Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276890 | RHN39535.1 | 82.967 | 182 | 27 | 1 | 141 | 318 | 5 | 186 | 6.55e-99 | 299 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276890 | sp|Q9C9C0|SPPA1_ARATH | 57.647 | 170 | 63 | 4 | 141 | 301 | 441 | 610 | 4.95e-44 | 162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276890 | A0A396GLK3 | 82.967 | 182 | 27 | 1 | 141 | 318 | 5 | 186 | 3.13e-99 | 299 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002230 | Msa1276890 | 0.819482 | 1.134601e-52 | -8.615850e-47 |
| Msa0002240 | Msa1276890 | 0.829147 | 6.055578e-55 | -8.615850e-47 |
| Msa0003890 | Msa1276890 | 0.817578 | 3.066334e-52 | -8.615850e-47 |
| Msa0011170 | Msa1276890 | 0.816516 | 5.312267e-52 | -8.615850e-47 |
| Msa0011660 | Msa1276890 | -0.826460 | 2.679686e-54 | -8.615850e-47 |
| Msa0015390 | Msa1276890 | 0.815481 | 9.044962e-52 | -8.615850e-47 |
| Msa0015400 | Msa1276890 | 0.801599 | 8.346628e-49 | -8.615850e-47 |
| Msa0017510 | Msa1276890 | 0.801824 | 7.502453e-49 | -8.615850e-47 |
| Msa0017840 | Msa1276890 | 0.806195 | 9.253538e-50 | -8.615850e-47 |
| Msa0018650 | Msa1276890 | 0.829965 | 3.831117e-55 | -8.615850e-47 |
| Msa0021510 | Msa1276890 | 0.811431 | 7.025974e-51 | -8.615850e-47 |
| Msa0031520 | Msa1276890 | 0.803651 | 3.149452e-49 | -8.615850e-47 |
| Msa0036140 | Msa1276890 | 0.801691 | 7.989257e-49 | -8.615850e-47 |
| Msa0037570 | Msa1276890 | -0.826841 | 2.173506e-54 | -8.615850e-47 |
| Msa0044000 | Msa1276890 | 0.816082 | 6.643227e-52 | -8.615850e-47 |
| Msa0044260 | Msa1276890 | 0.830979 | 2.164460e-55 | -8.615850e-47 |
| Msa0044330 | Msa1276890 | 0.837856 | 4.059917e-57 | -8.615850e-47 |
| Msa0047110 | Msa1276890 | 0.837901 | 3.953838e-57 | -8.615850e-47 |
| Msa0050390 | Msa1276890 | 0.800848 | 1.188618e-48 | -8.615850e-47 |
| Msa0051020 | Msa1276890 | 0.801603 | 8.327946e-49 | -8.615850e-47 |
| Msa0075470 | Msa1276890 | 0.826596 | 2.487065e-54 | -8.615850e-47 |
| Msa0076220 | Msa1276890 | 0.806803 | 6.887849e-50 | -8.615850e-47 |
| Msa0078900 | Msa1276890 | 0.804007 | 2.655990e-49 | -8.615850e-47 |
| Msa0079180 | Msa1276890 | 0.832044 | 1.183352e-55 | -8.615850e-47 |
| Msa0084380 | Msa1276890 | 0.812131 | 4.947344e-51 | -8.615850e-47 |
| Msa0095970 | Msa1276890 | 0.816444 | 5.512070e-52 | -8.615850e-47 |
| Msa0104240 | Msa1276890 | 0.804545 | 2.052322e-49 | -8.615850e-47 |
| Msa0112590 | Msa1276890 | 0.820251 | 7.569736e-53 | -8.615850e-47 |
| Msa0114060 | Msa1276890 | 0.827621 | 1.414338e-54 | -8.615850e-47 |
| Msa0115270 | Msa1276890 | 0.801833 | 7.471399e-49 | -8.615850e-47 |
| Msa0610430 | Msa1276890 | 0.811694 | 6.158674e-51 | -8.615850e-47 |
| Msa0610800 | Msa1276890 | 0.824067 | 9.866786e-54 | -8.615850e-47 |
| Msa0613440 | Msa1276890 | 0.808555 | 2.923359e-50 | -8.615850e-47 |
| Msa0615710 | Msa1276890 | 0.812760 | 3.605224e-51 | -8.615850e-47 |
| Msa0616160 | Msa1276890 | 0.821902 | 3.153056e-53 | -8.615850e-47 |
| Msa0621490 | Msa1276890 | 0.820748 | 5.820445e-53 | -8.615850e-47 |
| Msa0625720 | Msa1276890 | 0.800174 | 1.631341e-48 | -8.615850e-47 |
| Msa0632740 | Msa1276890 | 0.816949 | 4.248648e-52 | -8.615850e-47 |
| Msa0633440 | Msa1276890 | 0.814147 | 1.786623e-51 | -8.615850e-47 |
| Msa0641670 | Msa1276890 | 0.817728 | 2.836400e-52 | -8.615850e-47 |
| Msa0643350 | Msa1276890 | 0.806598 | 7.609070e-50 | -8.615850e-47 |
| Msa0645300 | Msa1276890 | 0.807276 | 5.470578e-50 | -8.615850e-47 |
| Msa0649110 | Msa1276890 | 0.847971 | 8.248874e-60 | -8.615850e-47 |
| Msa0661190 | Msa1276890 | -0.805838 | 1.100250e-49 | -8.615850e-47 |
| Msa0661650 | Msa1276890 | 0.806846 | 6.747138e-50 | -8.615850e-47 |
| Msa0663390 | Msa1276890 | 0.800072 | 1.710798e-48 | -8.615850e-47 |
| Msa0664410 | Msa1276890 | 0.802124 | 6.509053e-49 | -8.615850e-47 |
| Msa0669320 | Msa1276890 | 0.806427 | 8.271256e-50 | -8.615850e-47 |
| Msa0672690 | Msa1276890 | 0.800874 | 1.174283e-48 | -8.615850e-47 |
| Msa0677410 | Msa1276890 | 0.815188 | 1.050835e-51 | -8.615850e-47 |
| Msa0681250 | Msa1276890 | 0.805616 | 1.224631e-49 | -8.615850e-47 |
| Msa0681270 | Msa1276890 | 0.812657 | 3.797059e-51 | -8.615850e-47 |
| Msa0688390 | Msa1276890 | 0.803546 | 3.311220e-49 | -8.615850e-47 |
| Msa0688480 | Msa1276890 | 0.803195 | 3.913941e-49 | -8.615850e-47 |
| Msa0701010 | Msa1276890 | 0.838909 | 2.172624e-57 | -8.615850e-47 |
| Msa0703780 | Msa1276890 | 0.815630 | 8.379754e-52 | -8.615850e-47 |
| Msa0707250 | Msa1276890 | 0.801053 | 1.079700e-48 | -8.615850e-47 |
| Msa0731550 | Msa1276890 | 0.804317 | 2.289079e-49 | -8.615850e-47 |
| Msa0731940 | Msa1276890 | 0.850423 | 1.714520e-60 | -8.615850e-47 |
| Msa0735170 | Msa1276890 | 0.841820 | 3.768758e-58 | -8.615850e-47 |
| Msa0735660 | Msa1276890 | 0.830687 | 2.551666e-55 | -8.615850e-47 |
| Msa0739280 | Msa1276890 | 0.812337 | 4.461211e-51 | -8.615850e-47 |
| Msa0743720 | Msa1276890 | 0.824906 | 6.263286e-54 | -8.615850e-47 |
| Msa0744040 | Msa1276890 | 0.802270 | 6.076315e-49 | -8.615850e-47 |
| Msa0748970 | Msa1276890 | 0.834065 | 3.717145e-56 | -8.615850e-47 |
| Msa0753720 | Msa1276890 | 0.837146 | 6.173314e-57 | -8.615850e-47 |
| Msa0755050 | Msa1276890 | 0.810090 | 1.369996e-50 | -8.615850e-47 |
| Msa0755180 | Msa1276890 | 0.808708 | 2.712188e-50 | -8.615850e-47 |
| Msa0756460 | Msa1276890 | 0.801955 | 7.052434e-49 | -8.615850e-47 |
| Msa0760130 | Msa1276890 | 0.817699 | 2.879224e-52 | -8.615850e-47 |
| Msa0764830 | Msa1276890 | 0.802371 | 5.792039e-49 | -8.615850e-47 |
| Msa0765910 | Msa1276890 | 0.812965 | 3.250483e-51 | -8.615850e-47 |
| Msa0766630 | Msa1276890 | 0.826307 | 2.914655e-54 | -8.615850e-47 |
| Msa0767170 | Msa1276890 | 0.813676 | 2.268917e-51 | -8.615850e-47 |
| Msa0768290 | Msa1276890 | 0.846937 | 1.586978e-59 | -8.615850e-47 |
| Msa0768370 | Msa1276890 | 0.859777 | 3.270154e-63 | -8.615850e-47 |
| Msa0773540 | Msa1276890 | 0.827441 | 1.562195e-54 | -8.615850e-47 |
| Msa0781750 | Msa1276890 | 0.821376 | 4.172206e-53 | -8.615850e-47 |
| Msa0796700 | Msa1276890 | 0.817532 | 3.140853e-52 | -8.615850e-47 |
| Msa0807370 | Msa1276890 | 0.817936 | 2.545626e-52 | -8.615850e-47 |
| Msa0808080 | Msa1276890 | 0.818758 | 1.658462e-52 | -8.615850e-47 |
| Msa0810220 | Msa1276890 | 0.829394 | 5.274796e-55 | -8.615850e-47 |
| Msa0820850 | Msa1276890 | 0.815618 | 8.430197e-52 | -8.615850e-47 |
| Msa0824590 | Msa1276890 | 0.820225 | 7.674934e-53 | -8.615850e-47 |
| Msa0826320 | Msa1276890 | 0.802265 | 6.091011e-49 | -8.615850e-47 |
| Msa0828940 | Msa1276890 | 0.800946 | 1.135116e-48 | -8.615850e-47 |
| Msa0831850 | Msa1276890 | 0.803651 | 3.148499e-49 | -8.615850e-47 |
| Msa0832340 | Msa1276890 | 0.827905 | 1.208642e-54 | -8.615850e-47 |
| Msa0833290 | Msa1276890 | 0.800731 | 1.256015e-48 | -8.615850e-47 |
