AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0638980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638980 MtrunA17_Chr4g0050371 96.192 604 23 0 1 604 1 604 0.0 1210
Msa0638980 MtrunA17_Chr8g0393041 51.586 599 283 3 5 602 1 593 0.0 554
Msa0638980 MtrunA17_Chr1g0191741 47.281 423 215 3 48 467 6 423 6.05e-127 380
Msa0638980 MtrunA17_Chr2g0279961 40.000 150 89 1 72 221 195 343 2.34e-23 104
Msa0638980 MtrunA17_Chr3g0097231 42.373 118 68 0 484 601 7 124 6.43e-18 87.0
Msa0638980 MtrunA17_Chr1g0192811 45.000 100 54 1 492 591 95 193 9.17e-18 86.3
Msa0638980 MtrunA17_Chr8g0384851 40.000 150 89 1 72 221 202 350 1.72e-14 76.6
Msa0638980 MtrunA17_Chr8g0385461 30.464 151 98 3 73 222 226 370 1.51e-13 73.6
Msa0638980 MtrunA17_Chr3g0130801 37.333 150 92 1 72 221 266 413 2.14e-13 73.2
Msa0638980 MtrunA17_Chr3g0097801 40.625 128 76 0 119 246 151 278 3.68e-13 72.4
Msa0638980 MtrunA17_Chr5g0398901 36.000 100 64 0 492 591 396 495 5.93e-12 68.6
Msa0638980 MtrunA17_Chr2g0323971 31.667 120 75 1 492 604 102 221 6.40e-12 66.6
Msa0638980 MtrunA17_Chr1g0160051 34.848 132 76 3 460 590 162 284 8.39e-12 67.8
Msa0638980 MtrunA17_Chr8g0377651 38.017 121 69 2 107 222 138 257 1.17e-11 67.4
Msa0638980 MtrunA17_Chr1g0166441 33.929 112 74 0 491 602 14 125 1.60e-11 65.9
Msa0638980 MtrunA17_Chr2g0316221 35.632 87 56 0 494 580 468 554 1.90e-11 67.0
Msa0638980 MtrunA17_Chr8g0377641 34.752 141 83 4 107 242 135 271 2.44e-11 66.6
Msa0638980 MtrunA17_Chr8g0377681 34.043 141 84 3 107 242 135 271 3.65e-11 65.9
Msa0638980 MtrunA17_Chr7g0237741 30.000 120 77 1 492 604 99 218 9.11e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638980 AT5G09420.1 63.350 603 217 4 1 601 1 601 0.0 767
Msa0638980 AT3G17970.1 51.858 565 271 1 39 602 24 588 0.0 528
Msa0638980 AT3G17970.2 50.484 517 255 1 39 554 24 540 5.57e-159 467
Msa0638980 AT1G08980.1 46.154 416 216 3 48 458 6 418 4.11e-116 352
Msa0638980 AT5G64440.1 38.824 170 103 1 72 241 196 364 6.69e-23 103
Msa0638980 AT2G42810.2 39.344 122 74 0 480 601 5 126 2.38e-18 89.0
Msa0638980 AT2G42810.3 39.344 122 74 0 480 601 5 126 2.52e-18 89.0
Msa0638980 AT2G42810.1 39.344 122 74 0 480 601 5 126 2.86e-18 88.6
Msa0638980 AT2G42810.5 39.344 122 74 0 480 601 5 126 2.86e-18 88.6
Msa0638980 AT2G42810.4 39.344 122 74 0 480 601 5 126 2.86e-18 88.6
Msa0638980 AT1G56440.1 46.000 100 53 1 492 591 88 186 1.51e-17 86.3
Msa0638980 AT1G56440.2 46.000 100 53 1 492 591 78 176 1.55e-17 86.3
Msa0638980 AT5G07360.1 29.954 217 136 5 73 280 268 477 6.36e-17 85.1
Msa0638980 AT5G07360.3 29.954 217 136 5 73 280 268 477 6.36e-17 85.1
Msa0638980 AT1G04190.1 39.316 117 71 0 486 602 13 129 1.01e-14 76.3
Msa0638980 AT4G08320.1 39.496 119 67 2 488 601 175 293 2.66e-14 75.9
Msa0638980 AT4G08320.2 42.308 104 59 1 488 590 175 278 8.36e-14 74.3
Msa0638980 AT3G25660.1 41.406 128 75 0 119 246 152 279 1.81e-13 73.6
Msa0638980 AT1G62740.1 37.500 120 69 2 479 598 379 492 1.14e-12 71.2
Msa0638980 AT4G12400.1 36.036 111 71 0 488 598 369 479 1.60e-12 70.9
Msa0638980 AT4G12400.2 36.036 111 71 0 488 598 369 479 1.62e-12 70.9
Msa0638980 AT1G12270.1 36.449 107 68 0 492 598 387 493 5.27e-12 69.3
Msa0638980 AT5G07360.2 27.650 217 134 6 73 280 268 470 1.49e-11 67.8
Msa0638980 AT3G58620.2 27.481 131 95 0 474 604 435 565 6.06e-11 65.9
Msa0638980 AT3G58620.1 27.481 131 95 0 474 604 435 565 8.82e-11 65.5

Find 170 sgRNAs with CRISPR-Local

Find 668 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAACCCATTCTTCATAAT+TGG 0.173263 4_3:+34614487 None:intergenic
GTTATGGATGAATTCTCTTT+TGG 0.178620 4_3:-34617831 Msa0638980:CDS
TGCATTTCAAAGTCTGTTAA+AGG 0.191955 4_3:-34614354 Msa0638980:intron
GAAATATTAATATATGATTT+TGG 0.209198 4_3:-34610296 Msa0638980:three_prime_UTR
ATTATCGTATGTAGTATTAA+TGG 0.214628 4_3:+34614415 None:intergenic
AACACTCCTAAACCTGATTT+TGG 0.219199 4_3:-34619172 Msa0638980:CDS
ATATATGGGTGCAAAATTAT+TGG 0.224492 4_3:+34610129 None:intergenic
TTGTGAGTATATTGCTAAAA+AGG 0.228126 4_3:-34616086 Msa0638980:CDS
CTAGGTCAACCTTATATATA+TGG 0.241147 4_3:+34610114 None:intergenic
GTCTCTAAGCTTTGTGCATT+TGG 0.273404 4_3:+34616756 None:intergenic
TCAGAGAAAATGTGTGAAAT+TGG 0.282501 4_3:+34619334 None:intergenic
TTCTTTGCATTAAGCTTTAG+TGG 0.296935 4_3:+34613685 None:intergenic
TCTGGTGAGAACAAGTATTA+TGG 0.298777 4_3:-34617715 Msa0638980:CDS
AATGGCTTCATAAACATGTT+TGG 0.301329 4_3:+34614433 None:intergenic
AAGGGCTATGTGACGGGGTT+TGG 0.313527 4_3:-34617951 Msa0638980:CDS
AGAGTTGAGAAAGAATATTT+AGG 0.315090 4_3:+34619405 None:intergenic
GTGACCGCTCTGCTCTTCAA+TGG 0.315280 4_3:-34617876 Msa0638980:CDS
GAAATATTATTCAACCCTAT+TGG 0.317227 4_3:-34610158 Msa0638980:three_prime_UTR
CAATCGGCACCCCAACAAAA+TGG 0.333193 4_3:-34616040 Msa0638980:CDS
AATTATTGGCAAAATCCAAT+AGG 0.334147 4_3:+34610143 None:intergenic
TCCGACGATTAACCAGAGTT+TGG 0.334376 4_3:+34619255 None:intergenic
AGAAACGAACGTGTCACTTA+TGG 0.335088 4_3:+34619063 None:intergenic
GCAATCACTGAAGCTGATTA+AGG 0.335684 4_3:-34619293 Msa0638980:CDS
TGACCGCTCTGCTCTTCAAT+GGG 0.338248 4_3:-34617875 Msa0638980:CDS
TAAGGCAGTCACTCACTATA+CGG 0.344676 4_3:-34611493 Msa0638980:CDS
TTGTGTTGGCAAGACTGTTA+TGG 0.346517 4_3:-34617847 Msa0638980:CDS
TTCCAGGTTACGATTCCTTT+AGG 0.348668 4_3:-34613488 Msa0638980:intron
ATGGCTTCATAAACATGTTT+GGG 0.355692 4_3:+34614434 None:intergenic
CTCTGGTTAATCGTCGGAAT+TGG 0.363824 4_3:-34619250 Msa0638980:CDS
TCAATAAAAGCACCAAAATC+AGG 0.365289 4_3:+34619160 None:intergenic
AAAGCACCAAAATCAGGTTT+AGG 0.377993 4_3:+34619166 None:intergenic
AGAATCACTACTTCGGTATA+AGG 0.382326 4_3:-34610831 Msa0638980:CDS
TTAAATCCAATTATGAAGAA+TGG 0.384162 4_3:-34614493 Msa0638980:CDS
TTGGAGGGAGGGAGGGAGGG+AGG 0.386138 4_3:+34610344 None:intergenic
TCCAGCATTGCTAGTATGTC+TGG 0.392363 4_3:-34613622 Msa0638980:CDS
ATTTCTTCTAGACACTATCT+TGG 0.392742 4_3:-34613408 Msa0638980:CDS
CCGACGATTAACCAGAGTTT+GGG 0.396429 4_3:+34619256 None:intergenic
ATTATTGGCAAAATCCAATA+GGG 0.403213 4_3:+34610144 None:intergenic
GGTTGAATAATATTTCTAAC+AGG 0.404852 4_3:+34610165 None:intergenic
GGCAATATTGCTTGATAAGA+AGG 0.406807 4_3:-34611282 Msa0638980:intron
CTTTAAAAGTTCAGAAGGTT+CGG 0.418299 4_3:+34613310 None:intergenic
TCACTTGGAGGGAGGGAGGG+AGG 0.419009 4_3:+34610340 None:intergenic
TCGGTATTTCCATTGATGTT+TGG 0.419040 4_3:+34613329 None:intergenic
TTTCCATTGATGTTTGGTAA+TGG 0.420732 4_3:+34613335 None:intergenic
TAAATCCAATTATGAAGAAT+GGG 0.421215 4_3:-34614492 Msa0638980:CDS
GGACTTGTTGATTTCGCCAT+TGG 0.422961 4_3:-34617616 Msa0638980:intron
GGAGGAGGAGGCTGAGGAAA+GGG 0.431169 4_3:+34619121 None:intergenic
GACGTGAAGGGCTATGTGAC+GGG 0.431364 4_3:-34617957 Msa0638980:CDS
TTCAATGGGGCTACTTGTGT+TGG 0.433681 4_3:-34617861 Msa0638980:CDS
CTAAAGCTTAATGCAAAGAA+AGG 0.434040 4_3:-34613682 Msa0638980:CDS
TCACAAAGATCCATATGCTT+TGG 0.436397 4_3:+34616103 None:intergenic
CGGTATAAGGAGGCTCTTGA+AGG 0.436879 4_3:-34610818 Msa0638980:intron
TGCTTGGCGGCAGGAGGAGG+AGG 0.439066 4_3:+34619109 None:intergenic
GCGGCAGGAGGAGGAGGCTG+AGG 0.443794 4_3:+34619115 None:intergenic
TAAAGAAAAGCAATGGGATA+AGG 0.445790 4_3:-34611511 Msa0638980:CDS
CTTCAAGAGCAGGCTAGCTC+TGG 0.449151 4_3:-34613371 Msa0638980:CDS
CACTTGGAGGGAGGGAGGGA+GGG 0.449925 4_3:+34610341 None:intergenic
AGGAGGAGGAGGCTGAGGAA+AGG 0.454392 4_3:+34619120 None:intergenic
AGTTGCTTGGCGGCAGGAGG+AGG 0.455403 4_3:+34619106 None:intergenic
ATTCCATTACCAAACATCAA+TGG 0.455429 4_3:-34613338 Msa0638980:CDS
GATGGCATCTGAGGATTAGT+TGG 0.461796 4_3:+34617688 None:intergenic
TAGTATGTCTGGTTGTTGTC+AGG 0.465310 4_3:-34613611 Msa0638980:intron
TCAGATGCCATCGTGTGTCC+CGG 0.468335 4_3:-34617677 Msa0638980:CDS
TCAAAATACCTTCATTCTGA+AGG 0.471013 4_3:+34610251 None:intergenic
TTGCTCATGAAGCCTTAGAC+TGG 0.473607 4_3:+34616060 None:intergenic
GTTTCATTCATCTCAAACCA+TGG 0.474484 4_3:-34613440 Msa0638980:CDS
AAAGCTATCGAGAATATGTC+TGG 0.475596 4_3:-34616299 Msa0638980:CDS
TAAAAGCCTTGTATAAAGTC+AGG 0.480272 4_3:-34614391 Msa0638980:CDS
TGCTAATCTTGCTGTGCAAA+GGG 0.481993 4_3:-34610399 Msa0638980:CDS
TTCTCCTTTAAAAGTTCAGA+AGG 0.483289 4_3:+34613305 None:intergenic
ACCAGACATACTAGCAATGC+TGG 0.484216 4_3:+34613621 None:intergenic
CTCATGCCTGACTTTATACA+AGG 0.486729 4_3:+34614385 None:intergenic
GAAAGAAGTTGCTTGGCGGC+AGG 0.487428 4_3:+34619100 None:intergenic
CAAAAGACAATATATGTCAT+TGG 0.487661 4_3:-34616323 Msa0638980:CDS
ATAATGCAAAACTTCTATCA+TGG 0.489308 4_3:+34613644 None:intergenic
ATGATTTAAAGAAAATATGA+TGG 0.491303 4_3:+34610062 None:intergenic
TATATTGAAAACCCTCTCTT+CGG 0.493411 4_3:-34616011 Msa0638980:CDS
GATTAACCAGAGTTTGGGAT+TGG 0.495718 4_3:+34619261 None:intergenic
GAAGAGAACGCACGAGGAGG+CGG 0.498920 4_3:-34617916 Msa0638980:CDS
AAAATACCACAAAGTGATGC+TGG 0.501603 4_3:+34616825 None:intergenic
AAGGCAGTCACTCACTATAC+GGG 0.504378 4_3:-34611492 Msa0638980:CDS
CTGCTTGCTTAAAGCTAGGA+TGG 0.504647 4_3:-34611419 Msa0638980:intron
CAGATGCCATCGTGTGTCCC+GGG 0.504741 4_3:-34617676 Msa0638980:CDS
AGAATTCCAGCATCACTTTG+TGG 0.510332 4_3:-34616831 Msa0638980:CDS
AGATCAGGCTCCAAAGCATA+TGG 0.512614 4_3:-34616113 Msa0638980:CDS
