Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0079180 | XP_003590940.1 | 99.595 | 247 | 1 | 0 | 1 | 247 | 1 | 247 | 0.0 | 508 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0079180 | sp|Q7SXW4|EMC3_DANRE | 43.373 | 249 | 131 | 4 | 1 | 244 | 1 | 244 | 7.21e-68 | 213 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0079180 | G7I684 | 99.595 | 247 | 1 | 0 | 1 | 247 | 1 | 247 | 0.0 | 508 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007440 | Msa0079180 | 0.809885 | 1.516704e-50 | -8.615850e-47 |
Msa0011170 | Msa0079180 | 0.815335 | 9.743672e-52 | -8.615850e-47 |
Msa0011960 | Msa0079180 | 0.817212 | 3.708276e-52 | -8.615850e-47 |
Msa0020410 | Msa0079180 | 0.805374 | 1.377023e-49 | -8.615850e-47 |
Msa0021510 | Msa0079180 | 0.804544 | 2.052994e-49 | -8.615850e-47 |
Msa0025730 | Msa0079180 | 0.800430 | 1.446892e-48 | -8.615850e-47 |
Msa0032580 | Msa0079180 | 0.810108 | 1.357771e-50 | -8.615850e-47 |
Msa0033110 | Msa0079180 | 0.831789 | 1.367461e-55 | -8.615850e-47 |
Msa0033260 | Msa0079180 | 0.821896 | 3.163252e-53 | -8.615850e-47 |
Msa0037540 | Msa0079180 | -0.800151 | 1.648994e-48 | -8.615850e-47 |
Msa0037570 | Msa0079180 | -0.834254 | 3.333027e-56 | -8.615850e-47 |
Msa0037880 | Msa0079180 | 0.826805 | 2.217281e-54 | -8.615850e-47 |
Msa0040690 | Msa0079180 | 0.801680 | 8.033381e-49 | -8.615850e-47 |
Msa0043660 | Msa0079180 | 0.815162 | 1.064586e-51 | -8.615850e-47 |
Msa0043980 | Msa0079180 | 0.831378 | 1.727369e-55 | -8.615850e-47 |
Msa0044000 | Msa0079180 | 0.833444 | 5.314615e-56 | -8.615850e-47 |
Msa0044260 | Msa0079180 | 0.819749 | 9.862613e-53 | -8.615850e-47 |
Msa0044330 | Msa0079180 | 0.855775 | 5.032186e-62 | -8.615850e-47 |
Msa0054480 | Msa0079180 | 0.814147 | 1.786468e-51 | -8.615850e-47 |
Msa0061080 | Msa0079180 | 0.811808 | 5.816399e-51 | -8.615850e-47 |
Msa0070700 | Msa0079180 | 0.801140 | 1.036318e-48 | -8.615850e-47 |
Msa0078900 | Msa0079180 | 0.828396 | 9.202558e-55 | -8.615850e-47 |
Msa0079110 | Msa0079180 | 0.810604 | 1.061242e-50 | -8.615850e-47 |
Msa0079130 | Msa0079180 | 0.824876 | 6.363519e-54 | -8.615850e-47 |
Msa0079180 | Msa0079230 | 0.802570 | 5.269275e-49 | -8.615850e-47 |
Msa0079180 | Msa0084380 | 0.829147 | 6.057366e-55 | -8.615850e-47 |
Msa0079180 | Msa0089820 | 0.840676 | 7.531936e-58 | -8.615850e-47 |
Msa0079180 | Msa0090550 | 0.806843 | 6.754492e-50 | -8.615850e-47 |
Msa0079180 | Msa0091410 | 0.826262 | 2.988143e-54 | -8.615850e-47 |
Msa0079180 | Msa0104230 | 0.805794 | 1.123763e-49 | -8.615850e-47 |
Msa0079180 | Msa0104240 | 0.823480 | 1.354267e-53 | -8.615850e-47 |
Msa0079180 | Msa0114060 | 0.807115 | 5.916214e-50 | -8.615850e-47 |
Msa0079180 | Msa0115400 | 0.814579 | 1.433865e-51 | -8.615850e-47 |
Msa0079180 | Msa0126610 | 0.819507 | 1.119886e-52 | -8.615850e-47 |
Msa0079180 | Msa0127020 | 0.808623 | 2.828196e-50 | -8.615850e-47 |
Msa0079180 | Msa0127050 | 0.800768 | 1.234332e-48 | -8.615850e-47 |
Msa0079180 | Msa0127800 | 0.821147 | 4.713186e-53 | -8.615850e-47 |
Msa0079180 | Msa0129190 | -0.825896 | 3.649507e-54 | -8.615850e-47 |
Msa0079180 | Msa0131330 | 0.818165 | 2.259686e-52 | -8.615850e-47 |
Msa0079180 | Msa0136070 | 0.811652 | 6.289855e-51 | -8.615850e-47 |
Msa0079180 | Msa0136100 | 0.803021 | 4.252576e-49 | -8.615850e-47 |
Msa0079180 | Msa0137550 | 0.816543 | 5.238556e-52 | -8.615850e-47 |
Msa0079180 | Msa0138020 | 0.802094 | 6.603702e-49 | -8.615850e-47 |
Msa0079180 | Msa0145730 | 0.800507 | 1.395097e-48 | -8.615850e-47 |
Msa0079180 | Msa0147250 | 0.818207 | 2.210497e-52 | -8.615850e-47 |
Msa0079180 | Msa0150230 | 0.809123 | 2.210561e-50 | -8.615850e-47 |
Msa0079180 | Msa0150820 | 0.824239 | 8.990068e-54 | -8.615850e-47 |
Msa0079180 | Msa0160550 | 0.817002 | 4.132161e-52 | -8.615850e-47 |
Msa0079180 | Msa0168230 | 0.800289 | 1.545163e-48 | -8.615850e-47 |
Msa0079180 | Msa0169280 | 0.808386 | 3.177231e-50 | -8.615850e-47 |
Msa0079180 | Msa0169310 | 0.801016 | 1.098390e-48 | -8.615850e-47 |
Msa0079180 | Msa0169370 | 0.829345 | 5.423349e-55 | -8.615850e-47 |
Msa0079180 | Msa0171540 | 0.834413 | 3.040650e-56 | -8.615850e-47 |
Msa0079180 | Msa0172000 | 0.806690 | 7.278982e-50 | -8.615850e-47 |
Msa0079180 | Msa0172970 | 0.801612 | 8.292651e-49 | -8.615850e-47 |
Msa0079180 | Msa0178800 | 0.826901 | 2.102829e-54 | -8.615850e-47 |
Msa0079180 | Msa0178930 | 0.806111 | 9.641660e-50 | -8.615850e-47 |
Msa0079180 | Msa0187250 | 0.802711 | 4.928710e-49 | -8.615850e-47 |
Msa0079180 | Msa0189300 | 0.806824 | 6.819284e-50 | -8.615850e-47 |
Msa0079180 | Msa0189520 | 0.812927 | 3.314507e-51 | -8.615850e-47 |
Msa0079180 | Msa0206010 | 0.801536 | 8.596915e-49 | -8.615850e-47 |
Msa0079180 | Msa0208090 | 0.821375 | 4.175263e-53 | -8.615850e-47 |
Msa0079180 | Msa0217680 | 0.821090 | 4.856097e-53 | -8.615850e-47 |
Msa0079180 | Msa0217700 | 0.802218 | 6.227938e-49 | -8.615850e-47 |
Msa0079180 | Msa0220720 | 0.813737 | 2.199719e-51 | -8.615850e-47 |
Msa0079180 | Msa0222890 | 0.804424 | 2.175174e-49 | -8.615850e-47 |
Msa0079180 | Msa0228070 | 0.836511 | 8.964586e-57 | -8.615850e-47 |
Msa0079180 | Msa0229380 | 0.807237 | 5.574430e-50 | -8.615850e-47 |
Msa0079180 | Msa0236510 | -0.804813 | 1.803879e-49 | -8.615850e-47 |
Msa0079180 | Msa0240890 | 0.803806 | 2.923398e-49 | -8.615850e-47 |
Msa0079180 | Msa0241140 | 0.817774 | 2.769475e-52 | -8.615850e-47 |
Msa0079180 | Msa0241390 | 0.817266 | 3.604668e-52 | -8.615850e-47 |
Msa0079180 | Msa0249560 | 0.805168 | 1.520206e-49 | -8.615850e-47 |
Msa0079180 | Msa0257500 | 0.827177 | 1.806447e-54 | -8.615850e-47 |
Msa0079180 | Msa0260680 | 0.804122 | 2.513914e-49 | -8.615850e-47 |
Msa0079180 | Msa0264150 | 0.813322 | 2.714461e-51 | -8.615850e-47 |
Msa0079180 | Msa0265430 | 0.807665 | 4.522859e-50 | -8.615850e-47 |
Msa0079180 | Msa0267370 | 0.804948 | 1.690618e-49 | -8.615850e-47 |
Msa0079180 | Msa0271530 | 0.828533 | 8.529790e-55 | -8.615850e-47 |
Msa0079180 | Msa0275000 | 0.823140 | 1.625694e-53 | -8.615850e-47 |
Msa0079180 | Msa0279220 | 0.813449 | 2.544946e-51 | -8.615850e-47 |
Msa0079180 | Msa0279240 | 0.828806 | 7.325153e-55 | -8.615850e-47 |
Msa0079180 | Msa0280090 | 0.829762 | 4.293210e-55 | -8.615850e-47 |
Msa0079180 | Msa0287410 | 0.811187 | 7.936976e-51 | -8.615850e-47 |
Msa0079180 | Msa0299870 | 0.835286 | 1.833281e-56 | -8.615850e-47 |
Msa0079180 | Msa0305410 | 0.801209 | 1.003243e-48 | -8.615850e-47 |
Msa0079180 | Msa0309750 | 0.832530 | 8.971243e-56 | -8.615850e-47 |
Msa0079180 | Msa0317940 | 0.802593 | 5.212856e-49 | -8.615850e-47 |
Msa0079180 | Msa0318980 | 0.813916 | 2.008726e-51 | -8.615850e-47 |
Msa0079180 | Msa0319170 | 0.811748 | 5.996067e-51 | -8.615850e-47 |
Msa0079180 | Msa0321310 | 0.838460 | 2.837553e-57 | -8.615850e-47 |
Msa0079180 | Msa0326110 | 0.803988 | 2.679917e-49 | -8.615850e-47 |
Msa0079180 | Msa0326520 | 0.801386 | 9.226910e-49 | -8.615850e-47 |
Msa0079180 | Msa0326750 | 0.817555 | 3.103282e-52 | -8.615850e-47 |
Msa0079180 | Msa0335060 | 0.803133 | 4.031553e-49 | -8.615850e-47 |
Msa0079180 | Msa0340380 | 0.826610 | 2.468081e-54 | -8.615850e-47 |
Msa0079180 | Msa0340470 | 0.817775 | 2.768460e-52 | -8.615850e-47 |
Msa0079180 | Msa0341050 | 0.844070 | 9.490865e-59 | -8.615850e-47 |
Msa0079180 | Msa0342410 | 0.812645 | 3.820157e-51 | -8.615850e-47 |
Msa0079180 | Msa0345350 | 0.827103 | 1.882192e-54 | -8.615850e-47 |
Msa0079180 | Msa0357790 | 0.804680 | 1.923108e-49 | -8.615850e-47 |
Msa0079180 | Msa0357900 | 0.857748 | 1.321085e-62 | -8.615850e-47 |
Msa0079180 | Msa0381610 | -0.802829 | 4.658119e-49 | -8.615850e-47 |
Msa0079180 | Msa0383800 | 0.826832 | 2.184416e-54 | -8.615850e-47 |
Msa0079180 | Msa0385490 | 0.809794 | 1.586388e-50 | -8.615850e-47 |
Msa0079180 | Msa0385580 | 0.820594 | 6.315506e-53 | -8.615850e-47 |
Msa0079180 | Msa0387280 | 0.812429 | 4.258586e-51 | -8.615850e-47 |
