 1.154684e-53 | -8.615850e-47 |
| Msa0108880 | Msa0482080 | 0.841523 | 4.512899e-58 | -8.615850e-47 |
| Msa0108880 | Msa0498610 | 0.831162 | 1.951147e-55 | -8.615850e-47 |
| Msa0108880 | Msa0509550 | 0.818717 | 1.694162e-52 | -8.615850e-47 |
| Msa0108880 | Msa0513080 | 0.813652 | 2.296469e-51 | -8.615850e-47 |
| Msa0108880 | Msa0514580 | 0.807217 | 5.629642e-50 | -8.615850e-47 |
| Msa0108880 | Msa0517250 | 0.825155 | 5.469339e-54 | -8.615850e-47 |
| Msa0108880 | Msa0520260 | 0.819919 | 9.020029e-53 | -8.615850e-47 |
| Msa0108880 | Msa0520870 | 0.820424 | 6.910919e-53 | -8.615850e-47 |
| Msa0108880 | Msa0521680 | 0.820510 | 6.604068e-53 | -8.615850e-47 |
| Msa0108880 | Msa0525210 | 0.871508 | 6.477908e-67 | -8.615850e-47 |
| Msa0108880 | Msa0526010 | 0.816956 | 4.233331e-52 | -8.615850e-47 |
| Msa0108880 | Msa0528570 | 0.864409 | 1.241985e-64 | -8.615850e-47 |
| Msa0108880 | Msa0529030 | 0.842873 | 1.981351e-58 | -8.615850e-47 |
| Msa0108880 | Msa0531960 | 0.846973 | 1.551533e-59 | -8.615850e-47 |
| Msa0108880 | Msa0541300 | 0.840029 | 1.111919e-57 | -8.615850e-47 |
| Msa0108880 | Msa0541310 | 0.838593 | 2.622205e-57 | -8.615850e-47 |
| Msa0108880 | Msa0543660 | 0.810363 | 1.196569e-50 | -8.615850e-47 |
| Msa0108880 | Msa0546800 | 0.820882 | 5.424309e-53 | -8.615850e-47 |
| Msa0108880 | Msa0557460 | 0.834209 | 3.421003e-56 | -8.615850e-47 |
| Msa0108880 | Msa0562350 | 0.843787 | 1.130231e-58 | -8.615850e-47 |
| Msa0108880 | Msa0562560 | 0.852716 | 3.844938e-61 | -8.615850e-47 |
| Msa0108880 | Msa0562620 | 0.848785 | 4.913308e-60 | -8.615850e-47 |
| Msa0108880 | Msa0563940 | 0.805170 | 1.519191e-49 | -8.615850e-47 |
| Msa0108880 | Msa0565640 | 0.804896 | 1.733649e-49 | -8.615850e-47 |
| Msa0108880 | Msa0567170 | 0.813438 | 2.560001e-51 | -8.615850e-47 |
| Msa0108880 | Msa0570010 | 0.822223 | 2.657612e-53 | -8.615850e-47 |
| Msa0108880 | Msa0574050 | 0.812378 | 4.370473e-51 | -8.615850e-47 |
| Msa0108880 | Msa0579780 | 0.836690 | 8.070952e-57 | -8.615850e-47 |
| Msa0108880 | Msa0580200 | 0.804682 | 1.921647e-49 | -8.615850e-47 |
| Msa0108880 | Msa0580370 | 0.802372 | 5.788964e-49 | -8.615850e-47 |
| Msa0108880 | Msa0580810 | 0.831433 | 1.674282e-55 | -8.615850e-47 |
| Msa0108880 | Msa0584420 | 0.807764 | 4.309126e-50 | -8.615850e-47 |
| Msa0108880 | Msa0585020 | 0.830251 | 3.263356e-55 | -8.615850e-47 |
| Msa0108880 | Msa0588920 | 0.855639 | 5.513023e-62 | -8.615850e-47 |
| Msa0108880 | Msa0597270 | 0.843748 | 1.157588e-58 | -8.615850e-47 |
| Msa0108880 | Msa0609300 | 0.875541 | 2.841104e-68 | -8.615850e-47 |
| Msa0108880 | Msa0616210 | 0.841029 | 6.087371e-58 | -8.615850e-47 |
| Msa0108880 | Msa0616510 | 0.836785 | 7.634996e-57 | -8.615850e-47 |
| Msa0108880 | Msa0619710 | 0.800398 | 1.468369e-48 | -8.615850e-47 |
| Msa0108880 | Msa0621710 | 0.855550 | 5.852348e-62 | -8.615850e-47 |
| Msa0108880 | Msa0622110 | 0.814912 | 1.210028e-51 | -8.615850e-47 |
| Msa0108880 | Msa0632720 | 0.804680 | 1.923441e-49 | -8.615850e-47 |
| Msa0108880 | Msa0640200 | 0.807788 | 4.259467e-50 | -8.615850e-47 |
| Msa0108880 | Msa0649840 | 0.851839 | 6.832237e-61 | -8.615850e-47 |
| Msa0108880 | Msa0650750 | 0.803184 | 3.934736e-49 | -8.615850e-47 |
| Msa0108880 | Msa0655700 | 0.861143 | 1.262015e-63 | -8.615850e-47 |
| Msa0108880 | Msa0655910 | 0.859243 | 4.734357e-63 | -8.615850e-47 |
| Msa0108880 | Msa0657210 | 0.807029 | 6.171897e-50 | -8.615850e-47 |
| Msa0108880 | Msa0657440 | 0.845198 | 4.717023e-59 | -8.615850e-47 |
| Msa0108880 | Msa0661150 | 0.817328 | 3.491428e-52 | -8.615850e-47 |
| Msa0108880 | Msa0666700 | 0.853238 | 2.727006e-61 | -8.615850e-47 |
| Msa0108880 | Msa0674480 | 0.814569 | 1.441178e-51 | -8.615850e-47 |
| Msa0108880 | Msa0675330 | 0.834775 | 2.466681e-56 | -8.615850e-47 |
| Msa0108880 | Msa0678490 | 0.808531 | 2.958474e-50 | -8.615850e-47 |
| Msa0108880 | Msa0691910 | 0.883722 | 3.525956e-71 | -8.615850e-47 |
| Msa0108880 | Msa0693890 | 0.841606 | 4.290299e-58 | -8.615850e-47 |
| Msa0108880 | Msa0699540 | 0.842196 | 2.996588e-58 | -8.615850e-47 |
| Msa0108880 | Msa0699840 | 0.841872 | 3.649749e-58 | -8.615850e-47 |
| Msa0108880 | Msa0700460 | 0.810042 | 1.403439e-50 | -8.615850e-47 |
| Msa0108880 | Msa0701720 | 0.842392 | 2.660025e-58 | -8.615850e-47 |
| Msa0108880 | Msa0706150 | 0.810324 | 1.219747e-50 | -8.615850e-47 |
| Msa0108880 | Msa0709440 | 0.825281 | 5.105552e-54 | -8.615850e-47 |
| Msa0108880 | Msa0713960 | 0.821710 | 3.492927e-53 | -8.615850e-47 |
| Msa0108880 | Msa0725750 | 0.824091 | 9.739468e-54 | -8.615850e-47 |
| Msa0108880 | Msa0735780 | 0.812614 | 3.879415e-51 | -8.615850e-47 |
| Msa0108880 | Msa0736440 | 0.812343 | 4.445900e-51 | -8.615850e-47 |
| Msa0108880 | Msa0738700 | 0.887138 | 1.855962e-72 | -8.615850e-47 |
| Msa0108880 | Msa0740090 | 0.858622 | 7.262133e-63 | -8.615850e-47 |
| Msa0108880 | Msa0740710 | 0.838994 | 2.065889e-57 | -8.615850e-47 |
| Msa0108880 | Msa0741220 | 0.802229 | 6.193943e-49 | -8.615850e-47 |
| Msa0108880 | Msa0743440 | 0.815442 | 9.223317e-52 | -8.615850e-47 |
| Msa0108880 | Msa0756490 | 0.807416 | 5.108872e-50 | -8.615850e-47 |
| Msa0108880 | Msa0761670 | 0.809247 | 2.079778e-50 | -8.615850e-47 |
| Msa0108880 | Msa0773630 | 0.828750 | 7.556638e-55 | -8.615850e-47 |
| Msa0108880 | Msa0780910 | 0.840562 | 8.071594e-58 | -8.615850e-47 |
| Msa0108880 | Msa0782750 | 0.879192 | 1.522695e-69 | -8.615850e-47 |
| Msa0108880 | Msa0795870 | 0.804328 | 2.276901e-49 | -8.615850e-47 |
| Msa0108880 | Msa0800200 | 0.807255 | 5.526617e-50 | -8.615850e-47 |
| Msa0108880 | Msa0811020 | 0.816556 | 5.204705e-52 | -8.615850e-47 |
| Msa0108880 | Msa0819170 | 0.840803 | 6.976698e-58 | -8.615850e-47 |
| Msa0108880 | Msa0820380 | 0.868382 | 6.804492e-66 | -8.615850e-47 |
| Msa0108880 | Msa0821160 | 0.827173 | 1.811159e-54 | -8.615850e-47 |
| Msa0108880 | Msa0824450 | 0.802034 | 6.795086e-49 | -8.615850e-47 |
| Msa0108880 | Msa0829300 | 0.830096 | 3.560255e-55 | -8.615850e-47 |
| Msa0108880 | Msa0829330 | 0.820932 | 5.281967e-53 | -8.615850e-47 |
| Msa0108880 | Msa0833650 | 0.804323 | 2.282442e-49 | -8.615850e-47 |
| Msa0108880 | Msa0835350 | 0.824618 | 7.321517e-54 | -8.615850e-47 |
| Msa0108880 | Msa0837460 | 0.805288 | 1.435251e-49 | -8.615850e-47 |
| Msa0108880 | Msa0849650 | 0.833089 | 6.513669e-56 | -8.615850e-47 |
