AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0633440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 64 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATCCAAGGATGCTGATTT+TGG 0.130542 4_3:+19098500 Msa0633440:CDS
ATCTTTATATTGAATGTATT+TGG 0.141751 4_3:+19098956 Msa0633440:three_prime_UTR
TGATGGTCATCAACAGAATT+TGG 0.184073 4_3:+19096980 Msa0633440:CDS
TGATGGTCAACAACAGAATT+TGG 0.195932 4_3:+19098472 Msa0633440:CDS
GCATATTTGGAATTGTTATT+TGG 0.208392 4_3:+19096839 Msa0633440:CDS
AACTATCCCTATACAAGATT+TGG 0.236483 4_3:-19099047 None:intergenic
TCTTCCCCAAATCTTGTATA+GGG 0.283293 4_3:+19099041 Msa0633440:three_prime_UTR
TGAACTCTTGTTAAGAGAAT+TGG 0.288367 4_3:+19098775 Msa0633440:CDS
TTTGGTGTTCTTATGTTTGA+TGG 0.291886 4_3:+19096881 Msa0633440:CDS
TTGTTGAGGGTTTGCATATT+TGG 0.292299 4_3:+19096826 Msa0633440:CDS
TTCTTCCCCAAATCTTGTAT+AGG 0.311667 4_3:+19099040 Msa0633440:three_prime_UTR
CTTTGCAGAAACAATGATTA+AGG 0.317528 4_3:+19098864 Msa0633440:exon
GATGGTCATCAACAGAATTT+GGG 0.329683 4_3:+19096981 Msa0633440:CDS
ACTATCCCTATACAAGATTT+GGG 0.340396 4_3:-19099046 None:intergenic
GATGGTCAACAACAGAATTT+GGG 0.349213 4_3:+19098473 Msa0633440:CDS
TATGATATTGTAAGTAACTT+TGG 0.357091 4_3:+19099143 Msa0633440:three_prime_UTR
ATTGTTTCTGCAAAGTGTAT+TGG 0.357614 4_3:-19098856 None:intergenic
ATCTCACCAGACCTCATCCT+TGG 0.395847 4_3:-19097012 None:intergenic
TTACCATGCACTCTTCTCAT+TGG 0.399767 4_3:+19098998 Msa0633440:three_prime_UTR
TTGGAATTGTTATTTGGAAT+GGG 0.402943 4_3:+19096845 Msa0633440:CDS
TTTGGAATTGTTATTTGGAA+TGG 0.438457 4_3:+19096844 Msa0633440:CDS
ATTCACATGGTCTTCATTGA+AGG 0.443441 4_3:+19098625 Msa0633440:CDS
CATCCCAAAATCAGCATCCT+TGG 0.443573 4_3:-19098504 None:intergenic
GAATGTATTTGGCTAAAGAA+TGG 0.451579 4_3:+19098967 Msa0633440:three_prime_UTR
AGTATGTCAAGGCTTCAAAT+TGG 0.456191 4_3:+19098918 Msa0633440:three_prime_UTR
CCATGCACTCTTCTCATTGG+TGG 0.456340 4_3:+19099001 Msa0633440:three_prime_UTR
TCTCACCAGACCTCATCCTT+GGG 0.459422 4_3:-19097011 None:intergenic
TTTGATACTGTAACAATGAC+AGG 0.459498 4_3:+19099171 Msa0633440:three_prime_UTR
GATTGAGATCTGCTTGTTGA+GGG 0.461078 4_3:+19096813 None:intergenic
AAGCATAGTTATTGACATAG+AGG 0.464267 4_3:-19099091 None:intergenic
TAAGAGAATTGGTTAGAAGA+TGG 0.465771 4_3:+19098786 Msa0633440:CDS
ATCTTGTATAGGGATAGTTT+AGG 0.468140 4_3:+19099051 Msa0633440:three_prime_UTR
TGGTCAGAGGAAACTGATAT+TGG 0.481865 4_3:-19098551 None:intergenic
ATACAAGATTTGGGGAAGAA+AGG 0.497353 4_3:-19099037 None:intergenic
AAGATTTGGGGAAGAAAGGA+AGG 0.506654 4_3:-19099033 None:intergenic
AAATCACAAAGATATGAGAT+TGG 0.521836 4_3:+19098811 Msa0633440:CDS
GGATTGAGATCTGCTTGTTG+AGG 0.527378 4_3:+19096812 None:intergenic
CAGAGGAAACTGATATTGGT+TGG 0.530736 4_3:-19098547 None:intergenic
ATGAACCCAAGGATGAGGTC+TGG 0.534663 4_3:+19097006 Msa0633440:CDS
ATTCTACCGGCGAAGTAGCA+TGG 0.534707 4_3:-19098587 None:intergenic
GGGGAATGAACCCAAGGATG+AGG 0.555484 4_3:+19097001 Msa0633440:CDS
GACTACAGCTGAAATTCTAC+CGG 0.568069 4_3:-19098600 None:intergenic
CAGCTGTAGTCTCATTCACA+TGG 0.568370 4_3:+19098612 Msa0633440:CDS
ATCCCTCCATGCTACTTCGC+CGG 0.573209 4_3:+19098581 Msa0633440:CDS
ATGTCGAGTCGAGTATGTCA+AGG 0.574844 4_3:+19098907 Msa0633440:three_prime_UTR
AAGTAGCATGGAGGGATTAG+CGG 0.575147 4_3:-19098575 None:intergenic
TCTAGTGGTGGTGATGATGA+TGG 0.581366 4_3:+19098455 Msa0633440:intron
AGCATGGAGGGATTAGCGGC+TGG 0.584463 4_3:-19098571 None:intergenic
AAGAGTGCATGGTAAGACCT+TGG 0.591898 4_3:-19098990 None:intergenic
AAATGTTCGTCAAGGAGTAG+AGG 0.599549 4_3:+19096933 Msa0633440:CDS
GAATTTGGGGAATGAATCCA+AGG 0.600921 4_3:+19098487 Msa0633440:CDS
ATTTGGGGAAGAAAGGAAGG+AGG 0.603147 4_3:-19099030 None:intergenic
TACCGGCGAAGTAGCATGGA+GGG 0.614416 4_3:-19098583 None:intergenic
AGGGATTAGCGGCTGGTCAG+AGG 0.617741 4_3:-19098564 None:intergenic
GAATTTGGGGAATGAACCCA+AGG 0.632299 4_3:+19096995 Msa0633440:CDS
AGGTGTCAAAATGTTCGTCA+AGG 0.633094 4_3:+19096925 Msa0633440:CDS
AGTAGAGGAACTATGTCTAG+TGG 0.637170 4_3:+19096948 Msa0633440:CDS
CCACCAATGAGAAGAGTGCA+TGG 0.637746 4_3:-19099001 None:intergenic
ATTTGGCTAAAGAATGGCCA+AGG 0.648082 4_3:+19098973 Msa0633440:three_prime_UTR
CTATCCCTATACAAGATTTG+GGG 0.661248 4_3:-19099045 None:intergenic