Msa0079180 | Msa0388700 | 0.816468 | 5.445019e-52 | -8.615850e-47 |
Msa0079180 | Msa0388950 | 0.844596 | 6.853481e-59 | -8.615850e-47 |
Msa0079180 | Msa0397540 | 0.822285 | 2.570689e-53 | -8.615850e-47 |
Msa0079180 | Msa0411430 | 0.823706 | 1.199090e-53 | -8.615850e-47 |
Msa0079180 | Msa0412840 | 0.829300 | 5.562052e-55 | -8.615850e-47 |
Msa0079180 | Msa0413410 | 0.802531 | 5.367714e-49 | -8.615850e-47 |
Msa0079180 | Msa0416760 | 0.803958 | 2.719129e-49 | -8.615850e-47 |
Msa0079180 | Msa0434180 | 0.826116 | 3.235543e-54 | -8.615850e-47 |
Msa0079180 | Msa0440400 | 0.803609 | 3.212542e-49 | -8.615850e-47 |
Msa0079180 | Msa0452710 | 0.839757 | 1.309234e-57 | -8.615850e-47 |
Msa0079180 | Msa0455760 | 0.801335 | 9.454254e-49 | -8.615850e-47 |
Msa0079180 | Msa0457960 | 0.817638 | 2.972228e-52 | -8.615850e-47 |
Msa0079180 | Msa0460130 | 0.802615 | 5.158960e-49 | -8.615850e-47 |
Msa0079180 | Msa0467380 | 0.833674 | 4.657226e-56 | -8.615850e-47 |
Msa0079180 | Msa0471900 | 0.805664 | 1.196950e-49 | -8.615850e-47 |
Msa0079180 | Msa0476460 | 0.809713 | 1.651469e-50 | -8.615850e-47 |
Msa0079180 | Msa0477130 | -0.810977 | 8.813700e-51 | -8.615850e-47 |
Msa0079180 | Msa0481280 | 0.848587 | 5.574342e-60 | -8.615850e-47 |
Msa0079180 | Msa0481530 | 0.813836 | 2.092199e-51 | -8.615850e-47 |
Msa0079180 | Msa0510930 | 0.813253 | 2.810640e-51 | -8.615850e-47 |
Msa0079180 | Msa0512750 | 0.826417 | 2.744155e-54 | -8.615850e-47 |
Msa0079180 | Msa0518380 | 0.802520 | 5.396818e-49 | -8.615850e-47 |
Msa0079180 | Msa0521740 | 0.810245 | 1.268541e-50 | -8.615850e-47 |
Msa0079180 | Msa0529040 | 0.817420 | 3.328529e-52 | -8.615850e-47 |
Msa0079180 | Msa0529890 | 0.814433 | 1.544646e-51 | -8.615850e-47 |
Msa0079180 | Msa0532990 | 0.807463 | 4.993163e-50 | -8.615850e-47 |
Msa0079180 | Msa0542090 | 0.819037 | 1.432838e-52 | -8.615850e-47 |
Msa0079180 | Msa0542130 | 0.817919 | 2.568596e-52 | -8.615850e-47 |
Msa0079180 | Msa0545700 | 0.820243 | 7.601188e-53 | -8.615850e-47 |
Msa0079180 | Msa0547320 | 0.813739 | 2.197680e-51 | -8.615850e-47 |
Msa0079180 | Msa0548240 | 0.822886 | 1.863045e-53 | -8.615850e-47 |
Msa0079180 | Msa0548920 | 0.822821 | 1.929204e-53 | -8.615850e-47 |
Msa0079180 | Msa0555450 | 0.806984 | 6.306146e-50 | -8.615850e-47 |
Msa0079180 | Msa0562440 | 0.822934 | 1.816251e-53 | -8.615850e-47 |
Msa0079180 | Msa0564390 | 0.823328 | 1.469231e-53 | -8.615850e-47 |
Msa0079180 | Msa0569220 | 0.837187 | 6.025689e-57 | -8.615850e-47 |
Msa0079180 | Msa0572840 | 0.813585 | 2.375943e-51 | -8.615850e-47 |
Msa0079180 | Msa0585230 | 0.811069 | 8.418586e-51 | -8.615850e-47 |
Msa0079180 | Msa0585560 | 0.813801 | 2.129964e-51 | -8.615850e-47 |
Msa0079180 | Msa0592440 | 0.837186 | 6.031874e-57 | -8.615850e-47 |
Msa0079180 | Msa0608160 | 0.814206 | 1.733400e-51 | -8.615850e-47 |
Msa0079180 | Msa0610130 | 0.816962 | 4.219767e-52 | -8.615850e-47 |
Msa0079180 | Msa0610180 | 0.802304 | 5.978267e-49 | -8.615850e-47 |
Msa0079180 | Msa0610430 | 0.823711 | 1.195332e-53 | -8.615850e-47 |
Msa0079180 | Msa0615490 | 0.800869 | 1.177379e-48 | -8.615850e-47 |
Msa0079180 | Msa0615710 | 0.809400 | 1.927952e-50 | -8.615850e-47 |
Msa0079180 | Msa0617640 | 0.845628 | 3.607172e-59 | -8.615850e-47 |
Msa0079180 | Msa0620960 | 0.808152 | 3.564183e-50 | -8.615850e-47 |
Msa0079180 | Msa0625720 | 0.810656 | 1.034316e-50 | -8.615850e-47 |
Msa0079180 | Msa0631350 | 0.800050 | 1.728845e-48 | -8.615850e-47 |
Msa0079180 | Msa0633440 | 0.832242 | 1.056926e-55 | -8.615850e-47 |
Msa0079180 | Msa0641670 | 0.807801 | 4.232805e-50 | -8.615850e-47 |
Msa0079180 | Msa0643350 | 0.801359 | 9.347954e-49 | -8.615850e-47 |
Msa0079180 | Msa0648080 | 0.817217 | 3.698228e-52 | -8.615850e-47 |
Msa0079180 | Msa0649490 | 0.849045 | 4.160291e-60 | -8.615850e-47 |
Msa0079180 | Msa0659400 | 0.807252 | 5.534734e-50 | -8.615850e-47 |
Msa0079180 | Msa0661650 | 0.812027 | 5.212046e-51 | -8.615850e-47 |
Msa0079180 | Msa0663390 | 0.817161 | 3.806802e-52 | -8.615850e-47 |
Msa0079180 | Msa0663920 | 0.814010 | 1.915523e-51 | -8.615850e-47 |
Msa0079180 | Msa0672450 | 0.812281 | 4.588396e-51 | -8.615850e-47 |
Msa0079180 | Msa0672550 | 0.805493 | 1.299743e-49 | -8.615850e-47 |
Msa0079180 | Msa0672690 | 0.813490 | 2.493657e-51 | -8.615850e-47 |
Msa0079180 | Msa0673630 | 0.813639 | 2.312232e-51 | -8.615850e-47 |
Msa0079180 | Msa0679530 | 0.816129 | 6.483633e-52 | -8.615850e-47 |
Msa0079180 | Msa0688480 | 0.804367 | 2.234712e-49 | -8.615850e-47 |
Msa0079180 | Msa0689260 | 0.827659 | 1.384961e-54 | -8.615850e-47 |
Msa0079180 | Msa0692040 | -0.803812 | 2.915817e-49 | -8.615850e-47 |
Msa0079180 | Msa0692360 | 0.805596 | 1.236869e-49 | -8.615850e-47 |
Msa0079180 | Msa0692830 | 0.814280 | 1.669753e-51 | -8.615850e-47 |
Msa0079180 | Msa0692950 | 0.808679 | 2.751268e-50 | -8.615850e-47 |
Msa0079180 | Msa0701010 | 0.806358 | 8.550769e-50 | -8.615850e-47 |
Msa0079180 | Msa0703780 | 0.800533 | 1.378295e-48 | -8.615850e-47 |
Msa0079180 | Msa0707250 | 0.827545 | 1.474891e-54 | -8.615850e-47 |
Msa0079180 | Msa0711780 | 0.815451 | 9.185470e-52 | -8.615850e-47 |
Msa0079180 | Msa0715700 | 0.831976 | 1.229912e-55 | -8.615850e-47 |
Msa0079180 | Msa0716840 | 0.800913 | 1.153035e-48 | -8.615850e-47 |
Msa0079180 | Msa0721280 | 0.807183 | 5.725512e-50 | -8.615850e-47 |
Msa0079180 | Msa0731940 | 0.813189 | 2.903604e-51 | -8.615850e-47 |
Msa0079180 | Msa0751850 | 0.821410 | 4.097509e-53 | -8.615850e-47 |
Msa0079180 | Msa0765180 | 0.800803 | 1.214194e-48 | -8.615850e-47 |
Msa0079180 | Msa0773180 | 0.801221 | 9.974014e-49 | -8.615850e-47 |
Msa0079180 | Msa0784380 | 0.801116 | 1.048145e-48 | -8.615850e-47 |
Msa0079180 | Msa0790660 | -0.818132 | 2.299247e-52 | -8.615850e-47 |
Msa0079180 | Msa0794670 | 0.800950 | 1.133109e-48 | -8.615850e-47 |
Msa0079180 | Msa0804230 | 0.809369 | 1.958176e-50 | -8.615850e-47 |
Msa0079180 | Msa0810220 | 0.802063 | 6.702585e-49 | -8.615850e-47 |
Msa0079180 | Msa0817460 | 0.822932 | 1.817547e-53 | -8.615850e-47 |
Msa0079180 | Msa0820850 | 0.848691 | 5.216329e-60 | -8.615850e-47 |
Msa0079180 | Msa0831850 | 0.811453 | 6.948602e-51 | -8.615850e-47 |
Msa0079180 | Msa0832150 | 0.808942 | 2.416451e-50 | -8.615850e-47 |
Msa0079180 | Msa0841100 | 0.809331 | 1.994867e-50 | -8.615850e-47 |
Msa0079180 | Msa0849030 | 0.821383 | 4.158178e-53 | -8.615850e-47 |
Msa0079180 | Msa0860030 | -0.831395 | 1.710198e-55 | -8.615850e-47 |
Msa0079180 | Msa0861130 | 0.843329 | 1.498463e-58 | -8.615850e-47 |
Msa0079180 | Msa0876810 | 0.814965 | 1.177524e-51 | -8.615850e-47 |
Msa0079180 | Msa0880020 | 0.802826 | 4.666496e-49 | -8.615850e-47 |
Msa0079180 | Msa0902830 | 0.811352 | 7.307622e-51 | -8.615850e-47 |
Msa0079180 | Msa0909110 | 0.802631 | 5.120149e-49 | -8.615850e-47 |
Msa0079180 | Msa0927380 | 0.814761 | 1.306806e-51 | -8.615850e-47 |
Msa0079180 | Msa0931520 | 0.801149 | 1.031610e-48 | -8.615850e-47 |
Msa0079180 | Msa0938220 | 0.815712 | 8.033777e-52 | -8.615850e-47 |
Msa0079180 | Msa0945440 | 0.800366 | 1.490702e-48 | -8.615850e-47 |
Msa0079180 | Msa0947660 | 0.822388 | 2.433432e-53 | -8.615850e-47 |
Msa0079180 | Msa0960390 | 0.804972 | 1.671016e-49 | -8.615850e-47 |
Msa0079180 | Msa0964310 | 0.803461 | 3.448107e-49 | -8.615850e-47 |
Msa0079180 | Msa0969600 | 0.804182 | 2.442168e-49 | -8.615850e-47 |
Msa0079180 | Msa0969730 | 0.813313 | 2.726375e-51 | -8.615850e-47 |
Msa0079180 | Msa0974070 | 0.809480 | 1.853137e-50 | -8.615850e-47 |
Msa0079180 | Msa0976670 | 0.801041 | 1.085514e-48 | -8.615850e-47 |
Msa0079180 | Msa0987370 | 0.842734 | 2.157709e-58 | -8.615850e-47 |
Msa0079180 | Msa0993290 | 0.801859 | 7.381902e-49 | -8.615850e-47 |
Msa0079180 | Msa0993600 | 0.803194 | 3.916780e-49 | -8.615850e-47 |
Msa0079180 | Msa0997370 | 0.826854 | 2.159016e-54 | -8.615850e-47 |
