Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0636350 | XP_013442399.1 | 97.240 | 471 | 12 | 1 | 1 | 470 | 1 | 471 | 0.0 | 953 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0636350 | sp|Q09131|PPAF_SOYBN | 83.036 | 448 | 76 | 0 | 23 | 470 | 17 | 464 | 0.0 | 795 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0636350 | Msa0675690 | 0.833596 | 4.871481e-56 | -8.615850e-47 |
| Msa0597040 | Msa0636350 | 0.843339 | 1.489026e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0636350 | MtrunA17_Chr4g0019091 | 87.500 | 448 | 56 | 0 | 23 | 470 | 18 | 465 | 0.0 | 835 |
| Msa0636350 | MtrunA17_Chr1g0211041 | 83.656 | 465 | 75 | 1 | 7 | 470 | 3 | 467 | 0.0 | 805 |
| Msa0636350 | MtrunA17_Chr4g0019071 | 98.026 | 304 | 6 | 0 | 167 | 470 | 39 | 342 | 0.0 | 631 |
| Msa0636350 | MtrunA17_Chr4g0064541 | 61.574 | 432 | 163 | 2 | 28 | 458 | 23 | 452 | 0.0 | 557 |
| Msa0636350 | MtrunA17_Chr3g0098721 | 42.212 | 443 | 220 | 14 | 14 | 453 | 1 | 410 | 1.92e-102 | 313 |
| Msa0636350 | MtrunA17_Chr5g0443881 | 40.227 | 440 | 230 | 11 | 30 | 467 | 22 | 430 | 1.04e-99 | 306 |
| Msa0636350 | MtrunA17_Chr4g0019081 | 88.824 | 170 | 18 | 1 | 1 | 169 | 1 | 170 | 2.01e-99 | 295 |
| Msa0636350 | MtrunA17_Chr7g0266151 | 40.449 | 445 | 226 | 13 | 22 | 461 | 14 | 424 | 7.92e-96 | 295 |
| Msa0636350 | MtrunA17_Chr1g0178831 | 41.772 | 395 | 203 | 8 | 60 | 453 | 46 | 414 | 2.02e-95 | 295 |
| Msa0636350 | MtrunA17_Chr7g0266131 | 41.266 | 395 | 205 | 8 | 60 | 453 | 54 | 422 | 1.11e-93 | 290 |
| Msa0636350 | MtrunA17_Chr3g0121411 | 37.313 | 402 | 177 | 9 | 114 | 456 | 143 | 528 | 2.64e-75 | 246 |
| Msa0636350 | MtrunA17_Chr3g0121431 | 36.816 | 402 | 179 | 8 | 114 | 456 | 198 | 583 | 5.30e-74 | 244 |
| Msa0636350 | MtrunA17_Chr7g0236041 | 34.862 | 436 | 202 | 10 | 87 | 456 | 108 | 527 | 1.76e-73 | 241 |
| Msa0636350 | MtrunA17_Chr6g0453731 | 32.427 | 478 | 231 | 12 | 41 | 442 | 52 | 513 | 8.63e-73 | 240 |
| Msa0636350 | MtrunA17_Chr4g0022251 | 27.604 | 384 | 213 | 16 | 60 | 396 | 216 | 581 | 1.66e-26 | 112 |
| Msa0636350 | MtrunA17_Chr1g0173511 | 25.310 | 403 | 214 | 17 | 58 | 396 | 77 | 456 | 2.83e-23 | 102 |
| Msa0636350 | MtrunA17_Chr3g0116051 | 26.923 | 364 | 219 | 15 | 118 | 448 | 249 | 598 | 3.79e-23 | 102 |
| Msa0636350 | MtrunA17_Chr4g0043001 | 25.901 | 444 | 260 | 15 | 59 | 445 | 143 | 574 | 4.50e-23 | 102 |
| Msa0636350 | MtrunA17_Chr4g0057551 | 27.224 | 371 | 209 | 17 | 118 | 448 | 253 | 602 | 6.69e-22 | 99.0 |
| Msa0636350 | MtrunA17_Chr5g0419621 | 26.400 | 375 | 207 | 15 | 118 | 448 | 245 | 594 | 1.52e-21 | 97.8 |
| Msa0636350 | MtrunA17_Chr8g0364481 | 25.683 | 366 | 221 | 14 | 118 | 448 | 238 | 587 | 5.17e-21 | 96.3 |
| Msa0636350 | MtrunA17_Chr4g0043021 | 24.888 | 446 | 260 | 17 | 60 | 445 | 144 | 574 | 6.42e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0636350 | AT2G16430.2 | 75.431 | 464 | 113 | 1 | 1 | 464 | 1 | 463 | 0.0 | 746 |
| Msa0636350 | AT2G27190.1 | 69.670 | 455 | 133 | 1 | 4 | 458 | 9 | 458 | 0.0 | 676 |
| Msa0636350 | AT1G56360.1 | 63.557 | 461 | 159 | 4 | 9 | 463 | 1 | 458 | 0.0 | 613 |
| Msa0636350 | AT4G36350.1 | 62.500 | 456 | 163 | 4 | 13 | 463 | 6 | 458 | 0.0 | 602 |
| Msa0636350 | AT2G16430.1 | 80.712 | 337 | 65 | 0 | 128 | 464 | 7 | 343 | 0.0 | 587 |
| Msa0636350 | AT5G34850.1 | 58.499 | 453 | 182 | 3 | 7 | 458 | 4 | 451 | 0.0 | 555 |
| Msa0636350 | AT2G18130.1 | 55.411 | 462 | 180 | 5 | 6 | 464 | 2 | 440 | 0.0 | 523 |
| Msa0636350 | AT3G46120.1 | 47.930 | 459 | 152 | 9 | 7 | 458 | 3 | 381 | 9.49e-139 | 404 |
| Msa0636350 | AT1G52940.1 | 60.833 | 240 | 89 | 4 | 49 | 285 | 4 | 241 | 7.73e-104 | 310 |
| Msa0636350 | AT3G20500.1 | 40.766 | 444 | 226 | 12 | 12 | 453 | 6 | 414 | 1.54e-98 | 303 |
| Msa0636350 | AT3G52820.1 | 41.919 | 396 | 201 | 8 | 60 | 453 | 47 | 415 | 2.54e-96 | 297 |
| Msa0636350 | AT3G52810.1 | 39.207 | 454 | 237 | 10 | 4 | 453 | 1 | 419 | 2.93e-92 | 287 |
| Msa0636350 | AT3G52780.1 | 40.181 | 443 | 229 | 13 | 16 | 453 | 5 | 416 | 1.72e-91 | 285 |
| Msa0636350 | AT3G07130.1 | 35.476 | 420 | 198 | 11 | 94 | 456 | 115 | 518 | 2.26e-72 | 238 |
| Msa0636350 | AT2G32770.3 | 30.682 | 528 | 241 | 14 | 24 | 442 | 12 | 523 | 2.69e-66 | 223 |
| Msa0636350 | AT3G07130.2 | 32.892 | 453 | 198 | 12 | 94 | 456 | 115 | 551 | 1.38e-65 | 221 |
| Msa0636350 | AT4G13700.1 | 33.806 | 423 | 213 | 14 | 34 | 407 | 33 | 437 | 5.62e-63 | 211 |
| Msa0636350 | AT3G52780.2 | 37.784 | 352 | 194 | 12 | 16 | 362 | 5 | 336 | 2.95e-59 | 199 |
| Msa0636350 | AT2G32770.2 | 33.246 | 382 | 175 | 9 | 112 | 428 | 62 | 428 | 3.54e-58 | 198 |
| Msa0636350 | AT2G32770.1 | 28.220 | 528 | 225 | 15 | 24 | 442 | 12 | 494 | 1.65e-52 | 185 |
| Msa0636350 | AT4G13700.2 | 32.800 | 375 | 196 | 13 | 34 | 359 | 33 | 400 | 5.38e-51 | 178 |
