Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697560 | XP_013457182.1 | 96.360 | 577 | 21 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1161 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697560 | sp|F4KCL7|OE64M_ARATH | 63.085 | 577 | 209 | 4 | 1 | 575 | 1 | 575 | 0.0 | 730 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697560 | A0A072UQ78 | 96.360 | 577 | 21 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1161 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0638980 | Msa0697560 | 0.839289 | 1.731684e-57 | -8.615850e-47 |
| Msa0560330 | Msa0697560 | 0.897758 | 1.030040e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697560 | MtrunA17_Chr4g0050371 | 96.360 | 577 | 21 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1161 |
| Msa0697560 | MtrunA17_Chr8g0393041 | 51.045 | 574 | 274 | 3 | 5 | 577 | 1 | 568 | 1.46e-180 | 522 |
| Msa0697560 | MtrunA17_Chr1g0191741 | 47.518 | 423 | 214 | 3 | 48 | 467 | 6 | 423 | 1.14e-127 | 381 |
| Msa0697560 | MtrunA17_Chr2g0279961 | 39.333 | 150 | 90 | 1 | 72 | 221 | 195 | 343 | 7.56e-23 | 102 |
| Msa0697560 | MtrunA17_Chr3g0097231 | 46.809 | 94 | 50 | 0 | 484 | 577 | 7 | 100 | 1.05e-14 | 77.0 |
| Msa0697560 | MtrunA17_Chr8g0384851 | 40.000 | 150 | 89 | 1 | 72 | 221 | 202 | 350 | 1.73e-14 | 76.6 |
| Msa0697560 | MtrunA17_Chr8g0385461 | 31.126 | 151 | 97 | 3 | 73 | 222 | 226 | 370 | 5.40e-14 | 75.1 |
| Msa0697560 | MtrunA17_Chr1g0192811 | 45.349 | 86 | 46 | 1 | 492 | 577 | 95 | 179 | 9.51e-14 | 73.9 |
| Msa0697560 | MtrunA17_Chr3g0097801 | 41.406 | 128 | 75 | 0 | 119 | 246 | 151 | 278 | 1.16e-13 | 73.9 |
| Msa0697560 | MtrunA17_Chr3g0130801 | 37.333 | 150 | 92 | 1 | 72 | 221 | 266 | 413 | 1.92e-13 | 73.2 |
| Msa0697560 | MtrunA17_Chr8g0377651 | 38.710 | 124 | 70 | 2 | 107 | 225 | 138 | 260 | 3.23e-12 | 69.3 |
| Msa0697560 | MtrunA17_Chr8g0377641 | 34.694 | 147 | 87 | 4 | 107 | 248 | 135 | 277 | 7.43e-12 | 68.2 |
| Msa0697560 | MtrunA17_Chr8g0377681 | 34.752 | 141 | 83 | 3 | 107 | 242 | 135 | 271 | 1.17e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697560 | AT5G09420.1 | 63.085 | 577 | 209 | 4 | 1 | 575 | 1 | 575 | 0.0 | 730 |
| Msa0697560 | AT3G17970.1 | 51.667 | 540 | 260 | 1 | 39 | 577 | 24 | 563 | 2.12e-170 | 496 |
| Msa0697560 | AT3G17970.2 | 50.677 | 517 | 254 | 1 | 39 | 554 | 24 | 540 | 1.07e-159 | 468 |
| Msa0697560 | AT1G08980.1 | 46.394 | 416 | 215 | 3 | 48 | 458 | 6 | 418 | 9.27e-117 | 353 |
| Msa0697560 | AT5G64440.1 | 38.235 | 170 | 104 | 1 | 72 | 241 | 196 | 364 | 2.21e-22 | 101 |
| Msa0697560 | AT5G07360.1 | 30.876 | 217 | 134 | 6 | 73 | 280 | 268 | 477 | 2.63e-17 | 85.9 |
| Msa0697560 | AT5G07360.3 | 30.876 | 217 | 134 | 6 | 73 | 280 | 268 | 477 | 2.63e-17 | 85.9 |
| Msa0697560 | AT2G42810.2 | 41.837 | 98 | 57 | 0 | 480 | 577 | 5 | 102 | 2.33e-14 | 76.3 |
| Msa0697560 | AT2G42810.3 | 41.837 | 98 | 57 | 0 | 480 | 577 | 5 | 102 | 2.41e-14 | 76.3 |
| Msa0697560 | AT2G42810.1 | 41.837 | 98 | 57 | 0 | 480 | 577 | 5 | 102 | 2.57e-14 | 76.3 |
| Msa0697560 | AT2G42810.5 | 41.837 | 98 | 57 | 0 | 480 | 577 | 5 | 102 | 2.57e-14 | 76.3 |
| Msa0697560 | AT2G42810.4 | 41.837 | 98 | 57 | 0 | 480 | 577 | 5 | 102 | 2.57e-14 | 76.3 |
| Msa0697560 | AT3G25660.1 | 42.188 | 128 | 74 | 0 | 119 | 246 | 152 | 279 | 4.61e-14 | 75.5 |
| Msa0697560 | AT1G56440.2 | 46.512 | 86 | 45 | 1 | 492 | 577 | 78 | 162 | 1.07e-13 | 73.9 |
| Msa0697560 | AT1G56440.1 | 46.512 | 86 | 45 | 1 | 492 | 577 | 88 | 172 | 1.09e-13 | 73.9 |
| Msa0697560 | AT5G07360.2 | 28.571 | 217 | 132 | 7 | 73 | 280 | 268 | 470 | 5.11e-12 | 69.3 |
Find 145 sgRNAs with CRISPR-Local
Find 615 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAACCCATTCTTCATAAT+TGG | 0.173263 | 4_4:+67614774 | None:intergenic |
| GTTATGGATGAATTCTCTTT+TGG | 0.178620 | 4_4:-67618166 | Msa0697560:CDS |
| TGCATTTCAAAGTCTGTTAA+AGG | 0.191955 | 4_4:-67614641 | Msa0697560:intron |
| ATTATCGTATGTAGTATTAA+TGG | 0.214628 | 4_4:+67614702 | None:intergenic |
| AACACTCCTAAACCTGATTT+TGG | 0.219199 | 4_4:-67619512 | Msa0697560:CDS |
| TTGTGAGTATATTGCTAAAA+AGG | 0.228126 | 4_4:-67616385 | Msa0697560:CDS |
| TCAGAGAAAATGTGTGAAAT+TGG | 0.282501 | 4_4:+67619674 | None:intergenic |
| TTCTTTGCATTAAGCTTTAG+TGG | 0.296935 | 4_4:+67613972 | None:intergenic |
| TCTGGTGAGAACAAGTATTA+TGG | 0.298777 | 4_4:-67618050 | Msa0697560:CDS |
| AATGGCTTCATAAACATGTT+TGG | 0.301329 | 4_4:+67614720 | None:intergenic |
| AAGGGCTATGTGACGGGGTT+TGG | 0.313527 | 4_4:-67618286 | Msa0697560:CDS |
| AGAGTTGAGAAAGAATATTT+AGG | 0.315090 | 4_4:+67619745 | None:intergenic |
| GTGACCGCTCTGCTCTTCAA+TGG | 0.315280 | 4_4:-67618211 | Msa0697560:CDS |
| CAATCGGCACCCCAACAAAA+TGG | 0.333193 | 4_4:-67616339 | Msa0697560:CDS |
| TCCGACGATTAACCAGAGTT+TGG | 0.334376 | 4_4:+67619595 | None:intergenic |
| AGAAACGAACGTGTCACTTA+TGG | 0.335088 | 4_4:+67619403 | None:intergenic |
| GCAATCACTGAAGCTGATTA+AGG | 0.335684 | 4_4:-67619633 | Msa0697560:CDS |
| TGACCGCTCTGCTCTTCAAT+GGG | 0.338248 | 4_4:-67618210 | Msa0697560:CDS |
| TAAGGCAGTCACTCACTATA+CGG | 0.344676 | 4_4:-67611811 | Msa0697560:CDS |
| TTGTGTTGGCAAGACTGTTA+TGG | 0.346517 | 4_4:-67618182 | Msa0697560:CDS |
| TTCCAGGTTACGATTCCTTT+AGG | 0.348668 | 4_4:-67613775 | Msa0697560:intron |
| ATGGCTTCATAAACATGTTT+GGG | 0.355692 | 4_4:+67614721 | None:intergenic |
| CTCTGGTTAATCGTCGGAAT+TGG | 0.363824 | 4_4:-67619590 | Msa0697560:CDS |
| TCAATAAAAGCACCAAAATC+AGG | 0.365289 | 4_4:+67619500 | None:intergenic |
| AAAGCACCAAAATCAGGTTT+AGG | 0.377993 | 4_4:+67619506 | None:intergenic |
| AGAATCACTACTTCGGTATA+AGG | 0.382326 | 4_4:-67611149 | Msa0697560:CDS |
| TTAAATCCAATTATGAAGAA+TGG | 0.384162 | 4_4:-67614780 | Msa0697560:CDS |
| GTGTCTAAGCTTTGTGCATT+TGG | 0.384633 | 4_4:+67617056 | None:intergenic |
| TCCAGCATTGCTAGTATGTC+TGG | 0.392363 | 4_4:-67613909 | Msa0697560:CDS |
| ATTTCTTCTAGACACTATCT+TGG | 0.392742 | 4_4:-67613695 | Msa0697560:CDS |
| CCGACGATTAACCAGAGTTT+GGG | 0.396429 | 4_4:+67619596 | None:intergenic |
| GGCAATATTGCTTGATAAGA+AGG | 0.406807 | 4_4:-67611600 | Msa0697560:intron |
| CTTTAAAAGTTCAGAAGGTT+CGG | 0.418299 | 4_4:+67613597 | None:intergenic |
| TCGGTATTTCCATTGATGTT+TGG | 0.419040 | 4_4:+67613616 | None:intergenic |
| TTTCCATTGATGTTTGGTAA+TGG | 0.420732 | 4_4:+67613622 | None:intergenic |
| TAAATCCAATTATGAAGAAT+GGG | 0.421215 | 4_4:-67614779 | Msa0697560:CDS |
| GGACTTGTTGATTTCGCCAT+TGG | 0.422961 | 4_4:-67617951 | Msa0697560:intron |
| GGAGGAGGAGGCTGAGGAAA+GGG | 0.431169 | 4_4:+67619461 | None:intergenic |
| GACGTGAAGGGCTATGTGAC+GGG | 0.431364 | 4_4:-67618292 | Msa0697560:CDS |
| TTCAATGGGGCTACTTGTGT+TGG | 0.433681 | 4_4:-67618196 | Msa0697560:CDS |
| CTAAAGCTTAATGCAAAGAA+AGG | 0.434040 | 4_4:-67613969 | Msa0697560:CDS |
| TCACAAAGATCCATATGCTT+TGG | 0.436397 | 4_4:+67616402 | None:intergenic |
| CGGTATAAGGAGGCTCTTGA+AGG | 0.436879 | 4_4:-67611136 | Msa0697560:CDS |
| TGCTTGGCGGCAGGAGGAGG+AGG | 0.439066 | 4_4:+67619449 | None:intergenic |
| GCGGCAGGAGGAGGAGGCTG+AGG | 0.443794 | 4_4:+67619455 | None:intergenic |
| TAAAGAAAAGCAATGGGATA+AGG | 0.445790 | 4_4:-67611829 | Msa0697560:CDS |
| CTTCAAGAGCAGGCTAGCTC+TGG | 0.449151 | 4_4:-67613658 | Msa0697560:CDS |
| AGGAGGAGGAGGCTGAGGAA+AGG | 0.454392 | 4_4:+67619460 | None:intergenic |
| AGTTGCTTGGCGGCAGGAGG+AGG | 0.455403 | 4_4:+67619446 | None:intergenic |
| ATTCCATTACCAAACATCAA+TGG | 0.455429 | 4_4:-67613625 | Msa0697560:CDS |
| GATGGCATCTGAGGATTAGT+TGG | 0.461796 | 4_4:+67618023 | None:intergenic |
| TAGTATGTCTGGTTGTTGTC+AGG | 0.465310 | 4_4:-67613898 | Msa0697560:intron |
| TCAGATGCCATCGTGTGTCC+CGG | 0.468335 | 4_4:-67618012 | Msa0697560:CDS |
| TTGCTCATGAAGCCTTAGAC+TGG | 0.473607 | 4_4:+67616359 | None:intergenic |
| GTTTCATTCATCTCAAACCA+TGG | 0.474484 | 4_4:-67613727 | Msa0697560:CDS |
| AAAGCTATCGAGAATATGTC+TGG | 0.475596 | 4_4:-67616598 | Msa0697560:CDS |
| TAAAAGCCTTGTATAAAGTC+AGG | 0.480272 | 4_4:-67614678 | Msa0697560:CDS |