| Msa0108880 | Msa0859290 | 0.877584 | 5.588064e-69 | -8.615850e-47 |
| Msa0108880 | Msa0860790 | 0.814103 | 1.826407e-51 | -8.615850e-47 |
| Msa0108880 | Msa0864940 | 0.801908 | 7.211232e-49 | -8.615850e-47 |
| Msa0108880 | Msa0894790 | 0.831134 | 1.982568e-55 | -8.615850e-47 |
| Msa0108880 | Msa0909760 | 0.802591 | 5.217557e-49 | -8.615850e-47 |
| Msa0108880 | Msa0921590 | 0.843027 | 1.803318e-58 | -8.615850e-47 |
| Msa0108880 | Msa0931590 | 0.837936 | 3.872250e-57 | -8.615850e-47 |
| Msa0108880 | Msa0960260 | 0.821741 | 3.435606e-53 | -8.615850e-47 |
| Msa0108880 | Msa0994720 | 0.815681 | 8.163771e-52 | -8.615850e-47 |
| Msa0108880 | Msa1009950 | 0.820352 | 7.176906e-53 | -8.615850e-47 |
| Msa0108880 | Msa1014320 | 0.917846 | 3.226655e-86 | -8.615850e-47 |
| Msa0108880 | Msa1021780 | 0.874662 | 5.666416e-68 | -8.615850e-47 |
| Msa0108880 | Msa1029800 | 0.821078 | 4.888302e-53 | -8.615850e-47 |
| Msa0108880 | Msa1035610 | 0.802237 | 6.171804e-49 | -8.615850e-47 |
| Msa0108880 | Msa1040150 | 0.829150 | 6.047165e-55 | -8.615850e-47 |
| Msa0108880 | Msa1042160 | 0.864856 | 8.995066e-65 | -8.615850e-47 |
| Msa0108880 | Msa1042190 | 0.868089 | 8.457684e-66 | -8.615850e-47 |
| Msa0108880 | Msa1055310 | 0.883703 | 3.585252e-71 | -8.615850e-47 |
| Msa0108880 | Msa1068920 | 0.813459 | 2.532000e-51 | -8.615850e-47 |
| Msa0108880 | Msa1072940 | 0.817855 | 2.655607e-52 | -8.615850e-47 |
| Msa0108880 | Msa1078820 | 0.845451 | 4.028182e-59 | -8.615850e-47 |
| Msa0108880 | Msa1078880 | 0.833894 | 4.103013e-56 | -8.615850e-47 |
| Msa0108880 | Msa1078970 | 0.826200 | 3.091326e-54 | -8.615850e-47 |
| Msa0108880 | Msa1080000 | 0.807851 | 4.130025e-50 | -8.615850e-47 |
| Msa0108880 | Msa1081690 | 0.831576 | 1.543199e-55 | -8.615850e-47 |
| Msa0108880 | Msa1084530 | 0.825709 | 4.042855e-54 | -8.615850e-47 |
| Msa0108880 | Msa1090140 | 0.800323 | 1.520891e-48 | -8.615850e-47 |
| Msa0108880 | Msa1116660 | 0.800504 | 1.397515e-48 | -8.615850e-47 |
| Msa0108880 | Msa1123970 | 0.851112 | 1.096858e-60 | -8.615850e-47 |
| Msa0108880 | Msa1125250 | 0.812118 | 4.980080e-51 | -8.615850e-47 |
| Msa0108880 | Msa1125820 | 0.831182 | 1.929418e-55 | -8.615850e-47 |
| Msa0108880 | Msa1125990 | 0.832563 | 8.802183e-56 | -8.615850e-47 |
| Msa0108880 | Msa1128130 | 0.803583 | 3.253346e-49 | -8.615850e-47 |
| Msa0108880 | Msa1131150 | 0.810683 | 1.020539e-50 | -8.615850e-47 |
| Msa0108880 | Msa1132530 | 0.822091 | 2.851775e-53 | -8.615850e-47 |
| Msa0108880 | Msa1132840 | 0.800484 | 1.410378e-48 | -8.615850e-47 |
| Msa0108880 | Msa1160920 | 0.800061 | 1.719696e-48 | -8.615850e-47 |
| Msa0108880 | Msa1162880 | 0.800752 | 1.243829e-48 | -8.615850e-47 |
| Msa0108880 | Msa1166190 | 0.800367 | 1.489802e-48 | -8.615850e-47 |
| Msa0108880 | Msa1167470 | 0.858886 | 6.054351e-63 | -8.615850e-47 |
| Msa0108880 | Msa1169190 | 0.830612 | 2.662862e-55 | -8.615850e-47 |
| Msa0108880 | Msa1169650 | 0.849047 | 4.154143e-60 | -8.615850e-47 |
| Msa0108880 | Msa1171290 | 0.819501 | 1.123874e-52 | -8.615850e-47 |
| Msa0108880 | Msa1187760 | 0.869803 | 2.354252e-66 | -8.615850e-47 |
| Msa0108880 | Msa1188170 | 0.835514 | 1.605268e-56 | -8.615850e-47 |
| Msa0108880 | Msa1194240 | 0.829559 | 4.810997e-55 | -8.615850e-47 |
| Msa0108880 | Msa1198540 | 0.803239 | 3.833698e-49 | -8.615850e-47 |
| Msa0108880 | Msa1208950 | 0.812090 | 5.048777e-51 | -8.615850e-47 |
| Msa0108880 | Msa1209320 | 0.850829 | 1.318708e-60 | -8.615850e-47 |
| Msa0108880 | Msa1209720 | 0.827621 | 1.414159e-54 | -8.615850e-47 |
| Msa0108880 | Msa1211640 | 0.809828 | 1.559942e-50 | -8.615850e-47 |
| Msa0108880 | Msa1215870 | 0.801338 | 9.438077e-49 | -8.615850e-47 |
| Msa0108880 | Msa1216110 | 0.802344 | 5.866962e-49 | -8.615850e-47 |
| Msa0108880 | Msa1223390 | 0.813795 | 2.136141e-51 | -8.615850e-47 |
| Msa0108880 | Msa1223570 | 0.808328 | 3.268966e-50 | -8.615850e-47 |
| Msa0108880 | Msa1226520 | 0.803319 | 3.690206e-49 | -8.615850e-47 |
| Msa0108880 | Msa1228420 | 0.801380 | 9.252721e-49 | -8.615850e-47 |
| Msa0108880 | Msa1228630 | 0.831792 | 1.365350e-55 | -8.615850e-47 |
| Msa0108880 | Msa1254540 | 0.836880 | 7.219291e-57 | -8.615850e-47 |
| Msa0108880 | Msa1262860 | 0.841050 | 6.010153e-58 | -8.615850e-47 |
| Msa0108880 | Msa1263740 | 0.816224 | 6.175040e-52 | -8.615850e-47 |
| Msa0108880 | Msa1263780 | 0.841962 | 3.455451e-58 | -8.615850e-47 |
| Msa0108880 | Msa1265650 | 0.823099 | 1.661898e-53 | -8.615850e-47 |
| Msa0108880 | Msa1268630 | 0.837129 | 6.235344e-57 | -8.615850e-47 |
| Msa0108880 | Msa1284120 | 0.818830 | 1.596830e-52 | -8.615850e-47 |
| Msa0108880 | Msa1290380 | 0.816950 | 4.246120e-52 | -8.615850e-47 |
| Msa0108880 | Msa1290440 | 0.812984 | 3.219620e-51 | -8.615850e-47 |
| Msa0108880 | Msa1294460 | 0.805675 | 1.190601e-49 | -8.615850e-47 |
| Msa0108880 | Msa1303560 | 0.825268 | 5.142909e-54 | -8.615850e-47 |
| Msa0108880 | Msa1303650 | 0.826184 | 3.117642e-54 | -8.615850e-47 |
| Msa0108880 | Msa1304950 | 0.808595 | 2.867499e-50 | -8.615850e-47 |
| Msa0108880 | Msa1315160 | 0.828764 | 7.497055e-55 | -8.615850e-47 |
| Msa0108880 | Msa1327800 | 0.830980 | 2.163444e-55 | -8.615850e-47 |
| Msa0108880 | Msa1332950 | 0.806981 | 6.317834e-50 | -8.615850e-47 |
| Msa0108880 | Msa1341890 | 0.839567 | 1.466983e-57 | -8.615850e-47 |
| Msa0108880 | Msa1342810 | 0.800570 | 1.354465e-48 | -8.615850e-47 |
| Msa0108880 | Msa1343180 | 0.813817 | 2.111964e-51 | -8.615850e-47 |
| Msa0108880 | Msa1349690 | 0.817850 | 2.662649e-52 | -8.615850e-47 |
| Msa0108880 | Msa1356220 | 0.819464 | 1.145646e-52 | -8.615850e-47 |
| Msa0108880 | Msa1356350 | 0.831439 | 1.668471e-55 | -8.615850e-47 |
| Msa0108880 | Msa1358290 | 0.823263 | 1.521784e-53 | -8.615850e-47 |
| Msa0108880 | Msa1359690 | 0.813067 | 3.087107e-51 | -8.615850e-47 |
| Msa0108880 | Msa1364410 | 0.821337 | 4.259328e-53 | -8.615850e-47 |
| Msa0108880 | Msa1367840 | 0.809694 | 1.667454e-50 | -8.615850e-47 |
| Msa0108880 | Msa1368750 | 0.827161 | 1.822816e-54 | -8.615850e-47 |
| Msa0108880 | Msa1369010 | 0.801710 | 7.917060e-49 | -8.615850e-47 |
| Msa0108880 | Msa1372040 | 0.812800 | 3.533242e-51 | -8.615850e-47 |
| Msa0108880 | Msa1374790 | 0.829518 | 4.921998e-55 | -8.615850e-47 |
| Msa0108880 | Msa1380120 | 0.850945 | 1.222383e-60 | -8.615850e-47 |
| Msa0108880 | Msa1381030 | 0.816478 | 5.417123e-52 | -8.615850e-47 |