| Msa0636350 | AT5G50400.2 | 26.124 | 356 | 222 | 15 | 118 | 443 | 165 | 509 | 9.13e-22 | 98.6 |
| Msa0636350 | AT5G50400.1 | 25.843 | 356 | 223 | 14 | 118 | 443 | 237 | 581 | 1.00e-21 | 98.6 |
| Msa0636350 | AT1G13750.1 | 27.945 | 365 | 204 | 15 | 118 | 443 | 239 | 583 | 1.64e-21 | 98.2 |
| Msa0636350 | AT2G03450.1 | 25.828 | 453 | 249 | 18 | 58 | 445 | 141 | 571 | 2.19e-20 | 94.7 |
| Msa0636350 | AT1G13900.1 | 25.926 | 378 | 211 | 13 | 118 | 445 | 213 | 571 | 8.18e-20 | 92.8 |
| Msa0636350 | AT4G24890.1 | 25.275 | 364 | 225 | 15 | 118 | 448 | 241 | 590 | 7.39e-19 | 90.1 |
Find 106 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTGGAAGCTTACAATTTC+TGG | 0.082605 | 4_3:+26383375 | None:intergenic |
| AATATGATTTGAACAATTAA+TGG | 0.157365 | 4_3:+26385769 | None:intergenic |
| ATCTCCGATGTTTATGTATA+CGG | 0.235623 | 4_3:+26382190 | None:intergenic |
| TCCAACCTCATAATAATATT+TGG | 0.245668 | 4_3:+26384421 | None:intergenic |
| TTGCTTATCAACCTTGGATA+TGG | 0.250325 | 4_3:-26383428 | Msa0636350:CDS |
| GGTCGGATGCAGTGCGTTAC+TGG | 0.268473 | 4_3:-26384647 | Msa0636350:CDS |
| GTACTTTGTGATGCTTTATA+AGG | 0.272518 | 4_3:+26383195 | None:intergenic |
| ATTGCATATAATATCGTAAA+TGG | 0.285493 | 4_3:-26382245 | Msa0636350:CDS |
| TTATTCATCATGCCACTATA+AGG | 0.295631 | 4_3:-26384548 | Msa0636350:CDS |
| ATTTGAACAATTAATGGAAT+TGG | 0.296827 | 4_3:+26385775 | None:intergenic |
| CACAAAGTACTTCACCCTTT+TGG | 0.304317 | 4_3:-26383182 | Msa0636350:CDS |
| AGAACACAACAAGGCAGTTT+TGG | 0.305509 | 4_3:-26384394 | Msa0636350:CDS |
| CTGGAGCAAAATCAAGTTCA+TGG | 0.316555 | 4_3:+26383394 | None:intergenic |
| GTGATGCTTTATAAGGAGTA+TGG | 0.325433 | 4_3:+26383202 | None:intergenic |
| TTGAGATATATACACTCATT+TGG | 0.334482 | 4_3:-26385700 | Msa0636350:five_prime_UTR |
| AAAGTTGATGTTGTGTTTGC+TGG | 0.344435 | 4_3:-26382430 | Msa0636350:CDS |
| ACAATGTTCGGTGGGATACT+TGG | 0.352931 | 4_3:-26383473 | Msa0636350:CDS |
| TACCTTCAAATTCCTTATAG+TGG | 0.355504 | 4_3:+26384536 | None:intergenic |
| TCAATGGGAACCATGAGGTT+TGG | 0.378926 | 4_3:+26381623 | None:intergenic |
| CACCGAACATTGTCATGATT+CGG | 0.383335 | 4_3:+26383483 | None:intergenic |
| TTGGCCTCTTATTCAGCATA+TGG | 0.385427 | 4_3:-26383123 | Msa0636350:intron |
| GTATGGTATCGGTGCGAAAA+AGG | 0.385639 | 4_3:+26383219 | None:intergenic |
| AATTTGGTGTTTGTGTGTAA+TGG | 0.386262 | 4_3:-26385590 | Msa0636350:CDS |
| TTTATTATTATCACTAGGTT+TGG | 0.389492 | 4_3:-26385618 | Msa0636350:CDS |
| AGATACTTCAATTACTCATC+TGG | 0.391362 | 4_3:-26384573 | Msa0636350:CDS |
| CCATACACATTTGGTCTCAT+AGG | 0.391563 | 4_3:-26384338 | Msa0636350:intron |
| TTTACAACTCCTCCTGCAAT+TGG | 0.394407 | 4_3:-26384371 | Msa0636350:CDS |
| GCATTTAGAGAAGCCAGCTT+TGG | 0.397912 | 4_3:-26381774 | Msa0636350:CDS |
| GAAAATGATAATCTTTGAAA+TGG | 0.399082 | 4_3:+26385644 | None:intergenic |
| CTGTTAAGAGTGATTCCCTT+TGG | 0.403017 | 4_3:-26381680 | Msa0636350:CDS |
| CCAAATGTGTATGGCACATC+AGG | 0.405903 | 4_3:+26384347 | None:intergenic |
| TGAGATATATACACTCATTT+GGG | 0.409563 | 4_3:-26385699 | Msa0636350:five_prime_UTR |
| TCACATTGAGTATTCTTCAA+TGG | 0.418937 | 4_3:+26381607 | None:intergenic |
| CACATTGAGTATTCTTCAAT+GGG | 0.419089 | 4_3:+26381608 | None:intergenic |
| AAGAGCTACCGAGAGTTAAC+AGG | 0.420226 | 4_3:-26382570 | Msa0636350:CDS |
| CCTGATGTGCCATACACATT+TGG | 0.422920 | 4_3:-26384347 | Msa0636350:CDS |
| GGCACATCAGGACCAATTGC+AGG | 0.425315 | 4_3:+26384359 | None:intergenic |
| TGGTTATAATGCTCCTCAAC+AGG | 0.425812 | 4_3:-26385486 | Msa0636350:intron |
| TGAGGTTTGGAATCATCAAC+CGG | 0.433017 | 4_3:+26381636 | None:intergenic |
| AATACCATATGCTGAATAAG+AGG | 0.452626 | 4_3:+26383119 | None:intergenic |
| ACCAAATATTATTATGAGGT+TGG | 0.454862 | 4_3:-26384422 | Msa0636350:CDS |
| CAATGTTCGGTGGGATACTT+GGG | 0.455598 | 4_3:-26383472 | Msa0636350:CDS |
| AGTGTGGAATATTCAGATAA+GGG | 0.466665 | 4_3:+26385803 | None:intergenic |
| ACCCGAATCATGACAATGTT+CGG | 0.470192 | 4_3:-26383485 | Msa0636350:CDS |
| TTCAGCACACATCATTGTCT+TGG | 0.481429 | 4_3:-26383142 | Msa0636350:CDS |
| TCTCTAAATGCTGAGTACTC+TGG | 0.496127 | 4_3:+26381786 | None:intergenic |
| AGCACAAGAAGCTAGCTAAA+GGG | 0.498611 | 4_3:-26384611 | Msa0636350:CDS |
| CAATACCAAATATTATTATG+AGG | 0.502409 | 4_3:-26384426 | Msa0636350:CDS |
| ACCGAACATTGTCATGATTC+GGG | 0.506106 | 4_3:+26383484 | None:intergenic |
| CCTATGAGACCAAATGTGTA+TGG | 0.507863 | 4_3:+26384338 | None:intergenic |
| GGACACATGCTTACTATAGC+TGG | 0.509099 | 4_3:-26381725 | Msa0636350:CDS |
| CAACCTTGGATATGGACTGT+TGG | 0.510685 | 4_3:-26383420 | Msa0636350:CDS |
| TAGTGTGGAATATTCAGATA+AGG | 0.513190 | 4_3:+26385802 | None:intergenic |
| TATCAATTGAATTCAACAAA+AGG | 0.519489 | 4_3:-26383552 | Msa0636350:CDS |
| AAGCACAAGAAGCTAGCTAA+AGG | 0.523147 | 4_3:-26384612 | Msa0636350:CDS |