Msa0079180 | Msa0997970 | 0.800071 | 1.711343e-48 | -8.615850e-47 |
Msa0079180 | Msa0999970 | 0.805609 | 1.229023e-49 | -8.615850e-47 |
Msa0079180 | Msa1002850 | 0.810694 | 1.014745e-50 | -8.615850e-47 |
Msa0079180 | Msa1003620 | 0.811896 | 5.566175e-51 | -8.615850e-47 |
Msa0079180 | Msa1012830 | 0.822411 | 2.402862e-53 | -8.615850e-47 |
Msa0079180 | Msa1014540 | 0.811500 | 6.788717e-51 | -8.615850e-47 |
Msa0079180 | Msa1023120 | 0.805786 | 1.128216e-49 | -8.615850e-47 |
Msa0079180 | Msa1029050 | 0.810764 | 9.800099e-51 | -8.615850e-47 |
Msa0079180 | Msa1035480 | 0.820816 | 5.616713e-53 | -8.615850e-47 |
Msa0079180 | Msa1036610 | 0.863299 | 2.749608e-64 | -8.615850e-47 |
Msa0079180 | Msa1039800 | 0.806600 | 7.603036e-50 | -8.615850e-47 |
Msa0079180 | Msa1046460 | 0.808750 | 2.656025e-50 | -8.615850e-47 |
Msa0079180 | Msa1051210 | 0.813506 | 2.473071e-51 | -8.615850e-47 |
Msa0079180 | Msa1063510 | 0.831893 | 1.289189e-55 | -8.615850e-47 |
Msa0079180 | Msa1064250 | 0.804729 | 1.878582e-49 | -8.615850e-47 |
Msa0079180 | Msa1075540 | 0.803415 | 3.523904e-49 | -8.615850e-47 |
Msa0079180 | Msa1075650 | 0.809950 | 1.468266e-50 | -8.615850e-47 |
Msa0079180 | Msa1081910 | 0.868081 | 8.508342e-66 | -8.615850e-47 |
Msa0079180 | Msa1081930 | 0.845316 | 4.381977e-59 | -8.615850e-47 |
Msa0079180 | Msa1082250 | 0.807622 | 4.620561e-50 | -8.615850e-47 |
Msa0079180 | Msa1082500 | 0.806921 | 6.504328e-50 | -8.615850e-47 |
Msa0079180 | Msa1091940 | 0.816579 | 5.141027e-52 | -8.615850e-47 |
Msa0079180 | Msa1100050 | 0.811355 | 7.298427e-51 | -8.615850e-47 |
Msa0079180 | Msa1107190 | 0.806290 | 8.837194e-50 | -8.615850e-47 |
Msa0079180 | Msa1109680 | 0.854830 | 9.479965e-62 | -8.615850e-47 |
Msa0079180 | Msa1111870 | 0.833134 | 6.347945e-56 | -8.615850e-47 |
Msa0079180 | Msa1117560 | 0.801090 | 1.061097e-48 | -8.615850e-47 |
Msa0079180 | Msa1119480 | 0.809515 | 1.821220e-50 | -8.615850e-47 |
Msa0079180 | Msa1121490 | 0.805448 | 1.328624e-49 | -8.615850e-47 |
Msa0079180 | Msa1124020 | 0.811435 | 7.012117e-51 | -8.615850e-47 |
Msa0079180 | Msa1133230 | 0.800925 | 1.146412e-48 | -8.615850e-47 |
Msa0079180 | Msa1137570 | 0.827576 | 1.449947e-54 | -8.615850e-47 |
Msa0079180 | Msa1144040 | 0.834837 | 2.378579e-56 | -8.615850e-47 |
Msa0079180 | Msa1148090 | 0.808002 | 3.835653e-50 | -8.615850e-47 |
Msa0079180 | Msa1154280 | 0.824627 | 7.284251e-54 | -8.615850e-47 |
Msa0079180 | Msa1160590 | 0.841179 | 5.560672e-58 | -8.615850e-47 |
Msa0079180 | Msa1162270 | 0.809496 | 1.838427e-50 | -8.615850e-47 |
Msa0079180 | Msa1162780 | 0.819457 | 1.149961e-52 | -8.615850e-47 |
Msa0079180 | Msa1163730 | 0.805970 | 1.032146e-49 | -8.615850e-47 |
Msa0079180 | Msa1167340 | 0.829919 | 3.931190e-55 | -8.615850e-47 |
Msa0079180 | Msa1168580 | 0.805366 | 1.381822e-49 | -8.615850e-47 |
Msa0079180 | Msa1172400 | 0.820102 | 8.191089e-53 | -8.615850e-47 |
Msa0079180 | Msa1174040 | 0.815580 | 8.594615e-52 | -8.615850e-47 |
Msa0079180 | Msa1176710 | 0.825123 | 5.566237e-54 | -8.615850e-47 |
Msa0079180 | Msa1176720 | 0.807841 | 4.151054e-50 | -8.615850e-47 |
Msa0079180 | Msa1180500 | 0.810948 | 8.941942e-51 | -8.615850e-47 |
Msa0079180 | Msa1181250 | 0.896091 | 5.141382e-76 | -8.615850e-47 |
Msa0079180 | Msa1181330 | 0.896142 | 4.898170e-76 | -8.615850e-47 |
Msa0079180 | Msa1181910 | 0.869203 | 3.692055e-66 | -8.615850e-47 |
Msa0079180 | Msa1193290 | 0.805415 | 1.349949e-49 | -8.615850e-47 |
Msa0079180 | Msa1206850 | 0.805876 | 1.080120e-49 | -8.615850e-47 |
Msa0079180 | Msa1208880 | 0.822804 | 1.947245e-53 | -8.615850e-47 |
Msa0079180 | Msa1210020 | 0.811097 | 8.301293e-51 | -8.615850e-47 |
Msa0079180 | Msa1221050 | 0.812940 | 3.292194e-51 | -8.615850e-47 |
Msa0079180 | Msa1224810 | 0.808090 | 3.673434e-50 | -8.615850e-47 |
Msa0079180 | Msa1228590 | 0.820633 | 6.186089e-53 | -8.615850e-47 |
Msa0079180 | Msa1231840 | 0.837640 | 4.614559e-57 | -8.615850e-47 |
Msa0079180 | Msa1232740 | 0.808695 | 2.728968e-50 | -8.615850e-47 |
Msa0079180 | Msa1245930 | 0.832592 | 8.658791e-56 | -8.615850e-47 |
Msa0079180 | Msa1246360 | 0.815342 | 9.709418e-52 | -8.615850e-47 |
Msa0079180 | Msa1246510 | 0.826759 | 2.274563e-54 | -8.615850e-47 |
Msa0079180 | Msa1253020 | 0.803719 | 3.048194e-49 | -8.615850e-47 |
Msa0079180 | Msa1254730 | 0.841288 | 5.204238e-58 | -8.615850e-47 |
Msa0079180 | Msa1255080 | 0.809231 | 2.096139e-50 | -8.615850e-47 |
Msa0079180 | Msa1257130 | 0.810729 | 9.973742e-51 | -8.615850e-47 |
Msa0079180 | Msa1259060 | 0.828366 | 9.355747e-55 | -8.615850e-47 |
Msa0079180 | Msa1263790 | 0.801308 | 9.572457e-49 | -8.615850e-47 |
Msa0079180 | Msa1270660 | 0.809549 | 1.791233e-50 | -8.615850e-47 |
Msa0079180 | Msa1270730 | 0.800542 | 1.372726e-48 | -8.615850e-47 |
Msa0079180 | Msa1272870 | 0.802871 | 4.566669e-49 | -8.615850e-47 |
Msa0079180 | Msa1276890 | 0.832044 | 1.183352e-55 | -8.615850e-47 |
Msa0079180 | Msa1277660 | 0.815793 | 7.706737e-52 | -8.615850e-47 |
Msa0079180 | Msa1280320 | 0.823435 | 1.387151e-53 | -8.615850e-47 |
Msa0079180 | Msa1284680 | 0.819786 | 9.671211e-53 | -8.615850e-47 |
Msa0079180 | Msa1286800 | 0.811540 | 6.651578e-51 | -8.615850e-47 |
Msa0079180 | Msa1287460 | 0.825734 | 3.989168e-54 | -8.615850e-47 |
Msa0079180 | Msa1294070 | 0.802136 | 6.474994e-49 | -8.615850e-47 |
Msa0079180 | Msa1294820 | 0.823537 | 1.313006e-53 | -8.615850e-47 |
Msa0079180 | Msa1298510 | 0.807804 | 4.226959e-50 | -8.615850e-47 |
Msa0079180 | Msa1302850 | 0.809580 | 1.764161e-50 | -8.615850e-47 |
Msa0079180 | Msa1306920 | 0.820109 | 8.161146e-53 | -8.615850e-47 |
Msa0079180 | Msa1312520 | 0.820496 | 6.652374e-53 | -8.615850e-47 |
Msa0079180 | Msa1313140 | 0.847366 | 1.210310e-59 | -8.615850e-47 |
Msa0079180 | Msa1313320 | 0.817692 | 2.890831e-52 | -8.615850e-47 |
Msa0079180 | Msa1332040 | -0.813390 | 2.622450e-51 | -8.615850e-47 |
Msa0079180 | Msa1345220 | 0.812618 | 3.873199e-51 | -8.615850e-47 |
Msa0079180 | Msa1348760 | 0.818681 | 1.726817e-52 | -8.615850e-47 |
Msa0079180 | Msa1353470 | 0.824544 | 7.620430e-54 | -8.615850e-47 |
Msa0079180 | Msa1353980 | 0.811720 | 6.079327e-51 | -8.615850e-47 |
Msa0079180 | Msa1355890 | 0.811574 | 6.541500e-51 | -8.615850e-47 |
Msa0079180 | Msa1357890 | 0.809613 | 1.735128e-50 | -8.615850e-47 |
Msa0079180 | Msa1358250 | 0.823360 | 1.444496e-53 | -8.615850e-47 |
Msa0079180 | Msa1370070 | -0.809099 | 2.236806e-50 | -8.615850e-47 |
Msa0079180 | Msa1373030 | 0.810603 | 1.061975e-50 | -8.615850e-47 |
Msa0079180 | Msa1377500 | 0.846770 | 1.763073e-59 | -8.615850e-47 |
Msa0079180 | Msa1392780 | 0.852273 | 5.144695e-61 | -8.615850e-47 |
Msa0079180 | Msa1393570 | 0.801751 | 7.765459e-49 | -8.615850e-47 |
Msa0079180 | Msa1397120 | 0.801723 | 7.871562e-49 | -8.615850e-47 |
Msa0079180 | Msa1398090 | 0.811369 | 7.245603e-51 | -8.615850e-47 |
Msa0079180 | Msa1400580 | 0.820861 | 5.485088e-53 | -8.615850e-47 |
Msa0079180 | Msa1403340 | 0.821111 | 4.804464e-53 | -8.615850e-47 |
Msa0079180 | Msa1411020 | 0.812104 | 5.014056e-51 | -8.615850e-47 |
Msa0079180 | Msa1412070 | 0.807424 | 5.088802e-50 | -8.615850e-47 |
Msa0079180 | Msa1412130 | 0.800169 | 1.634661e-48 | -8.615850e-47 |
Msa0079180 | Msa1419870 | 0.813919 | 2.006018e-51 | -8.615850e-47 |
Msa0079180 | Msa1419960 | 0.806184 | 9.302653e-50 | -8.615850e-47 |
Msa0079180 | Msa1423870 | 0.840027 | 1.113254e-57 | -8.615850e-47 |
Msa0079180 | Msa1424290 | 0.810275 | 1.249641e-50 | -8.615850e-47 |
Msa0079180 | Msa1425260 | 0.842553 | 2.410367e-58 | -8.615850e-47 |
Msa0079180 | Msa1427230 | 0.831807 | 1.354123e-55 | -8.615850e-47 |
Msa0079180 | Msa1432420 | 0.805172 | 1.517383e-49 | -8.615850e-47 |
Msa0079180 | Msa1434350 | 0.813158 | 2.948461e-51 | -8.615850e-47 |
Msa0079180 | Msa1439320 | 0.817308 | 3.527074e-52 | -8.615850e-47 |
Msa0079180 | Msa1449340 | -0.813361 | 2.661167e-51 | -8.615850e-47 |