TCTAGTGGTGATGAAGATGA+TGG 0.668407 4_3:+19096963 Msa0633440:CDS
ATGGTCAACAACAGAATTTG+GGG 0.683744 4_3:+19098474 Msa0633440:CDS
ATGGTCATCAACAGAATTTG+GGG 0.685770 4_3:+19096982 Msa0633440:CDS
CTACCGGCGAAGTAGCATGG+AGG 0.727997 4_3:-19098584 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTTAATGATTCAATTT+TGG + chr4_3:19097728-19097747 Msa0633440:intron 10.0%
!!! TAATTTAATGATTCAATTTT+GGG + chr4_3:19097729-19097748 Msa0633440:intron 10.0%
!!! TAATTTTAAAAATAGTTTGT+TGG + chr4_3:19097782-19097801 Msa0633440:intron 10.0%
!!! ATAATTTAATGATTCAATTT+TGG + chr4_3:19097728-19097747 Msa0633440:intron 10.0%
!!! TAATTTAATGATTCAATTTT+GGG + chr4_3:19097729-19097748 Msa0633440:intron 10.0%
!!! TAATTTTAAAAATAGTTTGT+TGG + chr4_3:19097782-19097801 Msa0633440:intron 10.0%
!! AATAATTATGTTATAGTTGA+TGG + chr4_3:19097839-19097858 Msa0633440:intron 15.0%
!! ATAAATCAGTAACTAATAAA+AGG - chr4_3:19098069-19098088 None:intergenic 15.0%
!! AAAATAAATTTGAATTAGCA+AGG - chr4_3:19098344-19098363 None:intergenic 15.0%
!!! GCTAATTCAAATTTATTTTT+AGG + chr4_3:19098345-19098364 Msa0633440:intron 15.0%
!!! AATTCAAATTTATTTTTAGG+TGG + chr4_3:19098348-19098367 Msa0633440:intron 15.0%
!!! TTTTGATATAAACAGTTTTA+AGG + chr4_3:19098417-19098436 Msa0633440:intron 15.0%
!! ATCTTTATATTGAATGTATT+TGG + chr4_3:19098956-19098975 Msa0633440:three_prime_UTR 15.0%
!! AATAATTATGTTATAGTTGA+TGG + chr4_3:19097839-19097858 Msa0633440:intron 15.0%
!! ATAAATCAGTAACTAATAAA+AGG - chr4_3:19098069-19098088 None:intergenic 15.0%
!! AAAATAAATTTGAATTAGCA+AGG - chr4_3:19098344-19098363 None:intergenic 15.0%
!!! GCTAATTCAAATTTATTTTT+AGG + chr4_3:19098345-19098364 Msa0633440:intron 15.0%
!!! AATTCAAATTTATTTTTAGG+TGG + chr4_3:19098348-19098367 Msa0633440:intron 15.0%
!!! TTTTGATATAAACAGTTTTA+AGG + chr4_3:19098417-19098436 Msa0633440:intron 15.0%
!! ATCTTTATATTGAATGTATT+TGG + chr4_3:19098956-19098975 Msa0633440:three_prime_UTR 15.0%
!! ACATATGCAAAATAAAATCT+GGG - chr4_3:19097487-19097506 None:intergenic 20.0%
!! AACATATGCAAAATAAAATC+TGG - chr4_3:19097488-19097507 None:intergenic 20.0%
!!! TTTTTCCTTTATTCTAATTC+AGG + chr4_3:19097531-19097550 Msa0633440:intron 20.0%
!!! ATTTTCCGTTTTTTTATTGA+CGG + chr4_3:19097867-19097886 Msa0633440:intron 20.0%
!! TTATTCCGTCAATAAAAAAA+CGG - chr4_3:19097875-19097894 None:intergenic 20.0%
!!! TTACTTTTTGTTATCATGAA+AGG + chr4_3:19098099-19098118 Msa0633440:intron 20.0%
!! GCAATAAACAATATATGATA+TGG + chr4_3:19098183-19098202 Msa0633440:intron 20.0%
!!! GCATTGAATTATTGTATTTT+TGG + chr4_3:19098225-19098244 Msa0633440:intron 20.0%
!! GTTCATGATAACAAAAAAAT+TGG - chr4_3:19098322-19098341 None:intergenic 20.0%
!!! ATAGTTTTAAATTACAGTTG+TGG - chr4_3:19098685-19098704 None:intergenic 20.0%
!! AGACATGATTAAAACTAATA+TGG + chr4_3:19098708-19098727 Msa0633440:intron 20.0%
!! TATGATATTGTAAGTAACTT+TGG + chr4_3:19099143-19099162 Msa0633440:three_prime_UTR 20.0%
!! ACATATGCAAAATAAAATCT+GGG - chr4_3:19097487-19097506 None:intergenic 20.0%
!! AACATATGCAAAATAAAATC+TGG - chr4_3:19097488-19097507 None:intergenic 20.0%
!!! TTTTTCCTTTATTCTAATTC+AGG + chr4_3:19097531-19097550 Msa0633440:intron 20.0%
!!! ATTTTCCGTTTTTTTATTGA+CGG + chr4_3:19097867-19097886 Msa0633440:intron 20.0%
!! TTATTCCGTCAATAAAAAAA+CGG - chr4_3:19097875-19097894 None:intergenic 20.0%
!!! TTACTTTTTGTTATCATGAA+AGG + chr4_3:19098099-19098118 Msa0633440:intron 20.0%
!! GCAATAAACAATATATGATA+TGG + chr4_3:19098183-19098202 Msa0633440:intron 20.0%
!!! GCATTGAATTATTGTATTTT+TGG + chr4_3:19098225-19098244 Msa0633440:intron 20.0%
!! GTTCATGATAACAAAAAAAT+TGG - chr4_3:19098322-19098341 None:intergenic 20.0%
!!! ATAGTTTTAAATTACAGTTG+TGG - chr4_3:19098685-19098704 None:intergenic 20.0%
!! AGACATGATTAAAACTAATA+TGG + chr4_3:19098708-19098727 Msa0633440:intron 20.0%
!! TATGATATTGTAAGTAACTT+TGG + chr4_3:19099143-19099162 Msa0633440:three_prime_UTR 20.0%
!! GCATATTTGGAATTGTTATT+TGG + chr4_3:19096839-19096858 Msa0633440:CDS 25.0%
!!! TTTGGAATTGTTATTTGGAA+TGG + chr4_3:19096844-19096863 Msa0633440:CDS 25.0%
!!! TTGGAATTGTTATTTGGAAT+GGG + chr4_3:19096845-19096864 Msa0633440:CDS 25.0%
!! TTTTGATATGAACAATGGTA+AGG + chr4_3:19096905-19096924 Msa0633440:CDS 25.0%
! TCAATTATATCTCATTCACA+TGG + chr4_3:19097110-19097129 Msa0633440:intron 25.0%