| TCTCCGATGTTTATGTATAC+GGG | 0.526279 | 4_3:+26382191 | None:intergenic |
| TGAGAGTAATGTTTGAGTCA+TGG | 0.529431 | 4_3:-26382465 | Msa0636350:CDS |
| GGAGTGTTGCTTATCAACCT+TGG | 0.535303 | 4_3:-26383434 | Msa0636350:CDS |
| TGTTCAAGCCACACATATTG+TGG | 0.537471 | 4_3:+26382592 | None:intergenic |
| TGCCACTATAAGGAATTTGA+AGG | 0.542571 | 4_3:-26384538 | Msa0636350:intron |
| ATCTTTCGTAGGCATGTACA+TGG | 0.549448 | 4_3:+26382407 | None:intergenic |
| ACAGCTATCATTACATGGAA+GGG | 0.559696 | 4_3:-26382495 | Msa0636350:CDS |
| AACAGCTATCATTACATGGA+AGG | 0.564929 | 4_3:-26382496 | Msa0636350:CDS |
| TGGGTGACAGAGGATGAACC+AGG | 0.567319 | 4_3:-26384669 | Msa0636350:CDS |
| TACATAAACATCGGAGATGG+AGG | 0.568213 | 4_3:-26382185 | Msa0636350:CDS |
| AATGCTGAGTACTCTGGCTG+TGG | 0.569296 | 4_3:+26381792 | None:intergenic |
| CTTTATAAGGAGTATGGTAT+CGG | 0.573117 | 4_3:+26383208 | None:intergenic |
| AATGGAATTGGCATATAGTG+TGG | 0.573258 | 4_3:+26385787 | None:intergenic |
| TTCGGTGGGATACTTGGGGA+AGG | 0.580992 | 4_3:-26383467 | Msa0636350:CDS |
| CAGCTATCATTACATGGAAG+GGG | 0.582038 | 4_3:-26382494 | Msa0636350:CDS |
| TTGTTCTCATGCATTCACCT+TGG | 0.582761 | 4_3:-26382528 | Msa0636350:CDS |
| GTTGATGATTCCAAACCTCA+TGG | 0.582800 | 4_3:-26381633 | Msa0636350:CDS |
| TAGCAACAGCTATCATTACA+TGG | 0.590375 | 4_3:-26382500 | Msa0636350:CDS |
| TTGGTGTTTGTGTGTAATGG+AGG | 0.590798 | 4_3:-26385587 | Msa0636350:CDS |
| TAACGCACTGCATCCGACCC+TGG | 0.593203 | 4_3:+26384651 | None:intergenic |
| GAAAGCAGTGATCGTATCGT+GGG | 0.600675 | 4_3:-26384688 | Msa0636350:CDS |
| GACAGAGGATGAACCAGGGT+CGG | 0.603361 | 4_3:-26384664 | Msa0636350:CDS |
| GTATACATAAACATCGGAGA+TGG | 0.606702 | 4_3:-26382188 | Msa0636350:CDS |
| GATCGTATCGTGGGTGACAG+AGG | 0.610705 | 4_3:-26384679 | Msa0636350:CDS |
| CTTGGGGAAGGTTTGCAGAG+AGG | 0.615319 | 4_3:-26383455 | Msa0636350:CDS |
| ATAACACAAGGTGATCATGT+GGG | 0.617402 | 4_3:-26384711 | Msa0636350:CDS |
| TTTCCAACAGTCCATATCCA+AGG | 0.618073 | 4_3:+26383417 | None:intergenic |
| TATAACACAAGGTGATCATG+TGG | 0.618384 | 4_3:-26384712 | Msa0636350:CDS |
| GGAAAGCAGTGATCGTATCG+TGG | 0.618795 | 4_3:-26384689 | Msa0636350:CDS |
| TAACACAAGGTGATCATGTG+GGG | 0.622210 | 4_3:-26384710 | Msa0636350:CDS |
| GTGTGGAATATTCAGATAAG+GGG | 0.622272 | 4_3:+26385804 | None:intergenic |
| CGAATCATGACAATGTTCGG+TGG | 0.623010 | 4_3:-26383482 | Msa0636350:CDS |
| GAATCATGACAATGTTCGGT+GGG | 0.624923 | 4_3:-26383481 | Msa0636350:CDS |
| AATATACACCACAATATGTG+TGG | 0.629831 | 4_3:-26382600 | Msa0636350:CDS |
| AGTACTTACAGATCTTTCGT+AGG | 0.631526 | 4_3:+26382396 | None:intergenic |
| TCTAGTTTATTATTATCACT+AGG | 0.632946 | 4_3:-26385623 | Msa0636350:CDS |
| AGCTGGCATAGAAATCAAGA+TGG | 0.638512 | 4_3:-26381708 | Msa0636350:CDS |
| GGAGATGGAGGGAATATCGA+AGG | 0.640067 | 4_3:-26382173 | Msa0636350:CDS |
| ACATAAACATCGGAGATGGA+GGG | 0.656509 | 4_3:-26382184 | Msa0636350:CDS |
| TGTTGAGGAGCATTATAACC+AGG | 0.661090 | 4_3:+26385488 | None:intergenic |
| ACCAAGGTTCATATAACACA+AGG | 0.668770 | 4_3:-26384723 | Msa0636350:intron |
| GAGGTTTGGAATCATCAACC+GGG | 0.673172 | 4_3:+26381637 | None:intergenic |
| ATTCTTCAATGGGAACCATG+AGG | 0.678851 | 4_3:+26381618 | None:intergenic |
| TGCATGAGAACAATCAACCA+AGG | 0.682000 | 4_3:+26382538 | None:intergenic |
| ACATCAGGACCAATTGCAGG+AGG | 0.687083 | 4_3:+26384362 | None:intergenic |
| TAGCTGTTGCTATTATACCA+AGG | 0.710700 | 4_3:+26382511 | None:intergenic |
| AATGTTCGGTGGGATACTTG+GGG | 0.718230 | 4_3:-26383471 | Msa0636350:CDS |
| GCTCCCGTATACATAAACAT+CGG | 0.723543 | 4_3:-26382194 | Msa0636350:CDS |
| GGGTGACAGAGGATGAACCA+GGG | 0.727268 | 4_3:-26384668 | Msa0636350:CDS |
| TTGGACTTAAGAACACAACA+AGG | 0.748770 | 4_3:-26384403 | Msa0636350:CDS |
| TGAGGAGCATTATAACCAGG+AGG | 0.752719 | 4_3:+26385491 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATATGTTTTTAAATCA+CGG | - | chr4_3:26381965-26381984 | Msa0636350:intron | 10.0% |
| !! | AGAATTGTAATAAAAATTTA+GGG | - | chr4_3:26382211-26382230 | Msa0636350:CDS | 10.0% |
| !!! | TTATTTAATTTTTAACTTCA+GGG | + | chr4_3:26384586-26384605 | None:intergenic | 10.0% |
| !!! | TTTATTTAATTTTTAACTTC+AGG | + | chr4_3:26384587-26384606 | None:intergenic | 10.0% |
| !! | AATATGATTTGAACAATTAA+TGG | + | chr4_3:26381617-26381636 | None:intergenic | 15.0% |
| !! | AACAGAAATTCAATATAAAA+TGG | + | chr4_3:26382075-26382094 | None:intergenic | 15.0% |
| !! | GAGAATTGTAATAAAAATTT+AGG | - | chr4_3:26382210-26382229 | Msa0636350:CDS | 15.0% |
| !! | ATTCTTGATATTATAAAGAA+TGG | - | chr4_3:26382254-26382273 | Msa0636350:CDS | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | + | chr4_3:26382469-26382488 | None:intergenic | 15.0% |
| !!! | TGATTTTCTCAAATTATTAA+CGG | + | chr4_3:26383209-26383228 | None:intergenic | 15.0% |