| Msa0835800 | Msa1276890 | 0.818808 | 1.616053e-52 | -8.615850e-47 |
| Msa0127800 | Msa1276890 | 0.803452 | 3.462280e-49 | -8.615850e-47 |
| Msa0131770 | Msa1276890 | 0.845487 | 3.938055e-59 | -8.615850e-47 |
| Msa0150840 | Msa1276890 | 0.840134 | 1.044082e-57 | -8.615850e-47 |
| Msa0157290 | Msa1276890 | 0.802898 | 4.509676e-49 | -8.615850e-47 |
| Msa0161950 | Msa1276890 | -0.805616 | 1.225018e-49 | -8.615850e-47 |
| Msa0165210 | Msa1276890 | 0.810303 | 1.232551e-50 | -8.615850e-47 |
| Msa0166560 | Msa1276890 | 0.823189 | 1.583753e-53 | -8.615850e-47 |
| Msa0170220 | Msa1276890 | 0.826106 | 3.253861e-54 | -8.615850e-47 |
| Msa0171540 | Msa1276890 | 0.810291 | 1.239961e-50 | -8.615850e-47 |
| Msa0180500 | Msa1276890 | 0.863375 | 2.604618e-64 | -8.615850e-47 |
| Msa0195980 | Msa1276890 | 0.819145 | 1.354673e-52 | -8.615850e-47 |
| Msa0198340 | Msa1276890 | 0.801563 | 8.489497e-49 | -8.615850e-47 |
| Msa0198910 | Msa1276890 | 0.816642 | 4.979000e-52 | -8.615850e-47 |
| Msa0208090 | Msa1276890 | 0.824816 | 6.574587e-54 | -8.615850e-47 |
| Msa0211150 | Msa1276890 | 0.833921 | 4.040351e-56 | -8.615850e-47 |
| Msa0212990 | Msa1276890 | 0.809205 | 2.123060e-50 | -8.615850e-47 |
| Msa0216910 | Msa1276890 | 0.821038 | 4.991789e-53 | -8.615850e-47 |
| Msa0222890 | Msa1276890 | 0.812821 | 3.496216e-51 | -8.615850e-47 |
| Msa0223260 | Msa1276890 | 0.820435 | 6.869284e-53 | -8.615850e-47 |
| Msa0228070 | Msa1276890 | 0.802576 | 5.255174e-49 | -8.615850e-47 |
| Msa0229380 | Msa1276890 | 0.816724 | 4.771498e-52 | -8.615850e-47 |
| Msa0236510 | Msa1276890 | -0.808097 | 3.660549e-50 | -8.615850e-47 |
| Msa1226270 | Msa1276890 | 0.805385 | 1.369560e-49 | -8.615850e-47 |
| Msa1226660 | Msa1276890 | 0.802127 | 6.502519e-49 | -8.615850e-47 |
| Msa1227730 | Msa1276890 | 0.826464 | 2.674935e-54 | -8.615850e-47 |
| Msa1228590 | Msa1276890 | 0.813464 | 2.525776e-51 | -8.615850e-47 |
| Msa1232740 | Msa1276890 | 0.822642 | 2.124232e-53 | -8.615850e-47 |
| Msa1238740 | Msa1276890 | 0.815374 | 9.551321e-52 | -8.615850e-47 |
| Msa1238930 | Msa1276890 | 0.820253 | 7.564751e-53 | -8.615850e-47 |
| Msa1242670 | Msa1276890 | 0.810496 | 1.119679e-50 | -8.615850e-47 |
| Msa1244250 | Msa1276890 | 0.812021 | 5.226500e-51 | -8.615850e-47 |
| Msa1246510 | Msa1276890 | 0.819737 | 9.924654e-53 | -8.615850e-47 |
| Msa1248370 | Msa1276890 | 0.801570 | 8.459258e-49 | -8.615850e-47 |
| Msa1252140 | Msa1276890 | 0.819276 | 1.264645e-52 | -8.615850e-47 |
| Msa1253020 | Msa1276890 | 0.810010 | 1.425819e-50 | -8.615850e-47 |
| Msa1260620 | Msa1276890 | 0.827945 | 1.181581e-54 | -8.615850e-47 |
| Msa1276600 | Msa1276890 | 0.830723 | 2.500837e-55 | -8.615850e-47 |
| Msa1276890 | Msa1276900 | 0.808987 | 2.364240e-50 | -8.615850e-47 |
| Msa1276890 | Msa1277660 | 0.822801 | 1.950065e-53 | -8.615850e-47 |
| Msa1276890 | Msa1282580 | -0.814895 | 1.220116e-51 | -8.615850e-47 |
| Msa1276890 | Msa1284680 | 0.830595 | 2.687938e-55 | -8.615850e-47 |
| Msa1276890 | Msa1286800 | 0.852326 | 4.966869e-61 | -8.615850e-47 |
| Msa1276890 | Msa1287190 | 0.830383 | 3.029174e-55 | -8.615850e-47 |
| Msa1276890 | Msa1287460 | 0.839286 | 1.734885e-57 | -8.615850e-47 |
| Msa1276890 | Msa1288050 | 0.801904 | 7.224547e-49 | -8.615850e-47 |
| Msa1276890 | Msa1288560 | 0.800874 | 1.174225e-48 | -8.615850e-47 |
| Msa1276890 | Msa1298510 | 0.815509 | 8.915469e-52 | -8.615850e-47 |
| Msa1276890 | Msa1306560 | 0.800503 | 1.398203e-48 | -8.615850e-47 |
| Msa1276890 | Msa1308870 | 0.807454 | 5.015459e-50 | -8.615850e-47 |
| Msa1276890 | Msa1313140 | 0.818398 | 2.001352e-52 | -8.615850e-47 |
| Msa1276890 | Msa1313320 | 0.826717 | 2.327814e-54 | -8.615850e-47 |
| Msa1276890 | Msa1319800 | 0.801535 | 8.600500e-49 | -8.615850e-47 |
| Msa1276890 | Msa1327680 | 0.808872 | 2.501279e-50 | -8.615850e-47 |
| Msa1276890 | Msa1327980 | 0.824376 | 8.349430e-54 | -8.615850e-47 |
| Msa1276890 | Msa1328040 | 0.835884 | 1.293774e-56 | -8.615850e-47 |
| Msa1276890 | Msa1331000 | 0.807362 | 5.245256e-50 | -8.615850e-47 |
| Msa1276890 | Msa1341520 | 0.800334 | 1.513121e-48 | -8.615850e-47 |
| Msa1276890 | Msa1345220 | 0.823350 | 1.452472e-53 | -8.615850e-47 |
| Msa1276890 | Msa1346370 | 0.812749 | 3.625741e-51 | -8.615850e-47 |
| Msa1276890 | Msa1348890 | 0.813681 | 2.262796e-51 | -8.615850e-47 |
| Msa1276890 | Msa1350880 | 0.803906 | 2.786809e-49 | -8.615850e-47 |
| Msa1276890 | Msa1353470 | 0.825098 | 5.640309e-54 | -8.615850e-47 |
| Msa1276890 | Msa1353980 | 0.800131 | 1.664208e-48 | -8.615850e-47 |
| Msa1276890 | Msa1366220 | 0.809102 | 2.233430e-50 | -8.615850e-47 |
| Msa1276890 | Msa1366810 | 0.839364 | 1.656115e-57 | -8.615850e-47 |
| Msa1276890 | Msa1366970 | 0.820209 | 7.742115e-53 | -8.615850e-47 |
| Msa1276890 | Msa1370070 | -0.834354 | 3.146891e-56 | -8.615850e-47 |
| Msa1276890 | Msa1372760 | 0.820115 | 8.134530e-53 | -8.615850e-47 |
| Msa1276890 | Msa1375380 | 0.810681 | 1.021616e-50 | -8.615850e-47 |
| Msa1276890 | Msa1379500 | 0.807247 | 5.547293e-50 | -8.615850e-47 |
| Msa1276890 | Msa1388510 | 0.819927 | 8.980016e-53 | -8.615850e-47 |
| Msa1276890 | Msa1388970 | 0.810092 | 1.369070e-50 | -8.615850e-47 |
| Msa1276890 | Msa1390700 | 0.804899 | 1.730985e-49 | -8.615850e-47 |
| Msa1276890 | Msa1392910 | 0.801804 | 7.573830e-49 | -8.615850e-47 |
| Msa1276890 | Msa1395900 | 0.849555 | 3.000510e-60 | -8.615850e-47 |
| Msa1276890 | Msa1395910 | 0.826071 | 3.317509e-54 | -8.615850e-47 |
| Msa1276890 | Msa1397860 | 0.802454 | 5.566969e-49 | -8.615850e-47 |
| Msa1276890 | Msa1402730 | 0.826096 | 3.271419e-54 | -8.615850e-47 |
| Msa1276890 | Msa1402790 | 0.801612 | 8.293877e-49 | -8.615850e-47 |
| Msa1276890 | Msa1404020 | 0.823729 | 1.183904e-53 | -8.615850e-47 |
| Msa1276890 | Msa1410680 | 0.814312 | 1.642709e-51 | -8.615850e-47 |
| Msa1276890 | Msa1412530 | 0.841463 | 4.681395e-58 | -8.615850e-47 |
| Msa1276890 | Msa1412640 | 0.824394 | 8.264770e-54 | -8.615850e-47 |
| Msa1276890 | Msa1423870 | 0.811595 | 6.472108e-51 | -8.615850e-47 |
| Msa1276890 | Msa1427230 | 0.812810 | 3.514476e-51 | -8.615850e-47 |
| Msa1276890 | Msa1444440 | 0.801126 | 1.043223e-48 | -8.615850e-47 |
| Msa1276890 | Msa1449340 | -0.809950 | 1.468658e-50 | -8.615850e-47 |
| Msa1276890 | Msa1451620 | -0.801029 | 1.091548e-48 | -8.615850e-47 |
| Msa1276890 | Msa1458750 | 0.828632 | 8.070147e-55 | -8.615850e-47 |
| Msa1276890 | Msa1460830 | 0.809647 | 1.706670e-50 | -8.615850e-47 |
| Msa1276890 | Msa1461300 | 0.814986 | 1.165158e-51 | -8.615850e-47 |
| Msa1276890 | Msa1466540 | 0.831492 | 1.618643e-55 | -8.615850e-47 |
| Msa0367870 | Msa1276890 | 0.808826 | 2.558536e-50 | -8.615850e-47 |
| Msa0381610 | Msa1276890 | -0.806137 | 9.520162e-50 | -8.615850e-47 |
| Msa0385840 | Msa1276890 | 0.806229 | 9.103028e-50 | -8.615850e-47 |