| TTCTCCTTTAAAAGTTCAGA+AGG | 0.483289 | 4_4:+67613592 | None:intergenic |
| ACCAGACATACTAGCAATGC+TGG | 0.484216 | 4_4:+67613908 | None:intergenic |
| CTCATGCCTGACTTTATACA+AGG | 0.486729 | 4_4:+67614672 | None:intergenic |
| GAAAGAAGTTGCTTGGCGGC+AGG | 0.487428 | 4_4:+67619440 | None:intergenic |
| CAAAAGACAATATATGTCAT+TGG | 0.487661 | 4_4:-67616622 | Msa0697560:CDS |
| ATAATGCAAAACTTCTATCA+TGG | 0.489308 | 4_4:+67613931 | None:intergenic |
| TATATTGAAAACCCTCTCTT+CGG | 0.493411 | 4_4:-67616310 | Msa0697560:CDS |
| GATTAACCAGAGTTTGGGAT+TGG | 0.495718 | 4_4:+67619601 | None:intergenic |
| GAAGAGAACGCACGAGGAGG+CGG | 0.498920 | 4_4:-67618251 | Msa0697560:CDS |
| AAAATACCACAAAGTGATGC+TGG | 0.501603 | 4_4:+67617125 | None:intergenic |
| AAGGCAGTCACTCACTATAC+GGG | 0.504378 | 4_4:-67611810 | Msa0697560:CDS |
| CTGCTTGCTTAAAGCTAGGA+TGG | 0.504647 | 4_4:-67611737 | Msa0697560:intron |
| CAGATGCCATCGTGTGTCCC+GGG | 0.504741 | 4_4:-67618011 | Msa0697560:CDS |
| AGAATTCCAGCATCACTTTG+TGG | 0.510332 | 4_4:-67617131 | Msa0697560:CDS |
| AGATCAGGCTCCAAAGCATA+TGG | 0.512614 | 4_4:-67616412 | Msa0697560:CDS |
| TAGTGGACTGTCTGCTACAG+AGG | 0.513302 | 4_4:+67613989 | None:intergenic |
| GGCATTTAAAGAAAAGCAAT+GGG | 0.514464 | 4_4:-67611835 | Msa0697560:CDS |
| ATTGATGTTTGGTAATGGAA+TGG | 0.516512 | 4_4:+67613627 | None:intergenic |
| TCTAAGGCTTCATGAGCAAT+CGG | 0.518298 | 4_4:-67616355 | Msa0697560:CDS |
| CGGTTATGCTTTCAATACAA+AGG | 0.519788 | 4_4:-67616290 | Msa0697560:intron |
| GTATACAGCTCTTCAAGAGC+AGG | 0.523402 | 4_4:-67613668 | Msa0697560:CDS |
| CAATCATCATGATATCCTAA+AGG | 0.531757 | 4_4:+67613760 | None:intergenic |
| GAGAGAAGAAAGAAGTTGCT+TGG | 0.532175 | 4_4:+67619433 | None:intergenic |
| TCGGAATTGGACTCGCCGGC+GGG | 0.532317 | 4_4:-67619577 | Msa0697560:CDS |
| TTGAAAGCATAACCGAAGAG+AGG | 0.536256 | 4_4:+67616298 | None:intergenic |
| GCTTTAAGCAAGCAGCTGCT+CGG | 0.536479 | 4_4:+67611745 | None:intergenic |
| GAACCACTAGAAGACCCTCC+CGG | 0.537525 | 4_4:+67617993 | None:intergenic |
| CGGCATTTAAAGAAAAGCAA+TGG | 0.537843 | 4_4:-67611836 | Msa0697560:CDS |
| GCGTCTTCTACGGCGAGTCT+CGG | 0.545847 | 4_4:+67619541 | None:intergenic |
| TCGTGCGTTCTCTTCCACAC+AGG | 0.546465 | 4_4:+67618259 | None:intergenic |
| GAAGAAATTTGTCACCTCCA+TGG | 0.547752 | 4_4:+67613710 | None:intergenic |
| TGTTGCGGCAGCGTCTTCTA+CGG | 0.549263 | 4_4:+67619531 | None:intergenic |
| GCAGCTGCTTGCTTAAAGCT+AGG | 0.551036 | 4_4:-67611741 | Msa0697560:CDS |
| GGCGGAGAAGACTGCGATGG+TGG | 0.555538 | 4_4:-67618233 | Msa0697560:CDS |
| TGCCATCGTGTGTCCCGGGA+GGG | 0.557956 | 4_4:-67618007 | Msa0697560:CDS |
| TGCTCATGAAGCCTTAGACT+GGG | 0.560156 | 4_4:+67616360 | None:intergenic |
| AACCACTAGAAGACCCTCCC+GGG | 0.562270 | 4_4:+67617994 | None:intergenic |
| AGCGGAAGAAGACTGCAGTA+AGG | 0.563929 | 4_4:-67611621 | Msa0697560:CDS |
| CACGGGGCTATATCTACCAT+TGG | 0.564058 | 4_4:-67617086 | Msa0697560:CDS |
| AGAAGTTGCTTGGCGGCAGG+AGG | 0.569345 | 4_4:+67619443 | None:intergenic |
| GCACAAAGCTTAGACACCAT+TGG | 0.570432 | 4_4:-67617050 | Msa0697560:intron |
| TCAGCAGTAGCAGTTGCTGC+GGG | 0.571901 | 4_4:-67617972 | Msa0697560:CDS |
| CCCAAACTCTGGTTAATCGT+CGG | 0.572628 | 4_4:-67619596 | Msa0697560:CDS |
| TTTACTTCAATTGAATTCAG+TGG | 0.572963 | 4_4:-67616710 | Msa0697560:CDS |
| TTCAGCAGTAGCAGTTGCTG+CGG | 0.578639 | 4_4:-67617973 | Msa0697560:CDS |
| CTTATGCAGCTTTCAGCTAG+CGG | 0.578821 | 4_4:-67611639 | Msa0697560:intron |
| ATCGTCGGAATTGGACTCGC+CGG | 0.579234 | 4_4:-67619581 | Msa0697560:CDS |
| GGGACACACGATGGCATCTG+AGG | 0.580420 | 4_4:+67618014 | None:intergenic |
| CCAACACGATGTAGGACAGA+TGG | 0.581742 | 4_4:+67616739 | None:intergenic |
| GTCGGAATTGGACTCGCCGG+CGG | 0.582012 | 4_4:-67619578 | Msa0697560:CDS |
| TGAAAGCATAACCGAAGAGA+GGG | 0.585109 | 4_4:+67616299 | None:intergenic |
| AAGCATGTCCAACACGATGT+AGG | 0.590951 | 4_4:+67616731 | None:intergenic |
| ACGCTTCCAATCCCAAACTC+TGG | 0.591346 | 4_4:-67619607 | Msa0697560:CDS |
| GGTAGATATAGCCCCGTGGG+AGG | 0.593981 | 4_4:+67617091 | None:intergenic |
| TGCATTTGGAAGAACTCCAA+TGG | 0.595067 | 4_4:+67617070 | None:intergenic |
| ATGTAGGACAGATGGATCGC+GGG | 0.601892 | 4_4:+67616747 | None:intergenic |
| TGACGTGAAGGGCTATGTGA+CGG | 0.604250 | 4_4:-67618293 | Msa0697560:CDS |
| TTTGTAGGTACTGATACTAC+AGG | 0.606632 | 4_4:-67617161 | Msa0697560:intron |
| AATCAGGTTTAGGAGTGTTG+CGG | 0.609654 | 4_4:+67619516 | None:intergenic |
| ATGCCATCGTGTGTCCCGGG+AGG | 0.611741 | 4_4:-67618008 | Msa0697560:CDS |
| CCATCTGTCCTACATCGTGT+TGG | 0.612343 | 4_4:-67616739 | Msa0697560:CDS |
| CAGCTTCAGTGATTGCGACA+TGG | 0.613605 | 4_4:+67619640 | None:intergenic |
| GGAGAGAACGACGATCCCGC+CGG | 0.617744 | 4_4:+67619562 | None:intergenic |
| AGAAGAAAGAAGTTGCTTGG+CGG | 0.619812 | 4_4:+67619436 | None:intergenic |
| ACGTGAAGGGCTATGTGACG+GGG | 0.625068 | 4_4:-67618291 | Msa0697560:CDS |
| GACCCTCCCGGGACACACGA+TGG | 0.626294 | 4_4:+67618005 | None:intergenic |
| TTGATTGTCCAACAGGATGG+TGG | 0.629395 | 4_4:-67614026 | Msa0697560:intron |
| GTCCCGGGAGGGTCTTCTAG+TGG | 0.632372 | 4_4:-67617996 | Msa0697560:CDS |
| AATGGTAGATATAGCCCCGT+GGG | 0.635696 | 4_4:+67617088 | None:intergenic |
| GTAGATATAGCCCCGTGGGA+GGG | 0.636940 | 4_4:+67617092 | None:intergenic |
| AATTTCCATGCAGAATGTGA+AGG | 0.637176 | 4_4:-67611197 | Msa0697560:intron |
| CTGCTAGAGAATCACTACTT+CGG | 0.637341 | 4_4:-67611156 | Msa0697560:CDS |
| AGTGGACTGTCTGCTACAGA+GGG | 0.640471 | 4_4:+67613990 | None:intergenic |
| ATCACTACTTCGGTATAAGG+AGG | 0.642249 | 4_4:-67611146 | Msa0697560:CDS |
| AAACATGTTTGGGCACAACA+CGG | 0.647262 | 4_4:+67614731 | None:intergenic |
| GGAGGCGGAGAAGACTGCGA+TGG | 0.655149 | 4_4:-67618236 | Msa0697560:CDS |
| GGGTTAAATCAGTCAAACGC+AGG | 0.661250 | 4_4:-67614759 | Msa0697560:CDS |
| GACCGCTCTGCTCTTCAATG+GGG | 0.669457 | 4_4:-67618209 | Msa0697560:CDS |
| GTGGAAGAGAACGCACGAGG+AGG | 0.677450 | 4_4:-67618254 | Msa0697560:CDS |
| AGGCAGTCACTCACTATACG+GGG | 0.684444 | 4_4:-67611809 | Msa0697560:CDS |
| GTGAAGGCATATCTGAGACG+TGG | 0.687956 | 4_4:-67611181 | Msa0697560:CDS |
| GATGTAGGACAGATGGATCG+CGG | 0.698946 | 4_4:+67616746 | None:intergenic |
| CAATGGTAGATATAGCCCCG+TGG | 0.701690 | 4_4:+67617087 | None:intergenic |
| TGTGTGGAAGAGAACGCACG+AGG | 0.709260 | 4_4:-67618257 | Msa0697560:CDS |
| CGGGGTTTGGAAATCCTGTG+TGG | 0.712644 | 4_4:-67618273 | Msa0697560:CDS |
| GGCAGTCACTCACTATACGG+GGG | 0.716872 | 4_4:-67611808 | Msa0697560:CDS |
| TCATTCATCTCAAACCATGG+AGG | 0.721307 | 4_4:-67613724 | Msa0697560:CDS |
| AGCCCCATTGAAGAGCAGAG+CGG | 0.748277 | 4_4:+67618207 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTATGTTTTATATTTCT+TGG | - | chr4_4:67612078-67612097 | Msa0697560:intron | 10.0% |
| !!! | ATTTATGTTTTATATTTCTT+GGG | - | chr4_4:67612079-67612098 | Msa0697560:intron | 10.0% |
| !!! | TTATTACATTCTTAATATTT+TGG | - | chr4_4:67613025-67613044 | Msa0697560:intron | 10.0% |
| !!! | TTTTTTAATTCATGATTAAT+GGG | - | chr4_4:67613601-67613620 | Msa0697560:CDS | 10.0% |
| !!! | TGAAATATTTTTTGAAAATT+AGG | + | chr4_4:67615770-67615789 | None:intergenic | 10.0% |
| !!! | ATTTTTATTTAAAATATTCC+AGG | + | chr4_4:67615894-67615913 | None:intergenic | 10.0% |
| !!! | ATAAAAATTGAAAGATTTTT+AGG | - | chr4_4:67615906-67615925 | Msa0697560:intron | 10.0% |
| !! | TATTAGAATAGAAAATAAAT+TGG | + | chr4_4:67619335-67619354 | None:intergenic | 10.0% |
| !!! | TTATTTTCTATTCTAATATT+TGG | - | chr4_4:67619337-67619356 | Msa0697560:intron | 10.0% |
| !!! | TTTTTATACTTTTTCTTTGA+TGG | - | chr4_4:67611555-67611574 | Msa0697560:intron | 15.0% |
| !!! | TTTTATACTTTTTCTTTGAT+GGG | - | chr4_4:67611556-67611575 | Msa0697560:intron | 15.0% |
| !!! | TTTTTATACATTTCTTTTGA+TGG | - | chr4_4:67611637-67611656 | Msa0697560:intron | 15.0% |
| !!! | TTTTATACATTTCTTTTGAT+GGG | - | chr4_4:67611638-67611657 | Msa0697560:intron | 15.0% |
| !!! | TTTTTTTGTTTTATGTTTCT+TGG | - | chr4_4:67611896-67611915 | Msa0697560:intron | 15.0% |
| !!! | TTTTTTGTTTTATGTTTCTT+GGG | - | chr4_4:67611897-67611916 | Msa0697560:intron | 15.0% |