Msa0079180 | Msa1454620 | 0.816273 | 6.020785e-52 | -8.615850e-47 |
Msa0079180 | Msa1457920 | 0.826377 | 2.805522e-54 | -8.615850e-47 |
Msa0079180 | Msa1460050 | 0.805667 | 1.195058e-49 | -8.615850e-47 |
Msa0079180 | Msa1460830 | 0.824522 | 7.710719e-54 | -8.615850e-47 |
Msa0079180 | Msa1463900 | 0.821957 | 3.062911e-53 | -8.615850e-47 |
Msa0079180 | Msa1466540 | 0.836446 | 9.312170e-57 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0079180 | MtrunA17_Chr1g0190101 | 99.595 | 247 | 1 | 0 | 1 | 247 | 1 | 247 | 0.0 | 508 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0079180 | AT4G12590.1 | 83.333 | 246 | 40 | 1 | 1 | 246 | 1 | 245 | 4.30e-154 | 428 |
Find 78 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAGCATGATGCTCGAAATT+TGG | 0.208439 | 1_2:-56982164 | None:intergenic |
TTCTCCAACCTTCTTTCTTA+TGG | 0.217168 | 1_2:-56982434 | None:intergenic |
TCTGTTGTTATGGTTCTTAT+TGG | 0.240582 | 1_2:+56978126 | Msa0079180:CDS |
TTTAGGTCCATGTTACAAAA+TGG | 0.280773 | 1_2:+56981216 | Msa0079180:CDS |
AATCCCTTTATCTGTTGTTA+TGG | 0.295399 | 1_2:+56978116 | Msa0079180:CDS |
CTCAATCTGTTTGGCTTAAG+AGG | 0.312313 | 1_2:+56981366 | Msa0079180:CDS |
TTCTTAAATAACATCAGTTC+TGG | 0.312638 | 1_2:-56982402 | None:intergenic |
TTCCATTGACTCAAAGGTTT+AGG | 0.321368 | 1_2:+56981199 | Msa0079180:CDS |
AGAACCATAACAACAGATAA+AGG | 0.348446 | 1_2:-56978120 | None:intergenic |
ACCTTCTTTCTTATGGCTAC+TGG | 0.354373 | 1_2:-56982427 | None:intergenic |
ATCGGAAGTTTAATTGCTTA+GGG | 0.367333 | 1_2:+56982231 | Msa0079180:three_prime_UTR |
GTGCTTGTGGATTCGTGGCT+TGG | 0.374021 | 1_2:-56978718 | None:intergenic |
ATTCATATTTGTACCTTTGA+AGG | 0.376759 | 1_2:-56981615 | None:intergenic |
TAGAATAATGGCGGAAGATC+TGG | 0.378579 | 1_2:+56978062 | Msa0079180:exon |
TGGATACTGCAATCAGAGAT+TGG | 0.384123 | 1_2:+56978088 | Msa0079180:CDS |
CGGGCACGAAAAGCCTTAGA+AGG | 0.386182 | 1_2:-56978369 | None:intergenic |
CATCGGAAGTTTAATTGCTT+AGG | 0.387632 | 1_2:+56982230 | Msa0079180:three_prime_UTR |
GGATTCGTGGCTTGGCCCTT+TGG | 0.388165 | 1_2:-56978710 | None:intergenic |
CTATCGAAAGACGAGGTTGC+CGG | 0.390954 | 1_2:+56977825 | Msa0079180:five_prime_UTR |
AATGGCGGAAGATCTGGTTT+TGG | 0.395876 | 1_2:+56978068 | Msa0079180:exon |
AGGATTGTTTAGTCTCATCT+TGG | 0.396848 | 1_2:+56981386 | Msa0079180:CDS |
AGGTACTTTCTCAATCTGTT+TGG | 0.404129 | 1_2:+56981357 | Msa0079180:intron |
GGATTGTTTAGTCTCATCTT+GGG | 0.407530 | 1_2:+56981387 | Msa0079180:CDS |
GGTTGGACCTTTGCCATCCT+TGG | 0.413923 | 1_2:+56982278 | Msa0079180:three_prime_UTR |
GACCTAAACCTTTGAGTCAA+TGG | 0.428275 | 1_2:-56981201 | None:intergenic |
TTGACATAACCCAACATGAC+TGG | 0.428580 | 1_2:+56982135 | Msa0079180:CDS |
ATGCAAATGGGTGGTGGATT+CGG | 0.429326 | 1_2:+56981585 | Msa0079180:CDS |
GGATACTGCAATCAGAGATT+GGG | 0.433624 | 1_2:+56978089 | Msa0079180:CDS |
AGTCAATGGAAAAGGTATCT+TGG | 0.442786 | 1_2:-56981187 | None:intergenic |
GAACCATAACAACAGATAAA+GGG | 0.446360 | 1_2:-56978119 | None:intergenic |
ATCATATCCATGGCCATGTT+CGG | 0.446386 | 1_2:-56978755 | None:intergenic |
TGGCAAGGCCCAGTCATGTT+GGG | 0.461277 | 1_2:-56982144 | None:intergenic |
ATTACAATAATAAAGCTTGC+GGG | 0.463442 | 1_2:-56978388 | None:intergenic |
TTAAACTTCCGATGTCATAT+AGG | 0.465874 | 1_2:-56982221 | None:intergenic |
TGGTCTGTTGTTCGTTCCAA+AGG | 0.466535 | 1_2:+56978694 | Msa0079180:CDS |
TTACATTCTATTGTTGCGGT+TGG | 0.473394 | 1_2:+56982261 | Msa0079180:three_prime_UTR |
AACCTTTGAGTCAATGGAAA+AGG | 0.476417 | 1_2:-56981195 | None:intergenic |
CATCTGTGCTTGTGGATTCG+TGG | 0.483223 | 1_2:-56978723 | None:intergenic |
GCTATGTCAGCAGTCGCTCC+TGG | 0.485535 | 1_2:+56981265 | Msa0079180:CDS |
TTGGGAAGAACGCAGAAGCT+TGG | 0.489162 | 1_2:-56978169 | None:intergenic |
CAAGCTTTATTATTGTAATG+AGG | 0.490585 | 1_2:+56978392 | Msa0079180:CDS |
TACACAGCTCAATATTTCAT+AGG | 0.493600 | 1_2:-56982461 | None:intergenic |
AGGAGGGAGATGTGCAGAGT+AGG | 0.495302 | 1_2:-56982546 | None:intergenic |
TACACAAAGAATGATGCAAA+TGG | 0.499016 | 1_2:+56981572 | Msa0079180:CDS |
AGAGGAACAAGATCGAGAAC+TGG | 0.508615 | 1_2:-56977868 | None:intergenic |
GGAGGGAGATGTGCAGAGTA+GGG | 0.521384 | 1_2:-56982545 | None:intergenic |
GCCAGTAGCCATAAGAAAGA+AGG | 0.529286 | 1_2:+56982426 | Msa0079180:three_prime_UTR |
ACACTTACATTCTATTGTTG+CGG | 0.533115 | 1_2:+56982257 | Msa0079180:three_prime_UTR |
TGACATAACCCAACATGACT+GGG | 0.533631 | 1_2:+56982136 | Msa0079180:CDS |
GGTCTGTTGTTCGTTCCAAA+GGG | 0.539924 | 1_2:+56978695 | Msa0079180:CDS |
ATGTGCAGAGTAGGGCTTCG+CGG | 0.546360 | 1_2:-56982537 | None:intergenic |
TCTTTCAATGATCATACCTC+AGG | 0.547565 | 1_2:+56978787 | Msa0079180:CDS |
CTCTGATCCGAACATGGCCA+TGG | 0.554603 | 1_2:+56978748 | Msa0079180:CDS |
TTGGCAAGGCCCAGTCATGT+TGG | 0.556486 | 1_2:-56982145 | None:intergenic |
ATTCGGATTTGATCCTTCAA+AGG | 0.558196 | 1_2:+56981602 | Msa0079180:CDS |
TCAGAGAACATCTGTGCTTG+TGG | 0.560054 | 1_2:-56978731 | None:intergenic |
GATATCAAAATTGTCAGAGA+AGG | 0.562692 | 1_2:+56978198 | Msa0079180:CDS |
GATTGTTTAGTCTCATCTTG+GGG | 0.571481 | 1_2:+56981388 | Msa0079180:CDS |
AGCTCGGAATTTACGTGCTG+CGG | 0.574470 | 1_2:+56978335 | Msa0079180:CDS |
ACACAAAGAATGATGCAAAT+GGG | 0.575278 | 1_2:+56981573 | Msa0079180:CDS |
CATTACAATAATAAAGCTTG+CGG | 0.576893 | 1_2:-56978389 | None:intergenic |
AGAATGATGCAAATGGGTGG+TGG | 0.577037 | 1_2:+56981579 | Msa0079180:CDS |
GGCAAGTTATGCTTAGAGCT+CGG | 0.581999 | 1_2:+56978319 | Msa0079180:intron |
ATATCAAAATTGTCAGAGAA+GGG | 0.586701 | 1_2:+56978199 | Msa0079180:CDS |
GTAGCCATAAGAAAGAAGGT+TGG | 0.598364 | 1_2:+56982430 | Msa0079180:three_prime_UTR |
GCGCGATGCGTCACAAACAG+AGG | 0.610687 | 1_2:-56977886 | None:intergenic |
GATGTTCTCTGATCCGAACA+TGG | 0.617346 | 1_2:+56978742 | Msa0079180:CDS |
GATCGATTGTGTGACACAGC+CGG | 0.617555 | 1_2:-56977844 | None:intergenic |
TCGGAAGTTTAATTGCTTAG+GGG | 0.624960 | 1_2:+56982232 | Msa0079180:three_prime_UTR |
ATGATGCTCGAAATTTGGCA+AGG | 0.632426 | 1_2:-56982159 | None:intergenic |
CCACGATGTAGTAACTGATG+AGG | 0.636910 | 1_2:-56977913 | None:intergenic |
ATTGTTTAGTCTCATCTTGG+GGG | 0.651233 | 1_2:+56981389 | Msa0079180:CDS |
GAACAATACCTATATGACAT+CGG | 0.653084 | 1_2:+56982213 | Msa0079180:exon |
AGCTAACATCAACTGTGCTG+AGG | 0.659434 | 1_2:-56981245 | None:intergenic |
GGGCACGAAAAGCCTTAGAA+GGG | 0.660230 | 1_2:-56978368 | None:intergenic |
TGTTAAACTATCGAAAGACG+AGG | 0.674238 | 1_2:+56977818 | Msa0079180:five_prime_UTR |
CCTCATCAGTTACTACATCG+TGG | 0.720363 | 1_2:+56977913 | Msa0079180:five_prime_UTR |
CAAAGAATGATGCAAATGGG+TGG | 0.748607 | 1_2:+56981576 | Msa0079180:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTAATTTGATGTTATA+TGG | + | chr1_2:56978274-56978293 | Msa0079180:intron | 10.0% |
!! | TTAAATTTATGTTTCTTATT+TGG | + | chr1_2:56978453-56978472 | Msa0079180:intron | 10.0% |
!!! | TAAATTTATGTTTCTTATTT+GGG | + | chr1_2:56978454-56978473 | Msa0079180:intron | 10.0% |
!! | TATATACAAAAAATTAAAAC+TGG | - | chr1_2:56979115-56979134 | None:intergenic | 10.0% |
!!! | TTATGTATGATTTTAGATTT+GGG | - | chr1_2:56977979-56977998 | None:intergenic | 15.0% |
!!! | ATTATGTATGATTTTAGATT+TGG | - | chr1_2:56977980-56977999 | None:intergenic | 15.0% |
!!! | ATTTTTATTATGATTTCTTC+TGG | - | chr1_2:56979806-56979825 | None:intergenic | 15.0% |
!! | GAAGAAATCATAATAAAAAT+AGG | + | chr1_2:56979806-56979825 | Msa0079180:intron | 15.0% |
!! | TAAGATTATAAACAAATTCT+AGG | + | chr1_2:56979859-56979878 | Msa0079180:intron | 15.0% |
!!! | TTTTTAACCTTTTCTTATAA+AGG | - | chr1_2:56981883-56981902 | None:intergenic | 15.0% |
!!! | AAGTTTTTCAGTAAAACAAA+AGG | + | chr1_2:56977751-56977770 | Msa0079180:five_prime_UTR | 20.0% |
!! | TGAAATTGAAATTAGAAACA+AGG | - | chr1_2:56977953-56977972 | None:intergenic | 20.0% |
!!! | TTTGTTAGGTTTTAGAATAA+TGG | + | chr1_2:56978050-56978069 | Msa0079180:exon | 20.0% |