| !!! | CAAATTAAATCGATTTATAT+TGG | + | chr4_3:26384028-26384047 | None:intergenic | 15.0% |
| !!! | CAATATAAATCGATTTAATT+TGG | - | chr4_3:26384026-26384045 | Msa0636350:intron | 15.0% |
| !!! | TTTCAAAATATTTTGTGAAA+AGG | + | chr4_3:26385035-26385054 | None:intergenic | 15.0% |
| !! | ATTTGAACAATTAATGGAAT+TGG | + | chr4_3:26381611-26381630 | None:intergenic | 20.0% |
| !!! | GAAAATGATAATCTTTGAAA+TGG | + | chr4_3:26381742-26381761 | None:intergenic | 20.0% |
| !!! | TCTAGTTTATTATTATCACT+AGG | - | chr4_3:26381760-26381779 | Msa0636350:CDS | 20.0% |
| !! | TTTATTATTATCACTAGGTT+TGG | - | chr4_3:26381765-26381784 | Msa0636350:CDS | 20.0% |
| !! | TTTCTGTTAAAATATACTCT+TGG | - | chr4_3:26382087-26382106 | Msa0636350:intron | 20.0% |
| !! | TGGAAGTAAATATACAAAAT+AGG | - | chr4_3:26382274-26382293 | Msa0636350:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr4_3:26382509-26382528 | None:intergenic | 20.0% |
| !!! | TAGTTTTAAAAGTAACACTT+TGG | + | chr4_3:26382572-26382591 | None:intergenic | 20.0% |
| !! | AAAACTAACCAAAGTAAATA+AGG | - | chr4_3:26382585-26382604 | Msa0636350:CDS | 20.0% |
| !!! | CAAATTATCCTTATTTACTT+TGG | + | chr4_3:26382596-26382615 | None:intergenic | 20.0% |
| !! | CAAAGTAAATAAGGATAATT+TGG | - | chr4_3:26382594-26382613 | Msa0636350:CDS | 20.0% |
| !!! | TTGATATTTTTGCTTCTTTT+TGG | - | chr4_3:26382928-26382947 | Msa0636350:intron | 20.0% |
| !! | CAATACCAAATATTATTATG+AGG | - | chr4_3:26382957-26382976 | Msa0636350:intron | 20.0% |
| !!! | ATTTTAAGATATCCTTCAAT+TGG | - | chr4_3:26383342-26383361 | Msa0636350:intron | 20.0% |
| !!! | TTTTAAGATATCCTTCAATT+GGG | - | chr4_3:26383343-26383362 | Msa0636350:intron | 20.0% |
| !!! | ATATAAATATTTCCTTTTGC+AGG | - | chr4_3:26383427-26383446 | Msa0636350:CDS | 20.0% |
| !! | TATCAATTGAATTCAACAAA+AGG | - | chr4_3:26383831-26383850 | Msa0636350:intron | 20.0% |
| !!! | ATCTAATAGTGGATTTTTAT+CGG | - | chr4_3:26384494-26384513 | Msa0636350:intron | 20.0% |
| !! | AAATTATTACAAGGATTTAC+AGG | + | chr4_3:26384558-26384577 | None:intergenic | 20.0% |
| !! | TTATTGTGTAAACTTGTAAA+GGG | - | chr4_3:26384686-26384705 | Msa0636350:CDS | 20.0% |
| !!! | ATATAATCTTCATTTTTCTC+AGG | - | chr4_3:26384758-26384777 | Msa0636350:intron | 20.0% |
| !! | ATTGCATATAATATCGTAAA+TGG | - | chr4_3:26385138-26385157 | Msa0636350:intron | 20.0% |
| !!! | AGTCATTAAGTTTTCATTTA+TGG | + | chr4_3:26385255-26385274 | None:intergenic | 20.0% |
| !! | AATATTACAGAAAGAGAAAT+CGG | + | chr4_3:26385425-26385444 | None:intergenic | 20.0% |
| !!! | TTTCTGTAATATTTTGTTGA+AGG | - | chr4_3:26385432-26385451 | Msa0636350:intron | 20.0% |
| !! | AATGATAGAGACAATTAAAA+AGG | - | chr4_3:26385518-26385537 | Msa0636350:CDS | 20.0% |
| !!! | CAATTTTTGACATAAAGAAT+AGG | - | chr4_3:26385637-26385656 | Msa0636350:CDS | 20.0% |
| !! | AAATCTATTGAAAAACCAAA+GGG | + | chr4_3:26385721-26385740 | None:intergenic | 20.0% |
| !! | AAAATCTATTGAAAAACCAA+AGG | + | chr4_3:26385722-26385741 | None:intergenic | 20.0% |
| !!! | TTTGGTTTTTCAATAGATTT+TGG | - | chr4_3:26385721-26385740 | Msa0636350:five_prime_UTR | 20.0% |
| ! | TTGAGATATATACACTCATT+TGG | - | chr4_3:26381683-26381702 | Msa0636350:CDS | 25.0% |
| ! | TGAGATATATACACTCATTT+GGG | - | chr4_3:26381684-26381703 | Msa0636350:CDS | 25.0% |
| !!! | AACAAGTATTTTTGTTAGGA+AGG | - | chr4_3:26381822-26381841 | Msa0636350:intron | 25.0% |
| ! | AAATAGAAAAATACCTGTTG+AGG | + | chr4_3:26381913-26381932 | None:intergenic | 25.0% |
| !!! | CGTTGCAATTTTTTATACTA+CGG | - | chr4_3:26382188-26382207 | Msa0636350:CDS | 25.0% |
| ! | AACTTATGATGATACATGTT+TGG | - | chr4_3:26382343-26382362 | Msa0636350:intron | 25.0% |
| ! | AATGATTAAGAGAAAGAGAA+TGG | + | chr4_3:26382628-26382647 | None:intergenic | 25.0% |
| ! | AAATATCAAAACTTTGCATC+TGG | + | chr4_3:26382917-26382936 | None:intergenic | 25.0% |
| ! | ACCAAATATTATTATGAGGT+TGG | - | chr4_3:26382961-26382980 | Msa0636350:intron | 25.0% |
| ! | TCCAACCTCATAATAATATT+TGG | + | chr4_3:26382965-26382984 | None:intergenic | 25.0% |
| ! | ACAAATCACAACTAATCATT+TGG | - | chr4_3:26383516-26383535 | Msa0636350:CDS | 25.0% |
| ! | GTTCATTCATTACCAAAATT+TGG | + | chr4_3:26384090-26384109 | None:intergenic | 25.0% |
| ! | GAATGAACTAATGATTAACA+TGG | - | chr4_3:26384102-26384121 | Msa0636350:intron | 25.0% |
| !! | CTTTTGATAGAATACCAAAA+GGG | + | chr4_3:26384218-26384237 | None:intergenic | 25.0% |
| !! | TCTTTTGATAGAATACCAAA+AGG | + | chr4_3:26384219-26384238 | None:intergenic | 25.0% |
| ! | TGCAAATAAAATTGATCCAT+TGG | + | chr4_3:26384359-26384378 | None:intergenic | 25.0% |
| !! | TGTTTTACAATAACAGTTTG+TGG | + | chr4_3:26384397-26384416 | None:intergenic | 25.0% |
| ! | TAAAAATTTAACATGCCTTC+AGG | - | chr4_3:26384608-26384627 | Msa0636350:CDS | 25.0% |