TAGGTCAACCTTATATATAT+GGG 0.512626 4_3:+34610115 None:intergenic
TAGTGGACTGTCTGCTACAG+AGG 0.513302 4_3:+34613702 None:intergenic
TAAAATGTACAGAGGCTACT+AGG 0.514363 4_3:+34610096 None:intergenic
GGCATTTAAAGAAAAGCAAT+GGG 0.514464 4_3:-34611517 Msa0638980:CDS
ATTGATGTTTGGTAATGGAA+TGG 0.516512 4_3:+34613340 None:intergenic
TCTAAGGCTTCATGAGCAAT+CGG 0.518298 4_3:-34616056 Msa0638980:CDS
CGGTTATGCTTTCAATACAA+AGG 0.519788 4_3:-34615991 Msa0638980:intron
GTATACAGCTCTTCAAGAGC+AGG 0.523402 4_3:-34613381 Msa0638980:CDS
ATGCTAATCTTGCTGTGCAA+AGG 0.528129 4_3:-34610400 Msa0638980:CDS
CAATCATCATGATATCCTAA+AGG 0.531757 4_3:+34613473 None:intergenic
GAGAGAAGAAAGAAGTTGCT+TGG 0.532175 4_3:+34619093 None:intergenic
TCGGAATTGGACTCGCCGGC+GGG 0.532317 4_3:-34619237 Msa0638980:CDS
AAAATCAATAGCTGTGGATG+TGG 0.535008 4_3:-34610318 Msa0638980:three_prime_UTR
TTGAAAGCATAACCGAAGAG+AGG 0.536256 4_3:+34615999 None:intergenic
GCTTTAAGCAAGCAGCTGCT+CGG 0.536479 4_3:+34611427 None:intergenic
GAACCACTAGAAGACCCTCC+CGG 0.537525 4_3:+34617658 None:intergenic
CGGCATTTAAAGAAAAGCAA+TGG 0.537843 4_3:-34611518 Msa0638980:CDS
TGGAGGGAGGGAGGGAGGGA+GGG 0.538747 4_3:+34610345 None:intergenic
TGTTCTTGAACCACAGAACA+AGG 0.543726 4_3:-34610423 Msa0638980:CDS
CACGGGGCTATATCTACCAT+TGG 0.544481 4_3:-34616786 Msa0638980:CDS
GCGTCTTCTACGGCGAGTCT+CGG 0.545847 4_3:+34619201 None:intergenic
TCGTGCGTTCTCTTCCACAC+AGG 0.546465 4_3:+34617924 None:intergenic
GAAGAAATTTGTCACCTCCA+TGG 0.547752 4_3:+34613423 None:intergenic
TGTTGCGGCAGCGTCTTCTA+CGG 0.549263 4_3:+34619191 None:intergenic
GCAGCTGCTTGCTTAAAGCT+AGG 0.551036 4_3:-34611423 Msa0638980:CDS
GGCGGAGAAGACTGCGATGG+TGG 0.555538 4_3:-34617898 Msa0638980:CDS
TGCCATCGTGTGTCCCGGGA+GGG 0.557956 4_3:-34617672 Msa0638980:CDS
GCACAAAGCTTAGAGACCAT+TGG 0.558013 4_3:-34616750 Msa0638980:intron
TGCTCATGAAGCCTTAGACT+GGG 0.560156 4_3:+34616061 None:intergenic
AACCACTAGAAGACCCTCCC+GGG 0.562270 4_3:+34617659 None:intergenic
AGCGGAAGAAGACTGCAGTA+AGG 0.563929 4_3:-34611303 Msa0638980:CDS
TGACTACACCTTCAGAATGA+AGG 0.566101 4_3:-34610259 Msa0638980:three_prime_UTR
AGAAGTTGCTTGGCGGCAGG+AGG 0.569345 4_3:+34619103 None:intergenic
TCAGCAGTAGCAGTTGCTGC+GGG 0.571901 4_3:-34617637 Msa0638980:CDS
CCCAAACTCTGGTTAATCGT+CGG 0.572628 4_3:-34619256 Msa0638980:CDS
TTTACTTCAATTGAATTCAG+TGG 0.572963 4_3:-34616411 Msa0638980:CDS
TTCAGCAGTAGCAGTTGCTG+CGG 0.578639 4_3:-34617638 Msa0638980:CDS
CTTATGCAGCTTTCAGCTAG+CGG 0.578821 4_3:-34611321 Msa0638980:intron
ATCGTCGGAATTGGACTCGC+CGG 0.579234 4_3:-34619241 Msa0638980:CDS
GGGACACACGATGGCATCTG+AGG 0.580420 4_3:+34617679 None:intergenic
CCAACACGATGTAGGACAGA+TGG 0.581742 4_3:+34616440 None:intergenic
GTCGGAATTGGACTCGCCGG+CGG 0.582012 4_3:-34619238 Msa0638980:CDS
TGAAAGCATAACCGAAGAGA+GGG 0.585109 4_3:+34616000 None:intergenic
TGATTTAAAGAAAATATGAT+GGG 0.588886 4_3:+34610063 None:intergenic
AAGCATGTCCAACACGATGT+AGG 0.590951 4_3:+34616432 None:intergenic
ACGCTTCCAATCCCAAACTC+TGG 0.591346 4_3:-34619267 Msa0638980:CDS
CAAGTGAAAATCAATAGCTG+TGG 0.595023 4_3:-34610324 Msa0638980:three_prime_UTR
TGCATTTGGAAGAACTCCAA+TGG 0.595067 4_3:+34616770 None:intergenic
AAACCTCTGTTGATGAGTTG+CGG 0.599771 4_3:-34610213 Msa0638980:three_prime_UTR
ATGTAGGACAGATGGATCGC+GGG 0.601892 4_3:+34616448 None:intergenic
AGATTAGCATCCTTGTTCTG+TGG 0.602127 4_3:+34610413 None:intergenic
TGACGTGAAGGGCTATGTGA+CGG 0.604250 4_3:-34617958 Msa0638980:CDS
TTTGTAGGTACTGATACTAC+AGG 0.606632 4_3:-34616861 Msa0638980:intron
AATCAGGTTTAGGAGTGTTG+CGG 0.609654 4_3:+34619176 None:intergenic
ATGCCATCGTGTGTCCCGGG+AGG 0.611741 4_3:-34617673 Msa0638980:CDS
CCATCTGTCCTACATCGTGT+TGG 0.612343 4_3:-34616440 Msa0638980:CDS
GTAGATATAGCCCCGTGGGA+TGG 0.613089 4_3:+34616792 None:intergenic
CAGCTTCAGTGATTGCGACA+TGG 0.613605 4_3:+34619300 None:intergenic
GGAGAGAACGACGATCCCGC+CGG 0.617744 4_3:+34619222 None:intergenic
AGAAGAAAGAAGTTGCTTGG+CGG 0.619812 4_3:+34619096 None:intergenic
ACGTGAAGGGCTATGTGACG+GGG 0.625068 4_3:-34617956 Msa0638980:CDS
GACCCTCCCGGGACACACGA+TGG 0.626294 4_3:+34617670 None:intergenic
TTGATTGTCCAACAGGATGG+TGG 0.629395 4_3:-34613739 Msa0638980:intron
GTCCCGGGAGGGTCTTCTAG+TGG 0.632372 4_3:-34617661 Msa0638980:CDS
AATGGTAGATATAGCCCCGT+GGG 0.633257 4_3:+34616788 None:intergenic
AATTTCCATGCAGAATGTGA+AGG 0.637176 4_3:-34610879 Msa0638980:intron
CTGCTAGAGAATCACTACTT+CGG 0.637341 4_3:-34610838 Msa0638980:CDS
AGTGGACTGTCTGCTACAGA+GGG 0.640471 4_3:+34613703 None:intergenic
ATCACTACTTCGGTATAAGG+AGG 0.642249 4_3:-34610828 Msa0638980:CDS
AAACATGTTTGGGCACAACA+CGG 0.647262 4_3:+34614444 None:intergenic
GGAGGCGGAGAAGACTGCGA+TGG 0.655149 4_3:-34617901 Msa0638980:CDS
GGGTTAAATCAGTCAAACGC+AGG 0.661250 4_3:-34614472 Msa0638980:CDS
GACCGCTCTGCTCTTCAATG+GGG 0.669457 4_3:-34617874 Msa0638980:CDS
GTGGAAGAGAACGCACGAGG+AGG 0.677450 4_3:-34617919 Msa0638980:CDS
AGGCAGTCACTCACTATACG+GGG 0.684444 4_3:-34611491 Msa0638980:CDS
GTGAAGGCATATCTGAGACG+TGG 0.687956 4_3:-34610863 Msa0638980:CDS
CAATGGTAGATATAGCCCCG+TGG 0.695840 4_3:+34616787 None:intergenic
GATGTAGGACAGATGGATCG+CGG 0.698946 4_3:+34616447 None:intergenic
TGTGTGGAAGAGAACGCACG+AGG 0.709260 4_3:-34617922 Msa0638980:CDS
CGGGGTTTGGAAATCCTGTG+TGG 0.712644 4_3:-34617938 Msa0638980:CDS
GGCAGTCACTCACTATACGG+GGG 0.716872 4_3:-34611490 Msa0638980:CDS
ATGCGCTTTAAAATGTACAG+AGG 0.717082 4_3:+34610088 None:intergenic
TCATTCATCTCAAACCATGG+AGG 0.721307 4_3:-34613437 Msa0638980:CDS
ATGCCGCAACTCATCAACAG+AGG 0.733140 4_3:+34610210 None:intergenic
AGCCCCATTGAAGAGCAGAG+CGG 0.748277 4_3:+34617872 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTATGTTTTATATTTCT+TGG - chr4_3:34610964-34610983 Msa0638980:intron 10.0%
!!! ATTTATGTTTTATATTTCTT+GGG - chr4_3:34610965-34610984 Msa0638980:intron 10.0%
!!! TTATTACATTCTTAATATTT+TGG - chr4_3:34611905-34611924 Msa0638980:intron 10.0%
!!! TTTTTTAATTCATGATTAAT+GGG - chr4_3:34612446-34612465 Msa0638980:intron 10.0%
!!! TGAAATATTTTTTGAAAATT+AGG + chr4_3:34614602-34614621 None:intergenic 10.0%
!!! ATTTTTATTTAAAATATTCC+AGG + chr4_3:34614726-34614745 None:intergenic 10.0%
!!! ATAAAAATTGAAAGATTTTT+AGG - chr4_3:34614738-34614757 Msa0638980:intron 10.0%
!!! TTAAATATTAGGTTATTTTT+AGG - chr4_3:34616733-34616752 Msa0638980:intron 10.0%
!! TATTAGAATAGAAAATAAAT+TGG + chr4_3:34618198-34618217 None:intergenic 10.0%
!!! TTATTTTCTATTCTAATATT+TGG - chr4_3:34618200-34618219 Msa0638980:intron 10.0%
!! GTAAATTTACATAAAATTTA+AGG + chr4_3:34618634-34618653 None:intergenic 10.0%
!!! GAAATATTAATATATGATTT+TGG - chr4_3:34619126-34619145 Msa0638980:CDS 10.0%
!!! TTTTTATACTTTTTCTTTGA+TGG - chr4_3:34610441-34610460 Msa0638980:CDS 15.0%
!!! TTTTATACTTTTTCTTTGAT+GGG - chr4_3:34610442-34610461 Msa0638980:CDS 15.0%
!!! TTTTTATACATTTCTTTTGA+TGG - chr4_3:34610523-34610542 Msa0638980:intron 15.0%
!!! TTTTATACATTTCTTTTGAT+GGG - chr4_3:34610524-34610543 Msa0638980:intron 15.0%
!!! TTTTTTTGTTTTATGTTTCT+TGG - chr4_3:34610782-34610801 Msa0638980:intron 15.0%
!!! TTTTTTGTTTTATGTTTCTT+GGG - chr4_3:34610783-34610802 Msa0638980:intron 15.0%
!!! TTTATGTTTTATATTTCTTG+GGG - chr4_3:34610966-34610985 Msa0638980:intron 15.0%
!!! AAAAACTAACACTTTTTTTA+TGG + chr4_3:34611038-34611057 None:intergenic 15.0%
!!! GTTAATGTTTTTTTAAGTAT+CGG - chr4_3:34611074-34611093 Msa0638980:intron 15.0%
!!! AACTCAACAAATTTTAAAAA+TGG + chr4_3:34611101-34611120 None:intergenic 15.0%
!!! ATTTTTTGTTTTTTGTTTCT+TGG - chr4_3:34611130-34611149 Msa0638980:intron 15.0%
!!! TTTAGTACTTATATTCATTT+TGG - chr4_3:34611998-34612017 Msa0638980:intron 15.0%
!!! CTTTTTTAATTCATGATTAA+TGG - chr4_3:34612445-34612464 Msa0638980:intron 15.0%
!!! TTCTTTAGTTTATAAATTGT+TGG - chr4_3:34614060-34614079 Msa0638980:intron 15.0%
!! AACTTATAACAACATAATAA+GGG + chr4_3:34615207-34615226 None:intergenic 15.0%
!! TAACTTATAACAACATAATA+AGG + chr4_3:34615208-34615227 None:intergenic 15.0%
!!! ATATTTTCTTTGATAACTTT+TGG - chr4_3:34615278-34615297 Msa0638980:intron 15.0%
!!! TTATTGCTCTAAAATTTTTA+TGG - chr4_3:34615887-34615906 Msa0638980:intron 15.0%
!! TGAATTTGAACTTAAATATT+AGG - chr4_3:34616722-34616741 Msa0638980:intron 15.0%
!! CTAATATAGTAAAAAAATCT+TGG - chr4_3:34616796-34616815 Msa0638980:CDS 15.0%
!!! AAGATTTTTTTTTTTTTTGC+AGG - chr4_3:34617875-34617894 Msa0638980:CDS 15.0%
!!! AGATTTTTTTTTTTTTTGCA+GGG - chr4_3:34617876-34617895 Msa0638980:CDS 15.0%
!! TATAGAAAGTTATACAAATT+CGG + chr4_3:34618463-34618482 None:intergenic 15.0%
!! TGATTTAAAGAAAATATGAT+GGG + chr4_3:34619362-34619381 None:intergenic 15.0%
!! ATGATTTAAAGAAAATATGA+TGG + chr4_3:34619363-34619382 None:intergenic 15.0%
!! TTGGAAGAAAAATAAAGAAT+GGG + chr4_3:34610072-34610091 None:intergenic 20.0%
!! ATTGGAAGAAAAATAAAGAA+TGG + chr4_3:34610073-34610092 None:intergenic 20.0%
!!! TTTATACTTTTTCTTTGATG+GGG - chr4_3:34610443-34610462 Msa0638980:intron 20.0%
!! ATTATTTGAGTAGAAAAGAT+TGG - chr4_3:34610499-34610518 Msa0638980:intron 20.0%
!! TTATTTGAGTAGAAAAGATT+GGG - chr4_3:34610500-34610519 Msa0638980:intron 20.0%