!! GGTATCTTCTTTATTTGATA+TGG + chr4_3:19097144-19097163 Msa0633440:intron 25.0%
!! ATTTTCCTGCATATATTCAA+AGG + chr4_3:19097167-19097186 Msa0633440:intron 25.0%
!! TTTTCCTGCATATATTCAAA+GGG + chr4_3:19097168-19097187 Msa0633440:intron 25.0%
!! CTGTGATTGTTTAGTTATTT+TGG + chr4_3:19097229-19097248 Msa0633440:intron 25.0%
! TTGGTTGTTCATTATTAAGT+TGG + chr4_3:19097277-19097296 Msa0633440:intron 25.0%
! TGGTTGTTCATTATTAAGTT+GGG + chr4_3:19097278-19097297 Msa0633440:intron 25.0%
!!! CATGTTTTTTAGTTAAGCTA+TGG + chr4_3:19097314-19097333 Msa0633440:intron 25.0%
!!! TTTTATTGATTGAATGGTGA+AGG - chr4_3:19097447-19097466 None:intergenic 25.0%
!!! CATATGTTTTGAAAAGTGTT+AGG + chr4_3:19097500-19097519 Msa0633440:intron 25.0%
! CTCACAACTTTAATTAATCT+TGG + chr4_3:19097554-19097573 Msa0633440:intron 25.0%
! ATAATAAATGCACGAAATGA+AGG + chr4_3:19097591-19097610 Msa0633440:intron 25.0%
! ATGAAAATATTAGCCCAAAA+GGG - chr4_3:19097675-19097694 None:intergenic 25.0%
! TATGAAAATATTAGCCCAAA+AGG - chr4_3:19097676-19097695 None:intergenic 25.0%
!!! TTACTTTTTCATACGATTGT+TGG + chr4_3:19097912-19097931 Msa0633440:intron 25.0%
! CATATAAAAAAAACAAGCTC+AGG - chr4_3:19098284-19098303 None:intergenic 25.0%
! CATAAGATACTAACTCTATT+TGG - chr4_3:19098388-19098407 None:intergenic 25.0%
! AGTTAGTATCTTATGTTTGA+TGG + chr4_3:19098393-19098412 Msa0633440:intron 25.0%
!! GGTATCTTCTTTATTTGATA+TGG + chr4_3:19097144-19097163 Msa0633440:intron 25.0%
! AAATCACAAAGATATGAGAT+TGG + chr4_3:19098811-19098830 Msa0633440:CDS 25.0%
!! GCATATTTGGAATTGTTATT+TGG + chr4_3:19096839-19096858 Msa0633440:CDS 25.0%
!!! TTTGGAATTGTTATTTGGAA+TGG + chr4_3:19096844-19096863 Msa0633440:CDS 25.0%
!!! TTGGAATTGTTATTTGGAAT+GGG + chr4_3:19096845-19096864 Msa0633440:CDS 25.0%
!! TTTTGATATGAACAATGGTA+AGG + chr4_3:19096905-19096924 Msa0633440:CDS 25.0%
! TCAATTATATCTCATTCACA+TGG + chr4_3:19097110-19097129 Msa0633440:intron 25.0%
!! GGTATCTTCTTTATTTGATA+TGG + chr4_3:19097144-19097163 Msa0633440:intron 25.0%
!! ATTTTCCTGCATATATTCAA+AGG + chr4_3:19097167-19097186 Msa0633440:intron 25.0%
!! TTTTCCTGCATATATTCAAA+GGG + chr4_3:19097168-19097187 Msa0633440:intron 25.0%
!! CTGTGATTGTTTAGTTATTT+TGG + chr4_3:19097229-19097248 Msa0633440:intron 25.0%
! TTGGTTGTTCATTATTAAGT+TGG + chr4_3:19097277-19097296 Msa0633440:intron 25.0%
! TGGTTGTTCATTATTAAGTT+GGG + chr4_3:19097278-19097297 Msa0633440:intron 25.0%
!!! CATGTTTTTTAGTTAAGCTA+TGG + chr4_3:19097314-19097333 Msa0633440:intron 25.0%
!!! TTTTATTGATTGAATGGTGA+AGG - chr4_3:19097447-19097466 None:intergenic 25.0%
!!! CATATGTTTTGAAAAGTGTT+AGG + chr4_3:19097500-19097519 Msa0633440:intron 25.0%
! CTCACAACTTTAATTAATCT+TGG + chr4_3:19097554-19097573 Msa0633440:intron 25.0%
! ATAATAAATGCACGAAATGA+AGG + chr4_3:19097591-19097610 Msa0633440:intron 25.0%
! ATGAAAATATTAGCCCAAAA+GGG - chr4_3:19097675-19097694 None:intergenic 25.0%
! TATGAAAATATTAGCCCAAA+AGG - chr4_3:19097676-19097695 None:intergenic 25.0%
!!! TTACTTTTTCATACGATTGT+TGG + chr4_3:19097912-19097931 Msa0633440:intron 25.0%
! CATATAAAAAAAACAAGCTC+AGG - chr4_3:19098284-19098303 None:intergenic 25.0%
! CATAAGATACTAACTCTATT+TGG - chr4_3:19098388-19098407 None:intergenic 25.0%
! AGTTAGTATCTTATGTTTGA+TGG + chr4_3:19098393-19098412 Msa0633440:intron 25.0%
!! GGTATCTTCTTTATTTGATA+TGG + chr4_3:19097144-19097163 Msa0633440:intron 25.0%
! AAATCACAAAGATATGAGAT+TGG + chr4_3:19098811-19098830 Msa0633440:CDS 25.0%
!! TTTGGTGTTCTTATGTTTGA+TGG + chr4_3:19096881-19096900 Msa0633440:CDS 30.0%
! ATGGCTTTTGATATGAACAA+TGG + chr4_3:19096900-19096919 Msa0633440:CDS 30.0%
TAGAGGAAACTAATATTGGT+TGG - chr4_3:19097045-19097064 None:intergenic 30.0%
TGGTTAGAGGAAACTAATAT+TGG - chr4_3:19097049-19097068 None:intergenic 30.0%
TTTCCTGCATATATTCAAAG+GGG + chr4_3:19097169-19097188 Msa0633440:intron 30.0%
AATAAACACAACACAGTCAA+GGG - chr4_3:19097198-19097217 None:intergenic 30.0%
TTAAGTAGATCCATGAAGAT+TGG + chr4_3:19097252-19097271 Msa0633440:intron 30.0%
! GGTTGTTCATTATTAAGTTG+GGG + chr4_3:19097279-19097298 Msa0633440:intron 30.0%
!! TCATTATTAAGTTGGGGAAT+TGG + chr4_3:19097285-19097304 Msa0633440:intron 30.0%
! GGTAAGCTTAAATTTTCTCA+GGG - chr4_3:19097393-19097412 None:intergenic 30.0%