| Msa0388950 | Msa1276890 | 0.816624 | 5.025071e-52 | -8.615850e-47 |
| Msa0391430 | Msa1276890 | 0.827186 | 1.797341e-54 | -8.615850e-47 |
| Msa0393080 | Msa1276890 | 0.812848 | 3.449198e-51 | -8.615850e-47 |
| Msa0395790 | Msa1276890 | 0.818648 | 1.756374e-52 | -8.615850e-47 |
| Msa0397750 | Msa1276890 | 0.800443 | 1.437515e-48 | -8.615850e-47 |
| Msa0402290 | Msa1276890 | 0.816271 | 6.028076e-52 | -8.615850e-47 |
| Msa0402790 | Msa1276890 | 0.810295 | 1.237778e-50 | -8.615850e-47 |
| Msa0405130 | Msa1276890 | 0.807425 | 5.086365e-50 | -8.615850e-47 |
| Msa0411390 | Msa1276890 | 0.801441 | 8.990363e-49 | -8.615850e-47 |
| Msa0413410 | Msa1276890 | 0.849183 | 3.808469e-60 | -8.615850e-47 |
| Msa0416650 | Msa1276890 | 0.835976 | 1.226032e-56 | -8.615850e-47 |
| Msa0422100 | Msa1276890 | 0.809245 | 2.080923e-50 | -8.615850e-47 |
| Msa0424320 | Msa1276890 | 0.845879 | 3.083297e-59 | -8.615850e-47 |
| Msa0425790 | Msa1276890 | 0.840234 | 9.829838e-58 | -8.615850e-47 |
| Msa0430420 | Msa1276890 | 0.818454 | 1.944044e-52 | -8.615850e-47 |
| Msa0434180 | Msa1276890 | 0.808176 | 3.522765e-50 | -8.615850e-47 |
| Msa0436780 | Msa1276890 | 0.801234 | 9.914021e-49 | -8.615850e-47 |
| Msa0440750 | Msa1276890 | 0.813473 | 2.515054e-51 | -8.615850e-47 |
| Msa0443260 | Msa1276890 | 0.801490 | 8.785952e-49 | -8.615850e-47 |
| Msa0444750 | Msa1276890 | -0.825167 | 5.432697e-54 | -8.615850e-47 |
| Msa0452710 | Msa1276890 | 0.810424 | 1.160873e-50 | -8.615850e-47 |
| Msa0453350 | Msa1276890 | 0.807171 | 5.756704e-50 | -8.615850e-47 |
| Msa0455760 | Msa1276890 | 0.819127 | 1.367423e-52 | -8.615850e-47 |
| Msa0457960 | Msa1276890 | 0.801184 | 1.014890e-48 | -8.615850e-47 |
| Msa0464680 | Msa1276890 | 0.809268 | 2.058149e-50 | -8.615850e-47 |
| Msa0467640 | Msa1276890 | -0.808635 | 2.810651e-50 | -8.615850e-47 |
| Msa0473270 | Msa1276890 | 0.815370 | 9.570809e-52 | -8.615850e-47 |
| Msa0479340 | Msa1276890 | 0.819743 | 9.895945e-53 | -8.615850e-47 |
| Msa0980880 | Msa1276890 | 0.800032 | 1.743477e-48 | -8.615850e-47 |
| Msa0989620 | Msa1276890 | 0.808094 | 3.667439e-50 | -8.615850e-47 |
| Msa0993730 | Msa1276890 | 0.803090 | 4.115768e-49 | -8.615850e-47 |
| Msa0997370 | Msa1276890 | 0.841503 | 4.567421e-58 | -8.615850e-47 |
| Msa0998690 | Msa1276890 | 0.843471 | 1.373177e-58 | -8.615850e-47 |
| Msa0999120 | Msa1276890 | 0.812867 | 3.416403e-51 | -8.615850e-47 |
| Msa0999870 | Msa1276890 | 0.810253 | 1.263721e-50 | -8.615850e-47 |
| Msa1000890 | Msa1276890 | 0.836643 | 8.295912e-57 | -8.615850e-47 |
| Msa1000900 | Msa1276890 | 0.820811 | 5.632078e-53 | -8.615850e-47 |
| Msa1001390 | Msa1276890 | 0.809455 | 1.876490e-50 | -8.615850e-47 |
| Msa1002000 | Msa1276890 | 0.833467 | 5.244819e-56 | -8.615850e-47 |
| Msa1002850 | Msa1276890 | 0.808591 | 2.872810e-50 | -8.615850e-47 |
| Msa1003620 | Msa1276890 | 0.837626 | 4.650696e-57 | -8.615850e-47 |
| Msa1009070 | Msa1276890 | 0.827593 | 1.435896e-54 | -8.615850e-47 |
| Msa1012830 | Msa1276890 | 0.801123 | 1.044590e-48 | -8.615850e-47 |
| Msa1014540 | Msa1276890 | 0.842517 | 2.464304e-58 | -8.615850e-47 |
| Msa1015490 | Msa1276890 | 0.824231 | 9.027730e-54 | -8.615850e-47 |
| Msa1018980 | Msa1276890 | 0.810174 | 1.313906e-50 | -8.615850e-47 |
| Msa1019000 | Msa1276890 | 0.808308 | 3.301627e-50 | -8.615850e-47 |
| Msa1030970 | Msa1276890 | 0.824299 | 8.702655e-54 | -8.615850e-47 |
| Msa1036610 | Msa1276890 | 0.807888 | 4.055908e-50 | -8.615850e-47 |
| Msa1037420 | Msa1276890 | 0.817859 | 2.650542e-52 | -8.615850e-47 |
| Msa1045200 | Msa1276890 | 0.804186 | 2.437808e-49 | -8.615850e-47 |
| Msa1046460 | Msa1276890 | 0.813075 | 3.074993e-51 | -8.615850e-47 |
| Msa1053720 | Msa1276890 | 0.816522 | 5.294396e-52 | -8.615850e-47 |
| Msa1058710 | Msa1276890 | 0.820510 | 6.604593e-53 | -8.615850e-47 |
| Msa1064710 | Msa1276890 | 0.811163 | 8.032350e-51 | -8.615850e-47 |
| Msa1069220 | Msa1276890 | 0.818078 | 2.364758e-52 | -8.615850e-47 |
| Msa1075220 | Msa1276890 | -0.821992 | 3.006709e-53 | -8.615850e-47 |
| Msa1075540 | Msa1276890 | 0.841236 | 5.369455e-58 | -8.615850e-47 |
| Msa1075650 | Msa1276890 | 0.809800 | 1.582016e-50 | -8.615850e-47 |
| Msa1083840 | Msa1276890 | 0.802535 | 5.358621e-49 | -8.615850e-47 |
| Msa1085740 | Msa1276890 | 0.821625 | 3.655186e-53 | -8.615850e-47 |
| Msa1088530 | Msa1276890 | 0.800565 | 1.357550e-48 | -8.615850e-47 |
| Msa1100050 | Msa1276890 | 0.824183 | 9.266739e-54 | -8.615850e-47 |
| Msa1104090 | Msa1276890 | 0.814801 | 1.280357e-51 | -8.615850e-47 |
| Msa0251320 | Msa1276890 | 0.818745 | 1.669791e-52 | -8.615850e-47 |
| Msa0251640 | Msa1276890 | 0.836200 | 1.075777e-56 | -8.615850e-47 |
| Msa0267370 | Msa1276890 | 0.800963 | 1.126425e-48 | -8.615850e-47 |
| Msa0270500 | Msa1276890 | 0.809722 | 1.644176e-50 | -8.615850e-47 |
| Msa0275000 | Msa1276890 | 0.816354 | 5.775542e-52 | -8.615850e-47 |
| Msa0278110 | Msa1276890 | 0.804888 | 1.740104e-49 | -8.615850e-47 |
| Msa0280090 | Msa1276890 | 0.809024 | 2.321727e-50 | -8.615850e-47 |
| Msa0288100 | Msa1276890 | 0.800798 | 1.216999e-48 | -8.615850e-47 |
| Msa0296480 | Msa1276890 | 0.810299 | 1.235363e-50 | -8.615850e-47 |
| Msa0305190 | Msa1276890 | 0.810063 | 1.388886e-50 | -8.615850e-47 |
| Msa0310750 | Msa1276890 | 0.825438 | 4.688055e-54 | -8.615850e-47 |
| Msa0319170 | Msa1276890 | 0.825745 | 3.965124e-54 | -8.615850e-47 |
| Msa0321310 | Msa1276890 | 0.809738 | 1.631142e-50 | -8.615850e-47 |
| Msa0322360 | Msa1276890 | 0.801383 | 9.240484e-49 | -8.615850e-47 |
| Msa0330340 | Msa1276890 | 0.810247 | 1.267123e-50 | -8.615850e-47 |
| Msa0336320 | Msa1276890 | 0.811087 | 8.343063e-51 | -8.615850e-47 |
| Msa0338490 | Msa1276890 | 0.809080 | 2.257642e-50 | -8.615850e-47 |
| Msa0339620 | Msa1276890 | 0.804516 | 2.080709e-49 | -8.615850e-47 |
| Msa0340470 | Msa1276890 | 0.807949 | 3.936002e-50 | -8.615850e-47 |
| Msa0342750 | Msa1276890 | 0.837019 | 6.652127e-57 | -8.615850e-47 |
| Msa0343850 | Msa1276890 | 0.831909 | 1.277509e-55 | -8.615850e-47 |
| Msa0345970 | Msa1276890 | 0.807541 | 4.806377e-50 | -8.615850e-47 |
| Msa0355220 | Msa1276890 | 0.814371 | 1.593717e-51 | -8.615850e-47 |
| Msa0359030 | Msa1276890 | 0.810365 | 1.195247e-50 | -8.615850e-47 |
| Msa0363790 | Msa1276890 | 0.807605 | 4.659342e-50 | -8.615850e-47 |
| Msa1108690 | Msa1276890 | 0.808102 | 3.652807e-50 | -8.615850e-47 |
| Msa1109680 | Msa1276890 | 0.806254 | 8.992838e-50 | -8.615850e-47 |
| Msa1111870 | Msa1276890 | 0.809535 | 1.803723e-50 | -8.615850e-47 |
| Msa1113170 | Msa1276890 | 0.828995 | 6.592212e-55 | -8.615850e-47 |
| Msa1115100 | Msa1276890 | 0.815000 | 1.156494e-51 | -8.615850e-47 |
| Msa1118330 | Msa1276890 | 0.813661 | 2.286438e-51 | -8.615850e-47 |