| Msa0108880 | Msa1381470 | 0.818878 | 1.557833e-52 | -8.615850e-47 |
| Msa0108880 | Msa1382590 | 0.810545 | 1.093087e-50 | -8.615850e-47 |
| Msa0108880 | Msa1383310 | 0.825222 | 5.272779e-54 | -8.615850e-47 |
| Msa0108880 | Msa1384150 | 0.803407 | 3.538132e-49 | -8.615850e-47 |
| Msa0108880 | Msa1384460 | 0.809569 | 1.773584e-50 | -8.615850e-47 |
| Msa0108880 | Msa1392740 | 0.808947 | 2.411258e-50 | -8.615850e-47 |
| Msa0108880 | Msa1393780 | 0.820363 | 7.137973e-53 | -8.615850e-47 |
| Msa0108880 | Msa1400010 | 0.841698 | 4.057678e-58 | -8.615850e-47 |
| Msa0108880 | Msa1404480 | 0.800974 | 1.120293e-48 | -8.615850e-47 |
| Msa0108880 | Msa1405460 | 0.838317 | 3.090692e-57 | -8.615850e-47 |
| Msa0108880 | Msa1406720 | 0.817724 | 2.843257e-52 | -8.615850e-47 |
| Msa0108880 | Msa1409410 | 0.860578 | 1.872997e-63 | -8.615850e-47 |
| Msa0108880 | Msa1415540 | 0.866715 | 2.328686e-65 | -8.615850e-47 |
| Msa0108880 | Msa1417370 | 0.801520 | 8.663868e-49 | -8.615850e-47 |
| Msa0108880 | Msa1429860 | 0.867550 | 1.260177e-65 | -8.615850e-47 |
| Msa0108880 | Msa1433790 | 0.850465 | 1.668497e-60 | -8.615850e-47 |
| Msa0108880 | Msa1435630 | 0.868874 | 4.721452e-66 | -8.615850e-47 |
| Msa0108880 | Msa1437930 | 0.802903 | 4.497283e-49 | -8.615850e-47 |
| Msa0108880 | Msa1440430 | 0.816764 | 4.673884e-52 | -8.615850e-47 |
| Msa0108880 | Msa1440630 | 0.869395 | 3.198250e-66 | -8.615850e-47 |
| Msa0108880 | Msa1445120 | 0.802636 | 5.107326e-49 | -8.615850e-47 |
| Msa0108880 | Msa1450190 | 0.806896 | 6.584108e-50 | -8.615850e-47 |
| Msa0108880 | Msa1451820 | 0.829655 | 4.560015e-55 | -8.615850e-47 |
| Msa0108880 | Msa1452140 | 0.859135 | 5.098657e-63 | -8.615850e-47 |
| Msa0108880 | Msa1457840 | 0.814567 | 1.442984e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0108880 | MtrunA17_Chr1g0165791 | 97.575 | 701 | 17 | 0 | 1 | 701 | 1 | 701 | 0.0 | 1432 |
| Msa0108880 | MtrunA17_Chr1g0187001 | 46.852 | 683 | 310 | 15 | 16 | 687 | 2 | 642 | 0.0 | 586 |
| Msa0108880 | MtrunA17_Chr1g0186981 | 42.544 | 684 | 356 | 9 | 2 | 677 | 8 | 662 | 0.0 | 548 |
| Msa0108880 | MtrunA17_Chr1g0186991 | 42.522 | 682 | 357 | 13 | 5 | 677 | 11 | 666 | 1.17e-171 | 507 |
| Msa0108880 | MtrunA17_Chr1g0186841 | 37.668 | 669 | 392 | 11 | 24 | 685 | 20 | 670 | 3.18e-150 | 452 |
| Msa0108880 | MtrunA17_Chr1g0186851 | 36.132 | 667 | 402 | 10 | 25 | 685 | 20 | 668 | 2.42e-149 | 449 |
| Msa0108880 | MtrunA17_Chr1g0187041 | 35.693 | 664 | 397 | 11 | 24 | 677 | 19 | 662 | 3.74e-142 | 431 |
| Msa0108880 | MtrunA17_Chr1g0186861 | 35.045 | 662 | 404 | 11 | 25 | 678 | 20 | 663 | 1.68e-139 | 424 |
| Msa0108880 | MtrunA17_Chr1g0186911 | 35.060 | 579 | 352 | 10 | 106 | 678 | 1 | 561 | 1.63e-119 | 369 |
| Msa0108880 | MtrunA17_Chr7g0226571 | 30.186 | 699 | 423 | 23 | 30 | 677 | 26 | 710 | 5.26e-87 | 288 |
| Msa0108880 | MtrunA17_Chr8g0381301 | 29.037 | 706 | 421 | 25 | 30 | 677 | 20 | 703 | 1.54e-75 | 257 |
| Msa0108880 | MtrunA17_Chr3g0116601 | 28.177 | 724 | 449 | 23 | 3 | 676 | 2 | 704 | 1.07e-71 | 246 |
| Msa0108880 | MtrunA17_Chr8g0364451 | 47.126 | 87 | 40 | 3 | 106 | 190 | 48 | 130 | 7.31e-14 | 70.1 |
| Msa0108880 | MtrunA17_Chr1g0186901 | 34.653 | 101 | 61 | 2 | 25 | 123 | 20 | 117 | 1.93e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0108880 | AT3G01680.1 | 27.716 | 718 | 444 | 23 | 27 | 683 | 34 | 737 | 5.82e-67 | 234 |
| Msa0108880 | AT3G01670.1 | 25.369 | 745 | 452 | 26 | 4 | 676 | 108 | 820 | 5.68e-50 | 187 |
| Msa0108880 | AT3G01670.2 | 25.202 | 742 | 457 | 24 | 4 | 676 | 132 | 844 | 1.42e-49 | 187 |
| Msa0108880 | AT1G67790.1 | 24.319 | 514 | 345 | 15 | 28 | 517 | 9 | 502 | 6.35e-28 | 120 |
Find 149 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAATCGTTCCTCGTTTC+TGG | 0.066845 | 1_3:+20545194 | Msa0108880:CDS |
| GTGTTTGTTTGGTTGGTTTC+TGG | 0.101255 | 1_3:+20545686 | Msa0108880:three_prime_UTR |
| CTCAAAAGTGGAACTGGTTT+TGG | 0.139446 | 1_3:+20544854 | Msa0108880:CDS |
| TTCCATTGTAAGCAAATTAA+AGG | 0.155216 | 1_3:+20543715 | Msa0108880:CDS |
| CATTAGAATATGGAAATTTC+TGG | 0.161510 | 1_3:+20543130 | Msa0108880:CDS |
| GCAAAGTCATGTGTCCATTT+TGG | 0.177728 | 1_3:-20545085 | None:intergenic |
| CATGTGTTGGTATTCATTTC+AGG | 0.222644 | 1_3:+20544457 | Msa0108880:CDS |
| GAGAGATATAATAACTTTCT+TGG | 0.228493 | 1_3:+20542085 | Msa0108880:five_prime_UTR |
| AGATTCCTGTTGCTGTTTAT+TGG | 0.243721 | 1_3:+20543370 | Msa0108880:CDS |
| AAATCATATGCATTGCATTA+TGG | 0.255922 | 1_3:-20544777 | None:intergenic |
| CAGAAATATGCTTCAGTTTA+CGG | 0.256894 | 1_3:-20542495 | None:intergenic |
| TCTATCCCTTGGCTGGAATA+AGG | 0.257305 | 1_3:+20544680 | Msa0108880:CDS |
| GAAGACAGACTTCCCTTATC+TGG | 0.274120 | 1_3:+20542457 | Msa0108880:CDS |
| GTGAATGTGAATCAGATTAA+AGG | 0.277979 | 1_3:+20545028 | Msa0108880:intron |
| AAAGTTATTATATCTCTCTT+TGG | 0.281682 | 1_3:-20542080 | None:intergenic |
| AGTCTTCCACAATGAAATTC+AGG | 0.283440 | 1_3:+20544015 | Msa0108880:CDS |
| GATTCCTGTTGCTGTTTATT+GGG | 0.286090 | 1_3:+20543371 | Msa0108880:CDS |
| ATCTCTCTTTGGAGCTACTA+TGG | 0.297473 | 1_3:-20542069 | None:intergenic |
| ATGGAGGAACAGACCCAAAA+TGG | 0.329313 | 1_3:+20545071 | Msa0108880:CDS |
| TTTGAATCAGGACAGTAAAT+AGG | 0.340556 | 1_3:-20545538 | None:intergenic |
| GACACATTCATCTTCATATA+TGG | 0.340751 | 1_3:+20545052 | Msa0108880:CDS |
| CAGGTGAGCTAGAAGATTAC+TGG | 0.342565 | 1_3:+20543936 | Msa0108880:intron |
| GTTCTTCCACAGTTTGAATC+AGG | 0.348453 | 1_3:-20545550 | None:intergenic |
| AGGTTAGCATCGAAGTGTTT+AGG | 0.358989 | 1_3:+20544428 | Msa0108880:intron |
| TTATCATCACTCCATGCTAA+TGG | 0.362851 | 1_3:-20542189 | None:intergenic |
| GGAATCATTTGTTGAATGTT+CGG | 0.363847 | 1_3:+20545707 | Msa0108880:three_prime_UTR |
| TGAATGTGAATCAGATTAAA+GGG | 0.366060 | 1_3:+20545029 | Msa0108880:intron |
| CAAATTCAGCTTTGTGAAGT+AGG | 0.370216 | 1_3:-20544615 | None:intergenic |
| GAAGAACCAAGAGAACTAAA+AGG | 0.372963 | 1_3:+20544538 | Msa0108880:CDS |
| TCTTGATGTGTTTGTTTGGT+TGG | 0.379201 | 1_3:+20545679 | Msa0108880:exon |
| TTGGAAAAGCTTTCAACAAA+AGG | 0.397341 | 1_3:+20543303 | Msa0108880:CDS |
| TATCATCACTCCATGCTAAT+GGG | 0.399622 | 1_3:-20542188 | None:intergenic |
| AGGGTCCAATCATCCACAAT+TGG | 0.400463 | 1_3:-20544595 | None:intergenic |
| CATTGCTGATTACAACAGTT+TGG | 0.400657 | 1_3:+20543242 | Msa0108880:CDS |
| CGACCGAGCAGTTTCACATT+TGG | 0.403560 | 1_3:-20545343 | None:intergenic |