! TGGTAAGCTTAAATTTTCTC+AGG - chr4_3:19097394-19097413 None:intergenic 30.0%
!! GTAGGCTTTTATTGATTGAA+TGG - chr4_3:19097453-19097472 None:intergenic 30.0%
TGAAAATATTAGCCCAAAAG+GGG - chr4_3:19097674-19097693 None:intergenic 30.0%
TTGACGGAATAAAAGAAGAA+AGG + chr4_3:19097883-19097902 Msa0633440:intron 30.0%
! TTCCTTCTATAGCTTGATTT+TGG + chr4_3:19098019-19098038 Msa0633440:intron 30.0%
TTCCAAAATCAAGCTATAGA+AGG - chr4_3:19098024-19098043 None:intergenic 30.0%
AATGCCATCCAACAATAATA+GGG - chr4_3:19098210-19098229 None:intergenic 30.0%
!!! TTATTTTTAGGTGGAAGACT+TGG + chr4_3:19098357-19098376 Msa0633440:intron 30.0%
!!! TAAACAGTTTTAAGGAGTAG+AGG + chr4_3:19098425-19098444 Msa0633440:intron 30.0%
! TCTTTATTTGATATGGACCT+TGG + chr4_3:19098653-19098672 Msa0633440:intron 30.0%
AATATGGATTTCTTATCGCT+AGG + chr4_3:19098724-19098743 Msa0633440:intron 30.0%
TGAACTCTTGTTAAGAGAAT+TGG + chr4_3:19098775-19098794 Msa0633440:CDS 30.0%
TAAGAGAATTGGTTAGAAGA+TGG + chr4_3:19098786-19098805 Msa0633440:CDS 30.0%
!! ATTGTTTCTGCAAAGTGTAT+TGG - chr4_3:19098859-19098878 None:intergenic 30.0%
CTTTGCAGAAACAATGATTA+AGG + chr4_3:19098864-19098883 Msa0633440:exon 30.0%
GAATGTATTTGGCTAAAGAA+TGG + chr4_3:19098967-19098986 Msa0633440:three_prime_UTR 30.0%
ACTATCCCTATACAAGATTT+GGG - chr4_3:19099049-19099068 None:intergenic 30.0%
AACTATCCCTATACAAGATT+TGG - chr4_3:19099050-19099069 None:intergenic 30.0%
ATCTTGTATAGGGATAGTTT+AGG + chr4_3:19099051-19099070 Msa0633440:three_prime_UTR 30.0%
AAGCATAGTTATTGACATAG+AGG - chr4_3:19099094-19099113 None:intergenic 30.0%
TTTGATACTGTAACAATGAC+AGG + chr4_3:19099171-19099190 Msa0633440:three_prime_UTR 30.0%
!! TTTGGTGTTCTTATGTTTGA+TGG + chr4_3:19096881-19096900 Msa0633440:CDS 30.0%
! ATGGCTTTTGATATGAACAA+TGG + chr4_3:19096900-19096919 Msa0633440:CDS 30.0%
TAGAGGAAACTAATATTGGT+TGG - chr4_3:19097045-19097064 None:intergenic 30.0%
TGGTTAGAGGAAACTAATAT+TGG - chr4_3:19097049-19097068 None:intergenic 30.0%
TTTCCTGCATATATTCAAAG+GGG + chr4_3:19097169-19097188 Msa0633440:intron 30.0%
AATAAACACAACACAGTCAA+GGG - chr4_3:19097198-19097217 None:intergenic 30.0%
TTAAGTAGATCCATGAAGAT+TGG + chr4_3:19097252-19097271 Msa0633440:intron 30.0%
! GGTTGTTCATTATTAAGTTG+GGG + chr4_3:19097279-19097298 Msa0633440:intron 30.0%
!! TCATTATTAAGTTGGGGAAT+TGG + chr4_3:19097285-19097304 Msa0633440:intron 30.0%
! GGTAAGCTTAAATTTTCTCA+GGG - chr4_3:19097393-19097412 None:intergenic 30.0%
! TGGTAAGCTTAAATTTTCTC+AGG - chr4_3:19097394-19097413 None:intergenic 30.0%
!! GTAGGCTTTTATTGATTGAA+TGG - chr4_3:19097453-19097472 None:intergenic 30.0%
TGAAAATATTAGCCCAAAAG+GGG - chr4_3:19097674-19097693 None:intergenic 30.0%
TTGACGGAATAAAAGAAGAA+AGG + chr4_3:19097883-19097902 Msa0633440:intron 30.0%
! TTCCTTCTATAGCTTGATTT+TGG + chr4_3:19098019-19098038 Msa0633440:intron 30.0%
TTCCAAAATCAAGCTATAGA+AGG - chr4_3:19098024-19098043 None:intergenic 30.0%
AATGCCATCCAACAATAATA+GGG - chr4_3:19098210-19098229 None:intergenic 30.0%
!!! TTATTTTTAGGTGGAAGACT+TGG + chr4_3:19098357-19098376 Msa0633440:intron 30.0%
!!! TAAACAGTTTTAAGGAGTAG+AGG + chr4_3:19098425-19098444 Msa0633440:intron 30.0%
! TCTTTATTTGATATGGACCT+TGG + chr4_3:19098653-19098672 Msa0633440:intron 30.0%
AATATGGATTTCTTATCGCT+AGG + chr4_3:19098724-19098743 Msa0633440:intron 30.0%
TGAACTCTTGTTAAGAGAAT+TGG + chr4_3:19098775-19098794 Msa0633440:CDS 30.0%
TAAGAGAATTGGTTAGAAGA+TGG + chr4_3:19098786-19098805 Msa0633440:CDS 30.0%
!! ATTGTTTCTGCAAAGTGTAT+TGG - chr4_3:19098859-19098878 None:intergenic 30.0%
CTTTGCAGAAACAATGATTA+AGG + chr4_3:19098864-19098883 Msa0633440:exon 30.0%
GAATGTATTTGGCTAAAGAA+TGG + chr4_3:19098967-19098986 Msa0633440:three_prime_UTR 30.0%
ACTATCCCTATACAAGATTT+GGG - chr4_3:19099049-19099068 None:intergenic 30.0%
AACTATCCCTATACAAGATT+TGG - chr4_3:19099050-19099069 None:intergenic 30.0%
ATCTTGTATAGGGATAGTTT+AGG + chr4_3:19099051-19099070 Msa0633440:three_prime_UTR 30.0%
AAGCATAGTTATTGACATAG+AGG - chr4_3:19099094-19099113 None:intergenic 30.0%
TTTGATACTGTAACAATGAC+AGG + chr4_3:19099171-19099190 Msa0633440:three_prime_UTR 30.0%
TTGTTGAGGGTTTGCATATT+TGG + chr4_3:19096826-19096845 Msa0633440:CDS 35.0%
!! TATTTGGAATGGGTTTTTCG+CGG + chr4_3:19096855-19096874 Msa0633440:CDS 35.0%