| !!! | TTTATGTTTTATATTTCTTG+GGG | - | chr4_4:67612080-67612099 | Msa0697560:intron | 15.0% |
| !!! | AAAAACTAACACTTTTTTTA+TGG | + | chr4_4:67612152-67612171 | None:intergenic | 15.0% |
| !!! | AACTCAACAAATTTTAAAAA+TGG | + | chr4_4:67612213-67612232 | None:intergenic | 15.0% |
| !!! | TTTAGTACTTATATTCATTT+TGG | - | chr4_4:67613118-67613137 | Msa0697560:intron | 15.0% |
| !!! | CTTTTTTAATTCATGATTAA+TGG | - | chr4_4:67613600-67613619 | Msa0697560:CDS | 15.0% |
| !!! | TTCTTTAGTTTATAAATTGT+TGG | - | chr4_4:67615228-67615247 | Msa0697560:intron | 15.0% |
| !! | AACTTATAACAACATAATAA+GGG | + | chr4_4:67616375-67616394 | None:intergenic | 15.0% |
| !! | TAACTTATAACAACATAATA+AGG | + | chr4_4:67616376-67616395 | None:intergenic | 15.0% |
| !!! | ATATTTTCTTTGATAACTTT+TGG | - | chr4_4:67616446-67616465 | Msa0697560:intron | 15.0% |
| !!! | TTATTGCTCTAAAATTTTTA+TGG | - | chr4_4:67617055-67617074 | Msa0697560:CDS | 15.0% |
| !! | TGAATTTGAACTTAAATATT+AGG | - | chr4_4:67617889-67617908 | Msa0697560:intron | 15.0% |
| !!! | CTTAAATATTAGGTTATTTT+AGG | - | chr4_4:67617899-67617918 | Msa0697560:intron | 15.0% |
| !! | CTAATATAGTAAAAAAATCT+TGG | - | chr4_4:67617954-67617973 | Msa0697560:CDS | 15.0% |
| !!! | AGATTTTTTTTTTTTTTTGC+AGG | - | chr4_4:67619012-67619031 | Msa0697560:intron | 15.0% |
| !!! | GATTTTTTTTTTTTTTTGCA+GGG | - | chr4_4:67619013-67619032 | Msa0697560:intron | 15.0% |
| !! | TATAGAAAGTTATACAAATT+CGG | + | chr4_4:67619600-67619619 | None:intergenic | 15.0% |
| !! | TTGGAAGAAAAATAAAGAAT+GGG | + | chr4_4:67611187-67611206 | None:intergenic | 20.0% |
| !! | ATTGGAAGAAAAATAAAGAA+TGG | + | chr4_4:67611188-67611207 | None:intergenic | 20.0% |
| !!! | TTTATACTTTTTCTTTGATG+GGG | - | chr4_4:67611557-67611576 | Msa0697560:intron | 20.0% |
| !! | ATTATTTGAGTAGAAAAGAT+TGG | - | chr4_4:67611613-67611632 | Msa0697560:CDS | 20.0% |
| !! | TTATTTGAGTAGAAAAGATT+GGG | - | chr4_4:67611614-67611633 | Msa0697560:CDS | 20.0% |
| !!! | TTTATACATTTCTTTTGATG+GGG | - | chr4_4:67611639-67611658 | Msa0697560:intron | 20.0% |
| !!! | TGATATTATGTTTTAAGCTT+TGG | - | chr4_4:67611679-67611698 | Msa0697560:intron | 20.0% |
| !! | ATTATTTGAGTAGAAAAGAT+TGG | - | chr4_4:67611613-67611632 | Msa0697560:CDS | 20.0% |
| !!! | TTTTATCACTTTTTCTTTGA+TGG | - | chr4_4:67611730-67611749 | Msa0697560:intron | 20.0% |
| !!! | TTTATCACTTTTTCTTTGAT+GGG | - | chr4_4:67611731-67611750 | Msa0697560:intron | 20.0% |
| !!! | AAAAACTAACACATCTTTTA+TGG | + | chr4_4:67611803-67611822 | None:intergenic | 20.0% |
| !!! | TGGTTAGTTTTTAGTTTTAT+TGG | - | chr4_4:67611861-67611880 | Msa0697560:intron | 20.0% |
| !!! | GGTTAGTTTTTAGTTTTATT+GGG | - | chr4_4:67611862-67611881 | Msa0697560:intron | 20.0% |
| !!! | TTTTTGTTTTATGTTTCTTG+GGG | - | chr4_4:67611898-67611917 | Msa0697560:intron | 20.0% |
| !!! | TGTTAATGTTTTTCAAGTAT+CGG | - | chr4_4:67612186-67612205 | Msa0697560:intron | 20.0% |
| !!! | TGTTTTTGTTTTTTGTTTCT+TGG | - | chr4_4:67612251-67612270 | Msa0697560:intron | 20.0% |
| !!! | GTTTTTGTTTTTTGTTTCTT+GGG | - | chr4_4:67612252-67612271 | Msa0697560:intron | 20.0% |
| !!! | TTTTTGTTTTTTGTTTCTTG+GGG | - | chr4_4:67612253-67612272 | Msa0697560:intron | 20.0% |
| !! | AAAAACTAAAACTTCCTTTA+TGG | + | chr4_4:67612338-67612357 | None:intergenic | 20.0% |
| !!! | ATAAAGGAAGTTTTAGTTTT+TGG | - | chr4_4:67612337-67612356 | Msa0697560:intron | 20.0% |
| !! | AAAAAACTAACTCTTTGATT+CGG | + | chr4_4:67612421-67612440 | None:intergenic | 20.0% |
| !!! | TTTTTTTATGTTGTGTTTGT+TGG | - | chr4_4:67612446-67612465 | Msa0697560:intron | 20.0% |
| !!! | TTTTTTATGTTGTGTTTGTT+GGG | - | chr4_4:67612447-67612466 | Msa0697560:intron | 20.0% |
| !! | TAGAGGTAGAAATTATTTAT+AGG | + | chr4_4:67612967-67612986 | None:intergenic | 20.0% |
| !!! | CTTAATATTTTGGTCATTTA+TGG | - | chr4_4:67613035-67613054 | Msa0697560:intron | 20.0% |
| !! | TTGTTATCCATACAATATAA+GGG | - | chr4_4:67613485-67613504 | Msa0697560:intron | 20.0% |
| !! | TCATGAATTAAAAAAGAAAC+AGG | + | chr4_4:67613596-67613615 | None:intergenic | 20.0% |
| !!! | TTTTTGCTATGATTATGATT+TGG | - | chr4_4:67613872-67613891 | Msa0697560:intron | 20.0% |
| !!! | TGTGTAATTATTAAGTGTTT+TGG | - | chr4_4:67614427-67614446 | Msa0697560:intron | 20.0% |
| !! | TCATAATAGAAAAAATGACA+AGG | - | chr4_4:67614642-67614661 | Msa0697560:CDS | 20.0% |
| !! | TTCTCAAAAAAGAAGAAAAA+GGG | - | chr4_4:67614714-67614733 | Msa0697560:CDS | 20.0% |
| !! | TAAACTAAAGAAAAAATCGA+AGG | + | chr4_4:67615220-67615239 | None:intergenic | 20.0% |
| !! | GAATAAAGAAAAGAAAGTTT+AGG | + | chr4_4:67615820-67615839 | None:intergenic | 20.0% |
| !! | TTAAATCCAATTATGAAGAA+TGG | - | chr4_4:67616097-67616116 | Msa0697560:intron | 20.0% |
| !! | TAAATCCAATTATGAAGAAT+GGG | - | chr4_4:67616098-67616117 | Msa0697560:intron | 20.0% |
| !! | ATTATCGTATGTAGTATTAA+TGG | + | chr4_4:67616178-67616197 | None:intergenic | 20.0% |
| !!! | TTCTTGTACAATTTCTTTTA+TGG | - | chr4_4:67616342-67616361 | Msa0697560:CDS | 20.0% |
| !!! | TAGAATTGCCTAAATTATTT+TGG | + | chr4_4:67616574-67616593 | None:intergenic | 20.0% |
| !! | AAAAATAAAACTCTCCTATT+TGG | - | chr4_4:67617540-67617559 | Msa0697560:intron | 20.0% |
| !!! | CAACTTTGCTATTAAAATAA+GGG | + | chr4_4:67618087-67618106 | None:intergenic | 20.0% |
| !!! | TCAACTTTGCTATTAAAATA+AGG | + | chr4_4:67618088-67618107 | None:intergenic | 20.0% |
| !!! | AAAGTAGCATCAATTTTATT+AGG | + | chr4_4:67618584-67618603 | None:intergenic | 20.0% |
| !! | ATTTGAATGAACAATTAATC+AGG | + | chr4_4:67618901-67618920 | None:intergenic | 20.0% |
| !! | GTGATTTATATGCTATAAAT+CGG | - | chr4_4:67618960-67618979 | Msa0697560:intron | 20.0% |
| !! | TGATTTATATGCTATAAATC+GGG | - | chr4_4:67618961-67618980 | Msa0697560:intron | 20.0% |
| !!! | AAAGATTCCTTTATTTTGTT+GGG | - | chr4_4:67619552-67619571 | Msa0697560:CDS | 20.0% |
| !! | GATTCTTTAAATTATGATAC+CGG | - | chr4_4:67619574-67619593 | Msa0697560:CDS | 20.0% |
| ! | AGAGTTGAGAAAGAATATTT+AGG | + | chr4_4:67611135-67611154 | None:intergenic | 25.0% |
| !!! | GAAAAATAAAGAATGGGTTT+TGG | + | chr4_4:67611181-67611200 | None:intergenic | 25.0% |
| !!! | AGAATATGTGTTTTAAGCTT+TGG | - | chr4_4:67611586-67611605 | Msa0697560:intron | 25.0% |
| !!! | TTATCACTTTTTCTTTGATG+GGG | - | chr4_4:67611732-67611751 | Msa0697560:intron | 25.0% |
| !!! | TGTTAGTGTTTTTTAAGCAT+TGG | - | chr4_4:67611841-67611860 | Msa0697560:CDS | 25.0% |
| !!! | TTGTTATGTTTTTTGAGCAT+TGG | - | chr4_4:67612378-67612397 | Msa0697560:intron | 25.0% |
| !!! | TTTTTATGTTGTGTTTGTTG+GGG | - | chr4_4:67612448-67612467 | Msa0697560:intron | 25.0% |
| ! | TCACATACTAAACTTTGATT+CGG | + | chr4_4:67612514-67612533 | None:intergenic | 25.0% |
| !! | TAGTATGTGACATTTTTATC+TGG | - | chr4_4:67612524-67612543 | Msa0697560:intron | 25.0% |
| !! | AGTATGTGACATTTTTATCT+GGG | - | chr4_4:67612525-67612544 | Msa0697560:intron | 25.0% |
| !! | TTATGGATGAATTCTCTTTT+GGG | - | chr4_4:67612712-67612731 | Msa0697560:intron | 25.0% |
| !! | CATTATTATCTCAGATTTTC+TGG | - | chr4_4:67612809-67612828 | Msa0697560:intron | 25.0% |
| ! | TGCTTGAAATGCAAATTATA+AGG | - | chr4_4:67612989-67613008 | Msa0697560:intron | 25.0% |
| ! | ATGCAAATTATAAGGTTTAC+TGG | - | chr4_4:67612997-67613016 | Msa0697560:intron | 25.0% |
| !! | TATTGAAACCTCTCATATTT+TGG | - | chr4_4:67613080-67613099 | Msa0697560:intron | 25.0% |
| ! | GTGCTAATATTTCAAATGTT+TGG | - | chr4_4:67613360-67613379 | Msa0697560:intron | 25.0% |
| ! | GTTGTTATCCATACAATATA+AGG | - | chr4_4:67613484-67613503 | Msa0697560:intron | 25.0% |
| ! | AAAGATTATTGTGTCTTTGT+AGG | - | chr4_4:67613701-67613720 | Msa0697560:CDS | 25.0% |
| ! | ATAAGAAATTACACATAGTG+AGG | - | chr4_4:67614012-67614031 | Msa0697560:CDS | 25.0% |
| ! | TTTACTTCAATTGAATTCAG+TGG | - | chr4_4:67614167-67614186 | Msa0697560:intron | 25.0% |
| ! | CAAAAGACAATATATGTCAT+TGG | - | chr4_4:67614255-67614274 | Msa0697560:intron | 25.0% |
| !!! | TGAAAACCAATTTTTTTTCC+TGG | - | chr4_4:67614321-67614340 | Msa0697560:intron | 25.0% |