!! | AATTAACAACTTATTGTTTG+AGG | + | chr1_2:56978508-56978527 | Msa0079180:intron | 20.0% |
!!! | TGTTTGTCAATTTTTGTTAA+AGG | + | chr1_2:56978667-56978686 | Msa0079180:intron | 20.0% |
!!! | CAATTTTTGTTAAAGGAAAA+TGG | + | chr1_2:56978674-56978693 | Msa0079180:intron | 20.0% |
!!! | ATTTTTTGTATATATACGGT+TGG | + | chr1_2:56979121-56979140 | Msa0079180:intron | 20.0% |
!!! | ATTCTTGGTTTTTTTTCTTT+TGG | + | chr1_2:56979406-56979425 | Msa0079180:intron | 20.0% |
!!! | ATTTTGTAGTTCTATATAGT+TGG | - | chr1_2:56979575-56979594 | None:intergenic | 20.0% |
!!! | ATAATCTTAAAGTATCTCTT+AGG | - | chr1_2:56979848-56979867 | None:intergenic | 20.0% |
!!! | AGATACTCTTTTCTTTTTTA+TGG | + | chr1_2:56979892-56979911 | Msa0079180:intron | 20.0% |
!! | TAAAACTATAATTTCCAAGT+TGG | - | chr1_2:56981674-56981693 | None:intergenic | 20.0% |
!!! | TCAAGTTTTTTTTTTAGCAA+AGG | + | chr1_2:56981789-56981808 | Msa0079180:intron | 20.0% |
!!! | ATATTTTTCCGTAGTTTGTT+AGG | + | chr1_2:56978036-56978055 | Msa0079180:intron | 25.0% |
!!! | TTCTAAAACCTAACAAACTA+CGG | - | chr1_2:56978047-56978066 | None:intergenic | 25.0% |
! | ATATCAAAATTGTCAGAGAA+GGG | + | chr1_2:56978199-56978218 | Msa0079180:CDS | 25.0% |
! | TTGATGTTATATGGATGATT+TGG | + | chr1_2:56978283-56978302 | Msa0079180:intron | 25.0% |
! | ATTACAATAATAAAGCTTGC+GGG | - | chr1_2:56978391-56978410 | None:intergenic | 25.0% |
! | CATTACAATAATAAAGCTTG+CGG | - | chr1_2:56978392-56978411 | None:intergenic | 25.0% |
!!! | CAAGCTTTATTATTGTAATG+AGG | + | chr1_2:56978392-56978411 | Msa0079180:CDS | 25.0% |
!!! | AGAAAACCTTTAAAACTCAT+CGG | + | chr1_2:56978559-56978578 | Msa0079180:intron | 25.0% |
!! | ATTTTTCTTCATCATATCCA+TGG | - | chr1_2:56978768-56978787 | None:intergenic | 25.0% |
!! | AAAAAGTATAATAACAGGCA+AGG | - | chr1_2:56978869-56978888 | None:intergenic | 25.0% |
!! | TTGGCAAAAAGTATAATAAC+AGG | - | chr1_2:56978874-56978893 | None:intergenic | 25.0% |
! | TTAGTATGGCAATTCATAAT+TGG | - | chr1_2:56978893-56978912 | None:intergenic | 25.0% |
! | GTAAACAATACAAGTTAGTA+TGG | - | chr1_2:56978907-56978926 | None:intergenic | 25.0% |
! | TTGTATTGTTTACTCTTGTT+GGG | + | chr1_2:56978914-56978933 | Msa0079180:intron | 25.0% |
! | GTAGTGTCATAATATTAGAT+TGG | + | chr1_2:56979017-56979036 | Msa0079180:intron | 25.0% |
! | ATATCTTGACTTATTGTCTA+TGG | + | chr1_2:56979164-56979183 | Msa0079180:intron | 25.0% |
! | ATATCAACTAATCAAACAGA+CGG | + | chr1_2:56979220-56979239 | Msa0079180:intron | 25.0% |
!!! | GTTTTTTTTCTTTTGGTTCA+AGG | + | chr1_2:56979413-56979432 | Msa0079180:intron | 25.0% |
! | AGAATGGGAGATAAAATAAA+AGG | + | chr1_2:56979507-56979526 | Msa0079180:intron | 25.0% |
! | GAATGGGAGATAAAATAAAA+GGG | + | chr1_2:56979508-56979527 | Msa0079180:intron | 25.0% |
! | AATGGGAGATAAAATAAAAG+GGG | + | chr1_2:56979509-56979528 | Msa0079180:intron | 25.0% |
!! | TCTGATTTTTCCTATGAATT+GGG | - | chr1_2:56979623-56979642 | None:intergenic | 25.0% |
! | GAAAAATCAGAGAATACATT+AGG | + | chr1_2:56979632-56979651 | Msa0079180:intron | 25.0% |
!! | TTGTGGGATTTTAGATAAAA+GGG | + | chr1_2:56979661-56979680 | Msa0079180:intron | 25.0% |
! | AATTGAGACTTATAGTACTT+AGG | - | chr1_2:56979986-56980005 | None:intergenic | 25.0% |
!!! | ATAAGTCTCAATTTTTCAGA+TGG | + | chr1_2:56979993-56980012 | Msa0079180:intron | 25.0% |
! | AAAGAGGAAAAATCTACTAT+GGG | - | chr1_2:56980074-56980093 | None:intergenic | 25.0% |
! | ATGTATAACTTTACCAAACT+TGG | + | chr1_2:56980550-56980569 | Msa0079180:intron | 25.0% |
! | AAATTCTATTACTGAGTAAC+AGG | + | chr1_2:56980921-56980940 | Msa0079180:intron | 25.0% |
!!! | AAGTTTTAGTTCAATAACTG+CGG | - | chr1_2:56980949-56980968 | None:intergenic | 25.0% |
!!! | GTTGATTTTTCCATTATAAC+TGG | + | chr1_2:56981487-56981506 | Msa0079180:intron | 25.0% |
! | TTTCCATTATAACTGGAATT+TGG | + | chr1_2:56981494-56981513 | Msa0079180:intron | 25.0% |
! | TATCCAAATTCCAGTTATAA+TGG | - | chr1_2:56981500-56981519 | None:intergenic | 25.0% |
! | ATTCATATTTGTACCTTTGA+AGG | - | chr1_2:56981618-56981637 | None:intergenic | 25.0% |
!! | TTCAAAGGTACAAATATGAA+TGG | + | chr1_2:56981617-56981636 | Msa0079180:intron | 25.0% |
!!! | ATAATTTTGAAGATCCAACT+TGG | + | chr1_2:56981657-56981676 | Msa0079180:intron | 25.0% |
!! | TTAACCTTTTCTTATAAAGG+TGG | - | chr1_2:56981880-56981899 | None:intergenic | 25.0% |
! | GGTTAAAAAAGAATAGTTCT+TGG | + | chr1_2:56981894-56981913 | Msa0079180:intron | 25.0% |
!!! | ACCTTTTTAATCTTGTTTTC+AGG | + | chr1_2:56982088-56982107 | Msa0079180:intron | 25.0% |
!!! | CCTTTTTAATCTTGTTTTCA+GGG | + | chr1_2:56982089-56982108 | Msa0079180:intron | 25.0% |
! | TTCTTAAATAACATCAGTTC+TGG | - | chr1_2:56982405-56982424 | None:intergenic | 25.0% |
!!! | GTTAGGTTTTAGAATAATGG+CGG | + | chr1_2:56978053-56978072 | Msa0079180:exon | 30.0% |
AATCCCTTTATCTGTTGTTA+TGG | + | chr1_2:56978116-56978135 | Msa0079180:CDS | 30.0% | |
GAACCATAACAACAGATAAA+GGG | - | chr1_2:56978122-56978141 | None:intergenic | 30.0% | |
AGAACCATAACAACAGATAA+AGG | - | chr1_2:56978123-56978142 | None:intergenic | 30.0% | |
TCTGTTGTTATGGTTCTTAT+TGG | + | chr1_2:56978126-56978145 | Msa0079180:CDS | 30.0% | |
!! | AATTTTGATATCAGGGGTTT+GGG | - | chr1_2:56978190-56978209 | None:intergenic | 30.0% |
!! | TCTGACAATTTTGATATCAG+GGG | - | chr1_2:56978196-56978215 | None:intergenic | 30.0% |
!! | CTCTGACAATTTTGATATCA+GGG | - | chr1_2:56978197-56978216 | None:intergenic | 30.0% |
!! | TCTCTGACAATTTTGATATC+AGG | - | chr1_2:56978198-56978217 | None:intergenic | 30.0% |
GATATCAAAATTGTCAGAGA+AGG | + | chr1_2:56978198-56978217 | Msa0079180:CDS | 30.0% | |
!! | TGATTTGGTGATCTTAATAC+AGG | + | chr1_2:56978298-56978317 | Msa0079180:intron | 30.0% |
!! | GTGTATTCTAGTTTGATAGA+AGG | + | chr1_2:56978429-56978448 | Msa0079180:intron | 30.0% |
TATTTGGGAGAACAATGTAA+TGG | + | chr1_2:56978469-56978488 | Msa0079180:intron | 30.0% | |
!! | AATGTAATGGCTTTTGTTGT+GGG | + | chr1_2:56978482-56978501 | Msa0079180:intron | 30.0% |
!! | TAACTTCCGATGAGTTTTAA+AGG | - | chr1_2:56978568-56978587 | None:intergenic | 30.0% |
CATTTGTCTAACCAATTCAA+CGG | + | chr1_2:56978635-56978654 | Msa0079180:intron | 30.0% | |
!! | GTTACTGTGTCATTAGATTT+TGG | + | chr1_2:56978835-56978854 | Msa0079180:intron | 30.0% |
CTTGTATTGTTTACTCTTGT+TGG | + | chr1_2:56978913-56978932 | Msa0079180:intron | 30.0% | |
CTAATATTATGACACTACGA+GGG | - | chr1_2:56979015-56979034 | None:intergenic | 30.0% | |
TCTAATATTATGACACTACG+AGG | - | chr1_2:56979016-56979035 | None:intergenic | 30.0% | |
AGATATATACGTGCTTATTC+AGG | - | chr1_2:56979150-56979169 | None:intergenic | 30.0% | |
! | ATCAAACAGACGGTTTTTAT+TGG | + | chr1_2:56979230-56979249 | Msa0079180:intron | 30.0% |
ACATATGATAGATTACCTAG+TGG | + | chr1_2:56979263-56979282 | Msa0079180:intron | 30.0% | |
CATATGATAGATTACCTAGT+GGG | + | chr1_2:56979264-56979283 | Msa0079180:intron | 30.0% | |
CTATCAAAGAAATGTACCAA+GGG | + | chr1_2:56979301-56979320 | Msa0079180:intron | 30.0% | |
TATCAAAGAAATGTACCAAG+GGG | + | chr1_2:56979302-56979321 | Msa0079180:intron | 30.0% | |
! | TGTGTCAAGATAACATCTTT+TGG | - | chr1_2:56979453-56979472 | None:intergenic | 30.0% |
AGATGATAGACAGTCATAAA+TGG | + | chr1_2:56979483-56979502 | Msa0079180:intron | 30.0% | |
GATGATAGACAGTCATAAAT+GGG | + | chr1_2:56979484-56979503 | Msa0079180:intron | 30.0% | |
! | CTCTGATTTTTCCTATGAAT+TGG | - | chr1_2:56979624-56979643 | None:intergenic | 30.0% |
!! | AATACATTAGGTTGAAGTTG+TGG | + | chr1_2:56979644-56979663 | Msa0079180:intron | 30.0% |
!! | ATACATTAGGTTGAAGTTGT+GGG | + | chr1_2:56979645-56979664 | Msa0079180:intron | 30.0% |
! | GTTGTGGGATTTTAGATAAA+AGG | + | chr1_2:56979660-56979679 | Msa0079180:intron | 30.0% |
! | TGTGGGATTTTAGATAAAAG+GGG | + | chr1_2:56979662-56979681 | Msa0079180:intron | 30.0% |
AAACACTAATCCCTGTTTAT+AGG | + | chr1_2:56979757-56979776 | Msa0079180:intron | 30.0% | |
AACACTAATCCCTGTTTATA+GGG | + | chr1_2:56979758-56979777 | Msa0079180:intron | 30.0% | |