!!! TTTATACATTTCTTTTGATG+GGG - chr4_3:34610525-34610544 Msa0638980:intron 20.0%
!!! TGATATTATGTTTTAAGCTT+TGG - chr4_3:34610565-34610584 Msa0638980:intron 20.0%
!! ATTATTTGAGTAGAAAAGAT+TGG - chr4_3:34610499-34610518 Msa0638980:intron 20.0%
!!! TTTTATCACTTTTTCTTTGA+TGG - chr4_3:34610616-34610635 Msa0638980:intron 20.0%
!!! TTTATCACTTTTTCTTTGAT+GGG - chr4_3:34610617-34610636 Msa0638980:intron 20.0%
!!! AAAAACTAACACATCTTTTA+TGG + chr4_3:34610689-34610708 None:intergenic 20.0%
!!! TGGTTAGTTTTTAGTTTTAT+TGG - chr4_3:34610747-34610766 Msa0638980:intron 20.0%
!!! GGTTAGTTTTTAGTTTTATT+GGG - chr4_3:34610748-34610767 Msa0638980:intron 20.0%
!!! TTTTTGTTTTATGTTTCTTG+GGG - chr4_3:34610784-34610803 Msa0638980:intron 20.0%
!! AAAAACTAAAACTTCCTTTA+TGG + chr4_3:34611216-34611235 None:intergenic 20.0%
!!! ATAAAGGAAGTTTTAGTTTT+TGG - chr4_3:34611215-34611234 Msa0638980:intron 20.0%
!!! TTGTTATGTTTTTTAAGCAT+TGG - chr4_3:34611256-34611275 Msa0638980:intron 20.0%
!! AAAAAACTAACTCTTTGATT+CGG + chr4_3:34611299-34611318 None:intergenic 20.0%
!!! TTTTTTTATGTTGTGTTTGT+TGG - chr4_3:34611326-34611345 Msa0638980:intron 20.0%
!!! TTTTTTATGTTGTGTTTGTT+GGG - chr4_3:34611327-34611346 Msa0638980:intron 20.0%
!! TAGAGGTAGAAATTATTTAT+AGG + chr4_3:34611847-34611866 None:intergenic 20.0%
!!! CTTAATATTTTGGTCATTTA+TGG - chr4_3:34611915-34611934 Msa0638980:intron 20.0%
!! TTGTTATCCATACAATATAA+GGG - chr4_3:34612330-34612349 Msa0638980:intron 20.0%
!! TCATGAATTAAAAAAGAAAC+AGG + chr4_3:34612441-34612460 None:intergenic 20.0%
!!! TGTGTAATTATTAAGTGTTT+TGG - chr4_3:34613271-34613290 Msa0638980:intron 20.0%
!! TCATAATAGAAAAAATGACA+AGG - chr4_3:34613486-34613505 Msa0638980:intron 20.0%
!! TTCTCAAAAAAGAAGAAAAA+GGG - chr4_3:34613558-34613577 Msa0638980:intron 20.0%
!! TAAACTAAAGAAAAAATCGA+AGG + chr4_3:34614052-34614071 None:intergenic 20.0%
!! GAATAAAGAAAAGAAAGTTT+AGG + chr4_3:34614652-34614671 None:intergenic 20.0%
!! TTAAATCCAATTATGAAGAA+TGG - chr4_3:34614929-34614948 Msa0638980:intron 20.0%
!! TAAATCCAATTATGAAGAAT+GGG - chr4_3:34614930-34614949 Msa0638980:intron 20.0%
!! ATTATCGTATGTAGTATTAA+TGG + chr4_3:34615010-34615029 None:intergenic 20.0%
!!! TTCTTGTACAATTTCTTTTA+TGG - chr4_3:34615174-34615193 Msa0638980:intron 20.0%
!!! TAGAATTGCCTAAATTATTT+TGG + chr4_3:34615406-34615425 None:intergenic 20.0%
!! AAAAATAAAACTCTCCTATT+TGG - chr4_3:34616372-34616391 Msa0638980:CDS 20.0%
!!! CAACTTTGCTATTAAAATAA+GGG + chr4_3:34616929-34616948 None:intergenic 20.0%
!!! TCAACTTTGCTATTAAAATA+AGG + chr4_3:34616930-34616949 None:intergenic 20.0%
!!! AAAGTAGCATCAATTTTATT+AGG + chr4_3:34617426-34617445 None:intergenic 20.0%
!! ATTTGAATGAACAATTAATC+AGG + chr4_3:34617742-34617761 None:intergenic 20.0%
!! GTGATTTATATGCTATAAAT+CGG - chr4_3:34617824-34617843 Msa0638980:intron 20.0%
!! TGATTTATATGCTATAAATC+GGG - chr4_3:34617825-34617844 Msa0638980:intron 20.0%
!!! AAAGATTCCTTTATTTTGTT+GGG - chr4_3:34618415-34618434 Msa0638980:intron 20.0%
!! GATTCTTTAAATTATGATAC+CGG - chr4_3:34618437-34618456 Msa0638980:intron 20.0%
!!! AGAAAACATTTTTCTAGAAT+TGG - chr4_3:34619410-34619429 Msa0638980:five_prime_UTR 20.0%
! AGAGTTGAGAAAGAATATTT+AGG + chr4_3:34610020-34610039 None:intergenic 25.0%
!!! GAAAAATAAAGAATGGGTTT+TGG + chr4_3:34610066-34610085 None:intergenic 25.0%
!!! AGAATATGTGTTTTAAGCTT+TGG - chr4_3:34610472-34610491 Msa0638980:intron 25.0%
!!! TTATCACTTTTTCTTTGATG+GGG - chr4_3:34610618-34610637 Msa0638980:intron 25.0%
!!! TGTTAGTGTTTTTTAAGCAT+TGG - chr4_3:34610727-34610746 Msa0638980:intron 25.0%
!!! TTTTTATGTTGTGTTTGTTG+GGG - chr4_3:34611328-34611347 Msa0638980:intron 25.0%
! TCACATACTAAACTTTGATT+CGG + chr4_3:34611394-34611413 None:intergenic 25.0%
!! TAGTATGTGACATTTTTATC+TGG - chr4_3:34611404-34611423 Msa0638980:intron 25.0%
!! AGTATGTGACATTTTTATCT+GGG - chr4_3:34611405-34611424 Msa0638980:intron 25.0%
!! TTATGGATGAATTCTCTTTT+GGG - chr4_3:34611592-34611611 Msa0638980:intron 25.0%
! AAGATAACTATACAGAACTA+AGG + chr4_3:34611638-34611657 None:intergenic 25.0%
!! CATTATTATCTCAGATTTTC+TGG - chr4_3:34611689-34611708 Msa0638980:intron 25.0%
! TGCTTGAAATGCAAATTATA+AGG - chr4_3:34611869-34611888 Msa0638980:intron 25.0%
! ATGCAAATTATAAGGTTTAC+TGG - chr4_3:34611877-34611896 Msa0638980:intron 25.0%
!! TATTGAAACCTCTCATATTT+TGG - chr4_3:34611960-34611979 Msa0638980:intron 25.0%
! GTGCTAATATTTCAAATGTT+TGG - chr4_3:34612240-34612259 Msa0638980:intron 25.0%
! CTTATATTGTATGGATAACA+AGG + chr4_3:34612331-34612350 None:intergenic 25.0%
!! CTTGTTATCCATACAATATA+AGG - chr4_3:34612329-34612348 Msa0638980:intron 25.0%
! AAAGATTATTGTGTCTTTGT+AGG - chr4_3:34612546-34612565 Msa0638980:intron 25.0%
!!! GTTTTTGCTATGATTATGAT+TGG - chr4_3:34612716-34612735 Msa0638980:intron 25.0%
! ATAAGAAATTACACATAGTG+AGG - chr4_3:34612856-34612875 Msa0638980:intron 25.0%
! TTTACTTCAATTGAATTCAG+TGG - chr4_3:34613011-34613030 Msa0638980:intron 25.0%
! CAAAAGACAATATATGTCAT+TGG - chr4_3:34613099-34613118 Msa0638980:intron 25.0%
!!! TGAAAACCAATTTTTTTTCC+TGG - chr4_3:34613165-34613184 Msa0638980:intron 25.0%
! AAATCTCCAGGAAAAAAAAT+TGG + chr4_3:34613174-34613193 None:intergenic 25.0%
!!! CTCTAAAATTACCAAACAAA+AGG - chr4_3:34613243-34613262 Msa0638980:intron 25.0%
!! TACACAAAATTCCTTTTGTT+TGG + chr4_3:34613257-34613276 None:intergenic 25.0%
!!! ATTAAGTGTTTTGGTCATTT+TGG - chr4_3:34613280-34613299 Msa0638980:intron 25.0%
! TTGTGAGTATATTGCTAAAA+AGG - chr4_3:34613336-34613355 Msa0638980:CDS 25.0%
!! TATAGATGTTCCATTTTGTT+GGG + chr4_3:34613395-34613414 None:intergenic 25.0%
!! ATATAGATGTTCCATTTTGT+TGG + chr4_3:34613396-34613415 None:intergenic 25.0%
! ACGAGTAAAGAATTAAGTAT+TGG - chr4_3:34613531-34613550 Msa0638980:intron 25.0%
! GTTCTCAAAAAAGAAGAAAA+AGG - chr4_3:34613557-34613576 Msa0638980:intron 25.0%
! TCTCAAAAAAGAAGAAAAAG+GGG - chr4_3:34613559-34613578 Msa0638980:intron 25.0%
!! TTCATTTTGCCTCTTTAAAT+GGG + chr4_3:34613637-34613656 None:intergenic 25.0%
!! ATTCATTTTGCCTCTTTAAA+TGG + chr4_3:34613638-34613657 None:intergenic 25.0%
!! TTCAGCTTATAACTTTTCTT+TGG + chr4_3:34613679-34613698 None:intergenic 25.0%
! TGTTATAACATACAAGTCTT+TGG + chr4_3:34614287-34614306 None:intergenic 25.0%
!!! TCTATTCTAGGTTTGTTAAA+CGG + chr4_3:34614412-34614431 None:intergenic 25.0%
! TCTAATCAATTACTGAATGT+GGG - chr4_3:34614525-34614544 Msa0638980:intron 25.0%
! CACATATACTAAATGATACT+GGG + chr4_3:34614674-34614693 None:intergenic 25.0%
! TCACATATACTAAATGATAC+TGG + chr4_3:34614675-34614694 None:intergenic 25.0%
!!! AATTGAAAGATTTTTAGGAC+AGG - chr4_3:34614743-34614762 Msa0638980:intron 25.0%
! TTTAACCCATTCTTCATAAT+TGG + chr4_3:34614938-34614957 None:intergenic 25.0%
!! GTACAATTTCTTTTATGGTA+AGG - chr4_3:34615179-34615198 Msa0638980:intron 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr4_3:34615514-34615533 Msa0638980:intron 25.0%
! GTTCTATCATAAACCAAATT+TGG + chr4_3:34615554-34615573 None:intergenic 25.0%
! ATAATGCAAAACTTCTATCA+TGG + chr4_3:34615781-34615800 None:intergenic 25.0%
!!! TTCTATAATCATTTTTCTGC+AGG - chr4_3:34616148-34616167 Msa0638980:intron 25.0%
!!! ATAGGAGAGTTTTATTTTTC+TGG + chr4_3:34616371-34616390 None:intergenic 25.0%
! TATAAAAGAGGGAAATGATT+TGG + chr4_3:34616450-34616469 None:intergenic 25.0%
! TTTGCATCTCATCATTTAAA+GGG + chr4_3:34616530-34616549 None:intergenic 25.0%
! ATTTGCATCTCATCATTTAA+AGG + chr4_3:34616531-34616550 None:intergenic 25.0%
! TCCTCATTTAATAACAACTT+CGG + chr4_3:34616564-34616583 None:intergenic 25.0%
!!! CTTTGGAGTAAAAAGATTTA+AGG + chr4_3:34616602-34616621 None:intergenic 25.0%
!! TTTTTACTCCAAAGTATGAT+TGG - chr4_3:34616608-34616627 Msa0638980:intron 25.0%
!!! ACAGTTTTTTGTAAAAGGTT+CGG + chr4_3:34616642-34616661 None:intergenic 25.0%
!!! AGTTACATTTTGCTTGTTTT+AGG - chr4_3:34617121-34617140 Msa0638980:intron 25.0%
!! TAGGTAATAAGTTGAGAAAA+TGG + chr4_3:34617407-34617426 None:intergenic 25.0%
! GAAATAGTAGAAGAAATAGA+TGG + chr4_3:34617471-34617490 None:intergenic 25.0%
! TTCCTTGTTAATAATCTATG+TGG - chr4_3:34617507-34617526 Msa0638980:intron 25.0%
! ATCCACATAGATTATTAACA+AGG + chr4_3:34617512-34617531 None:intergenic 25.0%
!! ATACTTTTGAATTGGGTAAA+AGG + chr4_3:34617644-34617663 None:intergenic 25.0%
!! TTTTACCCAATTCAAAAGTA+TGG - chr4_3:34617643-34617662 Msa0638980:CDS 25.0%
! ATATAGTCATCTATTATCTG+TGG - chr4_3:34617687-34617706 Msa0638980:CDS 25.0%
! GATCAAGAACTAAAAACTAA+AGG + chr4_3:34617800-34617819 None:intergenic 25.0%
! GATTTATATGCTATAAATCG+GGG - chr4_3:34617826-34617845 Msa0638980:intron 25.0%
! ATAGAAAATAAATTGGTCCA+TGG + chr4_3:34618191-34618210 None:intergenic 25.0%
! CAACAAAATAAAGGAATCTT+TGG + chr4_3:34618416-34618435 None:intergenic 25.0%
!!! CAAAGATTCCTTTATTTTGT+TGG - chr4_3:34618414-34618433 Msa0638980:intron 25.0%
! AAAGAATCCCAACAAAATAA+AGG + chr4_3:34618425-34618444 None:intergenic 25.0%
!!! TACATCATTTCTGTTTTTAG+TGG - chr4_3:34618686-34618705 Msa0638980:intron 25.0%
! CATAAGAAAGAGAAAGAAAA+AGG + chr4_3:34618955-34618974 None:intergenic 25.0%
!! GGTTGAATAATATTTCTAAC+AGG + chr4_3:34619260-34619279 None:intergenic 25.0%