TGATGGTCATCAACAGAATT+TGG + chr4_3:19096980-19096999 Msa0633440:CDS 35.0%
GATGGTCATCAACAGAATTT+GGG + chr4_3:19096981-19097000 Msa0633440:CDS 35.0%
ATGGTCATCAACAGAATTTG+GGG + chr4_3:19096982-19097001 Msa0633440:CDS 35.0%
AAACCCCTTTGAATATATGC+AGG - chr4_3:19097175-19097194 None:intergenic 35.0%
CAATAAACACAACACAGTCA+AGG - chr4_3:19097199-19097218 None:intergenic 35.0%
ACTTGTAACATGTTGATCCA+TGG + chr4_3:19097354-19097373 Msa0633440:intron 35.0%
ATCTGGGCATTAATAACAGT+AGG - chr4_3:19097471-19097490 None:intergenic 35.0%
GTGAGCCTGAATTAGAATAA+AGG - chr4_3:19097539-19097558 None:intergenic 35.0%
AGTTGTTCTCGTAACATTGT+AGG + chr4_3:19097633-19097652 Msa0633440:intron 35.0%
GAAAATATTAGCCCAAAAGG+GGG - chr4_3:19097673-19097692 None:intergenic 35.0%
! CAATTTTGGGCTAACATTGT+AGG + chr4_3:19097742-19097761 Msa0633440:intron 35.0%
TAGTGCCTCAAATTCCTTAT+TGG + chr4_3:19097995-19098014 Msa0633440:intron 35.0%
GGAAACCAATAAGGAATTTG+AGG - chr4_3:19098003-19098022 None:intergenic 35.0%
GCTATAGAAGGAAACCAATA+AGG - chr4_3:19098012-19098031 None:intergenic 35.0%
TTCTAAGTCAATGTCTAGGT+AGG + chr4_3:19098124-19098143 Msa0633440:intron 35.0%
TGATGTCAAGTACTACTAGT+AGG - chr4_3:19098163-19098182 None:intergenic 35.0%
GATATGGTCCCTATTATTGT+TGG + chr4_3:19098199-19098218 Msa0633440:intron 35.0%
CAATGCCATCCAACAATAAT+AGG - chr4_3:19098211-19098230 None:intergenic 35.0%
!! TTTTTGGCACATTTGAACCT+TGG + chr4_3:19098241-19098260 Msa0633440:intron 35.0%
TGATGGTCAACAACAGAATT+TGG + chr4_3:19098472-19098491 Msa0633440:CDS 35.0%
GATGGTCAACAACAGAATTT+GGG + chr4_3:19098473-19098492 Msa0633440:CDS 35.0%
ATGGTCAACAACAGAATTTG+GGG + chr4_3:19098474-19098493 Msa0633440:CDS 35.0%
!!! AATCCAAGGATGCTGATTTT+GGG + chr4_3:19098501-19098520 Msa0633440:CDS 35.0%
ATTCACATGGTCTTCATTGA+AGG + chr4_3:19098625-19098644 Msa0633440:CDS 35.0%
! TCTTTCTTTTCTCGCAAAGA+TGG - chr4_3:19098755-19098774 None:intergenic 35.0%
AGTATGTCAAGGCTTCAAAT+TGG + chr4_3:19098918-19098937 Msa0633440:three_prime_UTR 35.0%
ATACAAGATTTGGGGAAGAA+AGG - chr4_3:19099040-19099059 None:intergenic 35.0%
TTCTTCCCCAAATCTTGTAT+AGG + chr4_3:19099040-19099059 Msa0633440:three_prime_UTR 35.0%
TCTTCCCCAAATCTTGTATA+GGG + chr4_3:19099041-19099060 Msa0633440:three_prime_UTR 35.0%
CTATCCCTATACAAGATTTG+GGG - chr4_3:19099048-19099067 None:intergenic 35.0%
TTGTTGAGGGTTTGCATATT+TGG + chr4_3:19096826-19096845 Msa0633440:CDS 35.0%
!! TATTTGGAATGGGTTTTTCG+CGG + chr4_3:19096855-19096874 Msa0633440:CDS 35.0%
TGATGGTCATCAACAGAATT+TGG + chr4_3:19096980-19096999 Msa0633440:CDS 35.0%
GATGGTCATCAACAGAATTT+GGG + chr4_3:19096981-19097000 Msa0633440:CDS 35.0%
ATGGTCATCAACAGAATTTG+GGG + chr4_3:19096982-19097001 Msa0633440:CDS 35.0%
AAACCCCTTTGAATATATGC+AGG - chr4_3:19097175-19097194 None:intergenic 35.0%
CAATAAACACAACACAGTCA+AGG - chr4_3:19097199-19097218 None:intergenic 35.0%
ACTTGTAACATGTTGATCCA+TGG + chr4_3:19097354-19097373 Msa0633440:intron 35.0%
ATCTGGGCATTAATAACAGT+AGG - chr4_3:19097471-19097490 None:intergenic 35.0%
GTGAGCCTGAATTAGAATAA+AGG - chr4_3:19097539-19097558 None:intergenic 35.0%
AGTTGTTCTCGTAACATTGT+AGG + chr4_3:19097633-19097652 Msa0633440:intron 35.0%
GAAAATATTAGCCCAAAAGG+GGG - chr4_3:19097673-19097692 None:intergenic 35.0%
! CAATTTTGGGCTAACATTGT+AGG + chr4_3:19097742-19097761 Msa0633440:intron 35.0%
TAGTGCCTCAAATTCCTTAT+TGG + chr4_3:19097995-19098014 Msa0633440:intron 35.0%
GGAAACCAATAAGGAATTTG+AGG - chr4_3:19098003-19098022 None:intergenic 35.0%
GCTATAGAAGGAAACCAATA+AGG - chr4_3:19098012-19098031 None:intergenic 35.0%
TTCTAAGTCAATGTCTAGGT+AGG + chr4_3:19098124-19098143 Msa0633440:intron 35.0%
TGATGTCAAGTACTACTAGT+AGG - chr4_3:19098163-19098182 None:intergenic 35.0%
GATATGGTCCCTATTATTGT+TGG + chr4_3:19098199-19098218 Msa0633440:intron 35.0%
CAATGCCATCCAACAATAAT+AGG - chr4_3:19098211-19098230 None:intergenic 35.0%
!! TTTTTGGCACATTTGAACCT+TGG + chr4_3:19098241-19098260 Msa0633440:intron 35.0%
TGATGGTCAACAACAGAATT+TGG + chr4_3:19098472-19098491 Msa0633440:CDS 35.0%
GATGGTCAACAACAGAATTT+GGG + chr4_3:19098473-19098492 Msa0633440:CDS 35.0%
ATGGTCAACAACAGAATTTG+GGG + chr4_3:19098474-19098493 Msa0633440:CDS 35.0%
!!! AATCCAAGGATGCTGATTTT+GGG + chr4_3:19098501-19098520 Msa0633440:CDS 35.0%