! | GACTTATAGTACTTAGGTTT+TGG | - | chr1_2:56979980-56979999 | None:intergenic | 30.0% |
!! | TTTTTCAGATGGATCATGTT+TGG | + | chr1_2:56980004-56980023 | Msa0079180:intron | 30.0% |
AGTGAAACTTCAAAATCCAA+CGG | - | chr1_2:56980033-56980052 | None:intergenic | 30.0% | |
GAAAGAGGAAAAATCTACTA+TGG | - | chr1_2:56980075-56980094 | None:intergenic | 30.0% | |
ATTTCATGGTCGTAAAAATG+GGG | - | chr1_2:56980516-56980535 | None:intergenic | 30.0% | |
CATTTCATGGTCGTAAAAAT+GGG | - | chr1_2:56980517-56980536 | None:intergenic | 30.0% | |
AGTTATACATATGTATGCTC+TGG | - | chr1_2:56980540-56980559 | None:intergenic | 30.0% | |
! | TGTTAAGTTTGTTCCAAGTT+TGG | - | chr1_2:56980566-56980585 | None:intergenic | 30.0% |
ACAAACTTAACACTTTGTTG+TGG | + | chr1_2:56980574-56980593 | Msa0079180:intron | 30.0% | |
GATTGAATAGGATTCAATCA+TGG | - | chr1_2:56980743-56980762 | None:intergenic | 30.0% | |
TTTAGGTCCATGTTACAAAA+TGG | + | chr1_2:56981216-56981235 | Msa0079180:CDS | 30.0% | |
! | GTCTATTCCATTTTGTAACA+TGG | - | chr1_2:56981226-56981245 | None:intergenic | 30.0% |
CTATGAAAAAGAAGATTACC+AGG | - | chr1_2:56981286-56981305 | None:intergenic | 30.0% | |
AATTGTCATGATTGCATTTC+AGG | + | chr1_2:56981337-56981356 | Msa0079180:intron | 30.0% | |
! | CACTTGTTACAAATTACGAT+TGG | + | chr1_2:56981522-56981541 | Msa0079180:intron | 30.0% |
TACACAAAGAATGATGCAAA+TGG | + | chr1_2:56981572-56981591 | Msa0079180:CDS | 30.0% | |
ACACAAAGAATGATGCAAAT+GGG | + | chr1_2:56981573-56981592 | Msa0079180:CDS | 30.0% | |
TACAAAGAGAAGCAAAATGT+AGG | + | chr1_2:56981845-56981864 | Msa0079180:intron | 30.0% | |
! | TATTTGAAACTGCAAAGCTA+AGG | - | chr1_2:56981998-56982017 | None:intergenic | 30.0% |
CCCTGAAAACAAGATTAAAA+AGG | - | chr1_2:56982092-56982111 | None:intergenic | 30.0% | |
GAACAATACCTATATGACAT+CGG | + | chr1_2:56982213-56982232 | Msa0079180:exon | 30.0% | |
TTAAACTTCCGATGTCATAT+AGG | - | chr1_2:56982224-56982243 | None:intergenic | 30.0% | |
ATCGGAAGTTTAATTGCTTA+GGG | + | chr1_2:56982231-56982250 | Msa0079180:three_prime_UTR | 30.0% | |
ACACTTACATTCTATTGTTG+CGG | + | chr1_2:56982257-56982276 | Msa0079180:three_prime_UTR | 30.0% | |
! | ATCTTCAATATCTTTTGCCA+AGG | - | chr1_2:56982298-56982317 | None:intergenic | 30.0% |
TACACAGCTCAATATTTCAT+AGG | - | chr1_2:56982464-56982483 | None:intergenic | 30.0% | |
TGTTAAACTATCGAAAGACG+AGG | + | chr1_2:56977818-56977837 | Msa0079180:five_prime_UTR | 35.0% | |
!! | CAATTTTGATATCAGGGGTT+TGG | - | chr1_2:56978191-56978210 | None:intergenic | 35.0% |
! | GGCTAATTTTATCCCTTCTA+AGG | + | chr1_2:56978356-56978375 | Msa0079180:CDS | 35.0% |
! | CAATGTAATGGCTTTTGTTG+TGG | + | chr1_2:56978481-56978500 | Msa0079180:intron | 35.0% |
CAATTAGTTCACCGTTGAAT+TGG | - | chr1_2:56978649-56978668 | None:intergenic | 35.0% | |
TCTTTCAATGATCATACCTC+AGG | + | chr1_2:56978787-56978806 | Msa0079180:CDS | 35.0% | |
TAATCTATTCTCAACACCTG+AGG | - | chr1_2:56978806-56978825 | None:intergenic | 35.0% | |
!! | TGGGTGAACTTTTTCTTTTC+TGG | + | chr1_2:56978955-56978974 | Msa0079180:CDS | 35.0% |
! | TTCTTTTCTGGATTTGTAGC+AGG | + | chr1_2:56978967-56978986 | Msa0079180:CDS | 35.0% |
TGTTTATGCCTGTCATGTTA+CGG | + | chr1_2:56979079-56979098 | Msa0079180:intron | 35.0% | |
GCTATCAAAGAAATGTACCA+AGG | + | chr1_2:56979300-56979319 | Msa0079180:intron | 35.0% | |
! | ACAACTAGTTTGAGCATACA+AGG | + | chr1_2:56979327-56979346 | Msa0079180:intron | 35.0% |
ACAGTCATAAATGGGAGAAT+GGG | + | chr1_2:56979492-56979511 | Msa0079180:intron | 35.0% | |
CATTCACAATCCCAATTCAT+AGG | + | chr1_2:56979610-56979629 | Msa0079180:intron | 35.0% | |
! | GTGGGATTTTAGATAAAAGG+GGG | + | chr1_2:56979663-56979682 | Msa0079180:intron | 35.0% |
! | AGGGATTAGTGTTTAGTCTT+CGG | - | chr1_2:56979751-56979770 | None:intergenic | 35.0% |
TCTGTGTATCCCTATAAACA+GGG | - | chr1_2:56979770-56979789 | None:intergenic | 35.0% | |
AACCTCTGTTTGACAACATT+GGG | - | chr1_2:56980099-56980118 | None:intergenic | 35.0% | |
TAACCTCTGTTTGACAACAT+TGG | - | chr1_2:56980100-56980119 | None:intergenic | 35.0% | |
! | TACGAAGTTTTGCCAAATAG+AGG | + | chr1_2:56980189-56980208 | Msa0079180:intron | 35.0% |
TGAATTTCGCTATGCTATAG+AGG | - | chr1_2:56980232-56980251 | None:intergenic | 35.0% | |
! | TTGTGGATTGCAGAAAATAG+CGG | - | chr1_2:56980261-56980280 | None:intergenic | 35.0% |
GAAAGCAATGTTGTCAATTG+TGG | - | chr1_2:56980278-56980297 | None:intergenic | 35.0% | |
GTATACATCATCTTCAACGA+AGG | - | chr1_2:56980452-56980471 | None:intergenic | 35.0% | |
TTTCATGGTCGTAAAAATGG+GGG | - | chr1_2:56980515-56980534 | None:intergenic | 35.0% | |
GCATTTCATGGTCGTAAAAA+TGG | - | chr1_2:56980518-56980537 | None:intergenic | 35.0% | |
CAAATCTCTTCATCGTATCA+GGG | - | chr1_2:56980765-56980784 | None:intergenic | 35.0% | |
TCAAATCTCTTCATCGTATC+AGG | - | chr1_2:56980766-56980785 | None:intergenic | 35.0% | |
TTTACATCAGTCTTCTCTAC+TGG | + | chr1_2:56980863-56980882 | Msa0079180:intron | 35.0% | |
ATTTGAGAAGCAGATAACAG+AGG | - | chr1_2:56981147-56981166 | None:intergenic | 35.0% | |
!! | AGTCAATGGAAAAGGTATCT+TGG | - | chr1_2:56981190-56981209 | None:intergenic | 35.0% |
!!! | TACCTTTTCCATTGACTCAA+AGG | + | chr1_2:56981193-56981212 | Msa0079180:CDS | 35.0% |
AACCTTTGAGTCAATGGAAA+AGG | - | chr1_2:56981198-56981217 | None:intergenic | 35.0% | |
!! | TTCCATTGACTCAAAGGTTT+AGG | + | chr1_2:56981199-56981218 | Msa0079180:CDS | 35.0% |
AACACAAGTAAGAGTGAAAC+AGG | - | chr1_2:56981316-56981335 | None:intergenic | 35.0% | |
AGGTACTTTCTCAATCTGTT+TGG | + | chr1_2:56981357-56981376 | Msa0079180:intron | 35.0% | |
AGGATTGTTTAGTCTCATCT+TGG | + | chr1_2:56981386-56981405 | Msa0079180:CDS | 35.0% | |
GGATTGTTTAGTCTCATCTT+GGG | + | chr1_2:56981387-56981406 | Msa0079180:CDS | 35.0% | |
GATTGTTTAGTCTCATCTTG+GGG | + | chr1_2:56981388-56981407 | Msa0079180:CDS | 35.0% | |
ATTGTTTAGTCTCATCTTGG+GGG | + | chr1_2:56981389-56981408 | Msa0079180:CDS | 35.0% | |
ATTCGGATTTGATCCTTCAA+AGG | + | chr1_2:56981602-56981621 | Msa0079180:CDS | 35.0% | |
TCTGCCACCTTTATAAGAAA+AGG | + | chr1_2:56981873-56981892 | Msa0079180:intron | 35.0% | |
AATTAGCCAATTTCTCAGCA+AGG | - | chr1_2:56981922-56981941 | None:intergenic | 35.0% | |
AGAAATTGGCTAATTGCCTT+GGG | + | chr1_2:56981927-56981946 | Msa0079180:intron | 35.0% | |
TGTTAGAAACTACAGTAGGT+AGG | - | chr1_2:56982050-56982069 | None:intergenic | 35.0% | |
! | GCTTTGTTAGAAACTACAGT+AGG | - | chr1_2:56982054-56982073 | None:intergenic | 35.0% |
CATCGGAAGTTTAATTGCTT+AGG | + | chr1_2:56982230-56982249 | Msa0079180:three_prime_UTR | 35.0% | |
TCGGAAGTTTAATTGCTTAG+GGG | + | chr1_2:56982232-56982251 | Msa0079180:three_prime_UTR | 35.0% | |
TTACATTCTATTGTTGCGGT+TGG | + | chr1_2:56982261-56982280 | Msa0079180:three_prime_UTR | 35.0% | |
! | TCAATATCTTTTGCCAAGGA+TGG | - | chr1_2:56982294-56982313 | None:intergenic | 35.0% |
TTCTCCAACCTTCTTTCTTA+TGG | - | chr1_2:56982437-56982456 | None:intergenic | 35.0% | |
! | TAGAATAATGGCGGAAGATC+TGG | + | chr1_2:56978062-56978081 | Msa0079180:exon | 40.0% |
TGGATACTGCAATCAGAGAT+TGG | + | chr1_2:56978088-56978107 | Msa0079180:CDS | 40.0% | |
GGATACTGCAATCAGAGATT+GGG | + | chr1_2:56978089-56978108 | Msa0079180:CDS | 40.0% | |
TAACTCTCTGACTCTATCAC+AGG | + | chr1_2:56978589-56978608 | Msa0079180:intron | 40.0% | |
ATCATATCCATGGCCATGTT+CGG | - | chr1_2:56978758-56978777 | None:intergenic | 40.0% | |
!! | GCAGACTCTTACTTTTGCTT+GGG | + | chr1_2:56978936-56978955 | Msa0079180:intron | 40.0% |
! | TCTGCTTGCTACAAAGATTG+AGG | + | chr1_2:56979193-56979212 | Msa0079180:intron | 40.0% |
! | CTGCTTGCTACAAAGATTGA+GGG | + | chr1_2:56979194-56979213 | Msa0079180:intron | 40.0% |
CTAAATGTGAGTAACCCACT+AGG | - | chr1_2:56979281-56979300 | None:intergenic | 40.0% | |
GGTACACACTTATAGCTGTT+GGG | - | chr1_2:56979372-56979391 | None:intergenic | 40.0% | |
TGGTACACACTTATAGCTGT+TGG | - | chr1_2:56979373-56979392 | None:intergenic | 40.0% | |