| ! | CTTATTGTGTAAACTTGTAA+AGG | - | chr4_3:26384685-26384704 | Msa0636350:CDS | 25.0% |
| !!! | ATTTTTGAGTTGTCGTTTTA+AGG | - | chr4_3:26385297-26385316 | Msa0636350:intron | 25.0% |
| AGTGTGGAATATTCAGATAA+GGG | + | chr4_3:26381583-26381602 | None:intergenic | 30.0% | |
| TAGTGTGGAATATTCAGATA+AGG | + | chr4_3:26381584-26381603 | None:intergenic | 30.0% | |
| !!! | ACTAGGTTTGGTTTTGAATT+TGG | - | chr4_3:26381777-26381796 | Msa0636350:CDS | 30.0% |
| !! | AATTTGGTGTTTGTGTGTAA+TGG | - | chr4_3:26381793-26381812 | Msa0636350:CDS | 30.0% |
| !! | GCACAACAAGTATTTTTGTT+AGG | - | chr4_3:26381818-26381837 | Msa0636350:intron | 30.0% |
| TTAAAAACATCGCTATCAAG+TGG | + | chr4_3:26381868-26381887 | None:intergenic | 30.0% | |
| !!! | ACTTGATAGCGATGTTTTTA+AGG | - | chr4_3:26381867-26381886 | Msa0636350:intron | 30.0% |
| ! | TCGAATTTTGAATTGAACCA+TGG | - | chr4_3:26381934-26381953 | Msa0636350:intron | 30.0% |
| GAAAATTGCAGTTAAAATGC+AGG | - | chr4_3:26382012-26382031 | Msa0636350:intron | 30.0% | |
| TTAAAATGCAGGTTTAATCG+TGG | - | chr4_3:26382023-26382042 | Msa0636350:intron | 30.0% | |
| ATCACAATGCAACAAAGATT+AGG | + | chr4_3:26382300-26382319 | None:intergenic | 30.0% | |
| !! | AAGCGACAATCATTTTGAAA+CGG | + | chr4_3:26382443-26382462 | None:intergenic | 30.0% |
| CATTGCATTTCTTAATACCA+AGG | - | chr4_3:26382644-26382663 | Msa0636350:intron | 30.0% | |
| AGATACTTCAATTACTCATC+TGG | - | chr4_3:26382810-26382829 | Msa0636350:intron | 30.0% | |
| TTATTCATCATGCCACTATA+AGG | - | chr4_3:26382835-26382854 | Msa0636350:intron | 30.0% | |
| TACCTTCAAATTCCTTATAG+TGG | + | chr4_3:26382850-26382869 | None:intergenic | 30.0% | |
| AGAAACAACATACATGACAA+GGG | + | chr4_3:26382891-26382910 | None:intergenic | 30.0% | |
| ACCACAATGATATCTCATAA+AGG | + | chr4_3:26383099-26383118 | None:intergenic | 30.0% | |
| TTCAGTGCAATTATATGTGT+CGG | - | chr4_3:26383234-26383253 | Msa0636350:CDS | 30.0% | |
| CTTTCAGTTCTCTTACAAAT+TGG | - | chr4_3:26383315-26383334 | Msa0636350:intron | 30.0% | |
| ACTATTCAGTCTTTACAACA+TGG | - | chr4_3:26383685-26383704 | Msa0636350:intron | 30.0% | |
| TATTGGAAGCTTACAATTTC+TGG | + | chr4_3:26384011-26384030 | None:intergenic | 30.0% | |
| AGAATGAAAAGTTTCTCGAA+TGG | + | chr4_3:26384058-26384077 | None:intergenic | 30.0% | |
| ! | TCTTTTCCAAGTCCAAATTT+TGG | - | chr4_3:26384075-26384094 | Msa0636350:intron | 30.0% |
| TCATTACCAAAATTTGGACT+TGG | + | chr4_3:26384084-26384103 | None:intergenic | 30.0% | |
| ! | CTTTATAAGGAGTATGGTAT+CGG | + | chr4_3:26384178-26384197 | None:intergenic | 30.0% |
| GTACTTTGTGATGCTTTATA+AGG | + | chr4_3:26384191-26384210 | None:intergenic | 30.0% | |
| AATACCATATGCTGAATAAG+AGG | + | chr4_3:26384267-26384286 | None:intergenic | 30.0% | |
| TAGAAATTAGTACTGTGACA+TGG | + | chr4_3:26384457-26384476 | None:intergenic | 30.0% | |
| AGGGACGTAAAATTATTACA+AGG | + | chr4_3:26384567-26384586 | None:intergenic | 30.0% | |
| AATATACACCACAATATGTG+TGG | - | chr4_3:26384783-26384802 | Msa0636350:intron | 30.0% | |
| !!! | GTTTTTTTCCTGTTAACTCT+CGG | + | chr4_3:26384824-26384843 | None:intergenic | 30.0% |
| TTAACAGGAAAAAAACTCCT+TGG | - | chr4_3:26384828-26384847 | Msa0636350:intron | 30.0% | |
| ATCTCCGATGTTTATGTATA+CGG | + | chr4_3:26385196-26385215 | None:intergenic | 30.0% | |
| TTTCATTTATGGAGCTTACT+CGG | + | chr4_3:26385244-26385263 | None:intergenic | 30.0% | |
| ATGAACATGATTTGAATTGC+AGG | - | chr4_3:26385559-26385578 | Msa0636350:CDS | 30.0% | |
| !!! | TTTCAATAGATTTTGGAACC+CGG | - | chr4_3:26385728-26385747 | Msa0636350:five_prime_UTR | 30.0% |
| CACATTGAGTATTCTTCAAT+GGG | + | chr4_3:26385778-26385797 | None:intergenic | 30.0% | |
| TCACATTGAGTATTCTTCAA+TGG | + | chr4_3:26385779-26385798 | None:intergenic | 30.0% | |
| GTGTGGAATATTCAGATAAG+GGG | + | chr4_3:26381582-26381601 | None:intergenic | 35.0% | |
| AATGGAATTGGCATATAGTG+TGG | + | chr4_3:26381599-26381618 | None:intergenic | 35.0% | |
| TTGAATTGAACCATGGAAGA+AGG | - | chr4_3:26381941-26381960 | Msa0636350:intron | 35.0% | |
| TGAATTGAACCATGGAAGAA+GGG | - | chr4_3:26381942-26381961 | Msa0636350:intron | 35.0% | |
| CATATATATCCCTTCTTCCA+TGG | + | chr4_3:26381954-26381973 | None:intergenic | 35.0% | |
| ! | GATGATACATGTTTGGTCTT+TGG | - | chr4_3:26382350-26382369 | Msa0636350:intron | 35.0% |
| AATTCCACAACAATGCATGT+AGG | + | chr4_3:26382384-26382403 | None:intergenic | 35.0% | |
| !!! | GACAATCATTTTGAAACGGA+GGG | + | chr4_3:26382439-26382458 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr4_3:26382543-26382562 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr4_3:26382547-26382566 | None:intergenic | 35.0% |
| ACCAAGGTTCATATAACACA+AGG | - | chr4_3:26382660-26382679 | Msa0636350:intron | 35.0% | |
| ACCTTGTGTTATATGAACCT+TGG | + | chr4_3:26382664-26382683 | None:intergenic | 35.0% | |