| ! | AAATCTCCAGGAAAAAAAAT+TGG | + | chr4_4:67614330-67614349 | None:intergenic | 25.0% |
| !!! | CTCTAAAATTACCAAACAAA+AGG | - | chr4_4:67614399-67614418 | Msa0697560:intron | 25.0% |
| !! | TACACAAAATTCCTTTTGTT+TGG | + | chr4_4:67614413-67614432 | None:intergenic | 25.0% |
| !!! | ATTAAGTGTTTTGGTCATTT+TGG | - | chr4_4:67614436-67614455 | Msa0697560:intron | 25.0% |
| ! | TTGTGAGTATATTGCTAAAA+AGG | - | chr4_4:67614492-67614511 | Msa0697560:intron | 25.0% |
| !! | TATAGATGTTCCATTTTGTT+GGG | + | chr4_4:67614551-67614570 | None:intergenic | 25.0% |
| !! | ATATAGATGTTCCATTTTGT+TGG | + | chr4_4:67614552-67614571 | None:intergenic | 25.0% |
| ! | ACGAGTAAAGAATTAAGTAT+TGG | - | chr4_4:67614687-67614706 | Msa0697560:CDS | 25.0% |
| ! | GTTCTCAAAAAAGAAGAAAA+AGG | - | chr4_4:67614713-67614732 | Msa0697560:CDS | 25.0% |
| ! | TCTCAAAAAAGAAGAAAAAG+GGG | - | chr4_4:67614715-67614734 | Msa0697560:CDS | 25.0% |
| !! | TTCATTTTGCCTCTTTAAAT+GGG | + | chr4_4:67614793-67614812 | None:intergenic | 25.0% |
| !! | ATTCATTTTGCCTCTTTAAA+TGG | + | chr4_4:67614794-67614813 | None:intergenic | 25.0% |
| !! | TTCAGCTTATAACTTTTCTT+TGG | + | chr4_4:67614835-67614854 | None:intergenic | 25.0% |
| ! | TGTTATAACATACAAGTCTT+TGG | + | chr4_4:67615455-67615474 | None:intergenic | 25.0% |
| !!! | TCTATTCTAGGTTTGTTAAA+CGG | + | chr4_4:67615580-67615599 | None:intergenic | 25.0% |
| ! | TCTAATCAATTACTGAATGT+GGG | - | chr4_4:67615693-67615712 | Msa0697560:intron | 25.0% |
| ! | CACATATACTAAATGATACT+GGG | + | chr4_4:67615842-67615861 | None:intergenic | 25.0% |
| ! | TCACATATACTAAATGATAC+TGG | + | chr4_4:67615843-67615862 | None:intergenic | 25.0% |
| !!! | AATTGAAAGATTTTTAGGAC+AGG | - | chr4_4:67615911-67615930 | Msa0697560:intron | 25.0% |
| ! | TTTAACCCATTCTTCATAAT+TGG | + | chr4_4:67616106-67616125 | None:intergenic | 25.0% |
| !! | GTACAATTTCTTTTATGGTA+AGG | - | chr4_4:67616347-67616366 | Msa0697560:CDS | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | chr4_4:67616682-67616701 | Msa0697560:CDS | 25.0% |
| ! | GTTCTATCATAAACCAAATT+TGG | + | chr4_4:67616722-67616741 | None:intergenic | 25.0% |
| ! | ATAATGCAAAACTTCTATCA+TGG | + | chr4_4:67616949-67616968 | None:intergenic | 25.0% |
| !!! | TTCTATAATCATTTTTCTGC+AGG | - | chr4_4:67617316-67617335 | Msa0697560:intron | 25.0% |
| !!! | ATAGGAGAGTTTTATTTTTC+TGG | + | chr4_4:67617539-67617558 | None:intergenic | 25.0% |
| ! | TATAAAAGAGGGAAATGATT+TGG | + | chr4_4:67617618-67617637 | None:intergenic | 25.0% |
| ! | TTTGCATCTCATCATTTAAA+GGG | + | chr4_4:67617706-67617725 | None:intergenic | 25.0% |
| ! | ATTTGCATCTCATCATTTAA+AGG | + | chr4_4:67617707-67617726 | None:intergenic | 25.0% |
| ! | TCCTCATTTAATAACAACTT+CGG | + | chr4_4:67617740-67617759 | None:intergenic | 25.0% |
| !!! | ACAGTTTTTTGTAAAAGGTT+CGG | + | chr4_4:67617809-67617828 | None:intergenic | 25.0% |
| !!! | ATTTTAGGAAAATGCTAACT+AGG | - | chr4_4:67617914-67617933 | Msa0697560:intron | 25.0% |
| !!! | TTTTAGGAAAATGCTAACTA+GGG | - | chr4_4:67617915-67617934 | Msa0697560:intron | 25.0% |
| !!! | AGTTACATTTTGCTTGTTTT+AGG | - | chr4_4:67618279-67618298 | Msa0697560:CDS | 25.0% |
| !! | TAGGTAATAAGTTGAGAAAA+TGG | + | chr4_4:67618565-67618584 | None:intergenic | 25.0% |
| ! | GAAATAGTAGAAGAAATAGA+TGG | + | chr4_4:67618629-67618648 | None:intergenic | 25.0% |
| ! | TTCCTTGTTAATAATCTATG+TGG | - | chr4_4:67618665-67618684 | Msa0697560:intron | 25.0% |
| ! | ATCCACATAGATTATTAACA+AGG | + | chr4_4:67618670-67618689 | None:intergenic | 25.0% |
| !! | ATACTTTTGAATTGGGTAAA+AGG | + | chr4_4:67618802-67618821 | None:intergenic | 25.0% |
| !! | TTTTACCCAATTCAAAAGTA+TGG | - | chr4_4:67618801-67618820 | Msa0697560:intron | 25.0% |
| ! | ATATAGTCATCTATTATCTG+TGG | - | chr4_4:67618845-67618864 | Msa0697560:intron | 25.0% |
| ! | GATTTATATGCTATAAATCG+GGG | - | chr4_4:67618962-67618981 | Msa0697560:intron | 25.0% |
| ! | ATAGAAAATAAATTGGTCCA+TGG | + | chr4_4:67619328-67619347 | None:intergenic | 25.0% |
| ! | CAACAAAATAAAGGAATCTT+TGG | + | chr4_4:67619553-67619572 | None:intergenic | 25.0% |
| !!! | CAAAGATTCCTTTATTTTGT+TGG | - | chr4_4:67619551-67619570 | Msa0697560:CDS | 25.0% |
| ! | AAAGAATCCCAACAAAATAA+AGG | + | chr4_4:67619562-67619581 | None:intergenic | 25.0% |
| !!! | ATAAAGAATGGGTTTTGGAA+GGG | + | chr4_4:67611176-67611195 | None:intergenic | 30.0% |
| !!! | AATAAAGAATGGGTTTTGGA+AGG | + | chr4_4:67611177-67611196 | None:intergenic | 30.0% |
| TCAGAGAAAATGTGTGAAAT+TGG | + | chr4_4:67611206-67611225 | None:intergenic | 30.0% | |
| !! | TCAATAAAAGCACCAAAATC+AGG | + | chr4_4:67611380-67611399 | None:intergenic | 30.0% |
| !! | CAATACTTAATTTGCCATGA+AGG | - | chr4_4:67611966-67611985 | Msa0697560:intron | 30.0% |
| AAAAACTAACACATCCTTCA+TGG | + | chr4_4:67611983-67612002 | None:intergenic | 30.0% | |
| !! | CAACATTTGATTTGCCATAA+AGG | - | chr4_4:67612321-67612340 | Msa0697560:intron | 30.0% |
| !! | TTTTTCAGATTTGACGTGAA+GGG | - | chr4_4:67612573-67612592 | Msa0697560:intron | 30.0% |
| ! | GTTATGGATGAATTCTCTTT+TGG | - | chr4_4:67612711-67612730 | Msa0697560:intron | 30.0% |
| AAGATAACTATACAGAGCTA+AGG | + | chr4_4:67612758-67612777 | None:intergenic | 30.0% | |
| TTTGCATTTCAAGCAATTAG+AGG | + | chr4_4:67612984-67613003 | None:intergenic | 30.0% | |
| GTAAATGACCAAAATATGAG+AGG | + | chr4_4:67613091-67613110 | None:intergenic | 30.0% | |
| ATTCTACTAAACTACATTCC+TGG | - | chr4_4:67613173-67613192 | Msa0697560:intron | 30.0% | |
| ATTCAATAGAACAAGCTAAC+AGG | + | chr4_4:67613257-67613276 | None:intergenic | 30.0% | |
| !! | CAAATATTTTTGAGCTGGAA+GGG | + | chr4_4:67613289-67613308 | None:intergenic | 30.0% |
| !! | TCAAATATTTTTGAGCTGGA+AGG | + | chr4_4:67613290-67613309 | None:intergenic | 30.0% |
| !! | CAGATCAAATATTTTTGAGC+TGG | + | chr4_4:67613294-67613313 | None:intergenic | 30.0% |
| CAGCTCAAAAATATTTGATC+TGG | - | chr4_4:67613292-67613311 | Msa0697560:intron | 30.0% | |
| TGAATCGAAGTTATATCATC+TGG | - | chr4_4:67613332-67613351 | Msa0697560:intron | 30.0% | |
| GTTAGTAATATTACACCTTG+TGG | - | chr4_4:67613410-67613429 | Msa0697560:intron | 30.0% | |
| ATTACTGCCCTTATATTGTA+TGG | + | chr4_4:67613495-67613514 | None:intergenic | 30.0% | |
| AAAAGAAACAGGATTATGCA+TGG | + | chr4_4:67613585-67613604 | None:intergenic | 30.0% | |
| CTTACAATTATACCATGTTG+TGG | - | chr4_4:67613626-67613645 | Msa0697560:CDS | 30.0% | |
| AATCAAACAAACAGCTATTG+AGG | + | chr4_4:67613652-67613671 | None:intergenic | 30.0% | |
| TCATGTTCTCATACATAGTT+AGG | + | chr4_4:67613682-67613701 | None:intergenic | 30.0% | |
| AAAACTATGCATCTTACCAA+TGG | + | chr4_4:67613846-67613865 | None:intergenic | 30.0% | |
| TGATTACTTAATTGCATTGC+AGG | - | chr4_4:67614099-67614118 | Msa0697560:intron | 30.0% | |
| ! | TATGATACACCTTGACTTTT+TGG | + | chr4_4:67614196-67614215 | None:intergenic | 30.0% |
| ATCAATTTCACTAAATCTCC+AGG | + | chr4_4:67614342-67614361 | None:intergenic | 30.0% | |
| ! | ATAGATGTTCCATTTTGTTG+GGG | + | chr4_4:67614550-67614569 | None:intergenic | 30.0% |
| TATATTGAAAACCCTCTCTT+CGG | - | chr4_4:67614567-67614586 | Msa0697560:intron | 30.0% | |
| GAAAAAATGACAAGGTAGTA+AGG | - | chr4_4:67614650-67614669 | Msa0697560:CDS | 30.0% | |
| CTCAAAAAAGAAGAAAAAGG+GGG | - | chr4_4:67614716-67614735 | Msa0697560:CDS | 30.0% | |
| TAAAGAGGCAAAATGAATCT+TGG | - | chr4_4:67614796-67614815 | Msa0697560:intron | 30.0% | |
| AGTTATAAGCTGAACACAAA+AGG | - | chr4_4:67614841-67614860 | Msa0697560:intron | 30.0% | |
| ACACAAAAGGCAATTTATAC+TGG | - | chr4_4:67614854-67614873 | Msa0697560:intron | 30.0% | |
| !! | AGTTGCTTATTTTTCATAGC+TGG | + | chr4_4:67614919-67614938 | None:intergenic | 30.0% |
| TAAACGCAACACAGATTAAT+CGG | + | chr4_4:67615166-67615185 | None:intergenic | 30.0% | |
| ! | AGAAAAAATCGAAGGCATAA+TGG | + | chr4_4:67615212-67615231 | None:intergenic | 30.0% |
| AGATTTCATGAACAACAAGT+TGG | + | chr4_4:67615282-67615301 | None:intergenic | 30.0% | |
| CATGAAATCTACCAAAAACA+AGG | - | chr4_4:67615292-67615311 | Msa0697560:intron | 30.0% | |