! GAAATATTATTCAACCCTAT+TGG - chr4_3:34619264-34619283 Msa0638980:CDS 25.0%
! ATTATTGGCAAAATCCAATA+GGG + chr4_3:34619281-34619300 None:intergenic 25.0%
! AATTATTGGCAAAATCCAAT+AGG + chr4_3:34619282-34619301 None:intergenic 25.0%
! ATATATGGGTGCAAAATTAT+TGG + chr4_3:34619296-34619315 None:intergenic 25.0%
!! ATTTTGCACCCATATATATA+AGG - chr4_3:34619299-34619318 Msa0638980:CDS 25.0%
! TAGGTCAACCTTATATATAT+GGG + chr4_3:34619310-34619329 None:intergenic 25.0%
!!! ATAAAGAATGGGTTTTGGAA+GGG + chr4_3:34610061-34610080 None:intergenic 30.0%
!!! AATAAAGAATGGGTTTTGGA+AGG + chr4_3:34610062-34610081 None:intergenic 30.0%
TCAGAGAAAATGTGTGAAAT+TGG + chr4_3:34610091-34610110 None:intergenic 30.0%
!! TCAATAAAAGCACCAAAATC+AGG + chr4_3:34610265-34610284 None:intergenic 30.0%
!! CAATACTTAATTTGCCATGA+AGG - chr4_3:34610852-34610871 Msa0638980:CDS 30.0%
AAAAACTAACACATCCTTCA+TGG + chr4_3:34610869-34610888 None:intergenic 30.0%
!! CAACATTTGATTTGCCATAA+AGG - chr4_3:34611199-34611218 Msa0638980:intron 30.0%
!! TTTTTCAGATTTGACGTGAA+GGG - chr4_3:34611453-34611472 Msa0638980:CDS 30.0%
! GTTATGGATGAATTCTCTTT+TGG - chr4_3:34611591-34611610 Msa0638980:intron 30.0%
TTTGCATTTCAAGCAATTAG+AGG + chr4_3:34611864-34611883 None:intergenic 30.0%
GTAAATGACCAAAATATGAG+AGG + chr4_3:34611971-34611990 None:intergenic 30.0%
ATTCTACTAAACTACATTCC+TGG - chr4_3:34612053-34612072 Msa0638980:intron 30.0%
ATTCAATAGAACAAGCTAAC+AGG + chr4_3:34612137-34612156 None:intergenic 30.0%
!! CAAATATTTTTGAGCTGGAA+GGG + chr4_3:34612169-34612188 None:intergenic 30.0%
!! TCAAATATTTTTGAGCTGGA+AGG + chr4_3:34612170-34612189 None:intergenic 30.0%
!! CAGATCAAATATTTTTGAGC+TGG + chr4_3:34612174-34612193 None:intergenic 30.0%
CAGCTCAAAAATATTTGATC+TGG - chr4_3:34612172-34612191 Msa0638980:intron 30.0%
GTTAGTAATATTACACCTTG+TGG - chr4_3:34612290-34612309 Msa0638980:intron 30.0%
AAAAGAAACAGGATTATGCA+TGG + chr4_3:34612430-34612449 None:intergenic 30.0%
CTTACAATTATACCATGTTG+TGG - chr4_3:34612471-34612490 Msa0638980:intron 30.0%
AATCAAACAAACAGCTATTG+AGG + chr4_3:34612497-34612516 None:intergenic 30.0%
TCATGTTCTCATACATAGTT+AGG + chr4_3:34612527-34612546 None:intergenic 30.0%
AAAACTATGCATCTTACCAA+TGG + chr4_3:34612691-34612710 None:intergenic 30.0%
TGATTACTTAATTGCATTGC+AGG - chr4_3:34612943-34612962 Msa0638980:intron 30.0%
! TATGATACACCTTGACTTTT+TGG + chr4_3:34613040-34613059 None:intergenic 30.0%
ATCAATTTCACTAAATCTCC+AGG + chr4_3:34613186-34613205 None:intergenic 30.0%
! ATAGATGTTCCATTTTGTTG+GGG + chr4_3:34613394-34613413 None:intergenic 30.0%
TATATTGAAAACCCTCTCTT+CGG - chr4_3:34613411-34613430 Msa0638980:CDS 30.0%
GAAAAAATGACAAGGTAGTA+AGG - chr4_3:34613494-34613513 Msa0638980:intron 30.0%
CTCAAAAAAGAAGAAAAAGG+GGG - chr4_3:34613560-34613579 Msa0638980:intron 30.0%
TAAAGAGGCAAAATGAATCT+TGG - chr4_3:34613640-34613659 Msa0638980:CDS 30.0%
AGTTATAAGCTGAACACAAA+AGG - chr4_3:34613685-34613704 Msa0638980:CDS 30.0%
ACACAAAAGGCAATTTATAC+TGG - chr4_3:34613698-34613717 Msa0638980:CDS 30.0%
!! AGTTGCTTATTTTTCATAGC+TGG + chr4_3:34613763-34613782 None:intergenic 30.0%
TAAACGCAACACAGATTAAT+CGG + chr4_3:34613998-34614017 None:intergenic 30.0%
! AGAAAAAATCGAAGGCATAA+TGG + chr4_3:34614044-34614063 None:intergenic 30.0%
AGATTTCATGAACAACAAGT+TGG + chr4_3:34614114-34614133 None:intergenic 30.0%
CATGAAATCTACCAAAAACA+AGG - chr4_3:34614124-34614143 Msa0638980:intron 30.0%
!!! CAATTTACATGCCTTGTTTT+TGG + chr4_3:34614138-34614157 None:intergenic 30.0%
AACTCTCTTATCATTGTCAA+CGG - chr4_3:34614163-34614182 Msa0638980:intron 30.0%
!! CATATTCTAAGATTCAAGGA+TGG + chr4_3:34614215-34614234 None:intergenic 30.0%
!! AGCACATATTCTAAGATTCA+AGG + chr4_3:34614219-34614238 None:intergenic 30.0%
TGTATGTTATAACAACCACA+AGG - chr4_3:34614293-34614312 Msa0638980:intron 30.0%
CTCTAATCAATTACTGAATG+TGG - chr4_3:34614524-34614543 Msa0638980:intron 30.0%
! ATTTAAAATATTCCAGGCAC+AGG + chr4_3:34614720-34614739 None:intergenic 30.0%
ATGGCTTCATAAACATGTTT+GGG + chr4_3:34614991-34615010 None:intergenic 30.0%
AATGGCTTCATAAACATGTT+TGG + chr4_3:34614992-34615011 None:intergenic 30.0%
! TAAAAGCCTTGTATAAAGTC+AGG - chr4_3:34615031-34615050 Msa0638980:intron 30.0%
TGCATTTCAAAGTCTGTTAA+AGG - chr4_3:34615068-34615087 Msa0638980:intron 30.0%
CAAAGAAAATATTGTCACTC+TGG + chr4_3:34615270-34615289 None:intergenic 30.0%
ACTATGAGAATCAAAGATCT+AGG + chr4_3:34615376-34615395 None:intergenic 30.0%
TGAAGTGGCCAAAATAATTT+AGG - chr4_3:34615395-34615414 Msa0638980:intron 30.0%
ATTCTACTCTTATGTATCCA+TGG - chr4_3:34615420-34615439 Msa0638980:intron 30.0%
! GTTTCTCTAATAGTTTTCCT+AGG + chr4_3:34615497-34615516 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr4_3:34615519-34615538 None:intergenic 30.0%
TGGTTTATGATAGAACACTA+TGG - chr4_3:34615558-34615577 Msa0638980:intron 30.0%
ATCAAAACAAGGAGATAGTA+GGG + chr4_3:34615668-34615687 None:intergenic 30.0%
AATCAAAACAAGGAGATAGT+AGG + chr4_3:34615669-34615688 None:intergenic 30.0%
! TTCTTTGCATTAAGCTTTAG+TGG + chr4_3:34615740-34615759 None:intergenic 30.0%
CTAAAGCTTAATGCAAAGAA+AGG - chr4_3:34615740-34615759 Msa0638980:intron 30.0%
!!! TTTTTTGACTCTAGAGCTAA+AGG + chr4_3:34615848-34615867 None:intergenic 30.0%
ATTGCTCTTACATTATTTCC+AGG - chr4_3:34615918-34615937 Msa0638980:intron 30.0%
CAATCATCATGATATCCTAA+AGG + chr4_3:34615952-34615971 None:intergenic 30.0%
ATTTCTTCTAGACACTATCT+TGG - chr4_3:34616014-34616033 Msa0638980:CDS 30.0%
!! ATTGATGTTTGGTAATGGAA+TGG + chr4_3:34616085-34616104 None:intergenic 30.0%
ATTCCATTACCAAACATCAA+TGG - chr4_3:34616084-34616103 Msa0638980:CDS 30.0%
TTTCCATTGATGTTTGGTAA+TGG + chr4_3:34616090-34616109 None:intergenic 30.0%
! CTTTAAAAGTTCAGAAGGTT+CGG + chr4_3:34616115-34616134 None:intergenic 30.0%
! TTCTCCTTTAAAAGTTCAGA+AGG + chr4_3:34616120-34616139 None:intergenic 30.0%
!! TTCTGAACTTTTAAAGGAGA+AGG - chr4_3:34616119-34616138 Msa0638980:intron 30.0%
AATAAAACTCTCCTATTTGG+TGG - chr4_3:34616375-34616394 Msa0638980:CDS 30.0%
!! GTTGAGAGTGTTATAAAAGA+GGG + chr4_3:34616461-34616480 None:intergenic 30.0%
!! TGTTGAGAGTGTTATAAAAG+AGG + chr4_3:34616462-34616481 None:intergenic 30.0%
TTGCATCTCATCATTTAAAG+GGG + chr4_3:34616529-34616548 None:intergenic 30.0%
! TCCGAAGTTGTTATTAAATG+AGG - chr4_3:34616560-34616579 Msa0638980:intron 30.0%
! GTTGTTATTAAATGAGGACT+TGG - chr4_3:34616566-34616585 Msa0638980:intron 30.0%
! TGCATTTTCCAATCATACTT+TGG + chr4_3:34616619-34616638 None:intergenic 30.0%
!!! CGCTTACAGTTTTTTGTAAA+AGG + chr4_3:34616647-34616666 None:intergenic 30.0%
AAATTACCTCTCTGAACTTT+GGG + chr4_3:34617224-34617243 None:intergenic 30.0%
AAAATTACCTCTCTGAACTT+TGG + chr4_3:34617225-34617244 None:intergenic 30.0%
ATAAGCTATCCATACAGAAT+CGG + chr4_3:34617314-34617333 None:intergenic 30.0%
AAGAAATAGATGGAACACAA+TGG + chr4_3:34617461-34617480 None:intergenic 30.0%
AGACTGACATTTATGTTAAG+GGG + chr4_3:34617615-34617634 None:intergenic 30.0%
GAGACTGACATTTATGTTAA+GGG + chr4_3:34617616-34617635 None:intergenic 30.0%
AGAGACTGACATTTATGTTA+AGG + chr4_3:34617617-34617636 None:intergenic 30.0%
! ATCAGCCATACTTTTGAATT+GGG + chr4_3:34617651-34617670 None:intergenic 30.0%
! TCATTCAAATTTTATCCACG+AGG - chr4_3:34617752-34617771 Msa0638980:intron 30.0%
ACTAAAAACTAAAGGATGTC+CGG + chr4_3:34617792-34617811 None:intergenic 30.0%
GGCATTTAAAGAAAAGCAAT+GGG - chr4_3:34617905-34617924 Msa0638980:CDS 30.0%
TAAAGAAAAGCAATGGGATA+AGG - chr4_3:34617911-34617930 Msa0638980:CDS 30.0%
TAGAACAGTTGGTTATTAGA+GGG + chr4_3:34618247-34618266 None:intergenic 30.0%
CATCAAACTGATCATTATCA+AGG + chr4_3:34618383-34618402 None:intergenic 30.0%
TGGAAATTACACACTATTCT+CGG + chr4_3:34618502-34618521 None:intergenic 30.0%
!!! AAATATCTTTTTTCCGTTCC+TGG - chr4_3:34618660-34618679 Msa0638980:intron 30.0%
AAATGATGTATTTCCAGGAA+CGG + chr4_3:34618676-34618695 None:intergenic 30.0%
AACAGAAATGATGTATTTCC+AGG + chr4_3:34618681-34618700 None:intergenic 30.0%
!! ATATATCATTTCTGAGACAC+TGG - chr4_3:34618803-34618822 Msa0638980:intron 30.0%
AGAAAGAAAAAGGACCATTA+AGG + chr4_3:34618945-34618964 None:intergenic 30.0%
TCAAAATACCTTCATTCTGA+AGG + chr4_3:34619174-34619193 None:intergenic 30.0%
!!! CAGAATGAAGGTATTTTGAA+AGG - chr4_3:34619175-34619194 Msa0638980:CDS 30.0%
CTAGGTCAACCTTATATATA+TGG + chr4_3:34619311-34619330 None:intergenic 30.0%
! AACACTCCTAAACCTGATTT+TGG - chr4_3:34610250-34610269 Msa0638980:three_prime_UTR 35.0%
! AAAGCACCAAAATCAGGTTT+AGG + chr4_3:34610259-34610278 None:intergenic 35.0%
!!! ATACTTTTTCTTTGATGGGG+TGG - chr4_3:34610446-34610465 Msa0638980:intron 35.0%
! ATTTTTATCTGGGTGTGATG+AGG - chr4_3:34611415-34611434 Msa0638980:intron 35.0%
!! GTTTTTCAGATTTGACGTGA+AGG - chr4_3:34611452-34611471 Msa0638980:CDS 35.0%
TCTGGTGAGAACAAGTATTA+TGG - chr4_3:34611707-34611726 Msa0638980:intron 35.0%
AATATTACACCTTGTGGTAG+AGG - chr4_3:34612296-34612315 Msa0638980:intron 35.0%
ATATTACACCTTGTGGTAGA+GGG - chr4_3:34612297-34612316 Msa0638980:intron 35.0%
ATTACGGCCCTTATATTGTA+TGG + chr4_3:34612340-34612359 None:intergenic 35.0%
CTGGGATCATGAAACTATTA+CGG + chr4_3:34612356-34612375 None:intergenic 35.0%