ATTCACATGGTCTTCATTGA+AGG + chr4_3:19098625-19098644 Msa0633440:CDS 35.0%
! TCTTTCTTTTCTCGCAAAGA+TGG - chr4_3:19098755-19098774 None:intergenic 35.0%
AGTATGTCAAGGCTTCAAAT+TGG + chr4_3:19098918-19098937 Msa0633440:three_prime_UTR 35.0%
ATACAAGATTTGGGGAAGAA+AGG - chr4_3:19099040-19099059 None:intergenic 35.0%
TTCTTCCCCAAATCTTGTAT+AGG + chr4_3:19099040-19099059 Msa0633440:three_prime_UTR 35.0%
TCTTCCCCAAATCTTGTATA+GGG + chr4_3:19099041-19099060 Msa0633440:three_prime_UTR 35.0%
CTATCCCTATACAAGATTTG+GGG - chr4_3:19099048-19099067 None:intergenic 35.0%
AGGTGTCAAAATGTTCGTCA+AGG + chr4_3:19096925-19096944 Msa0633440:CDS 40.0%
AAATGTTCGTCAAGGAGTAG+AGG + chr4_3:19096933-19096952 Msa0633440:CDS 40.0%
AGTAGAGGAACTATGTCTAG+TGG + chr4_3:19096948-19096967 Msa0633440:CDS 40.0%
! TCTAGTGGTGATGAAGATGA+TGG + chr4_3:19096963-19096982 Msa0633440:CDS 40.0%
! AACTAATATTGGTTGGAGCG+TGG - chr4_3:19097038-19097057 None:intergenic 40.0%
!! AGGGATTAGTTGTTGGTTAG+AGG - chr4_3:19097062-19097081 None:intergenic 40.0%
ATTCACATGGTCTTCATTGC+AGG + chr4_3:19097123-19097142 Msa0633440:intron 40.0%
AGATCCATGAAGATTGGTGT+TGG + chr4_3:19097258-19097277 Msa0633440:intron 40.0%
ACAACCAACACCAATCTTCA+TGG - chr4_3:19097265-19097284 None:intergenic 40.0%
GTTGATCCATGGTTACTACA+AGG + chr4_3:19097365-19097384 Msa0633440:intron 40.0%
TCGTAACATTGTAGGTCTTG+TGG + chr4_3:19097641-19097660 Msa0633440:intron 40.0%
! CGTAACATTGTAGGTCTTGT+GGG + chr4_3:19097642-19097661 Msa0633440:intron 40.0%
!! GTTTGTTGGCTTGAAATGCA+AGG + chr4_3:19097796-19097815 Msa0633440:intron 40.0%
! TGAGGCACTAATGTAGCTAT+GGG - chr4_3:19097985-19098004 None:intergenic 40.0%
! TTGAGGCACTAATGTAGCTA+TGG - chr4_3:19097986-19098005 None:intergenic 40.0%
GGACTTCTAAGTCAATGTCT+AGG + chr4_3:19098120-19098139 Msa0633440:intron 40.0%
TGGTCCCTATTATTGTTGGA+TGG + chr4_3:19098203-19098222 Msa0633440:intron 40.0%
CTCAGGAATATGAACAACAC+GGG - chr4_3:19098267-19098286 None:intergenic 40.0%
GCTCAGGAATATGAACAACA+CGG - chr4_3:19098268-19098287 None:intergenic 40.0%
AGTAGAGGAATTGTGTCTAG+TGG + chr4_3:19098440-19098459 Msa0633440:intron 40.0%
GAATTTGGGGAATGAATCCA+AGG + chr4_3:19098487-19098506 Msa0633440:CDS 40.0%
!!! GAATCCAAGGATGCTGATTT+TGG + chr4_3:19098500-19098519 Msa0633440:CDS 40.0%
CAGAGGAAACTGATATTGGT+TGG - chr4_3:19098550-19098569 None:intergenic 40.0%
TGGTCAGAGGAAACTGATAT+TGG - chr4_3:19098554-19098573 None:intergenic 40.0%
GACTACAGCTGAAATTCTAC+CGG - chr4_3:19098603-19098622 None:intergenic 40.0%
TTTGATATGGACCTTGGCAA+TGG + chr4_3:19098659-19098678 Msa0633440:intron 40.0%
ATTTGGCTAAAGAATGGCCA+AGG + chr4_3:19098973-19098992 Msa0633440:three_prime_UTR 40.0%
TTACCATGCACTCTTCTCAT+TGG + chr4_3:19098998-19099017 Msa0633440:three_prime_UTR 40.0%
AAGATTTGGGGAAGAAAGGA+AGG - chr4_3:19099036-19099055 None:intergenic 40.0%
AGGTGTCAAAATGTTCGTCA+AGG + chr4_3:19096925-19096944 Msa0633440:CDS 40.0%
AAATGTTCGTCAAGGAGTAG+AGG + chr4_3:19096933-19096952 Msa0633440:CDS 40.0%
AGTAGAGGAACTATGTCTAG+TGG + chr4_3:19096948-19096967 Msa0633440:CDS 40.0%
! TCTAGTGGTGATGAAGATGA+TGG + chr4_3:19096963-19096982 Msa0633440:CDS 40.0%
! AACTAATATTGGTTGGAGCG+TGG - chr4_3:19097038-19097057 None:intergenic 40.0%
!! AGGGATTAGTTGTTGGTTAG+AGG - chr4_3:19097062-19097081 None:intergenic 40.0%
ATTCACATGGTCTTCATTGC+AGG + chr4_3:19097123-19097142 Msa0633440:intron 40.0%
AGATCCATGAAGATTGGTGT+TGG + chr4_3:19097258-19097277 Msa0633440:intron 40.0%
ACAACCAACACCAATCTTCA+TGG - chr4_3:19097265-19097284 None:intergenic 40.0%
GTTGATCCATGGTTACTACA+AGG + chr4_3:19097365-19097384 Msa0633440:intron 40.0%
TCGTAACATTGTAGGTCTTG+TGG + chr4_3:19097641-19097660 Msa0633440:intron 40.0%
! CGTAACATTGTAGGTCTTGT+GGG + chr4_3:19097642-19097661 Msa0633440:intron 40.0%
!! GTTTGTTGGCTTGAAATGCA+AGG + chr4_3:19097796-19097815 Msa0633440:intron 40.0%
! TGAGGCACTAATGTAGCTAT+GGG - chr4_3:19097985-19098004 None:intergenic 40.0%
! TTGAGGCACTAATGTAGCTA+TGG - chr4_3:19097986-19098005 None:intergenic 40.0%
GGACTTCTAAGTCAATGTCT+AGG + chr4_3:19098120-19098139 Msa0633440:intron 40.0%
TGGTCCCTATTATTGTTGGA+TGG + chr4_3:19098203-19098222 Msa0633440:intron 40.0%
CTCAGGAATATGAACAACAC+GGG - chr4_3:19098267-19098286 None:intergenic 40.0%