ACAGCTATAAGTGTGTACCA+AGG | + | chr1_2:56979373-56979392 | Msa0079180:intron | 40.0% | |
CAGCTATAAGTGTGTACCAA+GGG | + | chr1_2:56979374-56979393 | Msa0079180:intron | 40.0% | |
CAAGAATCAAAGTTGACCCT+TGG | - | chr1_2:56979393-56979412 | None:intergenic | 40.0% | |
CAAGGGTCAACTTTGATTCT+TGG | + | chr1_2:56979391-56979410 | Msa0079180:intron | 40.0% | |
GACTGTCTATCATCTGCAAA+AGG | - | chr1_2:56979478-56979497 | None:intergenic | 40.0% | |
GACAGTCATAAATGGGAGAA+TGG | + | chr1_2:56979491-56979510 | Msa0079180:intron | 40.0% | |
GTCTGTGTATCCCTATAAAC+AGG | - | chr1_2:56979771-56979790 | None:intergenic | 40.0% | |
GAGGAAAAATCTACTATGGG+AGG | - | chr1_2:56980071-56980090 | None:intergenic | 40.0% | |
TTGACAACATTGGGAGAAAG+AGG | - | chr1_2:56980090-56980109 | None:intergenic | 40.0% | |
TGAAGATGATGTATACCCCA+AGG | + | chr1_2:56980456-56980475 | Msa0079180:intron | 40.0% | |
TTCATGGTCGTAAAAATGGG+GGG | - | chr1_2:56980514-56980533 | None:intergenic | 40.0% | |
ATGTATGCTCTGGCATTTCA+TGG | - | chr1_2:56980530-56980549 | None:intergenic | 40.0% | |
! | TTGTTGTTGGCTATTGCTGA+AGG | + | chr1_2:56980672-56980691 | Msa0079180:intron | 40.0% |
TGAGATGAAGTAGCAGATTG+AGG | + | chr1_2:56980709-56980728 | Msa0079180:intron | 40.0% | |
CATCGTATCAGGGATTGAAT+AGG | - | chr1_2:56980755-56980774 | None:intergenic | 40.0% | |
TTTGCGAGAGAATGAGATCA+AGG | + | chr1_2:56980798-56980817 | Msa0079180:intron | 40.0% | |
TTGCGAGAGAATGAGATCAA+GGG | + | chr1_2:56980799-56980818 | Msa0079180:intron | 40.0% | |
TATAGTTGCCTTGCACGAAA+AGG | + | chr1_2:56981065-56981084 | Msa0079180:intron | 40.0% | |
! | AACTAAAGCCTTTTCGTGCA+AGG | - | chr1_2:56981076-56981095 | None:intergenic | 40.0% |
AACAGAGGCAAGGAATACAA+GGG | - | chr1_2:56981132-56981151 | None:intergenic | 40.0% | |
TAACAGAGGCAAGGAATACA+AGG | - | chr1_2:56981133-56981152 | None:intergenic | 40.0% | |
GACCTAAACCTTTGAGTCAA+TGG | - | chr1_2:56981204-56981223 | None:intergenic | 40.0% | |
! | CTCAATCTGTTTGGCTTAAG+AGG | + | chr1_2:56981366-56981385 | Msa0079180:CDS | 40.0% |
CAAAGAATGATGCAAATGGG+TGG | + | chr1_2:56981576-56981595 | Msa0079180:CDS | 40.0% | |
GGATATTTCCTCGTGAGATA+TGG | - | chr1_2:56981726-56981745 | None:intergenic | 40.0% | |
CTCACGAGGAAATATCCATA+TGG | + | chr1_2:56981729-56981748 | Msa0079180:intron | 40.0% | |
ACGAGGAAATATCCATATGG+AGG | + | chr1_2:56981732-56981751 | Msa0079180:intron | 40.0% | |
TAAGCTACAGAACCTCCATA+TGG | - | chr1_2:56981747-56981766 | None:intergenic | 40.0% | |
GTAGCTTAACTACTTCACTG+AGG | + | chr1_2:56981759-56981778 | Msa0079180:intron | 40.0% | |
GAGAAATTGGCTAATTGCCT+TGG | + | chr1_2:56981926-56981945 | Msa0079180:intron | 40.0% | |
TTGGGATGCTATACAAGCAA+GGG | + | chr1_2:56981945-56981964 | Msa0079180:intron | 40.0% | |
TAAATGTCGAACTGTGACGA+GGG | + | chr1_2:56982021-56982040 | Msa0079180:intron | 40.0% | |
TTGACATAACCCAACATGAC+TGG | + | chr1_2:56982135-56982154 | Msa0079180:CDS | 40.0% | |
TGACATAACCCAACATGACT+GGG | + | chr1_2:56982136-56982155 | Msa0079180:CDS | 40.0% | |
ATGATGCTCGAAATTTGGCA+AGG | - | chr1_2:56982162-56982181 | None:intergenic | 40.0% | |
TCAGCATGATGCTCGAAATT+TGG | - | chr1_2:56982167-56982186 | None:intergenic | 40.0% | |
ACCTTCTTTCTTATGGCTAC+TGG | - | chr1_2:56982430-56982449 | None:intergenic | 40.0% | |
GTAGCCATAAGAAAGAAGGT+TGG | + | chr1_2:56982430-56982449 | Msa0079180:three_prime_UTR | 40.0% | |
AGAGGAACAAGATCGAGAAC+TGG | - | chr1_2:56977871-56977890 | None:intergenic | 45.0% | |
CCACGATGTAGTAACTGATG+AGG | - | chr1_2:56977916-56977935 | None:intergenic | 45.0% | |
CCTCATCAGTTACTACATCG+TGG | + | chr1_2:56977913-56977932 | Msa0079180:five_prime_UTR | 45.0% | |
!! | AATGGCGGAAGATCTGGTTT+TGG | + | chr1_2:56978068-56978087 | Msa0079180:exon | 45.0% |
GGCAAGTTATGCTTAGAGCT+CGG | + | chr1_2:56978319-56978338 | Msa0079180:intron | 45.0% | |
TGGTCTGTTGTTCGTTCCAA+AGG | + | chr1_2:56978694-56978713 | Msa0079180:CDS | 45.0% | |
GGTCTGTTGTTCGTTCCAAA+GGG | + | chr1_2:56978695-56978714 | Msa0079180:CDS | 45.0% | |
TCAGAGAACATCTGTGCTTG+TGG | - | chr1_2:56978734-56978753 | None:intergenic | 45.0% | |
GATGTTCTCTGATCCGAACA+TGG | + | chr1_2:56978742-56978761 | Msa0079180:CDS | 45.0% | |
!! | GGCAGACTCTTACTTTTGCT+TGG | + | chr1_2:56978935-56978954 | Msa0079180:intron | 45.0% |
TTGCAACACCGTAACATGAC+AGG | - | chr1_2:56979090-56979109 | None:intergenic | 45.0% | |
TCAAACTAGTTGTGACCCCT+TGG | - | chr1_2:56979320-56979339 | None:intergenic | 45.0% | |
CTCCCAATGTTGTCAAACAG+AGG | + | chr1_2:56980094-56980113 | Msa0079180:intron | 45.0% | |
TATAGCAGTGCTATCTGCTC+TGG | + | chr1_2:56980118-56980137 | Msa0079180:intron | 45.0% | |
! | GTGCTGCTATAGCCTCTATT+TGG | - | chr1_2:56980204-56980223 | None:intergenic | 45.0% |
ACAAGAGACGCAAAGATTGC+TGG | - | chr1_2:56980364-56980383 | None:intergenic | 45.0% | |
TTAACTGCCAGAGCAACTGT+TGG | - | chr1_2:56980418-56980437 | None:intergenic | 45.0% | |
TGTTCCTCTACTGCCACAAA+AGG | + | chr1_2:56980609-56980628 | Msa0079180:intron | 45.0% | |
! | CAATCCTTTTGTGGCAGTAG+AGG | - | chr1_2:56980616-56980635 | None:intergenic | 45.0% |
CTCTACTGCCACAAAAGGAT+TGG | + | chr1_2:56980614-56980633 | Msa0079180:intron | 45.0% | |
! | TATCGTGGCCAATCCTTTTG+TGG | - | chr1_2:56980625-56980644 | None:intergenic | 45.0% |
CCTAATTCTGGTAGCTATCG+TGG | - | chr1_2:56980640-56980659 | None:intergenic | 45.0% | |
CCACGATAGCTACCAGAATT+AGG | + | chr1_2:56980637-56980656 | Msa0079180:intron | 45.0% | |
CCTCTGTTCTAGCCTAATTC+TGG | - | chr1_2:56980652-56980671 | None:intergenic | 45.0% | |
CCAGAATTAGGCTAGAACAG+AGG | + | chr1_2:56980649-56980668 | Msa0079180:intron | 45.0% | |
GCTAGAACAGAGGTTGTTGT+TGG | + | chr1_2:56980659-56980678 | Msa0079180:intron | 45.0% | |
AGAAGCAGATAACAGAGGCA+AGG | - | chr1_2:56981142-56981161 | None:intergenic | 45.0% | |
AGCTAACATCAACTGTGCTG+AGG | - | chr1_2:56981248-56981267 | None:intergenic | 45.0% | |
CTCATCTTGGGGGAAGAAAA+TGG | + | chr1_2:56981399-56981418 | Msa0079180:CDS | 45.0% | |
AGAATGATGCAAATGGGTGG+TGG | + | chr1_2:56981579-56981598 | Msa0079180:CDS | 45.0% | |
!! | ATGCAAATGGGTGGTGGATT+CGG | + | chr1_2:56981585-56981604 | Msa0079180:CDS | 45.0% |
TGAGATATGGAGAAAGGGAG+GGG | - | chr1_2:56981713-56981732 | None:intergenic | 45.0% | |
GTGAGATATGGAGAAAGGGA+GGG | - | chr1_2:56981714-56981733 | None:intergenic | 45.0% | |
CCTCGTGAGATATGGAGAAA+GGG | - | chr1_2:56981718-56981737 | None:intergenic | 45.0% | |
TCCTCGTGAGATATGGAGAA+AGG | - | chr1_2:56981719-56981738 | None:intergenic | 45.0% | |
TTGGCTCCTTGCTGAGAAAT+TGG | + | chr1_2:56981913-56981932 | Msa0079180:intron | 45.0% | |
CTTGCTTGTATAGCATCCCA+AGG | - | chr1_2:56981946-56981965 | None:intergenic | 45.0% | |
CTTGGGATGCTATACAAGCA+AGG | + | chr1_2:56981944-56981963 | Msa0079180:intron | 45.0% | |
TGGGATGCTATACAAGCAAG+GGG | + | chr1_2:56981946-56981965 | Msa0079180:intron | 45.0% | |
CTATACAAGCAAGGGGTTCA+GGG | + | chr1_2:56981953-56981972 | Msa0079180:intron | 45.0% | |
GTAAATGTCGAACTGTGACG+AGG | + | chr1_2:56982020-56982039 | Msa0079180:intron | 45.0% | |
AAATGTCGAACTGTGACGAG+GGG | + | chr1_2:56982022-56982041 | Msa0079180:intron | 45.0% | |
! | TCTTTTGCCAAGGATGGCAA+AGG | - | chr1_2:56982288-56982307 | None:intergenic | 45.0% |
GCCAGTAGCCATAAGAAAGA+AGG | + | chr1_2:56982426-56982445 | Msa0079180:three_prime_UTR | 45.0% | |
!!! | TTTAATTTTTTGTATATATA+CGG | + | chr1_2:56979117-56979136 | Msa0079180:intron | 5.0% |
CTATCGAAAGACGAGGTTGC+CGG | + | chr1_2:56977825-56977844 | Msa0079180:five_prime_UTR | 50.0% | |
GATCGATTGTGTGACACAGC+CGG | - | chr1_2:56977847-56977866 | None:intergenic | 50.0% | |
TTGGGAAGAACGCAGAAGCT+TGG | - | chr1_2:56978172-56978191 | None:intergenic | 50.0% | |
AGCTCGGAATTTACGTGCTG+CGG | + | chr1_2:56978335-56978354 | Msa0079180:CDS | 50.0% | |
GGGCACGAAAAGCCTTAGAA+GGG | - | chr1_2:56978371-56978390 | None:intergenic | 50.0% | |