!! TTTGTAGGTACTGATACTAC+AGG - chr4_3:34612561-34612580 Msa0638980:intron 35.0%
AAAATACCACAAAGTGATGC+TGG + chr4_3:34612600-34612619 None:intergenic 35.0%
! GCATCACTTTGTGGTATTTT+TGG - chr4_3:34612600-34612619 Msa0638980:intron 35.0%
CATTCTTAAAGCAGATCACA+AGG + chr4_3:34612781-34612800 None:intergenic 35.0%
ATTACACATAGTGAGGTGAA+CGG - chr4_3:34612863-34612882 Msa0638980:intron 35.0%
TACTTAATTGCATTGCAGGA+TGG - chr4_3:34612947-34612966 Msa0638980:intron 35.0%
! TGTCTTTTGTGTAGCATCTT+TGG + chr4_3:34613088-34613107 None:intergenic 35.0%
AAAGCTATCGAGAATATGTC+TGG - chr4_3:34613123-34613142 Msa0638980:intron 35.0%
TATGTCTGGATGTAAGTTTC+TGG - chr4_3:34613137-34613156 Msa0638980:intron 35.0%
ATGTCTGGATGTAAGTTTCT+GGG - chr4_3:34613138-34613157 Msa0638980:intron 35.0%
!!! TCATTTTGGTTTTGCAGATC+AGG - chr4_3:34613294-34613313 Msa0638980:intron 35.0%
TCACAAAGATCCATATGCTT+TGG + chr4_3:34613322-34613341 None:intergenic 35.0%
CGGTTATGCTTTCAATACAA+AGG - chr4_3:34613431-34613450 Msa0638980:CDS 35.0%
AAGGTAGTAAGGATGAAAGA+GGG - chr4_3:34613505-34613524 Msa0638980:intron 35.0%
AAGGTTTGACCCATTTAAAG+AGG - chr4_3:34613625-34613644 Msa0638980:CDS 35.0%
GCTTCAGTTATCCAGTATAA+TGG + chr4_3:34613829-34613848 None:intergenic 35.0%
AAGTAATTGTTCAGTTGCTG+TGG - chr4_3:34613887-34613906 Msa0638980:intron 35.0%
CATAATGGCATATGATAGGT+CGG + chr4_3:34614029-34614048 None:intergenic 35.0%
AAGGCATAATGGCATATGAT+AGG + chr4_3:34614033-34614052 None:intergenic 35.0%
!!! CTATTTTTGCAGTCAGAGTT+AGG + chr4_3:34614245-34614264 None:intergenic 35.0%
TGACTGCAAAAATAGCTCAT+GGG - chr4_3:34614250-34614269 Msa0638980:intron 35.0%
TAGGGATAAAATAGACCTTG+TGG + chr4_3:34614311-34614330 None:intergenic 35.0%
!! CACATTCTAAGATGGTATCA+GGG + chr4_3:34614435-34614454 None:intergenic 35.0%
CAGCCTAAAAGTTAGCTAAA+GGG - chr4_3:34614458-34614477 Msa0638980:CDS 35.0%
! CAACCCTTTAGCTAACTTTT+AGG + chr4_3:34614464-34614483 None:intergenic 35.0%
AAAAGTTAGCTAAAGGGTTG+AGG - chr4_3:34614464-34614483 Msa0638980:CDS 35.0%
! AATCACTACTTTGTTTCCAG+TGG - chr4_3:34614626-34614645 Msa0638980:intron 35.0%
ATGTGAATCCCATATATCAC+TGG - chr4_3:34614689-34614708 Msa0638980:intron 35.0%
TGTGAATCCCATATATCACT+GGG - chr4_3:34614690-34614709 Msa0638980:intron 35.0%
AACTGAAAAATAGACAAGCC+TGG - chr4_3:34615241-34615260 Msa0638980:intron 35.0%
! AACTTTTGGATCGTCTTGAT+AGG - chr4_3:34615292-34615311 Msa0638980:intron 35.0%
! ACTTTTGGATCGTCTTGATA+GGG - chr4_3:34615293-34615312 Msa0638980:intron 35.0%
CTTTGATTCTCATAGTGAAG+TGG - chr4_3:34615380-34615399 Msa0638980:intron 35.0%
TTGATCTACTCTTCTTACCA+TGG + chr4_3:34615440-34615459 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG - chr4_3:34615441-34615460 Msa0638980:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr4_3:34615444-34615463 Msa0638980:intron 35.0%
AGTCAAGTTAAAAGAGGTAG+AGG - chr4_3:34615467-34615486 Msa0638980:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr4_3:34615526-34615545 Msa0638980:intron 35.0%
! CAATGAGTTGGATCCAAATT+TGG - chr4_3:34615538-34615557 Msa0638980:intron 35.0%
GTTTCATTCATCTCAAACCA+TGG - chr4_3:34615982-34616001 Msa0638980:intron 35.0%
TCGGTATTTCCATTGATGTT+TGG + chr4_3:34616096-34616115 None:intergenic 35.0%
! CGAACCTTCTGAACTTTTAA+AGG - chr4_3:34616113-34616132 Msa0638980:CDS 35.0%
!!! TTAGGCTTTGTTTTGGAGTT+AGG - chr4_3:34616249-34616268 Msa0638980:intron 35.0%
!! CGTTTTGAATTCCACCAAAT+AGG + chr4_3:34616389-34616408 None:intergenic 35.0%
AATTCAAAACGTATTGCGAG+AGG - chr4_3:34616398-34616417 Msa0638980:CDS 35.0%
ATTCAAAACGTATTGCGAGA+GGG - chr4_3:34616399-34616418 Msa0638980:CDS 35.0%
! AAGCTATCGAGCTTTTACTA+AGG + chr4_3:34616672-34616691 None:intergenic 35.0%
CAAACTGATGATCTGTTCAT+GGG - chr4_3:34616957-34616976 Msa0638980:intron 35.0%
AAATCAGGAAAATGTGTGGT+GGG + chr4_3:34617277-34617296 None:intergenic 35.0%
TGAGAAATCAGGAAAATGTG+TGG + chr4_3:34617281-34617300 None:intergenic 35.0%
CTGTATGGATAGCTTATTGT+TGG - chr4_3:34617317-34617336 Msa0638980:intron 35.0%
GAATTCAAGGAAAAGTCACA+AGG + chr4_3:34617349-34617368 None:intergenic 35.0%
AATCCAAGTGTACTTTGAGT+GGG + chr4_3:34617589-34617608 None:intergenic 35.0%
AAATCCAAGTGTACTTTGAG+TGG + chr4_3:34617590-34617609 None:intergenic 35.0%
! CATCAGCCATACTTTTGAAT+TGG + chr4_3:34617652-34617671 None:intergenic 35.0%
TATATGCTATAAATCGGGGT+TGG - chr4_3:34617830-34617849 Msa0638980:intron 35.0%
!!! TTTTTTTTTGCAGGGAAACG+CGG - chr4_3:34617884-34617903 Msa0638980:CDS 35.0%
CGGCATTTAAAGAAAAGCAA+TGG - chr4_3:34617904-34617923 Msa0638980:CDS 35.0%
AGGAAAATGGTTTAAGTGTG+AGG + chr4_3:34618057-34618076 None:intergenic 35.0%
CATAAGTTAACAGGTGAGAA+CGG + chr4_3:34618087-34618106 None:intergenic 35.0%
TGAAAGCTGCATAAGTTAAC+AGG + chr4_3:34618096-34618115 None:intergenic 35.0%
GGCAATATTGCTTGATAAGA+AGG - chr4_3:34618140-34618159 Msa0638980:intron 35.0%
TTGATAAGAAGGTGAGAAGA+TGG - chr4_3:34618151-34618170 Msa0638980:intron 35.0%
TGATAAGAAGGTGAGAAGAT+GGG - chr4_3:34618152-34618171 Msa0638980:intron 35.0%
GTAGAACAGTTGGTTATTAG+AGG + chr4_3:34618248-34618267 None:intergenic 35.0%
ATAACCAACTGTTCTACGAA+TGG - chr4_3:34618251-34618270 Msa0638980:intron 35.0%
TAACCAACTGTTCTACGAAT+GGG - chr4_3:34618252-34618271 Msa0638980:intron 35.0%
TTGTAACATCTCAGAACATG+AGG + chr4_3:34618283-34618302 None:intergenic 35.0%
ATCAGCTGCTATCAGTTAAA+GGG + chr4_3:34618347-34618366 None:intergenic 35.0%
AATCAGCTGCTATCAGTTAA+AGG + chr4_3:34618348-34618367 None:intergenic 35.0%
GAAAGTTATACAAATTCGGC+CGG + chr4_3:34618459-34618478 None:intergenic 35.0%
AATTTCCATGCAGAATGTGA+AGG - chr4_3:34618543-34618562 Msa0638980:intron 35.0%
AGAATCACTACTTCGGTATA+AGG - chr4_3:34618591-34618610 Msa0638980:intron 35.0%
ATATGAGAAGACGAGTGATA+TGG + chr4_3:34618874-34618893 None:intergenic 35.0%
TAAGGATGATATGAAGTGCA+AGG + chr4_3:34618927-34618946 None:intergenic 35.0%
GCACTTCATATCATCCTTAA+TGG - chr4_3:34618928-34618947 Msa0638980:intron 35.0%
!!! GCTATTGATTTTCACTTGGA+GGG + chr4_3:34619096-34619115 None:intergenic 35.0%
!!! AGCTATTGATTTTCACTTGG+AGG + chr4_3:34619097-34619116 None:intergenic 35.0%
!!! CACAGCTATTGATTTTCACT+TGG + chr4_3:34619100-34619119 None:intergenic 35.0%
CAAGTGAAAATCAATAGCTG+TGG - chr4_3:34619098-34619117 Msa0638980:CDS 35.0%
AAAATCAATAGCTGTGGATG+TGG - chr4_3:34619104-34619123 Msa0638980:CDS 35.0%
TAAAATGTACAGAGGCTACT+AGG + chr4_3:34619329-34619348 None:intergenic 35.0%
!! ATGCGCTTTAAAATGTACAG+AGG + chr4_3:34619337-34619356 None:intergenic 35.0%
!!! TCTGTACATTTTAAAGCGCA+TGG - chr4_3:34619336-34619355 Msa0638980:five_prime_UTR 35.0%
GCAATCACTGAAGCTGATTA+AGG - chr4_3:34610129-34610148 Msa0638980:three_prime_UTR 40.0%
! GATTAACCAGAGTTTGGGAT+TGG + chr4_3:34610164-34610183 None:intergenic 40.0%
!! AATCAGGTTTAGGAGTGTTG+CGG + chr4_3:34610249-34610268 None:intergenic 40.0%
AGAAGAAAGAAGTTGCTTGG+CGG + chr4_3:34610329-34610348 None:intergenic 40.0%
GAGAGAAGAAAGAAGTTGCT+TGG + chr4_3:34610332-34610351 None:intergenic 40.0%
!! AGAAACGAACGTGTCACTTA+TGG + chr4_3:34610362-34610381 None:intergenic 40.0%
TGTGATGAGGTTTCTGTTGT+TGG - chr4_3:34611428-34611447 Msa0638980:CDS 40.0%
GTGATGAGGTTTCTGTTGTT+GGG - chr4_3:34611429-34611448 Msa0638980:CDS 40.0%
TGATGAGGTTTCTGTTGTTG+GGG - chr4_3:34611430-34611449 Msa0638980:CDS 40.0%
! TTGTGTTGGCAAGACTGTTA+TGG - chr4_3:34611575-34611594 Msa0638980:intron 40.0%
!! GATGAATTCTCTTTTGGGTG+AGG - chr4_3:34611597-34611616 Msa0638980:intron 40.0%
!! TTGTTGATTTCGCCATTGGT+GGG - chr4_3:34611810-34611829 Msa0638980:intron 40.0%
! ACATTCCTGGAAGAGCTTTT+TGG - chr4_3:34612066-34612085 Msa0638980:intron 40.0%
CGTAATAGTTTCATGATCCC+AGG - chr4_3:34612354-34612373 Msa0638980:intron 40.0%
ACAATGACAGACTAAGACCT+GGG + chr4_3:34612374-34612393 None:intergenic 40.0%
AGAATTCCAGCATCACTTTG+TGG - chr4_3:34612591-34612610 Msa0638980:intron 40.0%
!!! TTTGGTTTTAGACCATCCCA+CGG - chr4_3:34612618-34612637 Msa0638980:intron 40.0%
TGCATTTGGAAGAACTCCAA+TGG + chr4_3:34612655-34612674 None:intergenic 40.0%
! GTCTCTAAGCTTTGTGCATT+TGG + chr4_3:34612669-34612688 None:intergenic 40.0%
TTACACATAGTGAGGTGAAC+GGG - chr4_3:34612864-34612883 Msa0638980:intron 40.0%
CAGTGGATACCAAAAAGTCA+AGG - chr4_3:34613028-34613047 Msa0638980:intron 40.0%
! TCTAAGGCTTCATGAGCAAT+CGG - chr4_3:34613366-34613385 Msa0638980:CDS 40.0%
! TGAAAGCATAACCGAAGAGA+GGG + chr4_3:34613425-34613444 None:intergenic 40.0%
! TTGAAAGCATAACCGAAGAG+AGG + chr4_3:34613426-34613445 None:intergenic 40.0%
CAAGGTAGTAAGGATGAAAG+AGG - chr4_3:34613504-34613523 Msa0638980:intron 40.0%
ATCAAAGTCCTGGCATGATT+GGG - chr4_3:34613595-34613614 Msa0638980:intron 40.0%
AGAGTCTCACTCCATTATAC+TGG - chr4_3:34613815-34613834 Msa0638980:intron 40.0%
CTCACACAAGTGCTTACAAT+AGG - chr4_3:34613848-34613867 Msa0638980:intron 40.0%
AATTGTTCAGTTGCTGTGGT+CGG - chr4_3:34613891-34613910 Msa0638980:intron 40.0%
CTGACTGCAAAAATAGCTCA+TGG - chr4_3:34614249-34614268 Msa0638980:intron 40.0%
GACTGCAAAAATAGCTCATG+GGG - chr4_3:34614251-34614270 Msa0638980:intron 40.0%
ATCCCTATCTCTAAACAACG+TGG - chr4_3:34614324-34614343 Msa0638980:intron 40.0%