| !!! | CAATTTACATGCCTTGTTTT+TGG | + | chr4_4:67615306-67615325 | None:intergenic | 30.0% |
| AACTCTCTTATCATTGTCAA+CGG | - | chr4_4:67615331-67615350 | Msa0697560:intron | 30.0% | |
| !! | CATATTCTAAGATTCAAGGA+TGG | + | chr4_4:67615383-67615402 | None:intergenic | 30.0% |
| !! | AGCACATATTCTAAGATTCA+AGG | + | chr4_4:67615387-67615406 | None:intergenic | 30.0% |
| TGTATGTTATAACAACCACA+AGG | - | chr4_4:67615461-67615480 | Msa0697560:intron | 30.0% | |
| CTCTAATCAATTACTGAATG+TGG | - | chr4_4:67615692-67615711 | Msa0697560:intron | 30.0% | |
| ! | ATTTAAAATATTCCAGGCAC+AGG | + | chr4_4:67615888-67615907 | None:intergenic | 30.0% |
| ATGGCTTCATAAACATGTTT+GGG | + | chr4_4:67616159-67616178 | None:intergenic | 30.0% | |
| AATGGCTTCATAAACATGTT+TGG | + | chr4_4:67616160-67616179 | None:intergenic | 30.0% | |
| ! | TAAAAGCCTTGTATAAAGTC+AGG | - | chr4_4:67616199-67616218 | Msa0697560:intron | 30.0% |
| TGCATTTCAAAGTCTGTTAA+AGG | - | chr4_4:67616236-67616255 | Msa0697560:intron | 30.0% | |
| CAAAGAAAATATTGTCACTC+TGG | + | chr4_4:67616438-67616457 | None:intergenic | 30.0% | |
| ACTATGAGAATCAAAGATCT+AGG | + | chr4_4:67616544-67616563 | None:intergenic | 30.0% | |
| TGAAGTGGCCAAAATAATTT+AGG | - | chr4_4:67616563-67616582 | Msa0697560:intron | 30.0% | |
| ATTCTACTCTTATGTATCCA+TGG | - | chr4_4:67616588-67616607 | Msa0697560:intron | 30.0% | |
| ! | GTTTCTCTAATAGTTTTCCT+AGG | + | chr4_4:67616665-67616684 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | chr4_4:67616687-67616706 | None:intergenic | 30.0% |
| TGGTTTATGATAGAACACTA+TGG | - | chr4_4:67616726-67616745 | Msa0697560:CDS | 30.0% | |
| ATCAAAACAAGGAGATAGTA+GGG | + | chr4_4:67616836-67616855 | None:intergenic | 30.0% | |
| AATCAAAACAAGGAGATAGT+AGG | + | chr4_4:67616837-67616856 | None:intergenic | 30.0% | |
| ! | TTCTTTGCATTAAGCTTTAG+TGG | + | chr4_4:67616908-67616927 | None:intergenic | 30.0% |
| CTAAAGCTTAATGCAAAGAA+AGG | - | chr4_4:67616908-67616927 | Msa0697560:intron | 30.0% | |
| !!! | TTTTTTGACTCTAGAGCTAA+AGG | + | chr4_4:67617016-67617035 | None:intergenic | 30.0% |
| ATTGCTCTTACATTATTTCC+AGG | - | chr4_4:67617086-67617105 | Msa0697560:CDS | 30.0% | |
| CAATCATCATGATATCCTAA+AGG | + | chr4_4:67617120-67617139 | None:intergenic | 30.0% | |
| ATTTCTTCTAGACACTATCT+TGG | - | chr4_4:67617182-67617201 | Msa0697560:intron | 30.0% | |
| !! | ATTGATGTTTGGTAATGGAA+TGG | + | chr4_4:67617253-67617272 | None:intergenic | 30.0% |
| ATTCCATTACCAAACATCAA+TGG | - | chr4_4:67617252-67617271 | Msa0697560:intron | 30.0% | |
| TTTCCATTGATGTTTGGTAA+TGG | + | chr4_4:67617258-67617277 | None:intergenic | 30.0% | |
| ! | CTTTAAAAGTTCAGAAGGTT+CGG | + | chr4_4:67617283-67617302 | None:intergenic | 30.0% |
| ! | TTCTCCTTTAAAAGTTCAGA+AGG | + | chr4_4:67617288-67617307 | None:intergenic | 30.0% |
| !! | TTCTGAACTTTTAAAGGAGA+AGG | - | chr4_4:67617287-67617306 | Msa0697560:intron | 30.0% |
| AATAAAACTCTCCTATTTGG+TGG | - | chr4_4:67617543-67617562 | Msa0697560:intron | 30.0% | |
| !! | CGTTTTAAATTCCACCAAAT+AGG | + | chr4_4:67617557-67617576 | None:intergenic | 30.0% |
| ! | AATTTAAAACGTATTGCGAG+AGG | - | chr4_4:67617566-67617585 | Msa0697560:intron | 30.0% |
| ! | ATTTAAAACGTATTGCGAGA+GGG | - | chr4_4:67617567-67617586 | Msa0697560:intron | 30.0% |
| !! | GTTGAGAGTGTTATAAAAGA+GGG | + | chr4_4:67617629-67617648 | None:intergenic | 30.0% |
| !! | TGTTGAGAGTGTTATAAAAG+AGG | + | chr4_4:67617630-67617649 | None:intergenic | 30.0% |
| TTGCATCTCATCATTTAAAG+GGG | + | chr4_4:67617705-67617724 | None:intergenic | 30.0% | |
| ! | TCCGAAGTTGTTATTAAATG+AGG | - | chr4_4:67617736-67617755 | Msa0697560:intron | 30.0% |
| ! | GTTGTTATTAAATGAGGACT+TGG | - | chr4_4:67617742-67617761 | Msa0697560:intron | 30.0% |
| ! | TGCATTTTCCAATCATACTT+CGG | + | chr4_4:67617786-67617805 | None:intergenic | 30.0% |
| !!! | CGCTTACAGTTTTTTGTAAA+AGG | + | chr4_4:67617814-67617833 | None:intergenic | 30.0% |
| TTTAGGAAAATGCTAACTAG+GGG | - | chr4_4:67617916-67617935 | Msa0697560:intron | 30.0% | |
| AAATTACCTCTCTGAACTTT+GGG | + | chr4_4:67618382-67618401 | None:intergenic | 30.0% | |
| AAAATTACCTCTCTGAACTT+TGG | + | chr4_4:67618383-67618402 | None:intergenic | 30.0% | |
| ATAAGCTATCCATACAGAAT+CGG | + | chr4_4:67618472-67618491 | None:intergenic | 30.0% | |
| AAGAAATAGATGGAACACAA+TGG | + | chr4_4:67618619-67618638 | None:intergenic | 30.0% | |
| AGACTGACATTTATGTTAAG+GGG | + | chr4_4:67618773-67618792 | None:intergenic | 30.0% | |
| GAGACTGACATTTATGTTAA+GGG | + | chr4_4:67618774-67618793 | None:intergenic | 30.0% | |
| AGAGACTGACATTTATGTTA+AGG | + | chr4_4:67618775-67618794 | None:intergenic | 30.0% | |
| ! | ATCAGCCATACTTTTGAATT+GGG | + | chr4_4:67618809-67618828 | None:intergenic | 30.0% |
| ! | TCATTCAAATTTTATCCACG+AGG | - | chr4_4:67618911-67618930 | Msa0697560:intron | 30.0% |
| AACTAAAAACTAAATCCTCG+TGG | + | chr4_4:67618929-67618948 | None:intergenic | 30.0% | |
| GGCATTTAAAGAAAAGCAAT+GGG | - | chr4_4:67619042-67619061 | Msa0697560:intron | 30.0% | |
| TAAAGAAAAGCAATGGGATA+AGG | - | chr4_4:67619048-67619067 | Msa0697560:intron | 30.0% | |
| TAGAACAGTTGGTTATTAGA+GGG | + | chr4_4:67619384-67619403 | None:intergenic | 30.0% | |
| CATCAAACTGATCATTATCA+AGG | + | chr4_4:67619520-67619539 | None:intergenic | 30.0% | |
| TGGAAATTACACACTATTCT+CGG | + | chr4_4:67619639-67619658 | None:intergenic | 30.0% | |
| ! | AACACTCCTAAACCTGATTT+TGG | - | chr4_4:67611365-67611384 | Msa0697560:intron | 35.0% |
| ! | AAAGCACCAAAATCAGGTTT+AGG | + | chr4_4:67611374-67611393 | None:intergenic | 35.0% |
| !!! | ATACTTTTTCTTTGATGGGG+TGG | - | chr4_4:67611560-67611579 | Msa0697560:intron | 35.0% |
| !! | GTTTTTCAGATTTGACGTGA+AGG | - | chr4_4:67612572-67612591 | Msa0697560:intron | 35.0% |
| TCTGGTGAGAACAAGTATTA+TGG | - | chr4_4:67612827-67612846 | Msa0697560:intron | 35.0% | |
| AATATTACACCTTGTGGTAG+AGG | - | chr4_4:67613416-67613435 | Msa0697560:intron | 35.0% | |
| ATATTACACCTTGTGGTAGA+GGG | - | chr4_4:67613417-67613436 | Msa0697560:intron | 35.0% | |
| AGTAATAGTTTCATGATCCC+AGG | - | chr4_4:67613509-67613528 | Msa0697560:intron | 35.0% | |
| ACAATAACAGACTAAGACCT+GGG | + | chr4_4:67613529-67613548 | None:intergenic | 35.0% | |
| !! | TTTGTAGGTACTGATACTAC+AGG | - | chr4_4:67613716-67613735 | Msa0697560:CDS | 35.0% |
| AAAATACCACAAAGTGATGC+TGG | + | chr4_4:67613755-67613774 | None:intergenic | 35.0% | |
| ! | GCATCACTTTGTGGTATTTT+TGG | - | chr4_4:67613755-67613774 | Msa0697560:CDS | 35.0% |
| CATTCTTAAAGCAGATCACA+AGG | + | chr4_4:67613937-67613956 | None:intergenic | 35.0% | |
| ATTACACATAGTGAGGTGAA+CGG | - | chr4_4:67614019-67614038 | Msa0697560:intron | 35.0% | |
| TACTTAATTGCATTGCAGGA+TGG | - | chr4_4:67614103-67614122 | Msa0697560:intron | 35.0% | |
| ! | TGTCTTTTGTGTAGCATCTT+TGG | + | chr4_4:67614244-67614263 | None:intergenic | 35.0% |
| AAAGCTATCGAGAATATGTC+TGG | - | chr4_4:67614279-67614298 | Msa0697560:intron | 35.0% | |
| TATGTCTGGATGTAAGTTTC+TGG | - | chr4_4:67614293-67614312 | Msa0697560:intron | 35.0% | |
| ATGTCTGGATGTAAGTTTCT+GGG | - | chr4_4:67614294-67614313 | Msa0697560:intron | 35.0% | |
| !!! | TCATTTTGGTTTTGCAGATC+AGG | - | chr4_4:67614450-67614469 | Msa0697560:intron | 35.0% |
| TCACAAAGATCCATATGCTT+TGG | + | chr4_4:67614478-67614497 | None:intergenic | 35.0% | |
| CGGTTATGCTTTCAATACAA+AGG | - | chr4_4:67614587-67614606 | Msa0697560:intron | 35.0% | |
| AAGGTAGTAAGGATGAAAGA+GGG | - | chr4_4:67614661-67614680 | Msa0697560:CDS | 35.0% | |
| AAGGTTTGACCCATTTAAAG+AGG | - | chr4_4:67614781-67614800 | Msa0697560:CDS | 35.0% | |
| GCTTCAGTTATCCAGTATAA+TGG | + | chr4_4:67614985-67615004 | None:intergenic | 35.0% | |
| AAGTAATTGTTCAGTTGCTG+TGG | - | chr4_4:67615043-67615062 | Msa0697560:intron | 35.0% | |
| CATAATGGCATATGATAGGT+CGG | + | chr4_4:67615197-67615216 | None:intergenic | 35.0% | |
| AAGGCATAATGGCATATGAT+AGG | + | chr4_4:67615201-67615220 | None:intergenic | 35.0% | |