| CTTACAAGGTCTTGGAGTCT+TGG | 0.407678 | 1_3:-20544898 | None:intergenic |
| CACTTACTCAAAAGTGGAAC+TGG | 0.410991 | 1_3:+20544848 | Msa0108880:CDS |
| TCATCATCTGTGGGACGAAA+AGG | 0.411574 | 1_3:-20544823 | None:intergenic |
| TTCTTGTAGTCCAGCGTAGA+TGG | 0.412320 | 1_3:-20544518 | None:intergenic |
| AATTTGTACTTACAAGGTCT+TGG | 0.416127 | 1_3:-20544906 | None:intergenic |
| CACCGGTGTGGACATGAGTT+AGG | 0.420531 | 1_3:-20542230 | None:intergenic |
| ATCGTTCCTCGTTTCTGGAT+TGG | 0.420969 | 1_3:+20545199 | Msa0108880:CDS |
| AAAACCTCAACAATTTCTGT+TGG | 0.423007 | 1_3:-20543983 | None:intergenic |
| GGGTTCAGAACAGGTAGAAT+TGG | 0.427233 | 1_3:-20544736 | None:intergenic |
| AAGGTCTTGATGTGTTTGTT+TGG | 0.438101 | 1_3:+20545675 | Msa0108880:exon |
| CACCACTTGGTGTTTGAACT+AGG | 0.444045 | 1_3:-20543155 | None:intergenic |
| AAGATTACTGGAGGCGTAAG+AGG | 0.445082 | 1_3:+20543948 | Msa0108880:CDS |
| ATAGCCCAATAAACAGCAAC+AGG | 0.445960 | 1_3:-20543375 | None:intergenic |
| GGATCCCAATTGTGGATGAT+TGG | 0.449147 | 1_3:+20544590 | Msa0108880:CDS |
| GAGTACTTCTATCCCTTGGC+TGG | 0.451475 | 1_3:+20544673 | Msa0108880:CDS |
| TGCATATTAGCACAAGCAAC+AGG | 0.456296 | 1_3:-20545484 | None:intergenic |
| TAGATGATGAGCACACTTCC+TGG | 0.460640 | 1_3:+20543012 | Msa0108880:intron |
| GCCTAACATGTCGTCTTCAA+TGG | 0.463271 | 1_3:+20542107 | Msa0108880:exon |
| CGCTGATAGTGTTGCATCCA+AGG | 0.468545 | 1_3:+20542317 | Msa0108880:CDS |
| TATTTAAAACAACCCATTCA+AGG | 0.472814 | 1_3:-20545827 | None:intergenic |
| AGCCTTTAATTTGCTTACAA+TGG | 0.473426 | 1_3:-20543717 | None:intergenic |
| CTACCTAGAGGGTTCAGAAC+AGG | 0.476347 | 1_3:-20544745 | None:intergenic |
| CTGTCTTCTACAAGACCTAC+AGG | 0.477249 | 1_3:-20542442 | None:intergenic |
| AAATTCAGCTTTGTGAAGTA+GGG | 0.482259 | 1_3:-20544614 | None:intergenic |
| AGGAGGCTCATAACCAGATA+AGG | 0.484803 | 1_3:-20542470 | None:intergenic |
| TGATGGCTTGAACAGACAAA+TGG | 0.485289 | 1_3:+20544051 | Msa0108880:CDS |
| CAAACAAGACCAGCCAGGTT+GGG | 0.490006 | 1_3:+20545303 | Msa0108880:CDS |
| ATGAGTCACTTACTCAAAAG+TGG | 0.491847 | 1_3:+20544842 | Msa0108880:CDS |
| TCTCGTCTCTTATGCTGTCT+AGG | 0.493672 | 1_3:-20544480 | None:intergenic |
| AAGAAGATTTCAAGATCTTG+TGG | 0.495575 | 1_3:+20544569 | Msa0108880:CDS |
| TATGGGATTTCAGCTGATCA+AGG | 0.497173 | 1_3:-20543068 | None:intergenic |
| ATCAGCTGAAATCCCATACA+TGG | 0.498650 | 1_3:+20543073 | Msa0108880:CDS |
| CATCATCTGTGGGACGAAAA+GGG | 0.499129 | 1_3:-20544822 | None:intergenic |
| ACATTACTTGCAAGTGAAGC+TGG | 0.499453 | 1_3:-20542132 | None:intergenic |
| ACAAGGAGCAGAAAGCATAT+AGG | 0.503383 | 1_3:+20543746 | Msa0108880:CDS |
| CCCATTCAAGGGCACACAAA+AGG | 0.505411 | 1_3:-20545815 | None:intergenic |
| GCCATTGAAGACGACATGTT+AGG | 0.506056 | 1_3:-20542108 | None:intergenic |
| AATTAAAGGCTCATCTTACA+AGG | 0.509783 | 1_3:+20543729 | Msa0108880:CDS |
| GGGTCCAATCATCCACAATT+GGG | 0.510095 | 1_3:-20544594 | None:intergenic |
| ATTTAAAACAACCCATTCAA+GGG | 0.515381 | 1_3:-20545826 | None:intergenic |
| GGAGGCTCATAACCAGATAA+GGG | 0.525657 | 1_3:-20542469 | None:intergenic |
| ACACCAAGTGGTGACTCACT+TGG | 0.527054 | 1_3:+20543165 | Msa0108880:CDS |
| GGTTGAGTACTTCTATCCCT+TGG | 0.529205 | 1_3:+20544669 | Msa0108880:CDS |
| CTACCTGTTCTGAACCCTCT+AGG | 0.529548 | 1_3:+20544742 | Msa0108880:CDS |
| ACTGAAGCATATTTCTGCCC+AGG | 0.531572 | 1_3:+20542501 | Msa0108880:CDS |
| CTGAAATCCCATACATGGGA+TGG | 0.532648 | 1_3:+20543078 | Msa0108880:CDS |
| ACAAAACCACCACTCTCAGC+AGG | 0.533265 | 1_3:-20545640 | None:intergenic |
| TATCAACCTTATTCCAGCCA+AGG | 0.535936 | 1_3:-20544686 | None:intergenic |
| TGCTTGTGCTAATATGCAGT+TGG | 0.535959 | 1_3:+20545489 | Msa0108880:CDS |
| ATGTGAGCATGGTGCTCACC+AGG | 0.537625 | 1_3:-20543030 | None:intergenic |
| GAGTTAGGTAAACGGTTTCG+AGG | 0.540103 | 1_3:-20542215 | None:intergenic |
| TTCCACATCGTACCTTTCAC+CGG | 0.543184 | 1_3:-20542247 | None:intergenic |
| TGGCAGACTGGGACTCCTGT+AGG | 0.544529 | 1_3:+20542427 | Msa0108880:intron |
| TTCAAGCCATCAAAGACAAG+GGG | 0.551538 | 1_3:-20544040 | None:intergenic |
| GTAATAGAGCATTTCCACTT+CGG | 0.551983 | 1_3:+20545160 | Msa0108880:CDS |
| TTAGTAGAACCCAACCTGGC+TGG | 0.552075 | 1_3:-20545312 | None:intergenic |
| TGCATAGCTTCAGACAAAGC+AGG | 0.554275 | 1_3:-20543345 | None:intergenic |
| TGTCTCAAACAAGACCAGCC+AGG | 0.555894 | 1_3:+20545298 | Msa0108880:CDS |
| GTGGACATGAGTTAGGTAAA+CGG | 0.556772 | 1_3:-20542223 | None:intergenic |
| CTTCCAAGTGAGTCACCACT+TGG | 0.558326 | 1_3:-20543168 | None:intergenic |
| TGTTGAGTGTATTACTGAGT+TGG | 0.559184 | 1_3:+20543284 | Msa0108880:CDS |
| ATCAACCTTATTCCAGCCAA+GGG | 0.563390 | 1_3:-20544685 | None:intergenic |
| GTGTCAGTTGTGTCAACAGA+TGG | 0.565418 | 1_3:+20545784 | Msa0108880:three_prime_UTR |
| AACACTATCAGCGACTGCAC+TGG | 0.566260 | 1_3:-20542307 | None:intergenic |
| CTCATGTCCACACCGGTGAA+AGG | 0.569357 | 1_3:+20542235 | Msa0108880:CDS |
| TAGCAATCGAGAAAATCAAA+AGG | 0.570446 | 1_3:+20545110 | Msa0108880:CDS |
| TCAAACAAGACCAGCCAGGT+TGG | 0.571127 | 1_3:+20545302 | Msa0108880:CDS |
| GTTAGCTACAAGTGTTGCCA+TGG | 0.571157 | 1_3:+20545589 | Msa0108880:CDS |
| TGCTTCAGTTTACGGATAGG+AGG | 0.575601 | 1_3:-20542487 | None:intergenic |
| AACTCCAACAGAAATTGTTG+AGG | 0.575818 | 1_3:+20543979 | Msa0108880:CDS |
| GTTTAGGAGGAAGCATGTGT+TGG | 0.578541 | 1_3:+20544444 | Msa0108880:CDS |
| AGATTACTGGAGGCGTAAGA+GGG | 0.582113 | 1_3:+20543949 | Msa0108880:CDS |
| ATATGCTTCAGTTTACGGAT+AGG | 0.583335 | 1_3:-20542490 | None:intergenic |
| AAACTTCAAACCCATTAGCA+TGG | 0.583737 | 1_3:+20542178 | Msa0108880:CDS |
| GCTCCTCCTGCTGAGAGTGG+TGG | 0.584351 | 1_3:+20545634 | Msa0108880:CDS |
| AATGTGAAACTGCTCGGTCG+CGG | 0.586302 | 1_3:+20545346 | Msa0108880:CDS |
| ATAGGATCAAGAATATCAGA+AGG | 0.591889 | 1_3:-20545520 | None:intergenic |
| GATCTTGTGGATCCCAATTG+TGG | 0.592782 | 1_3:+20544582 | Msa0108880:CDS |
| AGTAAGTGACTCATCATCTG+TGG | 0.597034 | 1_3:-20544833 | None:intergenic |
| TACTGTCCTGATTCAAACTG+TGG | 0.599493 | 1_3:+20545544 | Msa0108880:CDS |
| CTTCTTCAATCCATCTACGC+TGG | 0.599801 | 1_3:+20544508 | Msa0108880:CDS |
| TTAGCATCGAAGTGTTTAGG+AGG | 0.599845 | 1_3:+20544431 | Msa0108880:CDS |
| TTCAAACTGTGGAAGAACAA+TGG | 0.600916 | 1_3:+20545555 | Msa0108880:CDS |
| GCTAGAAATGCCATGGTATG+TGG | 0.603153 | 1_3:+20544648 | Msa0108880:CDS |
| GGACCAAATGTGAAACTGCT+CGG | 0.603872 | 1_3:+20545340 | Msa0108880:CDS |