TCCCTATCTCTAAACAACGT+GGG - chr4_3:34614325-34614344 Msa0638980:intron 40.0%
TCCCACGTTGTTTAGAGATA+GGG + chr4_3:34614329-34614348 None:intergenic 40.0%
ATCCCACGTTGTTTAGAGAT+AGG + chr4_3:34614330-34614349 None:intergenic 40.0%
! CACCTTTTGATGTCCATGTT+TGG - chr4_3:34614357-34614376 Msa0638980:CDS 40.0%
CTCCAAACATGGACATCAAA+AGG + chr4_3:34614362-34614381 None:intergenic 40.0%
ATGGTATCAGGGTCTATTCT+AGG + chr4_3:34614424-34614443 None:intergenic 40.0%
!! CCACATTCTAAGATGGTATC+AGG + chr4_3:34614436-34614455 None:intergenic 40.0%
CCTGATACCATCTTAGAATG+TGG - chr4_3:34614433-34614452 Msa0638980:CDS 40.0%
! CCTTTAGCTAACTTTTAGGC+TGG + chr4_3:34614460-34614479 None:intergenic 40.0%
CCAGCCTAAAAGTTAGCTAA+AGG - chr4_3:34614457-34614476 Msa0638980:CDS 40.0%
! GACTGTCTAAAGCCTTGTAA+GGG - chr4_3:34614486-34614505 Msa0638980:CDS 40.0%
!! AGCCTTGTAAGGGCTATTTT+TGG - chr4_3:34614496-34614515 Msa0638980:CDS 40.0%
!!! GCCTTGTAAGGGCTATTTTT+GGG - chr4_3:34614497-34614516 Msa0638980:CDS 40.0%
TCCCAAAAATAGCCCTTACA+AGG + chr4_3:34614501-34614520 None:intergenic 40.0%
GAAAAGAAAGTTTAGGCCAC+TGG + chr4_3:34614645-34614664 None:intergenic 40.0%
GTGAATCCCATATATCACTG+GGG - chr4_3:34614691-34614710 Msa0638980:intron 40.0%
AAACATGTTTGGGCACAACA+CGG + chr4_3:34614981-34615000 None:intergenic 40.0%
CTCATGCCTGACTTTATACA+AGG + chr4_3:34615040-34615059 None:intergenic 40.0%
CTTTGACAGACAAGAAACGA+TGG + chr4_3:34615110-34615129 None:intergenic 40.0%
TGGAGGAGTCAAGTTAAAAG+AGG - chr4_3:34615461-34615480 Msa0638980:intron 40.0%
CCTGTTGGACAATCAAAACA+AGG + chr4_3:34615679-34615698 None:intergenic 40.0%
!!! CCTTGTTTTGATTGTCCAAC+AGG - chr4_3:34615676-34615695 Msa0638980:intron 40.0%
!!! GTTTTGATTGTCCAACAGGA+TGG - chr4_3:34615680-34615699 Msa0638980:intron 40.0%
TAGTATGTCTGGTTGTTGTC+AGG - chr4_3:34615811-34615830 Msa0638980:intron 40.0%
TTCCAGGTTACGATTCCTTT+AGG - chr4_3:34615934-34615953 Msa0638980:intron 40.0%
ATCCTAAAGGAATCGTAACC+TGG + chr4_3:34615939-34615958 None:intergenic 40.0%
TCATTCATCTCAAACCATGG+AGG - chr4_3:34615985-34616004 Msa0638980:intron 40.0%
GAAGAAATTTGTCACCTCCA+TGG + chr4_3:34616002-34616021 None:intergenic 40.0%
GTAAAGCCATGATGTGTAGT+TGG - chr4_3:34616208-34616227 Msa0638980:intron 40.0%
CAGAATCCAACTACACATCA+TGG + chr4_3:34616217-34616236 None:intergenic 40.0%
TGTAGTTGGATTCTGCTTGA+TGG - chr4_3:34616222-34616241 Msa0638980:intron 40.0%
GTAGTTGGATTCTGCTTGAT+GGG - chr4_3:34616223-34616242 Msa0638980:intron 40.0%
TAGTTGGATTCTGCTTGATG+GGG - chr4_3:34616224-34616243 Msa0638980:intron 40.0%
! ATTCTGCTTGATGGGGTTTT+AGG - chr4_3:34616231-34616250 Msa0638980:intron 40.0%
!!! TGGGGTTTTAGGCTTTGTTT+TGG - chr4_3:34616242-34616261 Msa0638980:intron 40.0%
!!! GCTTTGTTTTGGAGTTAGGA+GGG - chr4_3:34616253-34616272 Msa0638980:intron 40.0%
GAGTTAGGAGGGAAATGAAA+GGG - chr4_3:34616264-34616283 Msa0638980:intron 40.0%
TCATTTAAAGGGGAGAGAGA+GGG + chr4_3:34616519-34616538 None:intergenic 40.0%
ATCATTTAAAGGGGAGAGAG+AGG + chr4_3:34616520-34616539 None:intergenic 40.0%
AAAAGCTCGATAGCTTAGCT+TGG - chr4_3:34616676-34616695 Msa0638980:intron 40.0%
AAAGCTCGATAGCTTAGCTT+GGG - chr4_3:34616677-34616696 Msa0638980:intron 40.0%
GCAAACTGATGATCTGTTCA+TGG - chr4_3:34616956-34616975 Msa0638980:intron 40.0%
ATTCTGATATGCTGTTGCCT+AGG - chr4_3:34617035-34617054 Msa0638980:intron 40.0%
! ATCTATAGAAGTGCAGGTAC+AGG + chr4_3:34617179-34617198 None:intergenic 40.0%
! CACTGTATCTATAGAAGTGC+AGG + chr4_3:34617185-34617204 None:intergenic 40.0%
CTGCACTTCTATAGATACAG+TGG - chr4_3:34617183-34617202 Msa0638980:intron 40.0%
! TCTCTGAACTTTGGGAAGAA+TGG + chr4_3:34617216-34617235 None:intergenic 40.0%
ATTCTTCCCAAAGTTCAGAG+AGG - chr4_3:34617215-34617234 Msa0638980:intron 40.0%
GAAATCAGGAAAATGTGTGG+TGG + chr4_3:34617278-34617297 None:intergenic 40.0%
! GGATAGCTTATTGTTGGTCT+TGG - chr4_3:34617323-34617342 Msa0638980:intron 40.0%
TCAGAAGAGAGCTGAATTCA+AGG + chr4_3:34617362-34617381 None:intergenic 40.0%
!! CTTCTGAAATTCGCACTTGA+CGG - chr4_3:34617375-34617394 Msa0638980:intron 40.0%
!! TGATGCTACTTTCTTGAGAG+AGG - chr4_3:34617434-34617453 Msa0638980:intron 40.0%
TAAGGCAGTCACTCACTATA+CGG - chr4_3:34617929-34617948 Msa0638980:CDS 40.0%
CTTAAAGCTAGGATGGTATG+AGG - chr4_3:34618010-34618029 Msa0638980:intron 40.0%
AGAAGATGGGATTATGACAG+TGG - chr4_3:34618165-34618184 Msa0638980:intron 40.0%
AACCAACTGTTCTACGAATG+GGG - chr4_3:34618253-34618272 Msa0638980:intron 40.0%
!!! CTCTGTGTTATTTTGAGGTG+GGG + chr4_3:34618315-34618334 None:intergenic 40.0%
!!! GCTCTGTGTTATTTTGAGGT+GGG + chr4_3:34618316-34618335 None:intergenic 40.0%
!!! AGCTCTGTGTTATTTTGAGG+TGG + chr4_3:34618317-34618336 None:intergenic 40.0%
ACCTCAAAATAACACAGAGC+TGG - chr4_3:34618316-34618335 Msa0638980:intron 40.0%
ATATGCCTTCACATTCTGCA+TGG + chr4_3:34618551-34618570 None:intergenic 40.0%
CTGCTAGAGAATCACTACTT+CGG - chr4_3:34618584-34618603 Msa0638980:intron 40.0%
ATCACTACTTCGGTATAAGG+AGG - chr4_3:34618594-34618613 Msa0638980:intron 40.0%
!! ACACGCACACATACTAGTTT+TGG + chr4_3:34618719-34618738 None:intergenic 40.0%
TGTTCTTGAACCACAGAACA+AGG - chr4_3:34618999-34619018 Msa0638980:intron 40.0%
AGATTAGCATCCTTGTTCTG+TGG + chr4_3:34619012-34619031 None:intergenic 40.0%
! ATGCTAATCTTGCTGTGCAA+AGG - chr4_3:34619022-34619041 Msa0638980:intron 40.0%
! TGCTAATCTTGCTGTGCAAA+GGG - chr4_3:34619023-34619042 Msa0638980:intron 40.0%
! TTGATTTTCACTTGGAGGGA+GGG + chr4_3:34619092-34619111 None:intergenic 40.0%
!! ATTGATTTTCACTTGGAGGG+AGG + chr4_3:34619093-34619112 None:intergenic 40.0%
TGACTACACCTTCAGAATGA+AGG - chr4_3:34619163-34619182 Msa0638980:CDS 40.0%
! AAACCTCTGTTGATGAGTTG+CGG - chr4_3:34619209-34619228 Msa0638980:CDS 40.0%
CCGACGATTAACCAGAGTTT+GGG + chr4_3:34610169-34610188 None:intergenic 45.0%
CCCAAACTCTGGTTAATCGT+CGG - chr4_3:34610166-34610185 Msa0638980:three_prime_UTR 45.0%
TCCGACGATTAACCAGAGTT+TGG + chr4_3:34610170-34610189 None:intergenic 45.0%
CTCTGGTTAATCGTCGGAAT+TGG - chr4_3:34610172-34610191 Msa0638980:three_prime_UTR 45.0%
TTCAATGGGGCTACTTGTGT+TGG - chr4_3:34611561-34611580 Msa0638980:intron 45.0%
! GATGGCATCTGAGGATTAGT+TGG + chr4_3:34611737-34611756 None:intergenic 45.0%
!! GGACTTGTTGATTTCGCCAT+TGG - chr4_3:34611806-34611825 Msa0638980:intron 45.0%
!! CTTGTTGATTTCGCCATTGG+TGG - chr4_3:34611809-34611828 Msa0638980:intron 45.0%
TACAGCCAAAAAGCTCTTCC+AGG + chr4_3:34612074-34612093 None:intergenic 45.0%
! TGTCATTTCCCTCTACCACA+AGG + chr4_3:34612308-34612327 None:intergenic 45.0%
CACAATGACAGACTAAGACC+TGG + chr4_3:34612375-34612394 None:intergenic 45.0%
!!! TTGGTTTTAGACCATCCCAC+GGG - chr4_3:34612619-34612638 Msa0638980:intron 45.0%
AATGGTAGATATAGCCCCGT+GGG + chr4_3:34612637-34612656 None:intergenic 45.0%
GCACAAAGCTTAGAGACCAT+TGG - chr4_3:34612672-34612691 Msa0638980:intron 45.0%
AAGCATGTCCAACACGATGT+AGG + chr4_3:34612993-34613012 None:intergenic 45.0%
AGATCAGGCTCCAAAGCATA+TGG - chr4_3:34613309-34613328 Msa0638980:CDS 45.0%
!! CTAAAAAGGTGCCCAGTCTA+AGG - chr4_3:34613350-34613369 Msa0638980:CDS 45.0%
TGCTCATGAAGCCTTAGACT+GGG + chr4_3:34613364-34613383 None:intergenic 45.0%
TTGCTCATGAAGCCTTAGAC+TGG + chr4_3:34613365-34613384 None:intergenic 45.0%
CAATCATGCCAGGACTTTGA+TGG + chr4_3:34613596-34613615 None:intergenic 45.0%
CATCAAAGTCCTGGCATGAT+TGG - chr4_3:34613594-34613613 Msa0638980:intron 45.0%
AGTACTCTTCACTCAGCAAG+TGG + chr4_3:34613966-34613985 None:intergenic 45.0%
CAAAAATAGCTCATGGGGTG+AGG - chr4_3:34614256-34614275 Msa0638980:intron 45.0%
GATGTCCATGTTTGGAGATC+TGG - chr4_3:34614365-34614384 Msa0638980:CDS 45.0%
AAGCTCCAGATCTCCAAACA+TGG + chr4_3:34614373-34614392 None:intergenic 45.0%
! TCTGGAGCTTAGAGAAATGC+AGG - chr4_3:34614383-34614402 Msa0638980:CDS 45.0%
! GGACTGTCTAAAGCCTTGTA+AGG - chr4_3:34614485-34614504 Msa0638980:CDS 45.0%
AGGCATCCCCAGTGATATAT+GGG + chr4_3:34614700-34614719 None:intergenic 45.0%
GGGTTAAATCAGTCAAACGC+AGG - chr4_3:34614950-34614969 Msa0638980:intron 45.0%
ATATTGTCACTCTGGACTCC+AGG + chr4_3:34615262-34615281 None:intergenic 45.0%
AAAGAGGTAGAGGAAGACCT+AGG - chr4_3:34615477-34615496 Msa0638980:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr4_3:34615607-34615626 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr4_3:34615608-34615627 None:intergenic 45.0%
AAGGAGATAGTAGGGTAGCA+TGG + chr4_3:34615660-34615679 None:intergenic 45.0%
TTGATTGTCCAACAGGATGG+TGG - chr4_3:34615683-34615702 Msa0638980:intron 45.0%
TCCAGCATTGCTAGTATGTC+TGG - chr4_3:34615800-34615819 Msa0638980:intron 45.0%
ACCAGACATACTAGCAATGC+TGG + chr4_3:34615804-34615823 None:intergenic 45.0%
GTATACAGCTCTTCAAGAGC+AGG - chr4_3:34616041-34616060 Msa0638980:CDS 45.0%
!!! GGCTTTGTTTTGGAGTTAGG+AGG - chr4_3:34616252-34616271 Msa0638980:intron 45.0%
GGAGTTAGGAGGGAAATGAA+AGG - chr4_3:34616263-34616282 Msa0638980:intron 45.0%
TTAGGAGGGAAATGAAAGGG+TGG - chr4_3:34616267-34616286 Msa0638980:intron 45.0%
TAGGAGGGAAATGAAAGGGT+GGG - chr4_3:34616268-34616287 Msa0638980:intron 45.0%
! GAAATGAAAGGGTGGGCTTT+GGG - chr4_3:34616275-34616294 Msa0638980:intron 45.0%