| Msa1119480 | Msa1276890 | 0.814171 | 1.764340e-51 | -8.615850e-47 |
| Msa1120610 | Msa1276890 | 0.807829 | 4.174885e-50 | -8.615850e-47 |
| Msa1121480 | Msa1276890 | 0.825576 | 4.348252e-54 | -8.615850e-47 |
| Msa1121490 | Msa1276890 | 0.857998 | 1.113703e-62 | -8.615850e-47 |
| Msa1135470 | Msa1276890 | 0.800373 | 1.485484e-48 | -8.615850e-47 |
| Msa1137570 | Msa1276890 | 0.869975 | 2.068274e-66 | -8.615850e-47 |
| Msa1139000 | Msa1276890 | -0.801931 | 7.132873e-49 | -8.615850e-47 |
| Msa1142020 | Msa1276890 | 0.800137 | 1.659615e-48 | -8.615850e-47 |
| Msa1142670 | Msa1276890 | 0.813504 | 2.475337e-51 | -8.615850e-47 |
| Msa1147710 | Msa1276890 | 0.807084 | 6.007748e-50 | -8.615850e-47 |
| Msa1148000 | Msa1276890 | 0.824023 | 1.010316e-53 | -8.615850e-47 |
| Msa1152100 | Msa1276890 | 0.808062 | 3.724913e-50 | -8.615850e-47 |
| Msa1154280 | Msa1276890 | 0.828681 | 7.853872e-55 | -8.615850e-47 |
| Msa1156020 | Msa1276890 | 0.824224 | 9.064761e-54 | -8.615850e-47 |
| Msa1162550 | Msa1276890 | -0.806437 | 8.230217e-50 | -8.615850e-47 |
| Msa1162780 | Msa1276890 | 0.810534 | 1.098674e-50 | -8.615850e-47 |
| Msa1167340 | Msa1276890 | 0.815064 | 1.119158e-51 | -8.615850e-47 |
| Msa1174040 | Msa1276890 | 0.823087 | 1.673187e-53 | -8.615850e-47 |
| Msa1174910 | Msa1276890 | 0.941221 | 6.064653e-101 | -8.615850e-47 |
| Msa1181250 | Msa1276890 | 0.802825 | 4.667663e-49 | -8.615850e-47 |
| Msa1181330 | Msa1276890 | 0.802897 | 4.511478e-49 | -8.615850e-47 |
| Msa1181910 | Msa1276890 | 0.820650 | 6.133310e-53 | -8.615850e-47 |
| Msa1184420 | Msa1276890 | 0.817972 | 2.499335e-52 | -8.615850e-47 |
| Msa1186950 | Msa1276890 | -0.823933 | 1.060908e-53 | -8.615850e-47 |
| Msa1188710 | Msa1276890 | 0.802864 | 4.583203e-49 | -8.615850e-47 |
| Msa1194160 | Msa1276890 | 0.802441 | 5.601872e-49 | -8.615850e-47 |
| Msa1210020 | Msa1276890 | 0.824007 | 1.019186e-53 | -8.615850e-47 |
| Msa1213520 | Msa1276890 | 0.828788 | 7.399588e-55 | -8.615850e-47 |
| Msa0490140 | Msa1276890 | 0.813557 | 2.409786e-51 | -8.615850e-47 |
| Msa0493250 | Msa1276890 | 0.810930 | 9.024200e-51 | -8.615850e-47 |
| Msa0498360 | Msa1276890 | 0.804418 | 2.180612e-49 | -8.615850e-47 |
| Msa0502880 | Msa1276890 | 0.808198 | 3.484706e-50 | -8.615850e-47 |
| Msa0509900 | Msa1276890 | 0.819424 | 1.169870e-52 | -8.615850e-47 |
| Msa0512750 | Msa1276890 | 0.846808 | 1.721019e-59 | -8.615850e-47 |
| Msa0514070 | Msa1276890 | -0.808154 | 3.560773e-50 | -8.615850e-47 |
| Msa0519000 | Msa1276890 | 0.804476 | 2.121271e-49 | -8.615850e-47 |
| Msa0523940 | Msa1276890 | 0.837433 | 5.212372e-57 | -8.615850e-47 |
| Msa0529040 | Msa1276890 | 0.832226 | 1.066505e-55 | -8.615850e-47 |
| Msa0529890 | Msa1276890 | 0.801358 | 9.351374e-49 | -8.615850e-47 |
| Msa0530940 | Msa1276890 | 0.803656 | 3.141879e-49 | -8.615850e-47 |
| Msa0545700 | Msa1276890 | 0.851338 | 9.471968e-61 | -8.615850e-47 |
| Msa0547320 | Msa1276890 | 0.821036 | 4.999417e-53 | -8.615850e-47 |
| Msa0548920 | Msa1276890 | 0.820123 | 8.100735e-53 | -8.615850e-47 |
| Msa0562440 | Msa1276890 | 0.834346 | 3.161135e-56 | -8.615850e-47 |
| Msa0569220 | Msa1276890 | 0.808598 | 2.862247e-50 | -8.615850e-47 |
| Msa0585230 | Msa1276890 | 0.826065 | 3.328236e-54 | -8.615850e-47 |
| Msa0594560 | Msa1276890 | 0.814197 | 1.741488e-51 | -8.615850e-47 |
| Msa0598780 | Msa1276890 | 0.819599 | 1.067307e-52 | -8.615850e-47 |
| Msa0602390 | Msa1276890 | 0.819598 | 1.067887e-52 | -8.615850e-47 |
| Msa0844420 | Msa1276890 | 0.815675 | 8.185278e-52 | -8.615850e-47 |
| Msa0844450 | Msa1276890 | 0.805880 | 1.078061e-49 | -8.615850e-47 |
| Msa0844490 | Msa1276890 | 0.866762 | 2.248715e-65 | -8.615850e-47 |
| Msa0844570 | Msa1276890 | 0.819897 | 9.122853e-53 | -8.615850e-47 |
| Msa0848990 | Msa1276890 | 0.804158 | 2.470874e-49 | -8.615850e-47 |
| Msa0849030 | Msa1276890 | 0.848272 | 6.811518e-60 | -8.615850e-47 |
| Msa0850880 | Msa1276890 | 0.800820 | 1.204275e-48 | -8.615850e-47 |
| Msa0857640 | Msa1276890 | 0.810944 | 8.958428e-51 | -8.615850e-47 |
| Msa0857680 | Msa1276890 | 0.802560 | 5.295142e-49 | -8.615850e-47 |
| Msa0861130 | Msa1276890 | 0.820306 | 7.355838e-53 | -8.615850e-47 |
| Msa0871270 | Msa1276890 | 0.815789 | 7.722019e-52 | -8.615850e-47 |
| Msa0875290 | Msa1276890 | 0.804405 | 2.194781e-49 | -8.615850e-47 |
| Msa0876190 | Msa1276890 | 0.808902 | 2.465140e-50 | -8.615850e-47 |
| Msa0877250 | Msa1276890 | 0.864041 | 1.617563e-64 | -8.615850e-47 |
| Msa0885280 | Msa1276890 | 0.800624 | 1.320856e-48 | -8.615850e-47 |
| Msa0897330 | Msa1276890 | 0.839823 | 1.258104e-57 | -8.615850e-47 |
| Msa0898750 | Msa1276890 | 0.807617 | 4.631137e-50 | -8.615850e-47 |
| Msa0899430 | Msa1276890 | 0.839755 | 1.310509e-57 | -8.615850e-47 |
| Msa0899450 | Msa1276890 | 0.829017 | 6.510782e-55 | -8.615850e-47 |
| Msa0899980 | Msa1276890 | 0.822758 | 1.995736e-53 | -8.615850e-47 |
| Msa0900910 | Msa1276890 | 0.800581 | 1.347385e-48 | -8.615850e-47 |
| Msa0901070 | Msa1276890 | 0.831037 | 2.094565e-55 | -8.615850e-47 |
| Msa0903620 | Msa1276890 | 0.805569 | 1.253238e-49 | -8.615850e-47 |
| Msa0907260 | Msa1276890 | 0.833183 | 6.172321e-56 | -8.615850e-47 |
| Msa0907950 | Msa1276890 | 0.851509 | 8.472329e-61 | -8.615850e-47 |
| Msa0907960 | Msa1276890 | 0.826229 | 3.041543e-54 | -8.615850e-47 |
| Msa0910660 | Msa1276890 | 0.803494 | 3.394052e-49 | -8.615850e-47 |
| Msa0914760 | Msa1276890 | 0.812441 | 4.232325e-51 | -8.615850e-47 |
| Msa0924050 | Msa1276890 | 0.800721 | 1.262100e-48 | -8.615850e-47 |
| Msa0925250 | Msa1276890 | 0.814154 | 1.779842e-51 | -8.615850e-47 |
| Msa0925290 | Msa1276890 | 0.825547 | 4.416449e-54 | -8.615850e-47 |
| Msa0926890 | Msa1276890 | 0.809764 | 1.610097e-50 | -8.615850e-47 |
| Msa0927380 | Msa1276890 | 0.851427 | 8.937856e-61 | -8.615850e-47 |
| Msa0928130 | Msa1276890 | 0.815047 | 1.129321e-51 | -8.615850e-47 |
| Msa0934890 | Msa1276890 | 0.806685 | 7.294578e-50 | -8.615850e-47 |
| Msa0936300 | Msa1276890 | 0.840998 | 6.202213e-58 | -8.615850e-47 |
| Msa0938220 | Msa1276890 | 0.814078 | 1.850617e-51 | -8.615850e-47 |
| Msa0940520 | Msa1276890 | 0.800242 | 1.580236e-48 | -8.615850e-47 |
| Msa0942200 | Msa1276890 | 0.837440 | 5.191014e-57 | -8.615850e-47 |
| Msa0943190 | Msa1276890 | 0.800622 | 1.322239e-48 | -8.615850e-47 |
| Msa0947660 | Msa1276890 | 0.839944 | 1.169882e-57 | -8.615850e-47 |
| Msa0948320 | Msa1276890 | 0.810786 | 9.692674e-51 | -8.615850e-47 |
| Msa0953120 | Msa1276890 | 0.831697 | 1.440767e-55 | -8.615850e-47 |
| Msa0956270 | Msa1276890 | 0.824816 | 6.574983e-54 | -8.615850e-47 |
| Msa0958550 | Msa1276890 | 0.835262 | 1.859092e-56 | -8.615850e-47 |
| Msa0961980 | Msa1276890 | 0.820552 | 6.457203e-53 | -8.615850e-47 |
| Msa0964900 | Msa1276890 | 0.837757 | 4.304353e-57 | -8.615850e-47 |