| !!! | CTATTTTTGCAGTCAGAGTT+AGG | + | chr4_4:67615413-67615432 | None:intergenic | 35.0% |
| TGACTGCAAAAATAGCTCAT+GGG | - | chr4_4:67615418-67615437 | Msa0697560:intron | 35.0% | |
| TAGGGATAAAATAGACCTTG+TGG | + | chr4_4:67615479-67615498 | None:intergenic | 35.0% | |
| !! | CACATTCTAAGATGGTATCA+GGG | + | chr4_4:67615603-67615622 | None:intergenic | 35.0% |
| CAGCCTAAAAGTTAGCTAAA+GGG | - | chr4_4:67615626-67615645 | Msa0697560:intron | 35.0% | |
| ! | CAACCCTTTAGCTAACTTTT+AGG | + | chr4_4:67615632-67615651 | None:intergenic | 35.0% |
| AAAAGTTAGCTAAAGGGTTG+AGG | - | chr4_4:67615632-67615651 | Msa0697560:intron | 35.0% | |
| ! | AATCACTACTTTGTTTCCAG+TGG | - | chr4_4:67615794-67615813 | Msa0697560:intron | 35.0% |
| ATGTGAATCCCATATATCAC+TGG | - | chr4_4:67615857-67615876 | Msa0697560:intron | 35.0% | |
| TGTGAATCCCATATATCACT+GGG | - | chr4_4:67615858-67615877 | Msa0697560:intron | 35.0% | |
| AACTGAAAAATAGACAAGCC+TGG | - | chr4_4:67616409-67616428 | Msa0697560:CDS | 35.0% | |
| ! | AACTTTTGGATCGTCTTGAT+AGG | - | chr4_4:67616460-67616479 | Msa0697560:intron | 35.0% |
| ! | ACTTTTGGATCGTCTTGATA+GGG | - | chr4_4:67616461-67616480 | Msa0697560:intron | 35.0% |
| CTTTGATTCTCATAGTGAAG+TGG | - | chr4_4:67616548-67616567 | Msa0697560:intron | 35.0% | |
| AGTCAAGTTAAAAGAGGTAG+AGG | - | chr4_4:67616635-67616654 | Msa0697560:CDS | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr4_4:67616694-67616713 | Msa0697560:CDS | 35.0% | |
| ! | CAATGAGTTGGATCCAAATT+TGG | - | chr4_4:67616706-67616725 | Msa0697560:CDS | 35.0% |
| GTTTCATTCATCTCAAACCA+TGG | - | chr4_4:67617150-67617169 | Msa0697560:CDS | 35.0% | |
| TCGGTATTTCCATTGATGTT+TGG | + | chr4_4:67617264-67617283 | None:intergenic | 35.0% | |
| ! | CGAACCTTCTGAACTTTTAA+AGG | - | chr4_4:67617281-67617300 | Msa0697560:intron | 35.0% |
| !!! | TTAGGCTTTGTTTTGGAGTT+AGG | - | chr4_4:67617417-67617436 | Msa0697560:intron | 35.0% |
| CCAATCATACTTCGGATTTA+AGG | + | chr4_4:67617778-67617797 | None:intergenic | 35.0% | |
| CCTTAAATCCGAAGTATGAT+TGG | - | chr4_4:67617775-67617794 | Msa0697560:intron | 35.0% | |
| ! | AAGCTATCGAGCTTTTACTA+AGG | + | chr4_4:67617839-67617858 | None:intergenic | 35.0% |
| CAAACTGATGATCTGTTCAT+GGG | - | chr4_4:67618115-67618134 | Msa0697560:intron | 35.0% | |
| AAATCAGGAAAATGTGTGGT+GGG | + | chr4_4:67618435-67618454 | None:intergenic | 35.0% | |
| TGAGAAATCAGGAAAATGTG+TGG | + | chr4_4:67618439-67618458 | None:intergenic | 35.0% | |
| CTGTATGGATAGCTTATTGT+TGG | - | chr4_4:67618475-67618494 | Msa0697560:intron | 35.0% | |
| GAATTCAAGGAAAAGTCACA+AGG | + | chr4_4:67618507-67618526 | None:intergenic | 35.0% | |
| ! | CATCAGCCATACTTTTGAAT+TGG | + | chr4_4:67618810-67618829 | None:intergenic | 35.0% |
| TATATGCTATAAATCGGGGT+TGG | - | chr4_4:67618966-67618985 | Msa0697560:intron | 35.0% | |
| !!! | TTTTTTTTTGCAGGGAAACG+CGG | - | chr4_4:67619021-67619040 | Msa0697560:intron | 35.0% |
| CGGCATTTAAAGAAAAGCAA+TGG | - | chr4_4:67619041-67619060 | Msa0697560:intron | 35.0% | |
| AGGAAAATGGTTTAAGTGTG+AGG | + | chr4_4:67619194-67619213 | None:intergenic | 35.0% | |
| CATAAGTTAACAGGTGAGAA+CGG | + | chr4_4:67619224-67619243 | None:intergenic | 35.0% | |
| TGAAAGCTGCATAAGTTAAC+AGG | + | chr4_4:67619233-67619252 | None:intergenic | 35.0% | |
| GGCAATATTGCTTGATAAGA+AGG | - | chr4_4:67619277-67619296 | Msa0697560:intron | 35.0% | |
| TTGATAAGAAGGTGAGAAGA+TGG | - | chr4_4:67619288-67619307 | Msa0697560:intron | 35.0% | |
| TGATAAGAAGGTGAGAAGAT+GGG | - | chr4_4:67619289-67619308 | Msa0697560:intron | 35.0% | |
| GTAGAACAGTTGGTTATTAG+AGG | + | chr4_4:67619385-67619404 | None:intergenic | 35.0% | |
| ATAACCAACTGTTCTACGAA+TGG | - | chr4_4:67619388-67619407 | Msa0697560:intron | 35.0% | |
| TAACCAACTGTTCTACGAAT+GGG | - | chr4_4:67619389-67619408 | Msa0697560:intron | 35.0% | |
| TTGTAACATCTCAGAACATG+AGG | + | chr4_4:67619420-67619439 | None:intergenic | 35.0% | |
| ATCAGCTGCTATCAGTTAAA+GGG | + | chr4_4:67619484-67619503 | None:intergenic | 35.0% | |
| AATCAGCTGCTATCAGTTAA+AGG | + | chr4_4:67619485-67619504 | None:intergenic | 35.0% | |
| GAAAGTTATACAAATTCGGC+CGG | + | chr4_4:67619596-67619615 | None:intergenic | 35.0% | |
| AATTTCCATGCAGAATGTGA+AGG | - | chr4_4:67619680-67619699 | Msa0697560:five_prime_UTR | 35.0% | |
| AGAATCACTACTTCGGTATA+AGG | - | chr4_4:67619728-67619747 | Msa0697560:five_prime_UTR | 35.0% | |
| GCAATCACTGAAGCTGATTA+AGG | - | chr4_4:67611244-67611263 | Msa0697560:intron | 40.0% | |
| ! | GATTAACCAGAGTTTGGGAT+TGG | + | chr4_4:67611279-67611298 | None:intergenic | 40.0% |
| !! | AATCAGGTTTAGGAGTGTTG+CGG | + | chr4_4:67611364-67611383 | None:intergenic | 40.0% |
| AGAAGAAAGAAGTTGCTTGG+CGG | + | chr4_4:67611444-67611463 | None:intergenic | 40.0% | |
| GAGAGAAGAAAGAAGTTGCT+TGG | + | chr4_4:67611447-67611466 | None:intergenic | 40.0% | |
| !! | AGAAACGAACGTGTCACTTA+TGG | + | chr4_4:67611477-67611496 | None:intergenic | 40.0% |
| ! | ATTTTTATCTGGGTGTGACG+AGG | - | chr4_4:67612535-67612554 | Msa0697560:intron | 40.0% |
| ! | TTGTGTTGGCAAGACTGTTA+TGG | - | chr4_4:67612695-67612714 | Msa0697560:intron | 40.0% |
| !! | GATGAATTCTCTTTTGGGTG+AGG | - | chr4_4:67612717-67612736 | Msa0697560:intron | 40.0% |
| !! | TTGTTGATTTCGCCATTGGT+GGG | - | chr4_4:67612930-67612949 | Msa0697560:intron | 40.0% |
| ! | ACATTCCTGGAAGAGCTTTT+TGG | - | chr4_4:67613186-67613205 | Msa0697560:intron | 40.0% |
| CACAATAACAGACTAAGACC+TGG | + | chr4_4:67613530-67613549 | None:intergenic | 40.0% | |
| AGAATTCCAGCATCACTTTG+TGG | - | chr4_4:67613746-67613765 | Msa0697560:CDS | 40.0% | |
| TGCATTTGGAAGAACTCCAA+TGG | + | chr4_4:67613810-67613829 | None:intergenic | 40.0% | |
| ! | GTGTCTAAGCTTTGTGCATT+TGG | + | chr4_4:67613824-67613843 | None:intergenic | 40.0% |
| TTACACATAGTGAGGTGAAC+GGG | - | chr4_4:67614020-67614039 | Msa0697560:intron | 40.0% | |
| CAGTGGATACCAAAAAGTCA+AGG | - | chr4_4:67614184-67614203 | Msa0697560:intron | 40.0% | |
| ! | TCTAAGGCTTCATGAGCAAT+CGG | - | chr4_4:67614522-67614541 | Msa0697560:intron | 40.0% |
| ! | TGAAAGCATAACCGAAGAGA+GGG | + | chr4_4:67614581-67614600 | None:intergenic | 40.0% |
| ! | TTGAAAGCATAACCGAAGAG+AGG | + | chr4_4:67614582-67614601 | None:intergenic | 40.0% |
| CAAGGTAGTAAGGATGAAAG+AGG | - | chr4_4:67614660-67614679 | Msa0697560:CDS | 40.0% | |
| ATCAAAGTCCTGGCATGATT+GGG | - | chr4_4:67614751-67614770 | Msa0697560:CDS | 40.0% | |
| AGAGTCTCACTCCATTATAC+TGG | - | chr4_4:67614971-67614990 | Msa0697560:intron | 40.0% | |
| CTCACACAAGTGCTTACAAT+AGG | - | chr4_4:67615004-67615023 | Msa0697560:intron | 40.0% | |
| AATTGTTCAGTTGCTGTGGT+CGG | - | chr4_4:67615047-67615066 | Msa0697560:intron | 40.0% | |
| CTGACTGCAAAAATAGCTCA+TGG | - | chr4_4:67615417-67615436 | Msa0697560:intron | 40.0% | |
| GACTGCAAAAATAGCTCATG+GGG | - | chr4_4:67615419-67615438 | Msa0697560:intron | 40.0% | |
| ATCCCTATCTCTAAACAACG+TGG | - | chr4_4:67615492-67615511 | Msa0697560:intron | 40.0% | |
| TCCCTATCTCTAAACAACGT+GGG | - | chr4_4:67615493-67615512 | Msa0697560:intron | 40.0% | |
| TCCCACGTTGTTTAGAGATA+GGG | + | chr4_4:67615497-67615516 | None:intergenic | 40.0% | |
| ATCCCACGTTGTTTAGAGAT+AGG | + | chr4_4:67615498-67615517 | None:intergenic | 40.0% | |
| ! | CACCTTTTGATGTCCATGTT+TGG | - | chr4_4:67615525-67615544 | Msa0697560:intron | 40.0% |
| CTCCAAACATGGACATCAAA+AGG | + | chr4_4:67615530-67615549 | None:intergenic | 40.0% | |
| ATGGTATCAGGGTCTATTCT+AGG | + | chr4_4:67615592-67615611 | None:intergenic | 40.0% | |
| !! | CCACATTCTAAGATGGTATC+AGG | + | chr4_4:67615604-67615623 | None:intergenic | 40.0% |
| CCTGATACCATCTTAGAATG+TGG | - | chr4_4:67615601-67615620 | Msa0697560:intron | 40.0% | |
| ! | CCTTTAGCTAACTTTTAGGC+TGG | + | chr4_4:67615628-67615647 | None:intergenic | 40.0% |
| CCAGCCTAAAAGTTAGCTAA+AGG | - | chr4_4:67615625-67615644 | Msa0697560:intron | 40.0% | |
| ! | GACTGTCTAAAGCCTTGTAA+GGG | - | chr4_4:67615654-67615673 | Msa0697560:intron | 40.0% |
| !! | AGCCTTGTAAGGGCTATTTT+TGG | - | chr4_4:67615664-67615683 | Msa0697560:intron | 40.0% |