| GGTTCACAATCCTACCTAGA+GGG | 0.606256 | 1_3:-20544756 | None:intergenic |
| CTGTTCTGAACCCTCTAGGT+AGG | 0.607740 | 1_3:+20544746 | Msa0108880:CDS |
| CAAACTGTTGTAATCAGCAA+TGG | 0.608903 | 1_3:-20543241 | None:intergenic |
| ACTTGAAGCTAGAAATGCCA+TGG | 0.609318 | 1_3:+20544641 | Msa0108880:CDS |
| ACATTGTTGTCATGTGAGCA+TGG | 0.611775 | 1_3:-20543041 | None:intergenic |
| GTGTCAGCTTATAGCCAACA+AGG | 0.616261 | 1_3:+20542153 | Msa0108880:CDS |
| TGTTCAAGCCATCAAAGACA+AGG | 0.620643 | 1_3:-20544042 | None:intergenic |
| TTGCTTAGTAGAACCCAACC+TGG | 0.620916 | 1_3:-20545316 | None:intergenic |
| GAAGCTCCTCCTGCTGAGAG+TGG | 0.621719 | 1_3:+20545631 | Msa0108880:CDS |
| ACATTCATCTTCATATATGG+AGG | 0.630288 | 1_3:+20545055 | Msa0108880:CDS |
| TAGGATCAAGAATATCAGAA+GGG | 0.639927 | 1_3:-20545519 | None:intergenic |
| CATCGTACCTTTCACCGGTG+TGG | 0.641644 | 1_3:-20542242 | None:intergenic |
| GTTCAAGCCATCAAAGACAA+GGG | 0.644512 | 1_3:-20544041 | None:intergenic |
| GTAAGTGACTCATCATCTGT+GGG | 0.646861 | 1_3:-20544832 | None:intergenic |
| CGTTCTCGTGAGTATGACCA+TGG | 0.648414 | 1_3:-20545606 | None:intergenic |
| GGTTGGGTTCTACTAAGCAA+AGG | 0.652919 | 1_3:+20545319 | Msa0108880:CDS |
| AAGTACTCAACCACATACCA+TGG | 0.655414 | 1_3:-20544658 | None:intergenic |
| CACCGGTGAAAGGTACGATG+TGG | 0.656165 | 1_3:+20542245 | Msa0108880:CDS |
| TGTCAGTTGTGTCAACAGAT+GGG | 0.656192 | 1_3:+20545785 | Msa0108880:three_prime_UTR |
| CACCTAGTTCAAACACCAAG+TGG | 0.658165 | 1_3:+20543153 | Msa0108880:CDS |
| TGGTTCACAATCCTACCTAG+AGG | 0.663403 | 1_3:-20544757 | None:intergenic |
| AAACCACCACTCTCAGCAGG+AGG | 0.667205 | 1_3:-20545637 | None:intergenic |
| GAATGTGAATCAGATTAAAG+GGG | 0.681348 | 1_3:+20545030 | Msa0108880:intron |
| TACCTAACTCATGTCCACAC+CGG | 0.681654 | 1_3:+20542228 | Msa0108880:CDS |
| TCAGCTGAAATCCCATACAT+GGG | 0.682027 | 1_3:+20543074 | Msa0108880:CDS |
| GTGAGCTAGAAGATTACTGG+AGG | 0.704760 | 1_3:+20543939 | Msa0108880:CDS |
| TCAAATGTATGCAACTGCTG+TGG | 0.727594 | 1_3:+20545372 | Msa0108880:CDS |
| TCTATGCCAATCCAGAAACG+AGG | 0.741708 | 1_3:-20545205 | None:intergenic |
| TCAAGCCATCAAAGACAAGG+GGG | 0.746571 | 1_3:-20544039 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAATTAATGATATTAG+TGG | + | chr1_3:20543552-20543571 | Msa0108880:intron | 10.0% |
| !!! | AATTTTTAATGCATATTATT+TGG | + | chr1_3:20543838-20543857 | Msa0108880:intron | 10.0% |
| !! | CATTAATTCACAATTATATT+TGG | - | chr1_3:20542383-20542402 | None:intergenic | 15.0% |
| !! | AAAATATTGTATCATTTGTT+TGG | + | chr1_3:20542407-20542426 | Msa0108880:intron | 15.0% |
| !! | AATTGATATAAAAATTACCT+GGG | - | chr1_3:20542521-20542540 | None:intergenic | 15.0% |
| !! | AAATTGATATAAAAATTACC+TGG | - | chr1_3:20542522-20542541 | None:intergenic | 15.0% |
| !! | ATAAAATAAAATGTACATGT+TGG | - | chr1_3:20542633-20542652 | None:intergenic | 15.0% |
| !! | TAAAAGGAACATATTATTAT+GGG | + | chr1_3:20542880-20542899 | Msa0108880:intron | 15.0% |
| !! | TATCATTAATAGTTATCATT+AGG | - | chr1_3:20544121-20544140 | None:intergenic | 15.0% |
| !! | TATTTAGTGACAAAATATAT+TGG | - | chr1_3:20544281-20544300 | None:intergenic | 15.0% |
| !!! | ATTAATACTATTTTTGCTAA+AGG | + | chr1_3:20544937-20544956 | Msa0108880:intron | 15.0% |
| !!! | TTAATACTATTTTTGCTAAA+GGG | + | chr1_3:20544938-20544957 | Msa0108880:intron | 15.0% |
| !!! | TTTTTCAATGAATATTTGTT+TGG | + | chr1_3:20544984-20545003 | Msa0108880:intron | 15.0% |
| !! | AAAGTTATTATATCTCTCTT+TGG | - | chr1_3:20542083-20542102 | None:intergenic | 20.0% |
| !! | TAAAATTCAGATCATTGTAT+AGG | + | chr1_3:20542560-20542579 | Msa0108880:intron | 20.0% |
| !! | GCAAAAATGTATATGTATTT+AGG | - | chr1_3:20542720-20542739 | None:intergenic | 20.0% |
| !! | TGCTTATATATTTATTCTAG+AGG | + | chr1_3:20542737-20542756 | Msa0108880:intron | 20.0% |
| !! | CTAAAAGGAACATATTATTA+TGG | + | chr1_3:20542879-20542898 | Msa0108880:intron | 20.0% |
| !!! | TCTTTATTTGCTTTTTTTAG+TGG | + | chr1_3:20543800-20543819 | Msa0108880:intron | 20.0% |
| !!! | CTTTATTTGCTTTTTTTAGT+GGG | + | chr1_3:20543801-20543820 | Msa0108880:intron | 20.0% |
| !! | TTATAAAGCATACAACATTA+TGG | + | chr1_3:20544324-20544343 | Msa0108880:intron | 20.0% |
| !! | AAATGATTTCACAAAGTAAA+CGG | - | chr1_3:20544351-20544370 | None:intergenic | 20.0% |
| !!! | AATGCATATGATTTTTGTTT+GGG | + | chr1_3:20544786-20544805 | Msa0108880:CDS | 20.0% |
| ! | GAGAGATATAATAACTTTCT+TGG | + | chr1_3:20542085-20542104 | Msa0108880:five_prime_UTR | 25.0% |
| ! | GTAATCTATGAGAAACTAAA+AGG | + | chr1_3:20542864-20542883 | Msa0108880:intron | 25.0% |
| ! | CATTAGAATATGGAAATTTC+TGG | + | chr1_3:20543130-20543149 | Msa0108880:CDS | 25.0% |
| !! | AATCATCTTGATCTTCTTTT+TGG | + | chr1_3:20543420-20543439 | Msa0108880:CDS | 25.0% |
| !!! | TGTTTTCATGAACTTTTTTC+AGG | + | chr1_3:20543651-20543670 | Msa0108880:intron | 25.0% |
| !!! | GTTTTCATGAACTTTTTTCA+GGG | + | chr1_3:20543652-20543671 | Msa0108880:intron | 25.0% |
| ! | TTCCATTGTAAGCAAATTAA+AGG | + | chr1_3:20543715-20543734 | Msa0108880:CDS | 25.0% |
| ! | GCACACACATAAATTATAAT+CGG | - | chr1_3:20543910-20543929 | None:intergenic | 25.0% |
| !! | GGTTAGTTAATATTCAAATG+TGG | + | chr1_3:20544072-20544091 | Msa0108880:intron | 25.0% |
| ! | TTGAAAATCAGTAGCAAAAT+CGG | + | chr1_3:20544243-20544262 | Msa0108880:intron | 25.0% |
| ! | AAATCATATGCATTGCATTA+TGG | - | chr1_3:20544780-20544799 | None:intergenic | 25.0% |
| !! | CAATGCATATGATTTTTGTT+TGG | + | chr1_3:20544785-20544804 | Msa0108880:CDS | 25.0% |
| !!! | ATGCATATGATTTTTGTTTG+GGG | + | chr1_3:20544787-20544806 | Msa0108880:CDS | 25.0% |
| ! | TTGCAAAATTTGTACTTACA+AGG | - | chr1_3:20544915-20544934 | None:intergenic | 25.0% |
| ! | TGAATGTGAATCAGATTAAA+GGG | + | chr1_3:20545029-20545048 | Msa0108880:intron | 25.0% |
| !!! | TGTTTTGTTGTTGTTTTTGT+TGG | + | chr1_3:20545752-20545771 | Msa0108880:three_prime_UTR | 25.0% |
| !! | ATTTAAAACAACCCATTCAA+GGG | - | chr1_3:20545829-20545848 | None:intergenic | 25.0% |
| !! | TATTTAAAACAACCCATTCA+AGG | - | chr1_3:20545830-20545849 | None:intergenic | 25.0% |
| !!! | GAATGGGTTGTTTTAAATAA+TGG | + | chr1_3:20545831-20545850 | Msa0108880:three_prime_UTR | 25.0% |
| CAGAAATATGCTTCAGTTTA+CGG | - | chr1_3:20542498-20542517 | None:intergenic | 30.0% | |
| CCAAATACATGTATACAAGT+TGG | - | chr1_3:20542687-20542706 | None:intergenic | 30.0% | |
| CCAACTTGTATACATGTATT+TGG | + | chr1_3:20542684-20542703 | Msa0108880:intron | 30.0% | |