| Msa0965360 | Msa1276890 | 0.812640 | 3.830519e-51 | -8.615850e-47 |
| Msa0966750 | Msa1276890 | 0.833969 | 3.930207e-56 | -8.615850e-47 |
| Msa0969520 | Msa1276890 | 0.837774 | 4.263111e-57 | -8.615850e-47 |
| Msa0969600 | Msa1276890 | 0.805995 | 1.019595e-49 | -8.615850e-47 |
| Msa0969730 | Msa1276890 | 0.819990 | 8.689189e-53 | -8.615850e-47 |
| Msa0969810 | Msa1276890 | 0.852746 | 3.770708e-61 | -8.615850e-47 |
| Msa0973100 | Msa1276890 | 0.840089 | 1.072500e-57 | -8.615850e-47 |
| Msa0974070 | Msa1276890 | 0.812199 | 4.781469e-51 | -8.615850e-47 |
| Msa0974080 | Msa1276890 | 0.845458 | 4.011654e-59 | -8.615850e-47 |
| Msa0976670 | Msa1276890 | 0.834594 | 2.738841e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276890 | MtrunA17_Chr8g0344851 | 82.967 | 182 | 27 | 1 | 141 | 318 | 5 | 186 | 6.02e-103 | 299 |
| Msa1276890 | MtrunA17_Chr4g0061881 | 66.471 | 170 | 48 | 4 | 141 | 301 | 423 | 592 | 1.46e-55 | 191 |
| Msa1276890 | MtrunA17_Chr8g0344821 | 73.913 | 115 | 26 | 1 | 197 | 307 | 2 | 116 | 1.87e-52 | 168 |
| Msa1276890 | MtrunA17_Chr2g0307851 | 62.353 | 170 | 55 | 4 | 141 | 301 | 435 | 604 | 9.45e-51 | 178 |
| Msa1276890 | MtrunA17_Chr4g0064001 | 66.434 | 143 | 41 | 3 | 160 | 301 | 2 | 138 | 1.09e-48 | 162 |
| Msa1276890 | MtrunA17_Chr4g0061831 | 79.710 | 69 | 14 | 0 | 229 | 297 | 48 | 116 | 9.46e-32 | 115 |
| Msa1276890 | MtrunA17_Chr4g0073621 | 79.661 | 59 | 10 | 1 | 242 | 298 | 1 | 59 | 1.43e-25 | 97.4 |
| Msa1276890 | MtrunA17_Chr3g0143931 | 43.333 | 150 | 49 | 5 | 2 | 117 | 342 | 489 | 6.21e-25 | 105 |
| Msa1276890 | MtrunA17_Chr5g0437451 | 70.312 | 64 | 16 | 1 | 234 | 294 | 85 | 148 | 1.54e-22 | 92.0 |
| Msa1276890 | MtrunA17_Chr5g0408341 | 61.429 | 70 | 25 | 1 | 247 | 314 | 1 | 70 | 1.34e-19 | 83.6 |
| Msa1276890 | MtrunA17_Chr5g0437391 | 45.865 | 133 | 45 | 5 | 140 | 269 | 192 | 300 | 2.60e-19 | 87.0 |
| Msa1276890 | MtrunA17_Chr4g0069081 | 54.286 | 70 | 32 | 0 | 229 | 298 | 8 | 77 | 1.04e-18 | 80.1 |
| Msa1276890 | MtrunA17_Chr4g0076561 | 40.000 | 115 | 52 | 2 | 141 | 255 | 89 | 186 | 2.51e-16 | 75.9 |
| Msa1276890 | MtrunA17_Chr5g0448641 | 63.043 | 46 | 17 | 0 | 46 | 91 | 431 | 476 | 5.82e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276890 | AT1G73990.1 | 57.647 | 170 | 63 | 4 | 141 | 301 | 441 | 610 | 5.04e-45 | 162 |
| Msa1276890 | AT1G73990.2 | 47.788 | 113 | 50 | 4 | 141 | 244 | 441 | 553 | 8.94e-15 | 75.5 |
Find 71 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAAACAACAGGGTTCTTC+TGG | 0.189314 | 8_3:-11844894 | Msa1276890:CDS |
| AGGAATATTGGCCTTCAATT+TGG | 0.198279 | 8_3:+11844695 | None:intergenic |
| GCAGAAAACCTTACCTTAAC+TGG | 0.249629 | 8_3:-11845014 | Msa1276890:CDS |
| TTGAGTGGTGTATAATATTA+AGG | 0.252125 | 8_3:+11845148 | None:intergenic |
| AGGTTGCACAAGGGAGGATT+TGG | 0.320673 | 8_3:-11844788 | Msa1276890:CDS |
| GATGCACATCCAATATTTAC+AGG | 0.344035 | 8_3:-11847092 | Msa1276890:CDS |
| CTTACCTTAACTGGTTCAAT+TGG | 0.346263 | 8_3:-11845005 | Msa1276890:CDS |
| ATTAGATACTGCATCTTTAC+CGG | 0.371656 | 8_3:+11844764 | None:intergenic |
| GGGCAGTCACCTGTAAATAT+TGG | 0.373481 | 8_3:+11847083 | None:intergenic |
| TATAAGCTCTGGGTGGGACT+TGG | 0.382520 | 8_3:-11846691 | Msa1276890:CDS |
| ACATGATCTGGAACTGTTGC+TGG | 0.385137 | 8_3:+11845881 | None:intergenic |
| TTGAAGATGCTTCACAAAAC+AGG | 0.397394 | 8_3:-11847154 | Msa1276890:CDS |
| GCTCCGTGCTGCTAAACAAC+AGG | 0.399282 | 8_3:-11844904 | Msa1276890:CDS |
| CACTCCAATTGAACCAGTTA+AGG | 0.399513 | 8_3:+11845001 | None:intergenic |
| AGCAGGTGGTATTTCTAATC+TGG | 0.402766 | 8_3:-11845123 | Msa1276890:CDS |
| TGGTTCAATTGGAGTGGACT+TGG | 0.406136 | 8_3:-11844994 | Msa1276890:CDS |
| TACATACGACTCTTTGCAAA+TGG | 0.420475 | 8_3:+11844870 | None:intergenic |
| CCAGCTACACTTATAAGCTC+TGG | 0.431707 | 8_3:-11846702 | Msa1276890:CDS |
| CTAAACAACAGGGTTCTTCT+GGG | 0.433656 | 8_3:-11844893 | Msa1276890:CDS |
| TATTGCTTCGATGTCTGATC+TGG | 0.439624 | 8_3:-11845084 | Msa1276890:CDS |
| TCGATGTCTGATCTGGCAAC+AGG | 0.445511 | 8_3:-11845077 | Msa1276890:CDS |
| GCAGGATACTACGTGGCAAC+AGG | 0.447978 | 8_3:-11845053 | Msa1276890:CDS |
| ATGTCAGTATTACTGCTAGA+TGG | 0.451288 | 8_3:+11845813 | None:intergenic |
| ACCTGTTCAATTCTGTAAAA+CGG | 0.459984 | 8_3:+11846622 | None:intergenic |
| GGTATTTCTAATCTGGCAAC+AGG | 0.465104 | 8_3:-11845116 | Msa1276890:CDS |
| TTGTGATATCCACCATCATC+TGG | 0.467543 | 8_3:+11844927 | None:intergenic |
| AGATGCAGTATCTAATGGTT+TGG | 0.468066 | 8_3:-11844757 | Msa1276890:CDS |
| AAACTGAAGCCATTGCAATC+AGG | 0.468127 | 8_3:-11845773 | Msa1276890:intron |
| GGTAAAGATGCAGTATCTAA+TGG | 0.470828 | 8_3:-11844762 | Msa1276890:CDS |
| CTTGTCTACAGTCATTGATC+TGG | 0.472479 | 8_3:+11844818 | None:intergenic |
| GATGTACTATTTACATGATC+TGG | 0.474263 | 8_3:+11845869 | None:intergenic |
| ATAAGCTCTGGGTGGGACTT+GGG | 0.489703 | 8_3:-11846690 | Msa1276890:CDS |
| CCAGAGCTTATAAGTGTAGC+TGG | 0.500367 | 8_3:+11846702 | None:intergenic |
| TCTAATCTGGCAACAGGCGC+AGG | 0.506218 | 8_3:-11845110 | Msa1276890:CDS |
| ATCAATGACTGTAGACAAGT+TGG | 0.507353 | 8_3:-11844814 | Msa1276890:CDS |
| TATTGCTATAGCCAAATTGA+AGG | 0.515312 | 8_3:-11844706 | Msa1276890:CDS |
| CAATTGAACCAGTTAAGGTA+AGG | 0.517196 | 8_3:+11845006 | None:intergenic |
| TCTGATCTGGCAACAGGCGC+AGG | 0.521213 | 8_3:-11845071 | Msa1276890:CDS |
| CTTAACTGGTTCAATTGGAG+TGG | 0.529399 | 8_3:-11845000 | Msa1276890:CDS |
| TACAATAACCCTTAAAACCA+CGG | 0.534470 | 8_3:+11844631 | None:intergenic |
| TACTACGTGGCAACAGGCGC+AGG | 0.540589 | 8_3:-11845047 | Msa1276890:CDS |
| GGTTCAATTGGAGTGGACTT+GGG | 0.542242 | 8_3:-11844993 | Msa1276890:CDS |
| CAGCTACACTTATAAGCTCT+GGG | 0.549173 | 8_3:-11846701 | Msa1276890:CDS |
| GACTGTAGACAAGTTGGAAG+AGG | 0.555043 | 8_3:-11844808 | Msa1276890:CDS |
| AACCCTGTTGTTTAGCAGCA+CGG | 0.568819 | 8_3:+11844901 | None:intergenic |
| AATGGTTTGGTTGATGCTAT+CGG | 0.570525 | 8_3:-11844744 | Msa1276890:CDS |
| TTGAAAGAAAATCCAGATGA+TGG | 0.570725 | 8_3:-11844939 | Msa1276890:CDS |
| AAACAGACAGGTTACTATTG+TGG | 0.574519 | 8_3:-11844670 | Msa1276890:CDS |
| ATATTTACAGGTGACTGCCC+AGG | 0.575398 | 8_3:-11847080 | Msa1276890:intron |
| CAATATTCCTCAAAACAGAC+AGG | 0.577643 | 8_3:-11844682 | Msa1276890:CDS |
| CTTAAAACCACGGGAAGAGT+AGG | 0.580092 | 8_3:+11844641 | None:intergenic |
| ACAATAACCCTTAAAACCAC+GGG | 0.587325 | 8_3:+11844632 | None:intergenic |
| TACACTTATAAGCTCTGGGT+GGG | 0.595495 | 8_3:-11846697 | Msa1276890:CDS |
| TGGAAGAGGTTGCACAAGGG+AGG | 0.596294 | 8_3:-11844794 | Msa1276890:CDS |
| AAGTTGGAAGAGGTTGCACA+AGG | 0.604460 | 8_3:-11844798 | Msa1276890:CDS |
| TAAACAATTTCGAGATGATG+CGG | 0.607766 | 8_3:-11844847 | Msa1276890:CDS |
| GAGCTCTCCTACTCTTCCCG+TGG | 0.608108 | 8_3:-11844648 | Msa1276890:CDS |
| TTATACACCACTCAACAAGC+AGG | 0.627229 | 8_3:-11845140 | Msa1276890:CDS |