CATCTGTGCTTGTGGATTCG+TGG | - | chr1_2:56978726-56978745 | None:intergenic | 50.0% | |
GGATCATGTTTGGTTGCCGT+TGG | + | chr1_2:56980014-56980033 | Msa0079180:intron | 50.0% | |
TGCTATCTGCTCTGGCATAG+CGG | + | chr1_2:56980126-56980145 | Msa0079180:intron | 50.0% | |
GAGACGCAAAGATTGCTGGA+AGG | - | chr1_2:56980360-56980379 | None:intergenic | 50.0% | |
TCTCTTGTGTGTGCAGACGT+TGG | + | chr1_2:56980376-56980395 | Msa0079180:intron | 50.0% | |
! | AACTGTTGGTTAGGGTGGCT+GGG | - | chr1_2:56980404-56980423 | None:intergenic | 50.0% |
! | AGAGCAACTGTTGGTTAGGG+TGG | - | chr1_2:56980409-56980428 | None:intergenic | 50.0% |
ACCCTAACCAACAGTTGCTC+TGG | + | chr1_2:56980408-56980427 | Msa0079180:intron | 50.0% | |
! | GCCAGAGCAACTGTTGGTTA+GGG | - | chr1_2:56980412-56980431 | None:intergenic | 50.0% |
! | TGCCAGAGCAACTGTTGGTT+AGG | - | chr1_2:56980413-56980432 | None:intergenic | 50.0% |
AGTTGCTCTGGCAGTTAACC+AGG | + | chr1_2:56980420-56980439 | Msa0079180:intron | 50.0% | |
CTTCAACGAAGGAGTCTTCC+TGG | - | chr1_2:56980441-56980460 | None:intergenic | 50.0% | |
! | GTAAAAATGGGGGGCACAGA+GGG | - | chr1_2:56980505-56980524 | None:intergenic | 50.0% |
! | GTAGAGGAACAGAGTTGGTC+TGG | - | chr1_2:56980600-56980619 | None:intergenic | 50.0% |
TGGCAGTAGAGGAACAGAGT+TGG | - | chr1_2:56980605-56980624 | None:intergenic | 50.0% | |
AGATATGGAGAAAGGGAGGG+GGG | - | chr1_2:56981711-56981730 | None:intergenic | 50.0% | |
GAGATATGGAGAAAGGGAGG+GGG | - | chr1_2:56981712-56981731 | None:intergenic | 50.0% | |
CGTGAGATATGGAGAAAGGG+AGG | - | chr1_2:56981715-56981734 | None:intergenic | 50.0% | |
CCCTTTCTCCATATCTCACG+AGG | + | chr1_2:56981715-56981734 | Msa0079180:intron | 50.0% | |
GCTATACAAGCAAGGGGTTC+AGG | + | chr1_2:56981952-56981971 | Msa0079180:intron | 50.0% | |
CGGGCACGAAAAGCCTTAGA+AGG | - | chr1_2:56978372-56978391 | None:intergenic | 55.0% | |
GTGCTTGTGGATTCGTGGCT+TGG | - | chr1_2:56978721-56978740 | None:intergenic | 55.0% | |
CTCTGATCCGAACATGGCCA+TGG | + | chr1_2:56978748-56978767 | Msa0079180:CDS | 55.0% | |
AGGAAGGGAAGAAGGAAGGG+GGG | - | chr1_2:56980302-56980321 | None:intergenic | 55.0% | |
GAGGAAGGGAAGAAGGAAGG+GGG | - | chr1_2:56980303-56980322 | None:intergenic | 55.0% | |
GGAGGAAGGGAAGAAGGAAG+GGG | - | chr1_2:56980304-56980323 | None:intergenic | 55.0% | |
CGGAGGAAGGGAAGAAGGAA+GGG | - | chr1_2:56980305-56980324 | None:intergenic | 55.0% | |
! | CAACTGTTGGTTAGGGTGGC+TGG | - | chr1_2:56980405-56980424 | None:intergenic | 55.0% |
! | CGTAAAAATGGGGGGCACAG+AGG | - | chr1_2:56980506-56980525 | None:intergenic | 55.0% |
ACAAGCAAGGGGTTCAGGGT+AGG | + | chr1_2:56981957-56981976 | Msa0079180:intron | 55.0% | |
TGGCAAGGCCCAGTCATGTT+GGG | - | chr1_2:56982147-56982166 | None:intergenic | 55.0% | |
TTGGCAAGGCCCAGTCATGT+TGG | - | chr1_2:56982148-56982167 | None:intergenic | 55.0% | |
GGTTGGACCTTTGCCATCCT+TGG | + | chr1_2:56982278-56982297 | Msa0079180:three_prime_UTR | 55.0% | |
ATGTGCAGAGTAGGGCTTCG+CGG | - | chr1_2:56982540-56982559 | None:intergenic | 55.0% | |
GCGCGATGCGTCACAAACAG+AGG | - | chr1_2:56977889-56977908 | None:intergenic | 60.0% | |
! | GGATTCGTGGCTTGGCCCTT+TGG | - | chr1_2:56978713-56978732 | None:intergenic | 60.0% |
GCGGAGGAAGGGAAGAAGGA+AGG | - | chr1_2:56980306-56980325 | None:intergenic | 60.0% | |
TGCTGGAAGGAGACTCGCAG+CGG | - | chr1_2:56980347-56980366 | None:intergenic | 60.0% | |
AGTGGTGCAGGTGCAGCCTT+GGG | - | chr1_2:56980475-56980494 | None:intergenic | 60.0% | |
AAGTGGTGCAGGTGCAGCCT+TGG | - | chr1_2:56980476-56980495 | None:intergenic | 60.0% | |
! | AAATGGGGGGCACAGAGGGA+GGG | - | chr1_2:56980501-56980520 | None:intergenic | 60.0% |
! | AAAATGGGGGGCACAGAGGG+AGG | - | chr1_2:56980502-56980521 | None:intergenic | 60.0% |
GCTATGTCAGCAGTCGCTCC+TGG | + | chr1_2:56981265-56981284 | Msa0079180:CDS | 60.0% | |
ACTCGCAGCGGCCAGGGAAA+GGG | - | chr1_2:56980335-56980354 | None:intergenic | 65.0% | |
AAGGAGACTCGCAGCGGCCA+GGG | - | chr1_2:56980341-56980360 | None:intergenic | 65.0% | |
GTGGTGCAGGTGCAGCCTTG+GGG | - | chr1_2:56980474-56980493 | None:intergenic | 65.0% | |
! | AATGGGGGGCACAGAGGGAG+GGG | - | chr1_2:56980500-56980519 | None:intergenic | 65.0% |
GCGGGCGGAGGAAGGGAAGA+AGG | - | chr1_2:56980310-56980329 | None:intergenic | 70.0% | |
! | AAGGGGTGCGGGCGGAGGAA+GGG | - | chr1_2:56980317-56980336 | None:intergenic | 70.0% |
! | AAAGGGGTGCGGGCGGAGGA+AGG | - | chr1_2:56980318-56980337 | None:intergenic | 70.0% |
AGCGGCCAGGGAAAGGGGTG+CGG | - | chr1_2:56980329-56980348 | None:intergenic | 70.0% | |
CTCGCAGCGGCCAGGGAAAG+GGG | - | chr1_2:56980334-56980353 | None:intergenic | 70.0% | |
GACTCGCAGCGGCCAGGGAA+AGG | - | chr1_2:56980336-56980355 | None:intergenic | 70.0% | |
GAAGGAGACTCGCAGCGGCC+AGG | - | chr1_2:56980342-56980361 | None:intergenic | 70.0% | |
GAGGGAGGGGGAAGTGGTGC+AGG | - | chr1_2:56980487-56980506 | None:intergenic | 70.0% | |
GGCACAGAGGGAGGGGGAAG+TGG | - | chr1_2:56980493-56980512 | None:intergenic | 70.0% | |
! | ATGGGGGGCACAGAGGGAGG+GGG | - | chr1_2:56980499-56980518 | None:intergenic | 70.0% |
! | AGGGAAAGGGGTGCGGGCGG+AGG | - | chr1_2:56980322-56980341 | None:intergenic | 75.0% |
TCCGCCCGCACCCCTTTCCC+TGG | + | chr1_2:56980321-56980340 | Msa0079180:intron | 75.0% | |
! | GCCAGGGAAAGGGGTGCGGG+CGG | - | chr1_2:56980325-56980344 | None:intergenic | 75.0% |
! | GCGGCCAGGGAAAGGGGTGC+GGG | - | chr1_2:56980328-56980347 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 56977730 | 56982564 | 56977730 | ID=Msa0079180;Name=Msa0079180 |
chr1_2 | mRNA | 56977730 | 56982564 | 56977730 | ID=Msa0079180-mRNA-1;Parent=Msa0079180;Name=Msa0079180-mRNA-1;_AED=0.11;_eAED=0.11;_QI=224|1|1|1|0.87|0.77|9|350|247 |
chr1_2 | exon | 56977730 | 56977934 | 56977730 | ID=Msa0079180-mRNA-1:exon:17927;Parent=Msa0079180-mRNA-1 |
chr1_2 | exon | 56978050 | 56978220 | 56978050 | ID=Msa0079180-mRNA-1:exon:17928;Parent=Msa0079180-mRNA-1 |
chr1_2 | exon | 56978320 | 56978413 | 56978320 | ID=Msa0079180-mRNA-1:exon:17929;Parent=Msa0079180-mRNA-1 |
chr1_2 | exon | 56978689 | 56978808 | 56978689 | ID=Msa0079180-mRNA-1:exon:17930;Parent=Msa0079180-mRNA-1 |
chr1_2 | exon | 56978940 | 56978988 | 56978940 | ID=Msa0079180-mRNA-1:exon:17931;Parent=Msa0079180-mRNA-1 |
chr1_2 | exon | 56981187 | 56981286 | 56981187 | ID=Msa0079180-mRNA-1:exon:17932;Parent=Msa0079180-mRNA-1 |
chr1_2 | exon | 56981359 | 56981420 | 56981359 | ID=Msa0079180-mRNA-1:exon:17933;Parent=Msa0079180-mRNA-1 |
chr1_2 | exon | 56981562 | 56981623 | 56981562 | ID=Msa0079180-mRNA-1:exon:17934;Parent=Msa0079180-mRNA-1 |
chr1_2 | exon | 56982110 | 56982564 | 56982110 | ID=Msa0079180-mRNA-1:exon:17935;Parent=Msa0079180-mRNA-1 |
chr1_2 | five_prime_UTR | 56977730 | 56977934 | 56977730 | ID=Msa0079180-mRNA-1:five_prime_utr;Parent=Msa0079180-mRNA-1 |
chr1_2 | five_prime_UTR | 56978050 | 56978068 | 56978050 | ID=Msa0079180-mRNA-1:five_prime_utr;Parent=Msa0079180-mRNA-1 |
chr1_2 | CDS | 56978069 | 56978220 | 56978069 | ID=Msa0079180-mRNA-1:cds;Parent=Msa0079180-mRNA-1 |
chr1_2 | CDS | 56978320 | 56978413 | 56978320 | ID=Msa0079180-mRNA-1:cds;Parent=Msa0079180-mRNA-1 |
chr1_2 | CDS | 56978689 | 56978808 | 56978689 | ID=Msa0079180-mRNA-1:cds;Parent=Msa0079180-mRNA-1 |
chr1_2 | CDS | 56978940 | 56978988 | 56978940 | ID=Msa0079180-mRNA-1:cds;Parent=Msa0079180-mRNA-1 |
chr1_2 | CDS | 56981187 | 56981286 | 56981187 | ID=Msa0079180-mRNA-1:cds;Parent=Msa0079180-mRNA-1 |
chr1_2 | CDS | 56981359 | 56981420 | 56981359 | ID=Msa0079180-mRNA-1:cds;Parent=Msa0079180-mRNA-1 |
chr1_2 | CDS | 56981562 | 56981623 | 56981562 | ID=Msa0079180-mRNA-1:cds;Parent=Msa0079180-mRNA-1 |
chr1_2 | CDS | 56982110 | 56982214 | 56982110 | ID=Msa0079180-mRNA-1:cds;Parent=Msa0079180-mRNA-1 |
chr1_2 | three_prime_UTR | 56982215 | 56982564 | 56982215 | ID=Msa0079180-mRNA-1:three_prime_utr;Parent=Msa0079180-mRNA-1 |
Gene Sequence |
Protein sequence |