| TATAACACAAGGTGATCATG+TGG | - | chr4_3:26382671-26382690 | Msa0636350:intron | 35.0% | |
| ATAACACAAGGTGATCATGT+GGG | - | chr4_3:26382672-26382691 | Msa0636350:intron | 35.0% | |
| TGCCACTATAAGGAATTTGA+AGG | - | chr4_3:26382845-26382864 | Msa0636350:intron | 35.0% | |
| GAGAAACAACATACATGACA+AGG | + | chr4_3:26382892-26382911 | None:intergenic | 35.0% | |
| TTGGACTTAAGAACACAACA+AGG | - | chr4_3:26382980-26382999 | Msa0636350:intron | 35.0% | |
| AGGTAAAGTGTGATCTTTCA+TGG | - | chr4_3:26383065-26383084 | Msa0636350:intron | 35.0% | |
| GCCTTTATGAGATATCATTG+TGG | - | chr4_3:26383095-26383114 | Msa0636350:intron | 35.0% | |
| TTGTAAGAGAACTGAAAGCA+CGG | + | chr4_3:26383313-26383332 | None:intergenic | 35.0% | |
| TAAGATATCCTTCAATTGGG+TGG | - | chr4_3:26383346-26383365 | Msa0636350:intron | 35.0% | |
| TCTCATATGCCAAGATACAT+AGG | + | chr4_3:26383381-26383400 | None:intergenic | 35.0% | |
| AGAAAGATATGTCCTGCAAA+AGG | + | chr4_3:26383442-26383461 | None:intergenic | 35.0% | |
| !! | GTCAGACTTTTGATTCAAAC+AGG | - | chr4_3:26383796-26383815 | Msa0636350:intron | 35.0% |
| !!! | GGACAAACAGTTTTGTTTGT+TGG | - | chr4_3:26383852-26383871 | Msa0636350:intron | 35.0% |
| TTGCTTATCAACCTTGGATA+TGG | - | chr4_3:26383955-26383974 | Msa0636350:intron | 35.0% | |
| ! | ATGGATTGACGATTATTTGC+AGG | - | chr4_3:26384121-26384140 | Msa0636350:intron | 35.0% |
| TGGATTGACGATTATTTGCA+GGG | - | chr4_3:26384122-26384141 | Msa0636350:intron | 35.0% | |
| GTGATGCTTTATAAGGAGTA+TGG | + | chr4_3:26384184-26384203 | None:intergenic | 35.0% | |
| ACCATAAATACATGCATACG+TGG | - | chr4_3:26384305-26384324 | Msa0636350:intron | 35.0% | |
| TCCACGTATGCATGTATTTA+TGG | + | chr4_3:26384309-26384328 | None:intergenic | 35.0% | |
| ! | GCTGATTCTATGATTTCCAA+TGG | - | chr4_3:26384340-26384359 | Msa0636350:CDS | 35.0% |
| CACTATTAGATGTTAGTGCA+AGG | + | chr4_3:26384485-26384504 | None:intergenic | 35.0% | |
| CTTGCACTAACATCTAATAG+TGG | - | chr4_3:26384483-26384502 | Msa0636350:intron | 35.0% | |
| AATTTGACCTTGTAACCTGA+AGG | + | chr4_3:26384626-26384645 | None:intergenic | 35.0% | |
| ! | TAGCTGTTGCTATTATACCA+AGG | + | chr4_3:26384875-26384894 | None:intergenic | 35.0% |
| TAGCAACAGCTATCATTACA+TGG | - | chr4_3:26384883-26384902 | Msa0636350:intron | 35.0% | |
| AACAGCTATCATTACATGGA+AGG | - | chr4_3:26384887-26384906 | Msa0636350:intron | 35.0% | |
| ACAGCTATCATTACATGGAA+GGG | - | chr4_3:26384888-26384907 | Msa0636350:intron | 35.0% | |
| TGAGAGTAATGTTTGAGTCA+TGG | - | chr4_3:26384918-26384937 | Msa0636350:intron | 35.0% | |
| !! | AAAGTTGATGTTGTGTTTGC+TGG | - | chr4_3:26384953-26384972 | Msa0636350:intron | 35.0% |
| AGTACTTACAGATCTTTCGT+AGG | + | chr4_3:26384990-26385009 | None:intergenic | 35.0% | |
| TCACATGAATCAGTACTCTT+TGG | + | chr4_3:26385080-26385099 | None:intergenic | 35.0% | |
| AAGCGATATATGTTTGTGTC+AGG | - | chr4_3:26385101-26385120 | Msa0636350:intron | 35.0% | |
| TCTCCGATGTTTATGTATAC+GGG | + | chr4_3:26385195-26385214 | None:intergenic | 35.0% | |
| GTATACATAAACATCGGAGA+TGG | - | chr4_3:26385195-26385214 | Msa0636350:intron | 35.0% | |
| ATTACAGAAAGAGAAATCGG+TGG | + | chr4_3:26385422-26385441 | None:intergenic | 35.0% | |
| AAAAATTGCATGTCCAAAGC+TGG | + | chr4_3:26385625-26385644 | None:intergenic | 35.0% | |
| ! | TTGGTGTTTGTGTGTAATGG+AGG | - | chr4_3:26381796-26381815 | Msa0636350:CDS | 40.0% |
| !!! | GATGTTTTTAAGGTTCCTCC+TGG | - | chr4_3:26381877-26381896 | Msa0636350:intron | 40.0% |
| !! | TGTTGAGGAGCATTATAACC+AGG | + | chr4_3:26381898-26381917 | None:intergenic | 40.0% |
| TGGTTATAATGCTCCTCAAC+AGG | - | chr4_3:26381897-26381916 | Msa0636350:intron | 40.0% | |
| CATTCCTACATGCATTGTTG+TGG | - | chr4_3:26382377-26382396 | Msa0636350:intron | 40.0% | |
| AGGGAGTAAAACTTACAGCA+AGG | + | chr4_3:26382420-26382439 | None:intergenic | 40.0% | |
| !!! | CGACAATCATTTTGAAACGG+AGG | + | chr4_3:26382440-26382459 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr4_3:26382544-26382563 | None:intergenic | 40.0% |
| TAACACAAGGTGATCATGTG+GGG | - | chr4_3:26382673-26382692 | Msa0636350:intron | 40.0% | |
| AAGCACAAGAAGCTAGCTAA+AGG | - | chr4_3:26382771-26382790 | Msa0636350:intron | 40.0% | |
| AGCACAAGAAGCTAGCTAAA+GGG | - | chr4_3:26382772-26382791 | Msa0636350:intron | 40.0% | |
| CATACATGACAAGGGAGTAA+TGG | + | chr4_3:26382883-26382902 | None:intergenic | 40.0% | |
| ! | AGAACACAACAAGGCAGTTT+TGG | - | chr4_3:26382989-26383008 | Msa0636350:intron | 40.0% |
| TTTACAACTCCTCCTGCAAT+TGG | - | chr4_3:26383012-26383031 | Msa0636350:intron | 40.0% | |
| CCTATGAGACCAAATGTGTA+TGG | + | chr4_3:26383048-26383067 | None:intergenic | 40.0% | |
| CCATACACATTTGGTCTCAT+AGG | - | chr4_3:26383045-26383064 | Msa0636350:intron | 40.0% | |