| CTCCGTGCTGCTAAACAACA+GGG | 0.630059 | 8_3:-11844903 | Msa1276890:CDS |
| TTGCATCAACCTGATTGCAA+TGG | 0.630090 | 8_3:+11845764 | None:intergenic |
| AAAGAAAATCCAGATGATGG+TGG | 0.630987 | 8_3:-11844936 | Msa1276890:CDS |
| GCACAAGGGAGGATTTGGAC+CGG | 0.632737 | 8_3:-11844783 | Msa1276890:CDS |
| GGTTTGGTTGATGCTATCGG+TGG | 0.655797 | 8_3:-11844741 | Msa1276890:CDS |
| ATACAACTATCAGTTGTGCA+AGG | 0.660458 | 8_3:-11847125 | Msa1276890:CDS |
| AATACCACCTGCTTGTTGAG+TGG | 0.671018 | 8_3:+11845133 | None:intergenic |
| TCGTTGAATATAATAACTAG+AGG | 0.680638 | 8_3:-11844596 | None:intergenic |
| TACACCACTCAACAAGCAGG+TGG | 0.691418 | 8_3:-11845137 | Msa1276890:CDS |
| CTACACTTATAAGCTCTGGG+TGG | 0.694587 | 8_3:-11846698 | Msa1276890:CDS |
| AGTTGGAAGAGGTTGCACAA+GGG | 0.695276 | 8_3:-11844797 | Msa1276890:CDS |
| AGTTGTGCAAGGATACACAT+CGG | 0.736237 | 8_3:-11847114 | Msa1276890:CDS |
| AACAGGCGCAGGATACTACG+TGG | 0.781709 | 8_3:-11845060 | Msa1276890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCATTTTATGGATTTAATA+AGG | - | chr8_3:11844864-11844883 | Msa1276890:CDS | 15.0% |
| !!! | GTATTTGAGTTTAAAATTTA+TGG | + | chr8_3:11844906-11844925 | None:intergenic | 15.0% |
| !! | AATAAAATGAGAAATTCATA+AGG | + | chr8_3:11845244-11845263 | None:intergenic | 15.0% |
| !!! | TAATTTAATGATTTTCCTTA+AGG | - | chr8_3:11845397-11845416 | Msa1276890:intron | 15.0% |
| !!! | AATTTAATGATTTTCCTTAA+GGG | - | chr8_3:11845398-11845417 | Msa1276890:intron | 15.0% |
| !! | GGTAAATCATTAAATTAAAA+GGG | + | chr8_3:11845600-11845619 | None:intergenic | 15.0% |
| !! | AGGTAAATCATTAAATTAAA+AGG | + | chr8_3:11845601-11845620 | None:intergenic | 15.0% |
| !!! | CTTTTTTTAATTTCAATTCT+TGG | + | chr8_3:11845918-11845937 | None:intergenic | 15.0% |
| !! | CAAGAATTGAAATTAAAAAA+AGG | - | chr8_3:11845916-11845935 | Msa1276890:intron | 15.0% |
| !! | AATGATAAGTACAAAACAAT+GGG | + | chr8_3:11844850-11844869 | None:intergenic | 20.0% |
| !! | AAATGATAAGTACAAAACAA+TGG | + | chr8_3:11844851-11844870 | None:intergenic | 20.0% |
| !!! | GTTTTGTACTTATCATTTTA+TGG | - | chr8_3:11844853-11844872 | Msa1276890:CDS | 20.0% |
| !!! | ATTTTATGGATTTAATAAGG+TGG | - | chr8_3:11844867-11844886 | Msa1276890:CDS | 20.0% |
| !!! | AGTTTAAAATTTATGGTTCA+TGG | + | chr8_3:11844899-11844918 | None:intergenic | 20.0% |
| !! | AAATACACTACAAAAATTCA+TGG | - | chr8_3:11844920-11844939 | Msa1276890:CDS | 20.0% |
| !!! | TATTTCTATGCATAATTACA+TGG | - | chr8_3:11845311-11845330 | Msa1276890:intron | 20.0% |
| !!! | ATTTAATGATTTTCCTTAAG+GGG | - | chr8_3:11845399-11845418 | Msa1276890:intron | 20.0% |
| !! | AATAAGCAAATATAACAATC+GGG | + | chr8_3:11846440-11846459 | None:intergenic | 20.0% |
| !! | GAATAAGCAAATATAACAAT+CGG | + | chr8_3:11846441-11846460 | None:intergenic | 20.0% |
| !! | TATTGTATTTCGGTTATATT+AGG | - | chr8_3:11846563-11846582 | Msa1276890:intron | 20.0% |
| ! | CTATAGTCAAATATAGAACA+AGG | + | chr8_3:11845020-11845039 | None:intergenic | 25.0% |
| !! | TTTATCTTTTACGAAGATTG+GGG | + | chr8_3:11845192-11845211 | None:intergenic | 25.0% |
| !! | GTTTATCTTTTACGAAGATT+GGG | + | chr8_3:11845193-11845212 | None:intergenic | 25.0% |
| !! | AGTTTATCTTTTACGAAGAT+TGG | + | chr8_3:11845194-11845213 | None:intergenic | 25.0% |
| !!! | ATAATTACATGGTTTTTCAG+AGG | - | chr8_3:11845322-11845341 | Msa1276890:intron | 25.0% |
| !! | TTTAATGATTTTCCTTAAGG+GGG | - | chr8_3:11845400-11845419 | Msa1276890:intron | 25.0% |
| ! | ATTTATCTTGTTAATTGACG+CGG | - | chr8_3:11845835-11845854 | Msa1276890:CDS | 25.0% |
| !! | ATGTAGGGAAAATGAATTTT+CGG | + | chr8_3:11846241-11846260 | None:intergenic | 25.0% |
| !! | GCTTATTCATGTTTTATGTT+AGG | - | chr8_3:11846453-11846472 | Msa1276890:intron | 25.0% |
| !! | TCATGTTTTATGTTAGGAAT+CGG | - | chr8_3:11846459-11846478 | Msa1276890:intron | 25.0% |
| ! | TACGGTGACTTAAAAAAAAA+AGG | - | chr8_3:11846496-11846515 | Msa1276890:intron | 25.0% |
| ! | ACGGTGACTTAAAAAAAAAA+GGG | - | chr8_3:11846497-11846516 | Msa1276890:intron | 25.0% |
| ! | TTGAGTGGTGTATAATATTA+AGG | + | chr8_3:11846615-11846634 | None:intergenic | 25.0% |
| !! | AAATCAATCTTTTCATTCTC+AGG | + | chr8_3:11846803-11846822 | None:intergenic | 25.0% |
| CAAAAATTCATGGACAAAGA+AGG | - | chr8_3:11844930-11844949 | Msa1276890:CDS | 30.0% | |
| CTGTTATTGTTATGCTTTAG+TGG | - | chr8_3:11844965-11844984 | Msa1276890:CDS | 30.0% | |
| ACCTGTTCAATTCTGTAAAA+CGG | + | chr8_3:11845141-11845160 | None:intergenic | 30.0% | |
| ATGAGAAATTCATAAGGCAA+AGG | + | chr8_3:11845238-11845257 | None:intergenic | 30.0% | |
| TTCCTTGTCTAGTGTAAAAA+AGG | - | chr8_3:11845275-11845294 | Msa1276890:intron | 30.0% | |
| TCCTTGTCTAGTGTAAAAAA+GGG | - | chr8_3:11845276-11845295 | Msa1276890:intron | 30.0% | |
| CTACAAACAAGTTTGTCAAT+AGG | + | chr8_3:11845358-11845377 | None:intergenic | 30.0% | |
| ! | TTTTGGCAAAGAATGCATTA+AGG | + | chr8_3:11845621-11845640 | None:intergenic | 30.0% |
| TTGACTCATGTTGCATAATA+CGG | + | chr8_3:11845778-11845797 | None:intergenic | 30.0% | |
| GATGTACTATTTACATGATC+TGG | + | chr8_3:11845894-11845913 | None:intergenic | 30.0% | |
| CAAAAAATAACTATACCTGC+AGG | + | chr8_3:11846107-11846126 | None:intergenic | 30.0% | |
| !!! | CTGCAGGTATAGTTATTTTT+TGG | - | chr8_3:11846105-11846124 | Msa1276890:intron | 30.0% |
| GAGAACTTGAATTCATTTCA+TGG | - | chr8_3:11846130-11846149 | Msa1276890:intron | 30.0% | |
| AATTGTGTCTTCCTAATTGA+CGG | - | chr8_3:11846199-11846218 | Msa1276890:intron | 30.0% | |
| ! | TGTAGGGAAAATGAATTTTC+GGG | + | chr8_3:11846240-11846259 | None:intergenic | 30.0% |
| AACATCATCAGAGATATGTA+GGG | + | chr8_3:11846256-11846275 | None:intergenic | 30.0% | |
| TTAAAAAAAAAAGGGCAGTC+CGG | - | chr8_3:11846505-11846524 | Msa1276890:intron | 30.0% | |
| CTGACTTTGGTATTGTATTT+CGG | - | chr8_3:11846553-11846572 | Msa1276890:intron | 30.0% | |
| TTGAAAGAAAATCCAGATGA+TGG | - | chr8_3:11846821-11846840 | Msa1276890:intron | 30.0% | |
| TAAACAATTTCGAGATGATG+CGG | - | chr8_3:11846913-11846932 | Msa1276890:intron | 30.0% | |
| ATTAGATACTGCATCTTTAC+CGG | + | chr8_3:11846999-11847018 | None:intergenic | 30.0% | |
| TATTGCTATAGCCAAATTGA+AGG | - | chr8_3:11847054-11847073 | Msa1276890:intron | 30.0% | |
| TACAATAACCCTTAAAACCA+CGG | + | chr8_3:11847132-11847151 | None:intergenic | 30.0% | |
| TTGAAGATGCTTCACAAAAC+AGG | - | chr8_3:11844606-11844625 | Msa1276890:CDS | 35.0% | |
| ATACAACTATCAGTTGTGCA+AGG | - | chr8_3:11844635-11844654 | Msa1276890:CDS | 35.0% | |
| GATGCACATCCAATATTTAC+AGG | - | chr8_3:11844668-11844687 | Msa1276890:CDS | 35.0% | |
| ATAGCTATTCTACTTTGTCC+AGG | - | chr8_3:11844733-11844752 | Msa1276890:CDS | 35.0% | |
| TCCAGGTCTAATCAGAATAA+AGG | - | chr8_3:11844750-11844769 | Msa1276890:CDS | 35.0% | |
| ACCTTTATTCTGATTAGACC+TGG | + | chr8_3:11844754-11844773 | None:intergenic | 35.0% | |