| TTCTCATAGATTACTTCCAA+CGG | - | chr1_3:20542858-20542877 | None:intergenic | 30.0% | |
| ! | GCTGCATTTTCATTAGAATA+TGG | + | chr1_3:20543120-20543139 | Msa0108880:CDS | 30.0% |
| TTGGAAAAGCTTTCAACAAA+AGG | + | chr1_3:20543303-20543322 | Msa0108880:CDS | 30.0% | |
| AGTTACGAAAAGATATTCCA+AGG | - | chr1_3:20543467-20543486 | None:intergenic | 30.0% | |
| AATGATATTAGTGGTCAAAG+TGG | + | chr1_3:20543561-20543580 | Msa0108880:intron | 30.0% | |
| ! | TGGTGTATTGACATATAGTA+AGG | + | chr1_3:20543581-20543600 | Msa0108880:intron | 30.0% |
| !! | GGTTAATGTGTCGATTAATA+TGG | + | chr1_3:20543602-20543621 | Msa0108880:intron | 30.0% |
| ACACTCTCATGAATATTACT+CGG | - | chr1_3:20543634-20543653 | None:intergenic | 30.0% | |
| !! | AGCCTTTAATTTGCTTACAA+TGG | - | chr1_3:20543720-20543739 | None:intergenic | 30.0% |
| AATTAAAGGCTCATCTTACA+AGG | + | chr1_3:20543729-20543748 | Msa0108880:CDS | 30.0% | |
| AAAACCTCAACAATTTCTGT+TGG | - | chr1_3:20543986-20544005 | None:intergenic | 30.0% | |
| !! | AGAAATTGTTGAGGTTTTGA+AGG | + | chr1_3:20543988-20544007 | Msa0108880:CDS | 30.0% |
| AAGAAGATTTCAAGATCTTG+TGG | + | chr1_3:20544569-20544588 | Msa0108880:CDS | 30.0% | |
| ! | AAATTCAGCTTTGTGAAGTA+GGG | - | chr1_3:20544617-20544636 | None:intergenic | 30.0% |
| AATTTGTACTTACAAGGTCT+TGG | - | chr1_3:20544909-20544928 | None:intergenic | 30.0% | |
| GTGAATGTGAATCAGATTAA+AGG | + | chr1_3:20545028-20545047 | Msa0108880:intron | 30.0% | |
| GAATGTGAATCAGATTAAAG+GGG | + | chr1_3:20545030-20545049 | Msa0108880:intron | 30.0% | |
| GACACATTCATCTTCATATA+TGG | + | chr1_3:20545052-20545071 | Msa0108880:CDS | 30.0% | |
| ACATTCATCTTCATATATGG+AGG | + | chr1_3:20545055-20545074 | Msa0108880:CDS | 30.0% | |
| TAGCAATCGAGAAAATCAAA+AGG | + | chr1_3:20545110-20545129 | Msa0108880:CDS | 30.0% | |
| !!! | CTTTTGATTTCATCGATTGT+TGG | - | chr1_3:20545271-20545290 | None:intergenic | 30.0% |
| !!! | TGGTTTTGATGTTGCTTTTA+AGG | + | chr1_3:20545432-20545451 | Msa0108880:CDS | 30.0% |
| !!! | CTTTTAAGGAGTATTATGAG+AGG | + | chr1_3:20545446-20545465 | Msa0108880:CDS | 30.0% |
| TAGGATCAAGAATATCAGAA+GGG | - | chr1_3:20545522-20545541 | None:intergenic | 30.0% | |
| ATAGGATCAAGAATATCAGA+AGG | - | chr1_3:20545523-20545542 | None:intergenic | 30.0% | |
| TTTGAATCAGGACAGTAAAT+AGG | - | chr1_3:20545541-20545560 | None:intergenic | 30.0% | |
| !! | GTTTTGTTCAGATTGAGAAA+AGG | + | chr1_3:20545656-20545675 | Msa0108880:CDS | 30.0% |
| ! | GGAATCATTTGTTGAATGTT+CGG | + | chr1_3:20545707-20545726 | Msa0108880:three_prime_UTR | 30.0% |
| !! | GGTTTGAAGTTTTTCCTTGT+TGG | - | chr1_3:20542170-20542189 | None:intergenic | 35.0% |
| AAACTTCAAACCCATTAGCA+TGG | + | chr1_3:20542178-20542197 | Msa0108880:CDS | 35.0% | |
| TATCATCACTCCATGCTAAT+GGG | - | chr1_3:20542191-20542210 | None:intergenic | 35.0% | |
| TTATCATCACTCCATGCTAA+TGG | - | chr1_3:20542192-20542211 | None:intergenic | 35.0% | |
| GTTGTGAGAAATGTATACCT+TGG | - | chr1_3:20542337-20542356 | None:intergenic | 35.0% | |
| TATCATTTGTTTGGCAGACT+GGG | + | chr1_3:20542416-20542435 | Msa0108880:intron | 35.0% | |
| ATATGCTTCAGTTTACGGAT+AGG | - | chr1_3:20542493-20542512 | None:intergenic | 35.0% | |
| TCTAACCAAGACTTGAATCT+CGG | + | chr1_3:20542782-20542801 | Msa0108880:intron | 35.0% | |
| ! | TCTTTTCGACACTTTGAACA+CGG | - | chr1_3:20543212-20543231 | None:intergenic | 35.0% |
| CAAACTGTTGTAATCAGCAA+TGG | - | chr1_3:20543244-20543263 | None:intergenic | 35.0% | |
| ! | CATTGCTGATTACAACAGTT+TGG | + | chr1_3:20543242-20543261 | Msa0108880:CDS | 35.0% |
| TGTTGAGTGTATTACTGAGT+TGG | + | chr1_3:20543284-20543303 | Msa0108880:CDS | 35.0% | |
| !! | AGATTCCTGTTGCTGTTTAT+TGG | + | chr1_3:20543370-20543389 | Msa0108880:CDS | 35.0% |
| !! | GATTCCTGTTGCTGTTTATT+GGG | + | chr1_3:20543371-20543390 | Msa0108880:CDS | 35.0% |
| TCGTAAGTACTTTGATTCCT+TGG | + | chr1_3:20543447-20543466 | Msa0108880:intron | 35.0% | |
| !!! | GAACTTTTTTCAGGGATGAT+AGG | + | chr1_3:20543660-20543679 | Msa0108880:intron | 35.0% |
| TTTATGTGTGTGCATATTGC+AGG | + | chr1_3:20543917-20543936 | Msa0108880:intron | 35.0% | |
| AACTCCAACAGAAATTGTTG+AGG | + | chr1_3:20543979-20543998 | Msa0108880:CDS | 35.0% | |
| AGTCTTCCACAATGAAATTC+AGG | + | chr1_3:20544015-20544034 | Msa0108880:CDS | 35.0% | |
| ATTGTTAGCGACCAATATAG+CGG | - | chr1_3:20544156-20544175 | None:intergenic | 35.0% | |
| ATTAACGCGGAAATTAGAGA+CGG | - | chr1_3:20544403-20544422 | None:intergenic | 35.0% | |
| AATTTCCGCGTTAATTCAAC+AGG | + | chr1_3:20544408-20544427 | Msa0108880:intron | 35.0% | |
| ! | CATGTGTTGGTATTCATTTC+AGG | + | chr1_3:20544457-20544476 | Msa0108880:CDS | 35.0% |
| GAAGAACCAAGAGAACTAAA+AGG | + | chr1_3:20544538-20544557 | Msa0108880:CDS | 35.0% | |
| !!! | CTGTATCCTTTTAGTTCTCT+TGG | - | chr1_3:20544547-20544566 | None:intergenic | 35.0% |
| ! | CAAATTCAGCTTTGTGAAGT+AGG | - | chr1_3:20544618-20544637 | None:intergenic | 35.0% |
| ATGAGTCACTTACTCAAAAG+TGG | + | chr1_3:20544842-20544861 | Msa0108880:CDS | 35.0% | |
| !!! | TCAAAAGTGGAACTGGTTTT+GGG | + | chr1_3:20544855-20544874 | Msa0108880:CDS | 35.0% |
| ! | CAAAGTCATGTGTCCATTTT+GGG | - | chr1_3:20545087-20545106 | None:intergenic | 35.0% |
| ! | TATTACTGCATCAGCTTTTC+GGG | - | chr1_3:20545146-20545165 | None:intergenic | 35.0% |
| ! | CTATTACTGCATCAGCTTTT+CGG | - | chr1_3:20545147-20545166 | None:intergenic | 35.0% |
| ! | GTAATAGAGCATTTCCACTT+CGG | + | chr1_3:20545160-20545179 | Msa0108880:CDS | 35.0% |
| ! | TTTTGTCTTCTTTTCCGAAG+TGG | - | chr1_3:20545177-20545196 | None:intergenic | 35.0% |
| TTCAAACTGTGGAAGAACAA+TGG | + | chr1_3:20545555-20545574 | Msa0108880:CDS | 35.0% | |
| AAGGTCTTGATGTGTTTGTT+TGG | + | chr1_3:20545675-20545694 | Msa0108880:exon | 35.0% | |
| TCTTGATGTGTTTGTTTGGT+TGG | + | chr1_3:20545679-20545698 | Msa0108880:exon | 35.0% | |
| !! | ATCTCTCTTTGGAGCTACTA+TGG | - | chr1_3:20542072-20542091 | None:intergenic | 40.0% |
| ACATTACTTGCAAGTGAAGC+TGG | - | chr1_3:20542135-20542154 | None:intergenic | 40.0% | |
| GTGGACATGAGTTAGGTAAA+CGG | - | chr1_3:20542226-20542245 | None:intergenic | 40.0% | |
| GTATCATTTGTTTGGCAGAC+TGG | + | chr1_3:20542415-20542434 | Msa0108880:intron | 40.0% | |
| TTTAGCCGAGATTCAAGTCT+TGG | - | chr1_3:20542790-20542809 | None:intergenic | 40.0% | |
| AGACTTGAATCTCGGCTAAA+AGG | + | chr1_3:20542790-20542809 | Msa0108880:intron | 40.0% | |