! AAATGAAAGGGTGGGCTTTG+GGG - chr4_3:34616276-34616295 Msa0638980:intron 45.0%
AAGGAATGTGGAACGAGAAG+TGG - chr4_3:34616301-34616320 Msa0638980:CDS 45.0%
AATAAACCCCCCATGCAAAG+TGG + chr4_3:34616343-34616362 None:intergenic 45.0%
! ACGTATTGCGAGAGGGTTTT+TGG - chr4_3:34616406-34616425 Msa0638980:CDS 45.0%
!! TATTGCGAGAGGGTTTTTGG+AGG - chr4_3:34616409-34616428 Msa0638980:CDS 45.0%
!! ATTGCGAGAGGGTTTTTGGA+GGG - chr4_3:34616410-34616429 Msa0638980:CDS 45.0%
ATTTAAAGGGGAGAGAGAGG+GGG + chr4_3:34616517-34616536 None:intergenic 45.0%
CATTTAAAGGGGAGAGAGAG+GGG + chr4_3:34616518-34616537 None:intergenic 45.0%
AAAATGCTAACTAGTGCCCC+AGG - chr4_3:34616756-34616775 Msa0638980:CDS 45.0%
AAATGCTAACTAGTGCCCCA+GGG - chr4_3:34616757-34616776 Msa0638980:CDS 45.0%
GCTTTCCTTAACTAATGCCC+CGG - chr4_3:34616885-34616904 Msa0638980:intron 45.0%
!! GAGAAGGTATTCTGTGCAAC+AGG + chr4_3:34617074-34617093 None:intergenic 45.0%
ACGACACAAAGCGTAAGAGA+AGG + chr4_3:34617090-34617109 None:intergenic 45.0%
GTGGGTAAGTGTGAGAAATC+AGG + chr4_3:34617292-34617311 None:intergenic 45.0%
!! ACTTACCCACCGATTCTGTA+TGG - chr4_3:34617302-34617321 Msa0638980:intron 45.0%
GCTATCCATACAGAATCGGT+GGG + chr4_3:34617310-34617329 None:intergenic 45.0%
AGCTATCCATACAGAATCGG+TGG + chr4_3:34617311-34617330 None:intergenic 45.0%
AGTCCGCTTGAAGACTCAAA+GGG + chr4_3:34617540-34617559 None:intergenic 45.0%
AAGTCCGCTTGAAGACTCAA+AGG + chr4_3:34617541-34617560 None:intergenic 45.0%
CTTTGAGTGGGCATCAACAA+TGG + chr4_3:34617577-34617596 None:intergenic 45.0%
ATGCCCACTCAAAGTACACT+TGG - chr4_3:34617583-34617602 Msa0638980:intron 45.0%
! AGGATGTCCGGACAGTTTTT+GGG + chr4_3:34617780-34617799 None:intergenic 45.0%
! AAGGATGTCCGGACAGTTTT+TGG + chr4_3:34617781-34617800 None:intergenic 45.0%
AAGGCAGTCACTCACTATAC+GGG - chr4_3:34617930-34617949 Msa0638980:CDS 45.0%
ACGGGGGCTATTGAATTGAA+TGG - chr4_3:34617948-34617967 Msa0638980:CDS 45.0%
CGGGGGCTATTGAATTGAAT+GGG - chr4_3:34617949-34617968 Msa0638980:CDS 45.0%
CTGCTTGCTTAAAGCTAGGA+TGG - chr4_3:34618003-34618022 Msa0638980:intron 45.0%
TGTGAGGATACTTGACAGAC+AGG + chr4_3:34618041-34618060 None:intergenic 45.0%
GAACGGCAATCACAGGAAAA+TGG + chr4_3:34618070-34618089 None:intergenic 45.0%
CTTATGCAGCTTTCAGCTAG+CGG - chr4_3:34618101-34618120 Msa0638980:intron 45.0%
!!! TGTTATTTTGAGGTGGGGAG+GGG + chr4_3:34618310-34618329 None:intergenic 45.0%
!!! GTGTTATTTTGAGGTGGGGA+GGG + chr4_3:34618311-34618330 None:intergenic 45.0%
!!! TGTGTTATTTTGAGGTGGGG+AGG + chr4_3:34618312-34618331 None:intergenic 45.0%
!!! GCCAGCTCTGTGTTATTTTG+AGG + chr4_3:34618320-34618339 None:intergenic 45.0%
CAATGAGCTTCACTACGCTA+CGG + chr4_3:34618835-34618854 None:intergenic 45.0%
CAGCTTCAGTGATTGCGACA+TGG + chr4_3:34610125-34610144 None:intergenic 50.0%
ACGCTTCCAATCCCAAACTC+TGG - chr4_3:34610155-34610174 Msa0638980:three_prime_UTR 50.0%
TGACGTGAAGGGCTATGTGA+CGG - chr4_3:34611464-34611483 Msa0638980:CDS 50.0%
TGACCGCTCTGCTCTTCAAT+GGG - chr4_3:34611547-34611566 Msa0638980:intron 50.0%
TTCAGCAGTAGCAGTTGCTG+CGG - chr4_3:34611784-34611803 Msa0638980:intron 50.0%
CAGCTATTGAGGCCACAACA+TGG + chr4_3:34612486-34612505 None:intergenic 50.0%
!!! TGGTTTTAGACCATCCCACG+GGG - chr4_3:34612620-34612639 Msa0638980:intron 50.0%
CAATGGTAGATATAGCCCCG+TGG + chr4_3:34612638-34612657 None:intergenic 50.0%
CACGGGGCTATATCTACCAT+TGG - chr4_3:34612636-34612655 Msa0638980:intron 50.0%
ATGTAGGACAGATGGATCGC+GGG + chr4_3:34612977-34612996 None:intergenic 50.0%
GATGTAGGACAGATGGATCG+CGG + chr4_3:34612978-34612997 None:intergenic 50.0%
CCAACACGATGTAGGACAGA+TGG + chr4_3:34612985-34613004 None:intergenic 50.0%
CCATCTGTCCTACATCGTGT+TGG - chr4_3:34612982-34613001 Msa0638980:intron 50.0%
CAATCGGCACCCCAACAAAA+TGG - chr4_3:34613382-34613401 Msa0638980:CDS 50.0%
ACCTGATGCCATCAAAGTCC+TGG - chr4_3:34613585-34613604 Msa0638980:intron 50.0%
TTCCTAGACCCAATCATGCC+AGG + chr4_3:34613606-34613625 None:intergenic 50.0%
GGCATGATTGGGTCTAGGAA+AGG - chr4_3:34613606-34613625 Msa0638980:intron 50.0%
TTCACTCAGCAAGTGGTGGT+GGG + chr4_3:34613959-34613978 None:intergenic 50.0%
ACTCTTCACTCAGCAAGTGG+TGG + chr4_3:34613963-34613982 None:intergenic 50.0%
GGAGCTTAGAGAAATGCAGG+TGG - chr4_3:34614386-34614405 Msa0638980:CDS 50.0%
! GGCTGGTCCACATTCTAAGA+TGG + chr4_3:34614443-34614462 None:intergenic 50.0%
CAGGCATCCCCAGTGATATA+TGG + chr4_3:34614701-34614720 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr4_3:34615603-34615622 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr4_3:34615609-34615628 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr4_3:34615606-34615625 Msa0638980:intron 50.0%
!! AGTGGACTGTCTGCTACAGA+GGG + chr4_3:34615722-34615741 None:intergenic 50.0%
!! TAGTGGACTGTCTGCTACAG+AGG + chr4_3:34615723-34615742 None:intergenic 50.0%
! GGAAATGAAAGGGTGGGCTT+TGG - chr4_3:34616274-34616293 Msa0638980:intron 50.0%
!! GGCTTTGGGGAAAAGGAATG+TGG - chr4_3:34616289-34616308 Msa0638980:intron 50.0%
!! AGAGGGTTTTTGGAGGGCTT+AGG - chr4_3:34616416-34616435 Msa0638980:CDS 50.0%
TTTAAAGGGGAGAGAGAGGG+GGG + chr4_3:34616516-34616535 None:intergenic 50.0%
AATGCTAACTAGTGCCCCAG+GGG - chr4_3:34616758-34616777 Msa0638980:CDS 50.0%
TCTCCTTAACTAGTGCCCCT+GGG + chr4_3:34616776-34616795 None:intergenic 50.0%
TTCCTTAACTAATGCCCCGG+AGG - chr4_3:34616888-34616907 Msa0638980:intron 50.0%
TCATGCTAACTAGTGCCTCC+GGG + chr4_3:34616906-34616925 None:intergenic 50.0%
GTCATGCTAACTAGTGCCTC+CGG + chr4_3:34616907-34616926 None:intergenic 50.0%
CAGGTTGCATAGTCTGACCT+AGG + chr4_3:34617055-34617074 None:intergenic 50.0%
TCCGCTTGAAGACTCAAAGG+GGG + chr4_3:34617538-34617557 None:intergenic 50.0%
GTCCGCTTGAAGACTCAAAG+GGG + chr4_3:34617539-34617558 None:intergenic 50.0%
!!! GACAGTTTTTGGGTTCCTCG+TGG + chr4_3:34617770-34617789 None:intergenic 50.0%
CGAGGAACCCAAAAACTGTC+CGG - chr4_3:34617770-34617789 Msa0638980:intron 50.0%
AGGCAGTCACTCACTATACG+GGG - chr4_3:34617931-34617950 Msa0638980:CDS 50.0%
! GCTTTAAGCAAGCAGCTGCT+CGG + chr4_3:34617998-34618017 None:intergenic 50.0%
GCAGCTGCTTGCTTAAAGCT+AGG - chr4_3:34617999-34618018 Msa0638980:intron 50.0%
AGCGGAAGAAGACTGCAGTA+AGG - chr4_3:34618119-34618138 Msa0638980:intron 50.0%
TGGGATTATGACAGTGGCCA+TGG - chr4_3:34618171-34618190 Msa0638980:intron 50.0%
GACCCCATTCGTAGAACAGT+TGG + chr4_3:34618258-34618277 None:intergenic 50.0%
CGCACTATTCTCAGTACAGC+TGG + chr4_3:34618522-34618541 None:intergenic 50.0%
! GTGAAGGCATATCTGAGACG+TGG - chr4_3:34618559-34618578 Msa0638980:intron 50.0%
CGGTATAAGGAGGCTCTTGA+AGG - chr4_3:34618604-34618623 Msa0638980:intron 50.0%
! TTTTCACTTGGAGGGAGGGA+GGG + chr4_3:34619088-34619107 None:intergenic 50.0%
! ATTTTCACTTGGAGGGAGGG+AGG + chr4_3:34619089-34619108 None:intergenic 50.0%
ATGCCGCAACTCATCAACAG+AGG + chr4_3:34619215-34619234 None:intergenic 50.0%
ATCGTCGGAATTGGACTCGC+CGG - chr4_3:34610181-34610200 Msa0638980:three_prime_UTR 55.0%
TGTTGCGGCAGCGTCTTCTA+CGG + chr4_3:34610234-34610253 None:intergenic 55.0%
GAAAGAAGTTGCTTGGCGGC+AGG + chr4_3:34610325-34610344 None:intergenic 55.0%
GACGTGAAGGGCTATGTGAC+GGG - chr4_3:34611465-34611484 Msa0638980:CDS 55.0%
ACGTGAAGGGCTATGTGACG+GGG - chr4_3:34611466-34611485 Msa0638980:CDS 55.0%
! AAGGGCTATGTGACGGGGTT+TGG - chr4_3:34611471-34611490 Msa0638980:CDS 55.0%
CGGGGTTTGGAAATCCTGTG+TGG - chr4_3:34611484-34611503 Msa0638980:CDS 55.0%
TCGTGCGTTCTCTTCCACAC+AGG + chr4_3:34611501-34611520 None:intergenic 55.0%
TGTGTGGAAGAGAACGCACG+AGG - chr4_3:34611500-34611519 Msa0638980:CDS 55.0%
GTGACCGCTCTGCTCTTCAA+TGG - chr4_3:34611546-34611565 Msa0638980:intron 55.0%
GACCGCTCTGCTCTTCAATG+GGG - chr4_3:34611548-34611567 Msa0638980:intron 55.0%
AGCCCCATTGAAGAGCAGAG+CGG + chr4_3:34611553-34611572 None:intergenic 55.0%
TCAGATGCCATCGTGTGTCC+CGG - chr4_3:34611745-34611764 Msa0638980:intron 55.0%
AACCACTAGAAGACCCTCCC+GGG + chr4_3:34611766-34611785 None:intergenic 55.0%
GAACCACTAGAAGACCCTCC+CGG + chr4_3:34611767-34611786 None:intergenic 55.0%
TCAGCAGTAGCAGTTGCTGC+GGG - chr4_3:34611785-34611804 Msa0638980:intron 55.0%
!! TCGCCATTGGTGGGTTTGCA+TGG - chr4_3:34611819-34611838 Msa0638980:intron 55.0%
GTGCCATGCAAACCCACCAA+TGG + chr4_3:34611825-34611844 None:intergenic 55.0%
GTAGATATAGCCCCGTGGGA+TGG + chr4_3:34612633-34612652 None:intergenic 55.0%
! GCCAGGACTTTGATGGCATC+AGG + chr4_3:34613589-34613608 None:intergenic 55.0%
GTCCTGGCATGATTGGGTCT+AGG - chr4_3:34613601-34613620 Msa0638980:intron 55.0%
! TCACTCAGCAAGTGGTGGTG+GGG + chr4_3:34613958-34613977 None:intergenic 55.0%
CTTCACTCAGCAAGTGGTGG+TGG + chr4_3:34613960-34613979 None:intergenic 55.0%
ATAGCTCATGGGGTGAGGAC+TGG - chr4_3:34614261-34614280 Msa0638980:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr4_3:34615595-34615614 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr4_3:34615594-34615613 Msa0638980:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr4_3:34615595-34615614 Msa0638980:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr4_3:34615601-34615620 Msa0638980:intron 55.0%
! CTTCAAGAGCAGGCTAGCTC+TGG - chr4_3:34616051-34616070 Msa0638980:CDS 55.0%