| TCAGAATAAAGGTTGAGACT+CGG | - | chr8_3:11844761-11844780 | Msa1276890:CDS | 35.0% | |
| ! | AAGCTATGTGATACCTTTTC+AGG | + | chr8_3:11844787-11844806 | None:intergenic | 35.0% |
| GTTATGCTTTAGTGGTTACA+CGG | - | chr8_3:11844973-11844992 | Msa1276890:CDS | 35.0% | |
| ! | TCCGTTTTACAGAATTGAAC+AGG | - | chr8_3:11845137-11845156 | Msa1276890:CDS | 35.0% |
| !!! | TCCCTTTTTTACACTAGACA+AGG | + | chr8_3:11845280-11845299 | None:intergenic | 35.0% |
| !!! | CATACCCTGTTTTTTTACAC+AGG | + | chr8_3:11845497-11845516 | None:intergenic | 35.0% |
| CTGTGTAAAAAAACAGGGTA+TGG | - | chr8_3:11845495-11845514 | Msa1276890:intron | 35.0% | |
| GGAGCTTAATTATAATGCAC+CGG | - | chr8_3:11845570-11845589 | Msa1276890:intron | 35.0% | |
| GAGCTTAATTATAATGCACC+GGG | - | chr8_3:11845571-11845590 | Msa1276890:intron | 35.0% | |
| ATTAAATTAAAAGGGCAGCC+CGG | + | chr8_3:11845592-11845611 | None:intergenic | 35.0% | |
| ACAAGACTCAAGACTGTTTA+GGG | + | chr8_3:11845694-11845713 | None:intergenic | 35.0% | |
| ATGTCAGTATTACTGCTAGA+TGG | + | chr8_3:11845950-11845969 | None:intergenic | 35.0% | |
| CAAGCCAGAATAATTAGCAT+GGG | + | chr8_3:11846022-11846041 | None:intergenic | 35.0% | |
| TCAAGCCAGAATAATTAGCA+TGG | + | chr8_3:11846023-11846042 | None:intergenic | 35.0% | |
| !! | TGCTAATTATTCTGGCTTGA+TGG | - | chr8_3:11846023-11846042 | Msa1276890:intron | 35.0% |
| GTGGTTTCATATAGATGTCT+TGG | + | chr8_3:11846056-11846075 | None:intergenic | 35.0% | |
| !! | ACTTTGAAGTACCGTCAATT+AGG | + | chr8_3:11846213-11846232 | None:intergenic | 35.0% |
| TAATTGACGGTACTTCAAAG+TGG | - | chr8_3:11846212-11846231 | Msa1276890:intron | 35.0% | |
| CAACATCATCAGAGATATGT+AGG | + | chr8_3:11846257-11846276 | None:intergenic | 35.0% | |
| ! | GCTCAACAATTTTCTTGTGT+GGG | - | chr8_3:11846338-11846357 | Msa1276890:intron | 35.0% |
| ! | CTCAACAATTTTCTTGTGTG+GGG | - | chr8_3:11846339-11846358 | Msa1276890:intron | 35.0% |
| AAGTCAGATATTACACACTC+TGG | + | chr8_3:11846540-11846559 | None:intergenic | 35.0% | |
| GAGTGTGTAATATCTGACTT+TGG | - | chr8_3:11846540-11846559 | Msa1276890:intron | 35.0% | |
| CAATTGAACCAGTTAAGGTA+AGG | + | chr8_3:11846757-11846776 | None:intergenic | 35.0% | |
| ! | CTTACCTTAACTGGTTCAAT+TGG | - | chr8_3:11846755-11846774 | Msa1276890:intron | 35.0% |
| ! | AAAGAAAATCCAGATGATGG+TGG | - | chr8_3:11846824-11846843 | Msa1276890:intron | 35.0% |
| TACATACGACTCTTTGCAAA+TGG | + | chr8_3:11846893-11846912 | None:intergenic | 35.0% | |
| ATCAATGACTGTAGACAAGT+TGG | - | chr8_3:11846946-11846965 | Msa1276890:intron | 35.0% | |
| GGTAAAGATGCAGTATCTAA+TGG | - | chr8_3:11846998-11847017 | Msa1276890:intron | 35.0% | |
| AGATGCAGTATCTAATGGTT+TGG | - | chr8_3:11847003-11847022 | Msa1276890:intron | 35.0% | |
| !! | AATGGTTTGGTTGATGCTAT+CGG | - | chr8_3:11847016-11847035 | Msa1276890:intron | 35.0% |
| !! | AGGAATATTGGCCTTCAATT+TGG | + | chr8_3:11847068-11847087 | None:intergenic | 35.0% |
| !!! | CTGTCTGTTTTGAGGAATAT+TGG | + | chr8_3:11847080-11847099 | None:intergenic | 35.0% |
| CAATATTCCTCAAAACAGAC+AGG | - | chr8_3:11847078-11847097 | Msa1276890:intron | 35.0% | |
| ! | ATAGTAACCTGTCTGTTTTG+AGG | + | chr8_3:11847088-11847107 | None:intergenic | 35.0% |
| AAACAGACAGGTTACTATTG+TGG | - | chr8_3:11847090-11847109 | Msa1276890:CDS | 35.0% | |
| ACAATAACCCTTAAAACCAC+GGG | + | chr8_3:11847131-11847150 | None:intergenic | 35.0% | |
| AGTTGTGCAAGGATACACAT+CGG | - | chr8_3:11844646-11844665 | Msa1276890:CDS | 40.0% | |
| ! | TATGGTCTTGGCTTCATCTT+TGG | - | chr8_3:11844708-11844727 | Msa1276890:CDS | 40.0% |
| CAGCTACACTTATAAGCTCT+GGG | - | chr8_3:11845059-11845078 | Msa1276890:CDS | 40.0% | |
| !! | TACACTTATAAGCTCTGGGT+GGG | - | chr8_3:11845063-11845082 | Msa1276890:CDS | 40.0% |
| ! | AATGATTTTCCTTAAGGGGG+AGG | - | chr8_3:11845403-11845422 | Msa1276890:intron | 40.0% |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr8_3:11845443-11845462 | Msa1276890:intron | 40.0% | |
| AGCCTCCTGTGTAAAAAAAC+AGG | - | chr8_3:11845489-11845508 | Msa1276890:intron | 40.0% | |
| GCCTCCTGTGTAAAAAAACA+GGG | - | chr8_3:11845490-11845509 | Msa1276890:intron | 40.0% | |
| !!! | ACCCTGTTTTTTTACACAGG+AGG | + | chr8_3:11845494-11845513 | None:intergenic | 40.0% |
| ! | TTCGTCGCTTCATGTCTTTT+TGG | + | chr8_3:11845638-11845657 | None:intergenic | 40.0% |
| GACAAGACTCAAGACTGTTT+AGG | + | chr8_3:11845695-11845714 | None:intergenic | 40.0% | |
| !! | CGGAATAGTGTTGACTTGTT+GGG | + | chr8_3:11845758-11845777 | None:intergenic | 40.0% |
| !! | ACGGAATAGTGTTGACTTGT+TGG | + | chr8_3:11845759-11845778 | None:intergenic | 40.0% |
| AAACTGAAGCCATTGCAATC+AGG | - | chr8_3:11845987-11846006 | Msa1276890:intron | 40.0% | |
| TTGCATCAACCTGATTGCAA+TGG | + | chr8_3:11845999-11846018 | None:intergenic | 40.0% | |
| GCAACCCATGCTAATTATTC+TGG | - | chr8_3:11846015-11846034 | Msa1276890:intron | 40.0% | |
| GCAGCACAATATTTGTCTAG+TGG | + | chr8_3:11846075-11846094 | None:intergenic | 40.0% | |
| ! | GGCTCAACAATTTTCTTGTG+TGG | - | chr8_3:11846337-11846356 | Msa1276890:intron | 40.0% |
| !! | GGGTATATCCAGAAGCATTT+GGG | - | chr8_3:11846359-11846378 | Msa1276890:intron | 40.0% |
| TCGGACATCGTATCTGTTTA+CGG | - | chr8_3:11846478-11846497 | Msa1276890:intron | 40.0% | |
| !! | CACACTCTGGAACTTAAAAC+CGG | + | chr8_3:11846527-11846546 | None:intergenic | 40.0% |
| TTATACACCACTCAACAAGC+AGG | - | chr8_3:11846620-11846639 | Msa1276890:intron | 40.0% | |
| ! | AGCAGGTGGTATTTCTAATC+TGG | - | chr8_3:11846637-11846656 | Msa1276890:CDS | 40.0% |
| ! | GGTATTTCTAATCTGGCAAC+AGG | - | chr8_3:11846644-11846663 | Msa1276890:CDS | 40.0% |
| TATTGCTTCGATGTCTGATC+TGG | - | chr8_3:11846676-11846695 | Msa1276890:CDS | 40.0% | |
| GCAGAAAACCTTACCTTAAC+TGG | - | chr8_3:11846746-11846765 | Msa1276890:intron | 40.0% | |
| CACTCCAATTGAACCAGTTA+AGG | + | chr8_3:11846762-11846781 | None:intergenic | 40.0% | |
| ! | CTTAACTGGTTCAATTGGAG+TGG | - | chr8_3:11846760-11846779 | Msa1276890:intron | 40.0% |
| TTGTGATATCCACCATCATC+TGG | + | chr8_3:11846836-11846855 | None:intergenic | 40.0% | |
| CTAAACAACAGGGTTCTTCT+GGG | - | chr8_3:11846867-11846886 | Msa1276890:intron | 40.0% | |
| CTTGTCTACAGTCATTGATC+TGG | + | chr8_3:11846945-11846964 | None:intergenic | 40.0% | |
| !!! | TACTCTTCCCGTGGTTTTAA+GGG | - | chr8_3:11847121-11847140 | Msa1276890:CDS | 40.0% |
| GGGCAGTCACCTGTAAATAT+TGG | + | chr8_3:11844680-11844699 | None:intergenic | 45.0% | |
| ATATTTACAGGTGACTGCCC+AGG | - | chr8_3:11844680-11844699 | Msa1276890:CDS | 45.0% | |
| GCCAAGACCATAATTGACCT+GGG | + | chr8_3:11844700-11844719 | None:intergenic | 45.0% | |
| AGCCAAGACCATAATTGACC+TGG | + | chr8_3:11844701-11844720 | None:intergenic | 45.0% | |
| ACATAGCTTCGATGCTGAGA+AGG | - | chr8_3:11844798-11844817 | Msa1276890:CDS | 45.0% | |
| CCAGAGCTTATAAGTGTAGC+TGG | + | chr8_3:11845061-11845080 | None:intergenic | 45.0% | |