GCTCAGGAATATGAACAACA+CGG - chr4_3:19098268-19098287 None:intergenic 40.0%
AGTAGAGGAATTGTGTCTAG+TGG + chr4_3:19098440-19098459 Msa0633440:intron 40.0%
GAATTTGGGGAATGAATCCA+AGG + chr4_3:19098487-19098506 Msa0633440:CDS 40.0%
!!! GAATCCAAGGATGCTGATTT+TGG + chr4_3:19098500-19098519 Msa0633440:CDS 40.0%
CAGAGGAAACTGATATTGGT+TGG - chr4_3:19098550-19098569 None:intergenic 40.0%
TGGTCAGAGGAAACTGATAT+TGG - chr4_3:19098554-19098573 None:intergenic 40.0%
GACTACAGCTGAAATTCTAC+CGG - chr4_3:19098603-19098622 None:intergenic 40.0%
TTTGATATGGACCTTGGCAA+TGG + chr4_3:19098659-19098678 Msa0633440:intron 40.0%
ATTTGGCTAAAGAATGGCCA+AGG + chr4_3:19098973-19098992 Msa0633440:three_prime_UTR 40.0%
TTACCATGCACTCTTCTCAT+TGG + chr4_3:19098998-19099017 Msa0633440:three_prime_UTR 40.0%
AAGATTTGGGGAAGAAAGGA+AGG - chr4_3:19099036-19099055 None:intergenic 40.0%
! ATGGGTTTTTCGCGGCAATT+TGG + chr4_3:19096863-19096882 Msa0633440:CDS 45.0%
GAATTTGGGGAATGAACCCA+AGG + chr4_3:19096995-19097014 Msa0633440:CDS 45.0%
AATTCTACCAGCGAAGCAAG+CGG - chr4_3:19097090-19097109 None:intergenic 45.0%
AGGGAACCTTGTAGTAACCA+TGG - chr4_3:19097374-19097393 None:intergenic 45.0%
AGGTCAACAAGGTGAACATG+TGG - chr4_3:19097414-19097433 None:intergenic 45.0%
GATTGTGCTGAAGGTCAACA+AGG - chr4_3:19097425-19097444 None:intergenic 45.0%
ATGGTGAAGGATTGTGCTGA+AGG - chr4_3:19097434-19097453 None:intergenic 45.0%
AATATGAACAACACGGGCCA+AGG - chr4_3:19098261-19098280 None:intergenic 45.0%
AGAGGAATTGTGTCTAGTGG+TGG + chr4_3:19098443-19098462 Msa0633440:intron 45.0%
! TCTAGTGGTGGTGATGATGA+TGG + chr4_3:19098455-19098474 Msa0633440:intron 45.0%
CATCCCAAAATCAGCATCCT+TGG - chr4_3:19098507-19098526 None:intergenic 45.0%
!!! CAAGGATGCTGATTTTGGGA+TGG + chr4_3:19098505-19098524 Msa0633440:CDS 45.0%
AAGTAGCATGGAGGGATTAG+CGG - chr4_3:19098578-19098597 None:intergenic 45.0%
CAGCTGTAGTCTCATTCACA+TGG + chr4_3:19098612-19098631 Msa0633440:CDS 45.0%
ATGTCGAGTCGAGTATGTCA+AGG + chr4_3:19098907-19098926 Msa0633440:three_prime_UTR 45.0%
! AAGAGTGCATGGTAAGACCT+TGG - chr4_3:19098993-19099012 None:intergenic 45.0%
ATTTGGGGAAGAAAGGAAGG+AGG - chr4_3:19099033-19099052 None:intergenic 45.0%
! ATGGGTTTTTCGCGGCAATT+TGG + chr4_3:19096863-19096882 Msa0633440:CDS 45.0%
GAATTTGGGGAATGAACCCA+AGG + chr4_3:19096995-19097014 Msa0633440:CDS 45.0%
AATTCTACCAGCGAAGCAAG+CGG - chr4_3:19097090-19097109 None:intergenic 45.0%
AGGGAACCTTGTAGTAACCA+TGG - chr4_3:19097374-19097393 None:intergenic 45.0%
AGGTCAACAAGGTGAACATG+TGG - chr4_3:19097414-19097433 None:intergenic 45.0%
GATTGTGCTGAAGGTCAACA+AGG - chr4_3:19097425-19097444 None:intergenic 45.0%
ATGGTGAAGGATTGTGCTGA+AGG - chr4_3:19097434-19097453 None:intergenic 45.0%
AATATGAACAACACGGGCCA+AGG - chr4_3:19098261-19098280 None:intergenic 45.0%
AGAGGAATTGTGTCTAGTGG+TGG + chr4_3:19098443-19098462 Msa0633440:intron 45.0%
! TCTAGTGGTGGTGATGATGA+TGG + chr4_3:19098455-19098474 Msa0633440:intron 45.0%
CATCCCAAAATCAGCATCCT+TGG - chr4_3:19098507-19098526 None:intergenic 45.0%
!!! CAAGGATGCTGATTTTGGGA+TGG + chr4_3:19098505-19098524 Msa0633440:CDS 45.0%
AAGTAGCATGGAGGGATTAG+CGG - chr4_3:19098578-19098597 None:intergenic 45.0%
CAGCTGTAGTCTCATTCACA+TGG + chr4_3:19098612-19098631 Msa0633440:CDS 45.0%
ATGTCGAGTCGAGTATGTCA+AGG + chr4_3:19098907-19098926 Msa0633440:three_prime_UTR 45.0%
! AAGAGTGCATGGTAAGACCT+TGG - chr4_3:19098993-19099012 None:intergenic 45.0%
ATTTGGGGAAGAAAGGAAGG+AGG - chr4_3:19099033-19099052 None:intergenic 45.0%
ATGAACCCAAGGATGAGGTC+TGG + chr4_3:19097006-19097025 Msa0633440:CDS 50.0%
TCTCACCAGACCTCATCCTT+GGG - chr4_3:19097014-19097033 None:intergenic 50.0%
ATCTCACCAGACCTCATCCT+TGG - chr4_3:19097015-19097034 None:intergenic 50.0%
!! GGCATGGAGGGATTAGTTGT+TGG - chr4_3:19097069-19097088 None:intergenic 50.0%
! TTGTGGGTTTCACCCCCTTT+TGG + chr4_3:19097658-19097677 Msa0633440:intron 50.0%
! TGTGGGTTTCACCCCCTTTT+GGG + chr4_3:19097659-19097678 Msa0633440:intron 50.0%
GGCACTAATGTAGCTATGGG+AGG - chr4_3:19097982-19098001 None:intergenic 50.0%
ATTCTACCGGCGAAGTAGCA+TGG - chr4_3:19098590-19098609 None:intergenic 50.0%
TACAGTTGTGGCCATTGCCA+AGG - chr4_3:19098673-19098692 None:intergenic 50.0%
! CCACCAATGAGAAGAGTGCA+TGG - chr4_3:19099004-19099023 None:intergenic 50.0%