| !!! | GCCTTGTAAGGGCTATTTTT+GGG | - | chr4_4:67615665-67615684 | Msa0697560:intron | 40.0% |
| TCCCAAAAATAGCCCTTACA+AGG | + | chr4_4:67615669-67615688 | None:intergenic | 40.0% | |
| GAAAAGAAAGTTTAGGCCAC+TGG | + | chr4_4:67615813-67615832 | None:intergenic | 40.0% | |
| GTGAATCCCATATATCACTG+GGG | - | chr4_4:67615859-67615878 | Msa0697560:intron | 40.0% | |
| AAACATGTTTGGGCACAACA+CGG | + | chr4_4:67616149-67616168 | None:intergenic | 40.0% | |
| CTCATGCCTGACTTTATACA+AGG | + | chr4_4:67616208-67616227 | None:intergenic | 40.0% | |
| CTTTGACAGACAAGAAACGA+TGG | + | chr4_4:67616278-67616297 | None:intergenic | 40.0% | |
| TGGAGGAGTCAAGTTAAAAG+AGG | - | chr4_4:67616629-67616648 | Msa0697560:CDS | 40.0% | |
| CCTGTTGGACAATCAAAACA+AGG | + | chr4_4:67616847-67616866 | None:intergenic | 40.0% | |
| !!! | CCTTGTTTTGATTGTCCAAC+AGG | - | chr4_4:67616844-67616863 | Msa0697560:intron | 40.0% |
| !!! | GTTTTGATTGTCCAACAGGA+TGG | - | chr4_4:67616848-67616867 | Msa0697560:intron | 40.0% |
| CTAATATTCCACCATCCTGT+TGG | + | chr4_4:67616862-67616881 | None:intergenic | 40.0% | |
| TAGTATGTCTGGTTGTTGTC+AGG | - | chr4_4:67616979-67616998 | Msa0697560:intron | 40.0% | |
| TTCCAGGTTACGATTCCTTT+AGG | - | chr4_4:67617102-67617121 | Msa0697560:CDS | 40.0% | |
| ATCCTAAAGGAATCGTAACC+TGG | + | chr4_4:67617107-67617126 | None:intergenic | 40.0% | |
| TCATTCATCTCAAACCATGG+AGG | - | chr4_4:67617153-67617172 | Msa0697560:CDS | 40.0% | |
| GAAGAAATTTGTCACCTCCA+TGG | + | chr4_4:67617170-67617189 | None:intergenic | 40.0% | |
| GTAAAGCCATGATGTGTAGT+TGG | - | chr4_4:67617376-67617395 | Msa0697560:intron | 40.0% | |
| CAGAATCCAACTACACATCA+TGG | + | chr4_4:67617385-67617404 | None:intergenic | 40.0% | |
| TGTAGTTGGATTCTGCTTGA+TGG | - | chr4_4:67617390-67617409 | Msa0697560:intron | 40.0% | |
| GTAGTTGGATTCTGCTTGAT+GGG | - | chr4_4:67617391-67617410 | Msa0697560:intron | 40.0% | |
| TAGTTGGATTCTGCTTGATG+GGG | - | chr4_4:67617392-67617411 | Msa0697560:intron | 40.0% | |
| ! | ATTCTGCTTGATGGGGTTTT+AGG | - | chr4_4:67617399-67617418 | Msa0697560:intron | 40.0% |
| !!! | TGGGGTTTTAGGCTTTGTTT+TGG | - | chr4_4:67617410-67617429 | Msa0697560:intron | 40.0% |
| !!! | GCTTTGTTTTGGAGTTAGGA+GGG | - | chr4_4:67617421-67617440 | Msa0697560:intron | 40.0% |
| GAGTTAGGAGGGAAATGAAA+GGG | - | chr4_4:67617432-67617451 | Msa0697560:intron | 40.0% | |
| TCATTTAAAGGGGAGAGAGA+GGG | + | chr4_4:67617695-67617714 | None:intergenic | 40.0% | |
| ATCATTTAAAGGGGAGAGAG+AGG | + | chr4_4:67617696-67617715 | None:intergenic | 40.0% | |
| AAAAGCTCGATAGCTTAGCT+TGG | - | chr4_4:67617843-67617862 | Msa0697560:intron | 40.0% | |
| AAAGCTCGATAGCTTAGCTT+GGG | - | chr4_4:67617844-67617863 | Msa0697560:intron | 40.0% | |
| GCAAACTGATGATCTGTTCA+TGG | - | chr4_4:67618114-67618133 | Msa0697560:intron | 40.0% | |
| ATTCTGATATGCTGTTGCCT+AGG | - | chr4_4:67618193-67618212 | Msa0697560:CDS | 40.0% | |
| ! | ATCTATAGAAGTGCAGGTAC+AGG | + | chr4_4:67618337-67618356 | None:intergenic | 40.0% |
| ! | CACTGTATCTATAGAAGTGC+AGG | + | chr4_4:67618343-67618362 | None:intergenic | 40.0% |
| CTGCACTTCTATAGATACAG+TGG | - | chr4_4:67618341-67618360 | Msa0697560:intron | 40.0% | |
| ! | TCTCTGAACTTTGGGAAGAA+TGG | + | chr4_4:67618374-67618393 | None:intergenic | 40.0% |
| ATTCTTCCCAAAGTTCAGAG+AGG | - | chr4_4:67618373-67618392 | Msa0697560:intron | 40.0% | |
| GAAATCAGGAAAATGTGTGG+TGG | + | chr4_4:67618436-67618455 | None:intergenic | 40.0% | |
| ! | GGATAGCTTATTGTTGGTCT+TGG | - | chr4_4:67618481-67618500 | Msa0697560:intron | 40.0% |
| TCAGAAGAGAGCTGAATTCA+AGG | + | chr4_4:67618520-67618539 | None:intergenic | 40.0% | |
| !! | CTTCTGAAATTCGCACTTGA+CGG | - | chr4_4:67618533-67618552 | Msa0697560:intron | 40.0% |
| AATCCAAGTGTACTTCGAGT+GGG | + | chr4_4:67618747-67618766 | None:intergenic | 40.0% | |
| AAATCCAAGTGTACTTCGAG+TGG | + | chr4_4:67618748-67618767 | None:intergenic | 40.0% | |
| TAAGGCAGTCACTCACTATA+CGG | - | chr4_4:67619066-67619085 | Msa0697560:intron | 40.0% | |
| CTTAAAGCTAGGATGGTATG+AGG | - | chr4_4:67619147-67619166 | Msa0697560:intron | 40.0% | |
| AGAAGATGGGATTATGACAG+TGG | - | chr4_4:67619302-67619321 | Msa0697560:intron | 40.0% | |
| AACCAACTGTTCTACGAATG+GGG | - | chr4_4:67619390-67619409 | Msa0697560:intron | 40.0% | |
| !!! | CTCTGTGTTATTTTGAGGTG+GGG | + | chr4_4:67619452-67619471 | None:intergenic | 40.0% |
| !!! | GCTCTGTGTTATTTTGAGGT+GGG | + | chr4_4:67619453-67619472 | None:intergenic | 40.0% |
| !!! | AGCTCTGTGTTATTTTGAGG+TGG | + | chr4_4:67619454-67619473 | None:intergenic | 40.0% |
| ACCTCAAAATAACACAGAGC+TGG | - | chr4_4:67619453-67619472 | Msa0697560:CDS | 40.0% | |
| ATATGCCTTCACATTCTGCA+TGG | + | chr4_4:67619688-67619707 | None:intergenic | 40.0% | |
| CTGCTAGAGAATCACTACTT+CGG | - | chr4_4:67619721-67619740 | Msa0697560:five_prime_UTR | 40.0% | |
| ATCACTACTTCGGTATAAGG+AGG | - | chr4_4:67619731-67619750 | Msa0697560:five_prime_UTR | 40.0% | |
| CCGACGATTAACCAGAGTTT+GGG | + | chr4_4:67611284-67611303 | None:intergenic | 45.0% | |
| CCCAAACTCTGGTTAATCGT+CGG | - | chr4_4:67611281-67611300 | Msa0697560:intron | 45.0% | |
| TCCGACGATTAACCAGAGTT+TGG | + | chr4_4:67611285-67611304 | None:intergenic | 45.0% | |
| CTCTGGTTAATCGTCGGAAT+TGG | - | chr4_4:67611287-67611306 | Msa0697560:intron | 45.0% | |
| TGTGACGAGGTTTCTGTTGT+TGG | - | chr4_4:67612548-67612567 | Msa0697560:intron | 45.0% | |
| GTGACGAGGTTTCTGTTGTT+GGG | - | chr4_4:67612549-67612568 | Msa0697560:intron | 45.0% | |
| TGACGAGGTTTCTGTTGTTG+GGG | - | chr4_4:67612550-67612569 | Msa0697560:intron | 45.0% | |
| TTCAATGGGGCTACTTGTGT+TGG | - | chr4_4:67612681-67612700 | Msa0697560:intron | 45.0% | |
| ! | GATGGCATCTGAGGATTAGT+TGG | + | chr4_4:67612857-67612876 | None:intergenic | 45.0% |
| !! | GGACTTGTTGATTTCGCCAT+TGG | - | chr4_4:67612926-67612945 | Msa0697560:intron | 45.0% |
| !! | CTTGTTGATTTCGCCATTGG+TGG | - | chr4_4:67612929-67612948 | Msa0697560:intron | 45.0% |
| TACAGCCAAAAAGCTCTTCC+AGG | + | chr4_4:67613194-67613213 | None:intergenic | 45.0% | |
| ! | TGTCATTTCCCTCTACCACA+AGG | + | chr4_4:67613428-67613447 | None:intergenic | 45.0% |
| !!! | TTTGGTTTTAGACCCTCCCA+CGG | - | chr4_4:67613773-67613792 | Msa0697560:intron | 45.0% |
| AATGGTAGATATAGCCCCGT+GGG | + | chr4_4:67613792-67613811 | None:intergenic | 45.0% | |
| GCACAAAGCTTAGACACCAT+TGG | - | chr4_4:67613827-67613846 | Msa0697560:intron | 45.0% | |
| AAGCATGTCCAACACGATGT+AGG | + | chr4_4:67614149-67614168 | None:intergenic | 45.0% | |
| AGATCAGGCTCCAAAGCATA+TGG | - | chr4_4:67614465-67614484 | Msa0697560:intron | 45.0% | |
| !! | CTAAAAAGGTGCCCAGTCTA+AGG | - | chr4_4:67614506-67614525 | Msa0697560:intron | 45.0% |
| TGCTCATGAAGCCTTAGACT+GGG | + | chr4_4:67614520-67614539 | None:intergenic | 45.0% | |
| TTGCTCATGAAGCCTTAGAC+TGG | + | chr4_4:67614521-67614540 | None:intergenic | 45.0% | |
| CAATCATGCCAGGACTTTGA+TGG | + | chr4_4:67614752-67614771 | None:intergenic | 45.0% | |
| CATCAAAGTCCTGGCATGAT+TGG | - | chr4_4:67614750-67614769 | Msa0697560:CDS | 45.0% | |
| AGTACTCTTCACTCAGCAAG+TGG | + | chr4_4:67615134-67615153 | None:intergenic | 45.0% | |
| CAAAAATAGCTCATGGGGTG+AGG | - | chr4_4:67615424-67615443 | Msa0697560:intron | 45.0% | |
| GATGTCCATGTTTGGAGATC+TGG | - | chr4_4:67615533-67615552 | Msa0697560:intron | 45.0% | |
| AAGCTCCAGATCTCCAAACA+TGG | + | chr4_4:67615541-67615560 | None:intergenic | 45.0% | |
| ! | TCTGGAGCTTAGAGAAATGC+AGG | - | chr4_4:67615551-67615570 | Msa0697560:intron | 45.0% |
| ! | GGACTGTCTAAAGCCTTGTA+AGG | - | chr4_4:67615653-67615672 | Msa0697560:intron | 45.0% |
| AGGCATCCCCAGTGATATAT+GGG | + | chr4_4:67615868-67615887 | None:intergenic | 45.0% | |
| GGGTTAAATCAGTCAAACGC+AGG | - | chr4_4:67616118-67616137 | Msa0697560:intron | 45.0% | |
| ATATTGTCACTCTGGACTCC+AGG | + | chr4_4:67616430-67616449 | None:intergenic | 45.0% | |