!! AAGGGTGGGCTTTGGGGAAA+AGG - chr4_3:34616282-34616301 Msa0638980:intron 55.0%
CTCCTTAACTAGTGCCCCTG+GGG + chr4_3:34616775-34616794 None:intergenic 55.0%
GTCTCCTTAACTAGTGCCCC+TGG + chr4_3:34616777-34616796 None:intergenic 55.0%
! TGCCTCCGGGGCATTAGTTA+AGG + chr4_3:34616893-34616912 None:intergenic 55.0%
CATGCTAACTAGTGCCTCCG+GGG + chr4_3:34616905-34616924 None:intergenic 55.0%
AGTGCAGGTACAGGAGCGAT+TGG + chr4_3:34617170-34617189 None:intergenic 55.0%
GCCCCCTTTGAGTCTTCAAG+CGG - chr4_3:34617534-34617553 Msa0638980:intron 55.0%
GGCAGTCACTCACTATACGG+GGG - chr4_3:34617932-34617951 Msa0638980:CDS 55.0%
CAGGTGAGAACGGCAATCAC+AGG + chr4_3:34618077-34618096 None:intergenic 55.0%
GCGTCTTCTACGGCGAGTCT+CGG + chr4_3:34610224-34610243 None:intergenic 60.0%
GGAGGAGGAGGCTGAGGAAA+GGG + chr4_3:34610304-34610323 None:intergenic 60.0%
AGGAGGAGGAGGCTGAGGAA+AGG + chr4_3:34610305-34610324 None:intergenic 60.0%
AGAAGTTGCTTGGCGGCAGG+AGG + chr4_3:34610322-34610341 None:intergenic 60.0%
GTGGAAGAGAACGCACGAGG+AGG - chr4_3:34611503-34611522 Msa0638980:CDS 60.0%
GAAGAGAACGCACGAGGAGG+CGG - chr4_3:34611506-34611525 Msa0638980:CDS 60.0%
GGGACACACGATGGCATCTG+AGG + chr4_3:34611746-34611765 None:intergenic 60.0%
CAGATGCCATCGTGTGTCCC+GGG - chr4_3:34611746-34611765 Msa0638980:intron 60.0%
!! ACTCAGCAAGTGGTGGTGGG+GGG + chr4_3:34613956-34613975 None:intergenic 60.0%
!! CACTCAGCAAGTGGTGGTGG+GGG + chr4_3:34613957-34613976 None:intergenic 60.0%
TGACCGCGCTCCACTTTGCA+TGG - chr4_3:34616330-34616349 Msa0638980:CDS 60.0%
GACCGCGCTCCACTTTGCAT+GGG - chr4_3:34616331-34616350 Msa0638980:CDS 60.0%
ACCGCGCTCCACTTTGCATG+GGG - chr4_3:34616332-34616351 Msa0638980:CDS 60.0%
!! TGCCCCAGGGGCACTAGTTA+AGG - chr4_3:34616770-34616789 Msa0638980:CDS 60.0%
GTCGGAATTGGACTCGCCGG+CGG - chr4_3:34610184-34610203 Msa0638980:three_prime_UTR 65.0%
TCGGAATTGGACTCGCCGGC+GGG - chr4_3:34610185-34610204 Msa0638980:three_prime_UTR 65.0%
GGAGAGAACGACGATCCCGC+CGG + chr4_3:34610203-34610222 None:intergenic 65.0%
AGTTGCTTGGCGGCAGGAGG+AGG + chr4_3:34610319-34610338 None:intergenic 65.0%
GGAGGCGGAGAAGACTGCGA+TGG - chr4_3:34611521-34611540 Msa0638980:CDS 65.0%
GGCGGAGAAGACTGCGATGG+TGG - chr4_3:34611524-34611543 Msa0638980:CDS 65.0%
ATGCCATCGTGTGTCCCGGG+AGG - chr4_3:34611749-34611768 Msa0638980:intron 65.0%
TGCCATCGTGTGTCCCGGGA+GGG - chr4_3:34611750-34611769 Msa0638980:intron 65.0%
GTCCCGGGAGGGTCTTCTAG+TGG - chr4_3:34611761-34611780 Msa0638980:intron 65.0%
TCACTGGGGATGCCTGTGCC+TGG - chr4_3:34614705-34614724 Msa0638980:intron 65.0%
CCCCCATGCAAAGTGGAGCG+CGG + chr4_3:34616336-34616355 None:intergenic 65.0%
CCGCGCTCCACTTTGCATGG+GGG - chr4_3:34616333-34616352 Msa0638980:CDS 65.0%
CGCGCTCCACTTTGCATGGG+GGG - chr4_3:34616334-34616353 Msa0638980:CDS 65.0%
AAGGGGAGAGAGAGGGGGGT+GGG + chr4_3:34616512-34616531 None:intergenic 65.0%
AAAGGGGAGAGAGAGGGGGG+TGG + chr4_3:34616513-34616532 None:intergenic 65.0%
CACTTGGAGGGAGGGAGGGA+GGG + chr4_3:34619084-34619103 None:intergenic 65.0%
TCACTTGGAGGGAGGGAGGG+AGG + chr4_3:34619085-34619104 None:intergenic 65.0%
TGCTTGGCGGCAGGAGGAGG+AGG + chr4_3:34610316-34610335 None:intergenic 70.0%
GACCCTCCCGGGACACACGA+TGG + chr4_3:34611755-34611774 None:intergenic 70.0%
AGGGGAGAGAGAGGGGGGTG+GGG + chr4_3:34616511-34616530 None:intergenic 70.0%
TGGAGGGAGGGAGGGAGGGA+GGG + chr4_3:34619080-34619099 None:intergenic 70.0%
TTGGAGGGAGGGAGGGAGGG+AGG + chr4_3:34619081-34619100 None:intergenic 70.0%
GCGGCAGGAGGAGGAGGCTG+AGG + chr4_3:34610310-34610329 None:intergenic 75.0%
GGAGAGAGAGGGGGGTGGGG+AGG + chr4_3:34616508-34616527 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 34610011 34619433 34610011 ID=Msa0638980;Name=Msa0638980
chr4_3 mRNA 34610011 34619433 34610011 ID=Msa0638980-mRNA-1;Parent=Msa0638980;Name=Msa0638980-mRNA-1;_AED=0.04;_eAED=0.04;_QI=113|1|1|1|1|1|13|368|604
chr4_3 exon 34610011 34610461 34610011 ID=Msa0638980-mRNA-1:exon:8057;Parent=Msa0638980-mRNA-1
chr4_3 exon 34610819 34610888 34610819 ID=Msa0638980-mRNA-1:exon:8056;Parent=Msa0638980-mRNA-1
chr4_3 exon 34611283 34611334 34611283 ID=Msa0638980-mRNA-1:exon:8055;Parent=Msa0638980-mRNA-1
chr4_3 exon 34611420 34611547 34611420 ID=Msa0638980-mRNA-1:exon:8054;Parent=Msa0638980-mRNA-1
chr4_3 exon 34613304 34613504 34613304 ID=Msa0638980-mRNA-1:exon:8053;Parent=Msa0638980-mRNA-1
chr4_3 exon 34613612 34613746 34613612 ID=Msa0638980-mRNA-1:exon:8052;Parent=Msa0638980-mRNA-1
chr4_3 exon 34614355 34614523 34614355 ID=Msa0638980-mRNA-1:exon:8051;Parent=Msa0638980-mRNA-1
chr4_3 exon 34615992 34616133 34615992 ID=Msa0638980-mRNA-1:exon:8050;Parent=Msa0638980-mRNA-1
chr4_3 exon 34616297 34616479 34616297 ID=Msa0638980-mRNA-1:exon:8049;Parent=Msa0638980-mRNA-1
chr4_3 exon 34616751 34616876 34616751 ID=Msa0638980-mRNA-1:exon:8048;Parent=Msa0638980-mRNA-1
chr4_3 exon 34617617 34617741 34617617 ID=Msa0638980-mRNA-1:exon:8047;Parent=Msa0638980-mRNA-1
chr4_3 exon 34617831 34617983 34617831 ID=Msa0638980-mRNA-1:exon:8046;Parent=Msa0638980-mRNA-1
chr4_3 exon 34619073 34619433 34619073 ID=Msa0638980-mRNA-1:exon:8045;Parent=Msa0638980-mRNA-1
chr4_3 five_prime_UTR 34619321 34619433 34619321 ID=Msa0638980-mRNA-1:five_prime_utr;Parent=Msa0638980-mRNA-1
chr4_3 CDS 34619073 34619320 34619073 ID=Msa0638980-mRNA-1:cds;Parent=Msa0638980-mRNA-1
chr4_3 CDS 34617831 34617983 34617831 ID=Msa0638980-mRNA-1:cds;Parent=Msa0638980-mRNA-1
chr4_3 CDS 34617617 34617741 34617617 ID=Msa0638980-mRNA-1:cds;Parent=Msa0638980-mRNA-1
chr4_3 CDS 34616751 34616876 34616751 ID=Msa0638980-mRNA-1:cds;Parent=Msa0638980-mRNA-1
chr4_3 CDS 34616297 34616479 34616297 ID=Msa0638980-mRNA-1:cds;Parent=Msa0638980-mRNA-1
chr4_3 CDS 34615992 34616133 34615992 ID=Msa0638980-mRNA-1:cds;Parent=Msa0638980-mRNA-1
chr4_3 CDS 34614355 34614523 34614355 ID=Msa0638980-mRNA-1:cds;Parent=Msa0638980-mRNA-1
chr4_3 CDS 34613612 34613746 34613612 ID=Msa0638980-mRNA-1:cds;Parent=Msa0638980-mRNA-1
chr4_3 CDS 34613304 34613504 34613304 ID=Msa0638980-mRNA-1:cds;Parent=Msa0638980-mRNA-1
chr4_3 CDS 34611420 34611547 34611420 ID=Msa0638980-mRNA-1:cds;Parent=Msa0638980-mRNA-1
chr4_3 CDS 34611283 34611334 34611283 ID=Msa0638980-mRNA-1:cds;Parent=Msa0638980-mRNA-1
chr4_3 CDS 34610819 34610888 34610819 ID=Msa0638980-mRNA-1:cds;Parent=Msa0638980-mRNA-1
chr4_3 CDS 34610379 34610461 34610379 ID=Msa0638980-mRNA-1:cds;Parent=Msa0638980-mRNA-1
chr4_3 three_prime_UTR 34610011 34610378 34610011 ID=Msa0638980-mRNA-1:three_prime_utr;Parent=Msa0638980-mRNA-1
Gene Sequence

>Msa0638980

ATGTCGCAATCACTGAAGCTGATTAAGGATCACGCTTCCAATCCCAAACTCTGGTTAATCGTCGGAATTGGACTCGCCGGCGGGATCGTCGTTCTCTCCGAGACTCGCCGTAGAAGACGCTGCCGCAACACTCCTAAACCTGATTTTGGTGCTTTTATTGAACGCTTTGAGCTTCTTCCCTTTCCTCAGCCTCCTCCTCCTGCCGCCAAGCAACTTCTTTCTTCTCTCACTTTTGCCATAAGTGACACATTTGACGTGAAGGGCTATGTGACGGGGTTTGGAAATCCTGTGTGGAAGAGAACGCACGAGGAGGCGGAGAAGACTGCGATGGTGGTGACCGCTCTGCTCTTCAATGGGGCTACTTGTGTTGGCAAGACTGTTATGGATGAATTCTCTTTTGGATTTTCTGGTGAGAACAAGTATTATGGTACTCCAACTAATCCTCAGATGCCATCGTGTGTCCCGGGAGGGTCTTCTAGTGGTTCAGCAGTAGCAGTTGCTGCGGGACTTGTTGATTTCGCCATTGGTACTGATACTACAGGATGTGTGAGAATTCCAGCATCACTTTGTGGTATTTTTGGTTTTAGACCATCCCACGGGGCTATATCTACCATTGGAGTTCTTCCAAATGCACAAAGCTTAGAGACCATTGGATGGTTTGCCCGCGATCCATCTGTCCTACATCGTGTTGGACATGCTTTACTTCAATTGAATTCAGTGGATACCAAAAAGTCAAGGTGTATCATATTTGCTGATGATCTCTTTCAATCATCCAAAGATGCTACACAAAAGACAATATATGTCATTGGTAAAGCTATCGAGAATATGTCTGGATATCAGGCTCCAAAGCATATGGATCTTTGTGAGTATATTGCTAAAAAGGTGCCCAGTCTAAGGCTTCATGAGCAATCGGCACCCCAACAAAATGGAACATCTATATTGAAAACCCTCTCTTCGGTTATGCTTTCAATACAAAGATATGAATTTAAATCCAATTATGAAGAATGGGTTAAATCAGTCAAACGCAGGTTAAGCCGTGTTGTGCCCAAACATGTTTATGAAGCCATTAATACTACATACGATAATGTAAAAGCCTTGTATAAAGTCAGGCATGAGATGCATGCTGCATTTCAAAGTCTGTTAAAGGATGGTGGAATATTAGTTATTCCCTCTGTAGCAGACAGTCCACTAAAGCTTAATGCAAAGAAAGGTTTTTGCTCTGAGTTCCATGATAGAAGTTTTGCATTATCCAGCATTGCTAGTATGTCTGGTTGTTGTCAGGTTACGATTCCTTTAGGATATCATGATGATTGTTGTATTTCTGTTTCATTCATCTCAAACCATGGAGGTGACAAATTTCTTCTAGACACTATCTTGGATATGTATACAGCTCTTCAAGAGCAGGCTAGCTCTGGTTTCAATTCCATTCCATTACCAAACATCAATGGAAATACCGAACCTTCTGAACTTTTAAAGGAGAAGGGAAACGCGGCATTTAAAGAAAAGCAATGGGATAAGGCAGTCACTCACTATACGGGGGCTATTGAATTGAATGGGACGAATGCAACTTACTACTGCAACCGAGCAGCTGCTTGCTTAAAGCTAGGATGCTTTCAGCTAGCGGAAGAAGACTGCAGTAAGGCAATATTGCTTGATAAGAAGAATGTGAAGGCATATCTGAGACGTGGAACTGCTAGAGAATCACTACTTCGGTATAAGGAGGCTCTTGAAGATTTTAAGCATGCTCTTGTTCTTGAACCACAGAACAAGGATGCTAATCTTGCTGTGCAAAGGGTCAGAAAATTGACGAGTTGA
Protein sequence

>Msa0638980

MSQSLKLIKDHASNPKLWLIVGIGLAGGIVVLSETRRRRRCRNTPKPDFGAFIERFELLPFPQPPPPAAKQLLSSLTFAISDTFDVKGYVTGFGNPVWKRTHEEAEKTAMVVTALLFNGATCVGKTVMDEFSFGFSGENKYYGTPTNPQMPSCVPGGSSSGSAVAVAAGLVDFAIGTDTTGCVRIPASLCGIFGFRPSHGAISTIGVLPNAQSLETIGWFARDPSVLHRVGHALLQLNSVDTKKSRCIIFADDLFQSSKDATQKTIYVIGKAIENMSGYQAPKHMDLCEYIAKKVPSLRLHEQSAPQQNGTSILKTLSSVMLSIQRYEFKSNYEEWVKSVKRRLSRVVPKHVYEAINTTYDNVKALYKVRHEMHAAFQSLLKDGGILVIPSVADSPLKLNAKKGFCSEFHDRSFALSSIASMSGCCQVTIPLGYHDDCCISVSFISNHGGDKFLLDTILDMYTALQEQASSGFNSIPLPNINGNTEPSELLKEKGNAAFKEKQWDKAVTHYTGAIELNGTNATYYCNRAAACLKLGCFQLAEEDCSKAILLDKKNVKAYLRRGTARESLLRYKEALEDFKHALVLEPQNKDANLAVQRVRKLTS*