| ATATCCTTCAATTGGGTGGA+TGG | - | chr4_3:26383350-26383369 | Msa0636350:intron | 40.0% | |
| ATGGAGTCTCCTATGTATCT+TGG | - | chr4_3:26383369-26383388 | Msa0636350:intron | 40.0% | |
| ATCTGACGACTTTGACTGAT+TGG | - | chr4_3:26383582-26383601 | Msa0636350:CDS | 40.0% | |
| AAGGATGCTACATCAGTTAG+TGG | + | chr4_3:26383762-26383781 | None:intergenic | 40.0% | |
| ! | ACTGATGTAGCATCCTTTTC+AGG | - | chr4_3:26383765-26383784 | Msa0636350:intron | 40.0% |
| ACCCGAATCATGACAATGTT+CGG | - | chr4_3:26383898-26383917 | Msa0636350:intron | 40.0% | |
| ACCGAACATTGTCATGATTC+GGG | + | chr4_3:26383902-26383921 | None:intergenic | 40.0% | |
| CACCGAACATTGTCATGATT+CGG | + | chr4_3:26383903-26383922 | None:intergenic | 40.0% | |
| GAATCATGACAATGTTCGGT+GGG | - | chr4_3:26383902-26383921 | Msa0636350:intron | 40.0% | |
| TTTCCAACAGTCCATATCCA+AGG | + | chr4_3:26383969-26383988 | None:intergenic | 40.0% | |
| CTGGAGCAAAATCAAGTTCA+TGG | + | chr4_3:26383992-26384011 | None:intergenic | 40.0% | |
| !! | CACAAAGTACTTCACCCTTT+TGG | - | chr4_3:26384201-26384220 | Msa0636350:intron | 40.0% |
| TTCAGCACACATCATTGTCT+TGG | - | chr4_3:26384241-26384260 | Msa0636350:intron | 40.0% | |
| TTGGCCTCTTATTCAGCATA+TGG | - | chr4_3:26384260-26384279 | Msa0636350:intron | 40.0% | |
| AGTACTGTGACATGGAAACA+TGG | + | chr4_3:26384449-26384468 | None:intergenic | 40.0% | |
| ! | TAACATGCCTTCAGGTTACA+AGG | - | chr4_3:26384616-26384635 | Msa0636350:CDS | 40.0% |
| TGTTCAAGCCACACATATTG+TGG | + | chr4_3:26384794-26384813 | None:intergenic | 40.0% | |
| TGCATGAGAACAATCAACCA+AGG | + | chr4_3:26384848-26384867 | None:intergenic | 40.0% | |
| TTGTTCTCATGCATTCACCT+TGG | - | chr4_3:26384855-26384874 | Msa0636350:intron | 40.0% | |
| CAGCTATCATTACATGGAAG+GGG | - | chr4_3:26384889-26384908 | Msa0636350:intron | 40.0% | |
| ATCTTTCGTAGGCATGTACA+TGG | + | chr4_3:26384979-26384998 | None:intergenic | 40.0% | |
| ! | GGAGCTGATAGATCTTTTAC+GGG | + | chr4_3:26385174-26385193 | None:intergenic | 40.0% |
| ! | GGGAGCTGATAGATCTTTTA+CGG | + | chr4_3:26385175-26385194 | None:intergenic | 40.0% |
| GCTCCCGTATACATAAACAT+CGG | - | chr4_3:26385189-26385208 | Msa0636350:intron | 40.0% | |
| TACATAAACATCGGAGATGG+AGG | - | chr4_3:26385198-26385217 | Msa0636350:intron | 40.0% | |
| ACATAAACATCGGAGATGGA+GGG | - | chr4_3:26385199-26385218 | Msa0636350:intron | 40.0% | |
| TCTCTAAATGCTGAGTACTC+TGG | + | chr4_3:26385600-26385619 | None:intergenic | 40.0% | |
| AGCTGGCATAGAAATCAAGA+TGG | - | chr4_3:26385675-26385694 | Msa0636350:five_prime_UTR | 40.0% | |
| CTGTTAAGAGTGATTCCCTT+TGG | - | chr4_3:26385703-26385722 | Msa0636350:five_prime_UTR | 40.0% | |
| ! | TGAGGTTTGGAATCATCAAC+CGG | + | chr4_3:26385750-26385769 | None:intergenic | 40.0% |
| !! | GTTGATGATTCCAAACCTCA+TGG | - | chr4_3:26385750-26385769 | Msa0636350:five_prime_UTR | 40.0% |
| ATTCTTCAATGGGAACCATG+AGG | + | chr4_3:26385768-26385787 | None:intergenic | 40.0% | |
| !! | TGAGGAGCATTATAACCAGG+AGG | + | chr4_3:26381895-26381914 | None:intergenic | 45.0% |
| CTGCGATGAAAATACACTCG+TGG | - | chr4_3:26382150-26382169 | Msa0636350:intron | 45.0% | |
| GAAAGCAGTGATCGTATCGT+GGG | - | chr4_3:26382695-26382714 | Msa0636350:intron | 45.0% | |
| CCAAATGTGTATGGCACATC+AGG | + | chr4_3:26383039-26383058 | None:intergenic | 45.0% | |
| CCTGATGTGCCATACACATT+TGG | - | chr4_3:26383036-26383055 | Msa0636350:intron | 45.0% | |
| GTTCCAGTGAAGCACAGATA+CGG | - | chr4_3:26383141-26383160 | Msa0636350:CDS | 45.0% | |
| TTTCCGTATCTGTGCTTCAC+TGG | + | chr4_3:26383147-26383166 | None:intergenic | 45.0% | |
| GTGAAGCACAGATACGGAAA+AGG | - | chr4_3:26383147-26383166 | Msa0636350:CDS | 45.0% | |
| !! | TATATGTGTCGGTGTCGTGT+TGG | - | chr4_3:26383245-26383264 | Msa0636350:intron | 45.0% |
| !!! | GCATCCTTTTCAGGTGATCT+TGG | - | chr4_3:26383774-26383793 | Msa0636350:intron | 45.0% |
| CTGACCAAGATCACCTGAAA+AGG | + | chr4_3:26383781-26383800 | None:intergenic | 45.0% | |
| CGAATCATGACAATGTTCGG+TGG | - | chr4_3:26383901-26383920 | Msa0636350:intron | 45.0% | |
| ! | ACAATGTTCGGTGGGATACT+TGG | - | chr4_3:26383910-26383929 | Msa0636350:intron | 45.0% |
| ! | CAATGTTCGGTGGGATACTT+GGG | - | chr4_3:26383911-26383930 | Msa0636350:intron | 45.0% |
| ! | AATGTTCGGTGGGATACTTG+GGG | - | chr4_3:26383912-26383931 | Msa0636350:intron | 45.0% |
| !! | GGAGTGTTGCTTATCAACCT+TGG | - | chr4_3:26383949-26383968 | Msa0636350:intron | 45.0% |
| ! | CAACCTTGGATATGGACTGT+TGG | - | chr4_3:26383963-26383982 | Msa0636350:intron | 45.0% |
| !! | GTATGGTATCGGTGCGAAAA+AGG | + | chr4_3:26384167-26384186 | None:intergenic | 45.0% |
| AGAGAGATCATTTGTCCACG+TGG | + | chr4_3:26384667-26384686 | None:intergenic | 45.0% | |
| AAGAGCTACCGAGAGTTAAC+AGG | - | chr4_3:26384813-26384832 | Msa0636350:intron | 45.0% | |
| GCATTTAGAGAAGCCAGCTT+TGG | - | chr4_3:26385609-26385628 | Msa0636350:CDS | 45.0% | |