CCATGCACTCTTCTCATTGG+TGG + chr4_3:19099001-19099020 Msa0633440:three_prime_UTR 50.0%
ATGAACCCAAGGATGAGGTC+TGG + chr4_3:19097006-19097025 Msa0633440:CDS 50.0%
TCTCACCAGACCTCATCCTT+GGG - chr4_3:19097014-19097033 None:intergenic 50.0%
ATCTCACCAGACCTCATCCT+TGG - chr4_3:19097015-19097034 None:intergenic 50.0%
!! GGCATGGAGGGATTAGTTGT+TGG - chr4_3:19097069-19097088 None:intergenic 50.0%
! TTGTGGGTTTCACCCCCTTT+TGG + chr4_3:19097658-19097677 Msa0633440:intron 50.0%
! TGTGGGTTTCACCCCCTTTT+GGG + chr4_3:19097659-19097678 Msa0633440:intron 50.0%
GGCACTAATGTAGCTATGGG+AGG - chr4_3:19097982-19098001 None:intergenic 50.0%
ATTCTACCGGCGAAGTAGCA+TGG - chr4_3:19098590-19098609 None:intergenic 50.0%
TACAGTTGTGGCCATTGCCA+AGG - chr4_3:19098673-19098692 None:intergenic 50.0%
! CCACCAATGAGAAGAGTGCA+TGG - chr4_3:19099004-19099023 None:intergenic 50.0%
CCATGCACTCTTCTCATTGG+TGG + chr4_3:19099001-19099020 Msa0633440:three_prime_UTR 50.0%
GGGGAATGAACCCAAGGATG+AGG + chr4_3:19097001-19097020 Msa0633440:CDS 55.0%
! ATCCCTCCATGCTACTTCGC+CGG + chr4_3:19098581-19098600 Msa0633440:CDS 55.0%
TACCGGCGAAGTAGCATGGA+GGG - chr4_3:19098586-19098605 None:intergenic 55.0%
GGGGAATGAACCCAAGGATG+AGG + chr4_3:19097001-19097020 Msa0633440:CDS 55.0%
! ATCCCTCCATGCTACTTCGC+CGG + chr4_3:19098581-19098600 Msa0633440:CDS 55.0%
TACCGGCGAAGTAGCATGGA+GGG - chr4_3:19098586-19098605 None:intergenic 55.0%
AGCGAAGCAAGCGGCATGGA+GGG - chr4_3:19097081-19097100 None:intergenic 60.0%
TACCAGCGAAGCAAGCGGCA+TGG - chr4_3:19097085-19097104 None:intergenic 60.0%
! AGGGATTAGCGGCTGGTCAG+AGG - chr4_3:19098567-19098586 None:intergenic 60.0%
! AGCATGGAGGGATTAGCGGC+TGG - chr4_3:19098574-19098593 None:intergenic 60.0%
CTACCGGCGAAGTAGCATGG+AGG - chr4_3:19098587-19098606 None:intergenic 60.0%
AGCGAAGCAAGCGGCATGGA+GGG - chr4_3:19097081-19097100 None:intergenic 60.0%
TACCAGCGAAGCAAGCGGCA+TGG - chr4_3:19097085-19097104 None:intergenic 60.0%
! AGGGATTAGCGGCTGGTCAG+AGG - chr4_3:19098567-19098586 None:intergenic 60.0%
! AGCATGGAGGGATTAGCGGC+TGG - chr4_3:19098574-19098593 None:intergenic 60.0%
CTACCGGCGAAGTAGCATGG+AGG - chr4_3:19098587-19098606 None:intergenic 60.0%
CAGCGAAGCAAGCGGCATGG+AGG - chr4_3:19097082-19097101 None:intergenic 65.0%
! CTCCATGCCGCTTGCTTCGC+TGG + chr4_3:19097080-19097099 Msa0633440:intron 65.0%
CAGCGAAGCAAGCGGCATGG+AGG - chr4_3:19097082-19097101 None:intergenic 65.0%
! CTCCATGCCGCTTGCTTCGC+TGG + chr4_3:19097080-19097099 Msa0633440:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 19096822 19099215 19096822 ID=Msa0633440;Name=Msa0633440
chr4_3 mRNA 19096822 19099215 19096822 ID=Msa0633440-mRNA-1;Parent=Msa0633440;Name=Msa0633440-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|0.5|0.33|1|1|1|3|335|175
chr4_3 exon 19096822 19097027 19096822 ID=Msa0633440-mRNA-1:exon:5229;Parent=Msa0633440-mRNA-1
chr4_3 exon 19098460 19098646 19098460 ID=Msa0633440-mRNA-1:exon:5230;Parent=Msa0633440-mRNA-1
chr4_3 exon 19098746 19099215 19098746 ID=Msa0633440-mRNA-1:exon:5231;Parent=Msa0633440-mRNA-1
chr4_3 CDS 19096822 19097027 19096822 ID=Msa0633440-mRNA-1:cds;Parent=Msa0633440-mRNA-1
chr4_3 CDS 19098460 19098646 19098460 ID=Msa0633440-mRNA-1:cds;Parent=Msa0633440-mRNA-1
chr4_3 CDS 19098746 19098880 19098746 ID=Msa0633440-mRNA-1:cds;Parent=Msa0633440-mRNA-1
chr4_3 three_prime_UTR 19098881 19099215 19098881 ID=Msa0633440-mRNA-1:three_prime_utr;Parent=Msa0633440-mRNA-1
Gene Sequence

>Msa0633440

CTGCTTGTTGAGGGTTTGCATATTTGGAATTGTTATTTGGAATGGGTTTTTCGCGGCAATTTGGTGTTCTTATGTTTGATGGCTTTTGATATGAACAATGGTAAGGTGTCAAAATGTTCGTCAAGGAGTAGAGGAACTATGTCTAGTGGTGATGAAGATGATGGTCATCAACAGAATTTGGGGAATGAACCCAAGGATGAGGTCTGTGGTGGTGATGATGATGGTCAACAACAGAATTTGGGGAATGAATCCAAGGATGCTGATTTTGGGATGGTTCTGATGAGATTCACGCTCCAACCAATATCAGTTTCCTCTGACCAGCCGCTAATCCCTCCATGCTACTTCGCCGGTAGAATTTCAGCTGTAGTCTCATTCACATGGTCTTCATTGAAGGTTCTTCCATCTTTGCGAGAAAAGAAAGATGAACTCTTGTTAAGAGAATTGGTTAGAAGATGGTCAAATCACAAAGATATGAGATTGGAGAAAGTACAGAAAAATACGATCCAATACACTTTGCAGAAACAATGA
Protein sequence

>Msa0633440

LLVEGLHIWNCYLEWVFRGNLVFLCLMAFDMNNGKVSKCSSRSRGTMSSGDEDDGHQQNLGNEPKDEVCGGDDDGQQQNLGNESKDADFGMVLMRFTLQPISVSSDQPLIPPCYFAGRISAVVSFTWSSLKVLPSLREKKDELLLRELVRRWSNHKDMRLEKVQKNTIQYTLQKQ*