| TGCAATAAGATTACCTCCGT+TGG | + | chr1_3:20542839-20542858 | Msa0108880:intron | 40.0% | |
| TCATAGATTACTTCCAACGG+AGG | - | chr1_3:20542855-20542874 | None:intergenic | 40.0% | |
| ACATTGTTGTCATGTGAGCA+TGG | - | chr1_3:20543044-20543063 | None:intergenic | 40.0% | |
| TATGGGATTTCAGCTGATCA+AGG | - | chr1_3:20543071-20543090 | None:intergenic | 40.0% | |
| ATCAGCTGAAATCCCATACA+TGG | + | chr1_3:20543073-20543092 | Msa0108880:CDS | 40.0% | |
| TCAGCTGAAATCCCATACAT+GGG | + | chr1_3:20543074-20543093 | Msa0108880:CDS | 40.0% | |
| ! | TGCTTTTCCATCCCATGTAT+GGG | - | chr1_3:20543088-20543107 | None:intergenic | 40.0% |
| !! | TTGCTTTTCCATCCCATGTA+TGG | - | chr1_3:20543089-20543108 | None:intergenic | 40.0% |
| ATAGCCCAATAAACAGCAAC+AGG | - | chr1_3:20543378-20543397 | None:intergenic | 40.0% | |
| ! | ACAAGGAGCAGAAAGCATAT+AGG | + | chr1_3:20543746-20543765 | Msa0108880:CDS | 40.0% |
| TTCAAGCCATCAAAGACAAG+GGG | - | chr1_3:20544043-20544062 | None:intergenic | 40.0% | |
| GTTCAAGCCATCAAAGACAA+GGG | - | chr1_3:20544044-20544063 | None:intergenic | 40.0% | |
| TGTTCAAGCCATCAAAGACA+AGG | - | chr1_3:20544045-20544064 | None:intergenic | 40.0% | |
| TGATGGCTTGAACAGACAAA+TGG | + | chr1_3:20544051-20544070 | Msa0108880:CDS | 40.0% | |
| GACTGAATTGTCCGCTATAT+TGG | + | chr1_3:20544142-20544161 | Msa0108880:intron | 40.0% | |
| TAGCAAAATCGGTTGCTAGA+GGG | + | chr1_3:20544254-20544273 | Msa0108880:intron | 40.0% | |
| GCTAACCTGTTGAATTAACG+CGG | - | chr1_3:20544416-20544435 | None:intergenic | 40.0% | |
| ! | AGGTTAGCATCGAAGTGTTT+AGG | + | chr1_3:20544428-20544447 | Msa0108880:intron | 40.0% |
| ! | TTAGCATCGAAGTGTTTAGG+AGG | + | chr1_3:20544431-20544450 | Msa0108880:CDS | 40.0% |
| ACTTGAAGCTAGAAATGCCA+TGG | + | chr1_3:20544641-20544660 | Msa0108880:CDS | 40.0% | |
| AAGTACTCAACCACATACCA+TGG | - | chr1_3:20544661-20544680 | None:intergenic | 40.0% | |
| ATCAACCTTATTCCAGCCAA+GGG | - | chr1_3:20544688-20544707 | None:intergenic | 40.0% | |
| TATCAACCTTATTCCAGCCA+AGG | - | chr1_3:20544689-20544708 | None:intergenic | 40.0% | |
| GTAAGTGACTCATCATCTGT+GGG | - | chr1_3:20544835-20544854 | None:intergenic | 40.0% | |
| AGTAAGTGACTCATCATCTG+TGG | - | chr1_3:20544836-20544855 | None:intergenic | 40.0% | |
| CACTTACTCAAAAGTGGAAC+TGG | + | chr1_3:20544848-20544867 | Msa0108880:CDS | 40.0% | |
| !! | CTCAAAAGTGGAACTGGTTT+TGG | + | chr1_3:20544854-20544873 | Msa0108880:CDS | 40.0% |
| !! | GTTTTGGGCTGAAATGAAGA+AGG | + | chr1_3:20544870-20544889 | Msa0108880:CDS | 40.0% |
| ! | GCAAAGTCATGTGTCCATTT+TGG | - | chr1_3:20545088-20545107 | None:intergenic | 40.0% |
| AAAGAATCGTTCCTCGTTTC+TGG | + | chr1_3:20545194-20545213 | Msa0108880:CDS | 40.0% | |
| TCAAATGTATGCAACTGCTG+TGG | + | chr1_3:20545372-20545391 | Msa0108880:CDS | 40.0% | |
| !!! | CTGCTGTGGATTTTGAGATA+TGG | + | chr1_3:20545386-20545405 | Msa0108880:CDS | 40.0% |
| !! | GAAAAAGTGCTTGAGAAAGC+TGG | + | chr1_3:20545412-20545431 | Msa0108880:CDS | 40.0% |
| TGCATATTAGCACAAGCAAC+AGG | - | chr1_3:20545487-20545506 | None:intergenic | 40.0% | |
| TGCTTGTGCTAATATGCAGT+TGG | + | chr1_3:20545489-20545508 | Msa0108880:CDS | 40.0% | |
| TACTGTCCTGATTCAAACTG+TGG | + | chr1_3:20545544-20545563 | Msa0108880:CDS | 40.0% | |
| GTTCTTCCACAGTTTGAATC+AGG | - | chr1_3:20545553-20545572 | None:intergenic | 40.0% | |
| !! | GTGTTTGTTTGGTTGGTTTC+TGG | + | chr1_3:20545686-20545705 | Msa0108880:three_prime_UTR | 40.0% |
| TGTCAGTTGTGTCAACAGAT+GGG | + | chr1_3:20545785-20545804 | Msa0108880:three_prime_UTR | 40.0% | |
| GCCTAACATGTCGTCTTCAA+TGG | + | chr1_3:20542107-20542126 | Msa0108880:exon | 45.0% | |
| GCCATTGAAGACGACATGTT+AGG | - | chr1_3:20542111-20542130 | None:intergenic | 45.0% | |
| GTGTCAGCTTATAGCCAACA+AGG | + | chr1_3:20542153-20542172 | Msa0108880:CDS | 45.0% | |
| GAGTTAGGTAAACGGTTTCG+AGG | - | chr1_3:20542218-20542237 | None:intergenic | 45.0% | |
| TACCTAACTCATGTCCACAC+CGG | + | chr1_3:20542228-20542247 | Msa0108880:CDS | 45.0% | |
| TTCCACATCGTACCTTTCAC+CGG | - | chr1_3:20542250-20542269 | None:intergenic | 45.0% | |
| CTGTCTTCTACAAGACCTAC+AGG | - | chr1_3:20542445-20542464 | None:intergenic | 45.0% | |
| GAAGACAGACTTCCCTTATC+TGG | + | chr1_3:20542457-20542476 | Msa0108880:CDS | 45.0% | |
| GGAGGCTCATAACCAGATAA+GGG | - | chr1_3:20542472-20542491 | None:intergenic | 45.0% | |
| AGGAGGCTCATAACCAGATA+AGG | - | chr1_3:20542473-20542492 | None:intergenic | 45.0% | |
| TGCTTCAGTTTACGGATAGG+AGG | - | chr1_3:20542490-20542509 | None:intergenic | 45.0% | |
| ! | ACTGAAGCATATTTCTGCCC+AGG | + | chr1_3:20542501-20542520 | Msa0108880:CDS | 45.0% |
| TAGATGATGAGCACACTTCC+TGG | + | chr1_3:20543012-20543031 | Msa0108880:intron | 45.0% | |
| CTGAAATCCCATACATGGGA+TGG | + | chr1_3:20543078-20543097 | Msa0108880:CDS | 45.0% | |
| CACCTAGTTCAAACACCAAG+TGG | + | chr1_3:20543153-20543172 | Msa0108880:CDS | 45.0% | |
| !! | CACCACTTGGTGTTTGAACT+AGG | - | chr1_3:20543158-20543177 | None:intergenic | 45.0% |
| TGCATAGCTTCAGACAAAGC+AGG | - | chr1_3:20543348-20543367 | None:intergenic | 45.0% | |
| CAGGTGAGCTAGAAGATTAC+TGG | + | chr1_3:20543936-20543955 | Msa0108880:intron | 45.0% | |
| GTGAGCTAGAAGATTACTGG+AGG | + | chr1_3:20543939-20543958 | Msa0108880:CDS | 45.0% | |
| ! | AAGATTACTGGAGGCGTAAG+AGG | + | chr1_3:20543948-20543967 | Msa0108880:CDS | 45.0% |
| ! | AGATTACTGGAGGCGTAAGA+GGG | + | chr1_3:20543949-20543968 | Msa0108880:CDS | 45.0% |
| TCAAGCCATCAAAGACAAGG+GGG | - | chr1_3:20544042-20544061 | None:intergenic | 45.0% | |
| GTAGCAAAATCGGTTGCTAG+AGG | + | chr1_3:20544253-20544272 | Msa0108880:intron | 45.0% | |
| ! | GTTTAGGAGGAAGCATGTGT+TGG | + | chr1_3:20544444-20544463 | Msa0108880:CDS | 45.0% |
| TCTCGTCTCTTATGCTGTCT+AGG | - | chr1_3:20544483-20544502 | None:intergenic | 45.0% | |
| CTTCTTCAATCCATCTACGC+TGG | + | chr1_3:20544508-20544527 | Msa0108880:CDS | 45.0% | |
| TTCTTGTAGTCCAGCGTAGA+TGG | - | chr1_3:20544521-20544540 | None:intergenic | 45.0% | |
| GATCTTGTGGATCCCAATTG+TGG | + | chr1_3:20544582-20544601 | Msa0108880:CDS | 45.0% | |
| GGATCCCAATTGTGGATGAT+TGG | + | chr1_3:20544590-20544609 | Msa0108880:CDS | 45.0% | |
| GGGTCCAATCATCCACAATT+GGG | - | chr1_3:20544597-20544616 | None:intergenic | 45.0% | |
| AGGGTCCAATCATCCACAAT+TGG | - | chr1_3:20544598-20544617 | None:intergenic | 45.0% | |
| GCTAGAAATGCCATGGTATG+TGG | + | chr1_3:20544648-20544667 | Msa0108880:CDS | 45.0% | |