| CCAGCTACACTTATAAGCTC+TGG | - | chr8_3:11845058-11845077 | Msa1276890:CDS | 45.0% | |
| !! | CTACACTTATAAGCTCTGGG+TGG | - | chr8_3:11845062-11845081 | Msa1276890:CDS | 45.0% |
| ! | TTTTCCTTAAGGGGGAGGAT+TGG | - | chr8_3:11845408-11845427 | Msa1276890:intron | 45.0% |
| CGTACGATACACCAAATGGT+GGG | - | chr8_3:11845521-11845540 | Msa1276890:intron | 45.0% | |
| ! | AGACTGTTTAGGGTGGATAC+TGG | + | chr8_3:11845684-11845703 | None:intergenic | 45.0% |
| AGACTCAAGACTGTTTAGGG+TGG | + | chr8_3:11845691-11845710 | None:intergenic | 45.0% | |
| ! | ACATGATCTGGAACTGTTGC+TGG | + | chr8_3:11845882-11845901 | None:intergenic | 45.0% |
| GTCTGCTTTAACGATGTGCA+AGG | + | chr8_3:11846288-11846307 | None:intergenic | 45.0% | |
| !! | GGGGTATATCCAGAAGCATT+TGG | - | chr8_3:11846358-11846377 | Msa1276890:intron | 45.0% |
| ! | AATACCACCTGCTTGTTGAG+TGG | + | chr8_3:11846630-11846649 | None:intergenic | 45.0% |
| ! | TGGTTCAATTGGAGTGGACT+TGG | - | chr8_3:11846766-11846785 | Msa1276890:intron | 45.0% |
| ! | GGTTCAATTGGAGTGGACTT+GGG | - | chr8_3:11846767-11846786 | Msa1276890:intron | 45.0% |
| ! | AACCCTGTTGTTTAGCAGCA+CGG | + | chr8_3:11846862-11846881 | None:intergenic | 45.0% |
| GCTAAACAACAGGGTTCTTC+TGG | - | chr8_3:11846866-11846885 | Msa1276890:intron | 45.0% | |
| ! | GACTGTAGACAAGTTGGAAG+AGG | - | chr8_3:11846952-11846971 | Msa1276890:intron | 45.0% |
| AAGTTGGAAGAGGTTGCACA+AGG | - | chr8_3:11846962-11846981 | Msa1276890:intron | 45.0% | |
| AGTTGGAAGAGGTTGCACAA+GGG | - | chr8_3:11846963-11846982 | Msa1276890:intron | 45.0% | |
| CTTAAAACCACGGGAAGAGT+AGG | + | chr8_3:11847122-11847141 | None:intergenic | 45.0% | |
| !! | CTACTCTTCCCGTGGTTTTA+AGG | - | chr8_3:11847120-11847139 | Msa1276890:CDS | 45.0% |
| GTGACTGCCCAGGTCAATTA+TGG | - | chr8_3:11844690-11844709 | Msa1276890:CDS | 50.0% | |
| GCCCAGGTCAATTATGGTCT+TGG | - | chr8_3:11844696-11844715 | Msa1276890:CDS | 50.0% | |
| !! | TATAAGCTCTGGGTGGGACT+TGG | - | chr8_3:11845069-11845088 | Msa1276890:CDS | 50.0% |
| !! | ATAAGCTCTGGGTGGGACTT+GGG | - | chr8_3:11845070-11845089 | Msa1276890:CDS | 50.0% |
| AAGGTCACGTGTTCAAGTCC+TGG | - | chr8_3:11845462-11845481 | Msa1276890:intron | 50.0% | |
| ! | TTACACAGGAGGCTGTTTCC+AGG | + | chr8_3:11845483-11845502 | None:intergenic | 50.0% |
| GCTGCGTACGATACACCAAA+TGG | - | chr8_3:11845517-11845536 | Msa1276890:intron | 50.0% | |
| GCGTACGATACACCAAATGG+TGG | - | chr8_3:11845520-11845539 | Msa1276890:intron | 50.0% | |
| TTGCCAAACCAGCTGCTTCT+TGG | - | chr8_3:11846316-11846335 | Msa1276890:intron | 50.0% | |
| TTGTTGAGCCAAGAAGCAGC+TGG | + | chr8_3:11846327-11846346 | None:intergenic | 50.0% | |
| !! | ATCCAGAAGCATTTGGGTGC+TGG | - | chr8_3:11846365-11846384 | Msa1276890:intron | 50.0% |
| TACACCACTCAACAAGCAGG+TGG | - | chr8_3:11846623-11846642 | Msa1276890:intron | 50.0% | |
| TCGATGTCTGATCTGGCAAC+AGG | - | chr8_3:11846683-11846702 | Msa1276890:CDS | 50.0% | |
| ! | CTCCGTGCTGCTAAACAACA+GGG | - | chr8_3:11846857-11846876 | Msa1276890:intron | 50.0% |
| AGGTTGCACAAGGGAGGATT+TGG | - | chr8_3:11846972-11846991 | Msa1276890:intron | 50.0% | |
| ! | GGTTTGGTTGATGCTATCGG+TGG | - | chr8_3:11847019-11847038 | Msa1276890:intron | 50.0% |
| GGTTGAGACTCGGCCTGAAA+AGG | - | chr8_3:11844771-11844790 | Msa1276890:CDS | 55.0% | |
| CATATGCAGAGTCCGGGAAG+GGG | + | chr8_3:11845548-11845567 | None:intergenic | 55.0% | |
| GCATATGCAGAGTCCGGGAA+GGG | + | chr8_3:11845549-11845568 | None:intergenic | 55.0% | |
| CTTCCCGGACTCTGCATATG+CGG | - | chr8_3:11845548-11845567 | Msa1276890:intron | 55.0% | |
| TTCCCGGACTCTGCATATGC+GGG | - | chr8_3:11845549-11845568 | Msa1276890:intron | 55.0% | |
| GAGCCAAGAAGCAGCTGGTT+TGG | + | chr8_3:11846322-11846341 | None:intergenic | 55.0% | |
| CACCAGCACCCAAATGCTTC+TGG | + | chr8_3:11846370-11846389 | None:intergenic | 55.0% | |
| !! | CAGAAGCATTTGGGTGCTGG+TGG | - | chr8_3:11846368-11846387 | Msa1276890:intron | 55.0% |
| TCTAATCTGGCAACAGGCGC+AGG | - | chr8_3:11846650-11846669 | Msa1276890:CDS | 55.0% | |
| AACAGGCGCAGGATACTACG+TGG | - | chr8_3:11846700-11846719 | Msa1276890:CDS | 55.0% | |
| GCAGGATACTACGTGGCAAC+AGG | - | chr8_3:11846707-11846726 | Msa1276890:CDS | 55.0% | |
| ! | GCTCCGTGCTGCTAAACAAC+AGG | - | chr8_3:11846856-11846875 | Msa1276890:intron | 55.0% |
| TGGAAGAGGTTGCACAAGGG+AGG | - | chr8_3:11846966-11846985 | Msa1276890:intron | 55.0% | |
| GCACAAGGGAGGATTTGGAC+CGG | - | chr8_3:11846977-11846996 | Msa1276890:intron | 55.0% | |
| TGCGCCAATCCTCCCCCTTA+AGG | + | chr8_3:11845415-11845434 | None:intergenic | 60.0% | |
| ! | AAGGGGGAGGATTGGCGCAT+CGG | - | chr8_3:11845416-11845435 | Msa1276890:intron | 60.0% |
| !! | CAAATGGTGGGTCCCCTTCC+CGG | - | chr8_3:11845533-11845552 | Msa1276890:intron | 60.0% |
| CGCATATGCAGAGTCCGGGA+AGG | + | chr8_3:11845550-11845569 | None:intergenic | 60.0% | |
| CTCCCGCATATGCAGAGTCC+GGG | + | chr8_3:11845554-11845573 | None:intergenic | 60.0% | |
| GCTCCCGCATATGCAGAGTC+CGG | + | chr8_3:11845555-11845574 | None:intergenic | 60.0% | |
| TGCTGCTCAATGCGTCCTGC+AGG | - | chr8_3:11846089-11846108 | Msa1276890:intron | 60.0% | |
| !! | GCATTTGGGTGCTGGTGGTC+AGG | - | chr8_3:11846373-11846392 | Msa1276890:intron | 60.0% |
| TCTGATCTGGCAACAGGCGC+AGG | - | chr8_3:11846689-11846708 | Msa1276890:CDS | 60.0% | |
| TACTACGTGGCAACAGGCGC+AGG | - | chr8_3:11846713-11846732 | Msa1276890:CDS | 60.0% | |
| GAGCTCTCCTACTCTTCCCG+TGG | - | chr8_3:11847112-11847131 | Msa1276890:CDS | 60.0% | |
| CGGGAAGGGGACCCACCATT+TGG | + | chr8_3:11845535-11845554 | None:intergenic | 65.0% | |
| !! | TGGGTGCTGGTGGTCAGGTC+TGG | - | chr8_3:11846378-11846397 | Msa1276890:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 11844599 | 11847183 | 11844599 | ID=Msa1276890;Name=Msa1276890 |
| chr8_3 | mRNA | 11844599 | 11847183 | 11844599 | ID=Msa1276890-mRNA-1;Parent=Msa1276890;Name=Msa1276890-mRNA-1;_AED=0.28;_eAED=0.31;_QI=0|0.33|0.25|1|1|1|4|0|318 |
| chr8_3 | exon | 11847081 | 11847183 | 11847081 | ID=Msa1276890-mRNA-1:exon:4810;Parent=Msa1276890-mRNA-1 |
| chr8_3 | exon | 11846624 | 11846742 | 11846624 | ID=Msa1276890-mRNA-1:exon:4809;Parent=Msa1276890-mRNA-1 |
| chr8_3 | exon | 11845774 | 11845909 | 11845774 | ID=Msa1276890-mRNA-1:exon:4808;Parent=Msa1276890-mRNA-1 |
| chr8_3 | exon | 11844599 | 11845197 | 11844599 | ID=Msa1276890-mRNA-1:exon:4807;Parent=Msa1276890-mRNA-1 |
| chr8_3 | CDS | 11847081 | 11847183 | 11847081 | ID=Msa1276890-mRNA-1:cds;Parent=Msa1276890-mRNA-1 |
| chr8_3 | CDS | 11846624 | 11846742 | 11846624 | ID=Msa1276890-mRNA-1:cds;Parent=Msa1276890-mRNA-1 |
| chr8_3 | CDS | 11845774 | 11845909 | 11845774 | ID=Msa1276890-mRNA-1:cds;Parent=Msa1276890-mRNA-1 |
| chr8_3 | CDS | 11844599 | 11845197 | 11844599 | ID=Msa1276890-mRNA-1:cds;Parent=Msa1276890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