| GGACACATGCTTACTATAGC+TGG | - | chr4_3:26385658-26385677 | Msa0636350:exon | 45.0% | |
| ! | GAGGTTTGGAATCATCAACC+GGG | + | chr4_3:26385749-26385768 | None:intergenic | 45.0% |
| TCAATGGGAACCATGAGGTT+TGG | + | chr4_3:26385763-26385782 | None:intergenic | 45.0% | |
| !! | TTATTGAATATTTATATTAT+TGG | + | chr4_3:26383408-26383427 | None:intergenic | 5.0% |
| GGAAAGCAGTGATCGTATCG+TGG | - | chr4_3:26382694-26382713 | Msa0636350:intron | 50.0% | |
| ACATCAGGACCAATTGCAGG+AGG | + | chr4_3:26383024-26383043 | None:intergenic | 50.0% | |
| TCAGTGTCTAGTGTCGTGTC+TGG | + | chr4_3:26383176-26383195 | None:intergenic | 50.0% | |
| !! | CGACACTAGACACTGACTTG+CGG | - | chr4_3:26383180-26383199 | Msa0636350:CDS | 50.0% |
| ! | TCCTCGGATTAGACGTGTCT+CGG | + | chr4_3:26383286-26383305 | None:intergenic | 50.0% |
| GACTCCATCCACCCAATTGA+AGG | + | chr4_3:26383357-26383376 | None:intergenic | 50.0% | |
| CGGTGCGAAAAAGGCTTGAA+TGG | + | chr4_3:26384158-26384177 | None:intergenic | 50.0% | |
| ACCTCTATGCTAACACCACG+TGG | - | chr4_3:26384649-26384668 | Msa0636350:CDS | 50.0% | |
| ! | TCCACGTGGTGTTAGCATAG+AGG | + | chr4_3:26384653-26384672 | None:intergenic | 50.0% |
| GGAGATGGAGGGAATATCGA+AGG | - | chr4_3:26385210-26385229 | Msa0636350:intron | 50.0% | |
| AATGCTGAGTACTCTGGCTG+TGG | + | chr4_3:26385594-26385613 | None:intergenic | 50.0% | |
| GATCGTATCGTGGGTGACAG+AGG | - | chr4_3:26382704-26382723 | Msa0636350:intron | 55.0% | |
| TGGGTGACAGAGGATGAACC+AGG | - | chr4_3:26382714-26382733 | Msa0636350:intron | 55.0% | |
| GGGTGACAGAGGATGAACCA+GGG | - | chr4_3:26382715-26382734 | Msa0636350:intron | 55.0% | |
| GACAGAGGATGAACCAGGGT+CGG | - | chr4_3:26382719-26382738 | Msa0636350:intron | 55.0% | |
| GGCACATCAGGACCAATTGC+AGG | + | chr4_3:26383027-26383046 | None:intergenic | 55.0% | |
| !! | TGTCGGTGTCGTGTTGGTGT+CGG | - | chr4_3:26383251-26383270 | Msa0636350:intron | 55.0% |
| ACCGAGACACGTCTAATCCG+AGG | - | chr4_3:26383282-26383301 | Msa0636350:intron | 55.0% | |
| ! | CTGAAAGCACGGACACTCCT+CGG | + | chr4_3:26383302-26383321 | None:intergenic | 55.0% |
| TTCGGTGGGATACTTGGGGA+AGG | - | chr4_3:26383916-26383935 | Msa0636350:intron | 55.0% | |
| CTTGGGGAAGGTTTGCAGAG+AGG | - | chr4_3:26383928-26383947 | Msa0636350:intron | 55.0% | |
| TAACGCACTGCATCCGACCC+TGG | + | chr4_3:26382735-26382754 | None:intergenic | 60.0% | |
| GGTCGGATGCAGTGCGTTAC+TGG | - | chr4_3:26382736-26382755 | Msa0636350:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 26381574 | 26385831 | 26381574 | ID=Msa0636350;Name=Msa0636350 |
| chr4_3 | mRNA | 26381574 | 26385831 | 26381574 | ID=Msa0636350-mRNA-1;Parent=Msa0636350;Name=Msa0636350-mRNA-1;_AED=0.09;_eAED=0.09;_QI=159|1|1|1|1|1|8|49|470 |
| chr4_3 | exon | 26381574 | 26381824 | 26381574 | ID=Msa0636350-mRNA-1:exon:6664;Parent=Msa0636350-mRNA-1 |
| chr4_3 | exon | 26382161 | 26382282 | 26382161 | ID=Msa0636350-mRNA-1:exon:6663;Parent=Msa0636350-mRNA-1 |
| chr4_3 | exon | 26382405 | 26382625 | 26382405 | ID=Msa0636350-mRNA-1:exon:6662;Parent=Msa0636350-mRNA-1 |
| chr4_3 | exon | 26383124 | 26383262 | 26383124 | ID=Msa0636350-mRNA-1:exon:6661;Parent=Msa0636350-mRNA-1 |
| chr4_3 | exon | 26383389 | 26383618 | 26383389 | ID=Msa0636350-mRNA-1:exon:6660;Parent=Msa0636350-mRNA-1 |
| chr4_3 | exon | 26384339 | 26384450 | 26384339 | ID=Msa0636350-mRNA-1:exon:6659;Parent=Msa0636350-mRNA-1 |
| chr4_3 | exon | 26384539 | 26384739 | 26384539 | ID=Msa0636350-mRNA-1:exon:6658;Parent=Msa0636350-mRNA-1 |
| chr4_3 | exon | 26385487 | 26385831 | 26385487 | ID=Msa0636350-mRNA-1:exon:6657;Parent=Msa0636350-mRNA-1 |
| chr4_3 | five_prime_UTR | 26385673 | 26385831 | 26385673 | ID=Msa0636350-mRNA-1:five_prime_utr;Parent=Msa0636350-mRNA-1 |
| chr4_3 | CDS | 26385487 | 26385672 | 26385487 | ID=Msa0636350-mRNA-1:cds;Parent=Msa0636350-mRNA-1 |
| chr4_3 | CDS | 26384539 | 26384739 | 26384539 | ID=Msa0636350-mRNA-1:cds;Parent=Msa0636350-mRNA-1 |
| chr4_3 | CDS | 26384339 | 26384450 | 26384339 | ID=Msa0636350-mRNA-1:cds;Parent=Msa0636350-mRNA-1 |
| chr4_3 | CDS | 26383389 | 26383618 | 26383389 | ID=Msa0636350-mRNA-1:cds;Parent=Msa0636350-mRNA-1 |
| chr4_3 | CDS | 26383124 | 26383262 | 26383124 | ID=Msa0636350-mRNA-1:cds;Parent=Msa0636350-mRNA-1 |
| chr4_3 | CDS | 26382405 | 26382625 | 26382405 | ID=Msa0636350-mRNA-1:cds;Parent=Msa0636350-mRNA-1 |
| chr4_3 | CDS | 26382161 | 26382282 | 26382161 | ID=Msa0636350-mRNA-1:cds;Parent=Msa0636350-mRNA-1 |
| chr4_3 | CDS | 26381623 | 26381824 | 26381623 | ID=Msa0636350-mRNA-1:cds;Parent=Msa0636350-mRNA-1 |
| chr4_3 | three_prime_UTR | 26381574 | 26381622 | 26381574 | ID=Msa0636350-mRNA-1:three_prime_utr;Parent=Msa0636350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