| GGTTGAGTACTTCTATCCCT+TGG | + | chr1_3:20544669-20544688 | Msa0108880:CDS | 45.0% | |
| TCTATCCCTTGGCTGGAATA+AGG | + | chr1_3:20544680-20544699 | Msa0108880:CDS | 45.0% | |
| GGGTTCAGAACAGGTAGAAT+TGG | - | chr1_3:20544739-20544758 | None:intergenic | 45.0% | |
| GGTTCACAATCCTACCTAGA+GGG | - | chr1_3:20544759-20544778 | None:intergenic | 45.0% | |
| TGGTTCACAATCCTACCTAG+AGG | - | chr1_3:20544760-20544779 | None:intergenic | 45.0% | |
| CATCATCTGTGGGACGAAAA+GGG | - | chr1_3:20544825-20544844 | None:intergenic | 45.0% | |
| TCATCATCTGTGGGACGAAA+AGG | - | chr1_3:20544826-20544845 | None:intergenic | 45.0% | |
| CTTACAAGGTCTTGGAGTCT+TGG | - | chr1_3:20544901-20544920 | None:intergenic | 45.0% | |
| ATGGAGGAACAGACCCAAAA+TGG | + | chr1_3:20545071-20545090 | Msa0108880:CDS | 45.0% | |
| ! | ATCGTTCCTCGTTTCTGGAT+TGG | + | chr1_3:20545199-20545218 | Msa0108880:CDS | 45.0% |
| TCTATGCCAATCCAGAAACG+AGG | - | chr1_3:20545208-20545227 | None:intergenic | 45.0% | |
| TTGCTTAGTAGAACCCAACC+TGG | - | chr1_3:20545319-20545338 | None:intergenic | 45.0% | |
| GGTTGGGTTCTACTAAGCAA+AGG | + | chr1_3:20545319-20545338 | Msa0108880:CDS | 45.0% | |
| GGACCAAATGTGAAACTGCT+CGG | + | chr1_3:20545340-20545359 | Msa0108880:CDS | 45.0% | |
| ! | GTTAGCTACAAGTGTTGCCA+TGG | + | chr1_3:20545589-20545608 | Msa0108880:CDS | 45.0% |
| GTGTCAGTTGTGTCAACAGA+TGG | + | chr1_3:20545784-20545803 | Msa0108880:three_prime_UTR | 45.0% | |
| ! | CCTTTTGTGTGCCCTTGAAT+GGG | + | chr1_3:20545815-20545834 | Msa0108880:three_prime_UTR | 45.0% |
| !! | AAAAATTAAAAAATTAACTT+AGG | + | chr1_3:20542930-20542949 | Msa0108880:intron | 5.0% |
| !! | TAATATCATTAATTATATAT+CGG | - | chr1_3:20543551-20543570 | None:intergenic | 5.0% |
| AACACTATCAGCGACTGCAC+TGG | - | chr1_3:20542310-20542329 | None:intergenic | 50.0% | |
| ! | CGCTGATAGTGTTGCATCCA+AGG | + | chr1_3:20542317-20542336 | Msa0108880:CDS | 50.0% |
| ACACCAAGTGGTGACTCACT+TGG | + | chr1_3:20543165-20543184 | Msa0108880:CDS | 50.0% | |
| CTTCCAAGTGAGTCACCACT+TGG | - | chr1_3:20543171-20543190 | None:intergenic | 50.0% | |
| GGGGGTCCTGAATTTCATTG+TGG | - | chr1_3:20544024-20544043 | None:intergenic | 50.0% | |
| GAGTACTTCTATCCCTTGGC+TGG | + | chr1_3:20544673-20544692 | Msa0108880:CDS | 50.0% | |
| ! | CTACCTGTTCTGAACCCTCT+AGG | + | chr1_3:20544742-20544761 | Msa0108880:CDS | 50.0% |
| CTACCTAGAGGGTTCAGAAC+AGG | - | chr1_3:20544748-20544767 | None:intergenic | 50.0% | |
| ! | CTGTTCTGAACCCTCTAGGT+AGG | + | chr1_3:20544746-20544765 | Msa0108880:CDS | 50.0% |
| TGTCTCAAACAAGACCAGCC+AGG | + | chr1_3:20545298-20545317 | Msa0108880:CDS | 50.0% | |
| TCAAACAAGACCAGCCAGGT+TGG | + | chr1_3:20545302-20545321 | Msa0108880:CDS | 50.0% | |
| CAAACAAGACCAGCCAGGTT+GGG | + | chr1_3:20545303-20545322 | Msa0108880:CDS | 50.0% | |
| TTAGTAGAACCCAACCTGGC+TGG | - | chr1_3:20545315-20545334 | None:intergenic | 50.0% | |
| CGACCGAGCAGTTTCACATT+TGG | - | chr1_3:20545346-20545365 | None:intergenic | 50.0% | |
| AATGTGAAACTGCTCGGTCG+CGG | + | chr1_3:20545346-20545365 | Msa0108880:CDS | 50.0% | |
| CGTTCTCGTGAGTATGACCA+TGG | - | chr1_3:20545609-20545628 | None:intergenic | 50.0% | |
| ACAAAACCACCACTCTCAGC+AGG | - | chr1_3:20545643-20545662 | None:intergenic | 50.0% | |
| ! | GCCTTTTGTGTGCCCTTGAA+TGG | + | chr1_3:20545814-20545833 | Msa0108880:three_prime_UTR | 50.0% |
| ! | CCCATTCAAGGGCACACAAA+AGG | - | chr1_3:20545818-20545837 | None:intergenic | 50.0% |
| CACCGGTGTGGACATGAGTT+AGG | - | chr1_3:20542233-20542252 | None:intergenic | 55.0% | |
| CTCATGTCCACACCGGTGAA+AGG | + | chr1_3:20542235-20542254 | Msa0108880:CDS | 55.0% | |
| CATCGTACCTTTCACCGGTG+TGG | - | chr1_3:20542245-20542264 | None:intergenic | 55.0% | |
| ! | CACCGGTGAAAGGTACGATG+TGG | + | chr1_3:20542245-20542264 | Msa0108880:CDS | 55.0% |
| ATGTGAGCATGGTGCTCACC+AGG | - | chr1_3:20543033-20543052 | None:intergenic | 55.0% | |
| CAGGACCCCCTTGTCTTTGA+TGG | + | chr1_3:20544034-20544053 | Msa0108880:CDS | 55.0% | |
| AAACCACCACTCTCAGCAGG+AGG | - | chr1_3:20545640-20545659 | None:intergenic | 55.0% | |
| TGGCAGACTGGGACTCCTGT+AGG | + | chr1_3:20542427-20542446 | Msa0108880:intron | 60.0% | |
| GAAGCTCCTCCTGCTGAGAG+TGG | + | chr1_3:20545631-20545650 | Msa0108880:CDS | 60.0% | |
| GCTCCTCCTGCTGAGAGTGG+TGG | + | chr1_3:20545634-20545653 | Msa0108880:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 20542053 | 20545976 | 20542053 | ID=Msa0108880;Name=Msa0108880 |
| chr1_3 | mRNA | 20542053 | 20545976 | 20542053 | ID=Msa0108880-mRNA-1;Parent=Msa0108880;Name=Msa0108880-mRNA-1;_AED=0.05;_eAED=0.05;_QI=61|1|1|1|1|1|7|292|701 |
| chr1_3 | exon | 20542053 | 20542338 | 20542053 | ID=Msa0108880-mRNA-1:exon:7431;Parent=Msa0108880-mRNA-1 |
| chr1_3 | exon | 20542433 | 20542522 | 20542433 | ID=Msa0108880-mRNA-1:exon:7432;Parent=Msa0108880-mRNA-1 |
| chr1_3 | exon | 20543015 | 20543448 | 20543015 | ID=Msa0108880-mRNA-1:exon:7433;Parent=Msa0108880-mRNA-1 |
| chr1_3 | exon | 20543673 | 20543767 | 20543673 | ID=Msa0108880-mRNA-1:exon:7434;Parent=Msa0108880-mRNA-1 |
| chr1_3 | exon | 20543939 | 20544072 | 20543939 | ID=Msa0108880-mRNA-1:exon:7435;Parent=Msa0108880-mRNA-1 |
| chr1_3 | exon | 20544430 | 20544915 | 20544430 | ID=Msa0108880-mRNA-1:exon:7436;Parent=Msa0108880-mRNA-1 |
| chr1_3 | exon | 20545043 | 20545976 | 20545043 | ID=Msa0108880-mRNA-1:exon:7437;Parent=Msa0108880-mRNA-1 |
| chr1_3 | five_prime_UTR | 20542053 | 20542113 | 20542053 | ID=Msa0108880-mRNA-1:five_prime_utr;Parent=Msa0108880-mRNA-1 |
| chr1_3 | CDS | 20542114 | 20542338 | 20542114 | ID=Msa0108880-mRNA-1:cds;Parent=Msa0108880-mRNA-1 |
| chr1_3 | CDS | 20542433 | 20542522 | 20542433 | ID=Msa0108880-mRNA-1:cds;Parent=Msa0108880-mRNA-1 |
| chr1_3 | CDS | 20543015 | 20543448 | 20543015 | ID=Msa0108880-mRNA-1:cds;Parent=Msa0108880-mRNA-1 |
| chr1_3 | CDS | 20543673 | 20543767 | 20543673 | ID=Msa0108880-mRNA-1:cds;Parent=Msa0108880-mRNA-1 |
| chr1_3 | CDS | 20543939 | 20544072 | 20543939 | ID=Msa0108880-mRNA-1:cds;Parent=Msa0108880-mRNA-1 |
| chr1_3 | CDS | 20544430 | 20544915 | 20544430 | ID=Msa0108880-mRNA-1:cds;Parent=Msa0108880-mRNA-1 |
| chr1_3 | CDS | 20545043 | 20545684 | 20545043 | ID=Msa0108880-mRNA-1:cds;Parent=Msa0108880-mRNA-1 |
| chr1_3 | three_prime_UTR | 20545685 | 20545976 | 20545685 | ID=Msa0108880-mRNA-1:three_prime_utr;Parent=Msa0108880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