| AAAGAGGTAGAGGAAGACCT+AGG | - | chr4_4:67616645-67616664 | Msa0697560:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr4_4:67616775-67616794 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr4_4:67616776-67616795 | None:intergenic | 45.0% |
| AAGGAGATAGTAGGGTAGCA+TGG | + | chr4_4:67616828-67616847 | None:intergenic | 45.0% | |
| TTGATTGTCCAACAGGATGG+TGG | - | chr4_4:67616851-67616870 | Msa0697560:intron | 45.0% | |
| TCCAGCATTGCTAGTATGTC+TGG | - | chr4_4:67616968-67616987 | Msa0697560:intron | 45.0% | |
| ACCAGACATACTAGCAATGC+TGG | + | chr4_4:67616972-67616991 | None:intergenic | 45.0% | |
| GTATACAGCTCTTCAAGAGC+AGG | - | chr4_4:67617209-67617228 | Msa0697560:intron | 45.0% | |
| !!! | GGCTTTGTTTTGGAGTTAGG+AGG | - | chr4_4:67617420-67617439 | Msa0697560:intron | 45.0% |
| GGAGTTAGGAGGGAAATGAA+AGG | - | chr4_4:67617431-67617450 | Msa0697560:intron | 45.0% | |
| TTAGGAGGGAAATGAAAGGG+TGG | - | chr4_4:67617435-67617454 | Msa0697560:intron | 45.0% | |
| TAGGAGGGAAATGAAAGGGT+GGG | - | chr4_4:67617436-67617455 | Msa0697560:intron | 45.0% | |
| ! | GAAATGAAAGGGTGGGCTTT+GGG | - | chr4_4:67617443-67617462 | Msa0697560:intron | 45.0% |
| ! | AAATGAAAGGGTGGGCTTTG+GGG | - | chr4_4:67617444-67617463 | Msa0697560:intron | 45.0% |
| AAGGAATGTGGAACGAGAAG+TGG | - | chr4_4:67617469-67617488 | Msa0697560:intron | 45.0% | |
| AATAAACCCCCCATGCAAAG+TGG | + | chr4_4:67617511-67617530 | None:intergenic | 45.0% | |
| ! | ACGTATTGCGAGAGGGTTTT+TGG | - | chr4_4:67617574-67617593 | Msa0697560:intron | 45.0% |
| !! | TATTGCGAGAGGGTTTTTGG+AGG | - | chr4_4:67617577-67617596 | Msa0697560:intron | 45.0% |
| !! | ATTGCGAGAGGGTTTTTGGA+GGG | - | chr4_4:67617578-67617597 | Msa0697560:intron | 45.0% |
| ATTTAAAGGGGAGAGAGAGG+GGG | + | chr4_4:67617693-67617712 | None:intergenic | 45.0% | |
| CATTTAAAGGGGAGAGAGAG+GGG | + | chr4_4:67617694-67617713 | None:intergenic | 45.0% | |
| !! | CTAACTAGGGGCACTAGTTA+AGG | - | chr4_4:67617928-67617947 | Msa0697560:intron | 45.0% |
| GCTTTCCTTAACTAATGCCC+CGG | - | chr4_4:67618043-67618062 | Msa0697560:CDS | 45.0% | |
| !! | GAGAAGGTATTCTGTGCAAC+AGG | + | chr4_4:67618232-67618251 | None:intergenic | 45.0% |
| ACGACACAAAGCGTAAGAGA+AGG | + | chr4_4:67618248-67618267 | None:intergenic | 45.0% | |
| GTGGGTAAGTGTGAGAAATC+AGG | + | chr4_4:67618450-67618469 | None:intergenic | 45.0% | |
| !! | ACTTACCCACCGATTCTGTA+TGG | - | chr4_4:67618460-67618479 | Msa0697560:intron | 45.0% |
| GCTATCCATACAGAATCGGT+GGG | + | chr4_4:67618468-67618487 | None:intergenic | 45.0% | |
| AGCTATCCATACAGAATCGG+TGG | + | chr4_4:67618469-67618488 | None:intergenic | 45.0% | |
| AGTCCGCTTGAAGACTCAAA+GGG | + | chr4_4:67618698-67618717 | None:intergenic | 45.0% | |
| AAGTCCGCTTGAAGACTCAA+AGG | + | chr4_4:67618699-67618718 | None:intergenic | 45.0% | |
| AAGGCAGTCACTCACTATAC+GGG | - | chr4_4:67619067-67619086 | Msa0697560:intron | 45.0% | |
| ACGGGGGCTATTGAATTGAA+TGG | - | chr4_4:67619085-67619104 | Msa0697560:intron | 45.0% | |
| CGGGGGCTATTGAATTGAAT+GGG | - | chr4_4:67619086-67619105 | Msa0697560:intron | 45.0% | |
| CTGCTTGCTTAAAGCTAGGA+TGG | - | chr4_4:67619140-67619159 | Msa0697560:intron | 45.0% | |
| TGTGAGGATACTTGACAGAC+AGG | + | chr4_4:67619178-67619197 | None:intergenic | 45.0% | |
| GAACGGCAATCACAGGAAAA+TGG | + | chr4_4:67619207-67619226 | None:intergenic | 45.0% | |
| CTTATGCAGCTTTCAGCTAG+CGG | - | chr4_4:67619238-67619257 | Msa0697560:intron | 45.0% | |
| !!! | TGTTATTTTGAGGTGGGGAG+GGG | + | chr4_4:67619447-67619466 | None:intergenic | 45.0% |
| !!! | GTGTTATTTTGAGGTGGGGA+GGG | + | chr4_4:67619448-67619467 | None:intergenic | 45.0% |
| !!! | TGTGTTATTTTGAGGTGGGG+AGG | + | chr4_4:67619449-67619468 | None:intergenic | 45.0% |
| !!! | GCCAGCTCTGTGTTATTTTG+AGG | + | chr4_4:67619457-67619476 | None:intergenic | 45.0% |
| CAGCTTCAGTGATTGCGACA+TGG | + | chr4_4:67611240-67611259 | None:intergenic | 50.0% | |
| ACGCTTCCAATCCCAAACTC+TGG | - | chr4_4:67611270-67611289 | Msa0697560:intron | 50.0% | |
| TGACGTGAAGGGCTATGTGA+CGG | - | chr4_4:67612584-67612603 | Msa0697560:intron | 50.0% | |
| TGACCGCTCTGCTCTTCAAT+GGG | - | chr4_4:67612667-67612686 | Msa0697560:intron | 50.0% | |
| TTCAGCAGTAGCAGTTGCTG+CGG | - | chr4_4:67612904-67612923 | Msa0697560:intron | 50.0% | |
| CAGCTATTGAGGCCACAACA+TGG | + | chr4_4:67613641-67613660 | None:intergenic | 50.0% | |
| !!! | TTGGTTTTAGACCCTCCCAC+GGG | - | chr4_4:67613774-67613793 | Msa0697560:intron | 50.0% |
| CAATGGTAGATATAGCCCCG+TGG | + | chr4_4:67613793-67613812 | None:intergenic | 50.0% | |
| CACGGGGCTATATCTACCAT+TGG | - | chr4_4:67613791-67613810 | Msa0697560:intron | 50.0% | |
| ATGTAGGACAGATGGATCGC+GGG | + | chr4_4:67614133-67614152 | None:intergenic | 50.0% | |
| GATGTAGGACAGATGGATCG+CGG | + | chr4_4:67614134-67614153 | None:intergenic | 50.0% | |
| CCAACACGATGTAGGACAGA+TGG | + | chr4_4:67614141-67614160 | None:intergenic | 50.0% | |
| CCATCTGTCCTACATCGTGT+TGG | - | chr4_4:67614138-67614157 | Msa0697560:intron | 50.0% | |
| CAATCGGCACCCCAACAAAA+TGG | - | chr4_4:67614538-67614557 | Msa0697560:intron | 50.0% | |
| ACCTGATGCCATCAAAGTCC+TGG | - | chr4_4:67614741-67614760 | Msa0697560:CDS | 50.0% | |
| TTCCTAGACCCAATCATGCC+AGG | + | chr4_4:67614762-67614781 | None:intergenic | 50.0% | |
| GGCATGATTGGGTCTAGGAA+AGG | - | chr4_4:67614762-67614781 | Msa0697560:CDS | 50.0% | |
| TTCACTCAGCAAGTGGTGGT+GGG | + | chr4_4:67615127-67615146 | None:intergenic | 50.0% | |
| ACTCTTCACTCAGCAAGTGG+TGG | + | chr4_4:67615131-67615150 | None:intergenic | 50.0% | |
| GGAGCTTAGAGAAATGCAGG+TGG | - | chr4_4:67615554-67615573 | Msa0697560:intron | 50.0% | |
| ! | GGCTGGTCCACATTCTAAGA+TGG | + | chr4_4:67615611-67615630 | None:intergenic | 50.0% |
| CAGGCATCCCCAGTGATATA+TGG | + | chr4_4:67615869-67615888 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr4_4:67616771-67616790 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr4_4:67616777-67616796 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr4_4:67616774-67616793 | Msa0697560:intron | 50.0% | |
| !! | AGTGGACTGTCTGCTACAGA+GGG | + | chr4_4:67616890-67616909 | None:intergenic | 50.0% |
| !! | TAGTGGACTGTCTGCTACAG+AGG | + | chr4_4:67616891-67616910 | None:intergenic | 50.0% |
| ! | GGAAATGAAAGGGTGGGCTT+TGG | - | chr4_4:67617442-67617461 | Msa0697560:intron | 50.0% |
| !! | GGCTTTGGGGAAAAGGAATG+TGG | - | chr4_4:67617457-67617476 | Msa0697560:intron | 50.0% |
| !! | AGAGGGTTTTTGGAGGGCTT+AGG | - | chr4_4:67617584-67617603 | Msa0697560:intron | 50.0% |
| TTTAAAGGGGAGAGAGAGGG+GGG | + | chr4_4:67617692-67617711 | None:intergenic | 50.0% | |
| TTCCTTAACTAATGCCCCGG+AGG | - | chr4_4:67618046-67618065 | Msa0697560:CDS | 50.0% | |
| TCATGCTAACTAGTGCCTCC+GGG | + | chr4_4:67618064-67618083 | None:intergenic | 50.0% | |
| GTCATGCTAACTAGTGCCTC+CGG | + | chr4_4:67618065-67618084 | None:intergenic | 50.0% | |
| CAGGTTGCATAGTCTGACCT+AGG | + | chr4_4:67618213-67618232 | None:intergenic | 50.0% | |
| TCCGCTTGAAGACTCAAAGG+GGG | + | chr4_4:67618696-67618715 | None:intergenic | 50.0% | |
| GTCCGCTTGAAGACTCAAAG+GGG | + | chr4_4:67618697-67618716 | None:intergenic | 50.0% | |
| CTTCGAGTGGGCATCAACAA+TGG | + | chr4_4:67618735-67618754 | None:intergenic | 50.0% | |
| ATGCCCACTCGAAGTACACT+TGG | - | chr4_4:67618741-67618760 | Msa0697560:intron | 50.0% | |
| AGGCAGTCACTCACTATACG+GGG | - | chr4_4:67619068-67619087 | Msa0697560:intron | 50.0% | |
| ! | GCTTTAAGCAAGCAGCTGCT+CGG | + | chr4_4:67619135-67619154 | None:intergenic | 50.0% |
| GCAGCTGCTTGCTTAAAGCT+AGG | - | chr4_4:67619136-67619155 | Msa0697560:intron | 50.0% | |
| AGCGGAAGAAGACTGCAGTA+AGG | - | chr4_4:67619256-67619275 | Msa0697560:intron | 50.0% | |
| TGGGATTATGACAGTGGCCA+TGG | - | chr4_4:67619308-67619327 | Msa0697560:intron | 50.0% | |
| GACCCCATTCGTAGAACAGT+TGG | + | chr4_4:67619395-67619414 | None:intergenic | 50.0% | |
| CGCACTATTCTCAGTACAGC+TGG | + | chr4_4:67619659-67619678 | None:intergenic | 50.0% | |
| ! | GTGAAGGCATATCTGAGACG+TGG | - | chr4_4:67619696-67619715 | Msa0697560:five_prime_UTR | 50.0% |
| CGGTATAAGGAGGCTCTTGA+AGG | - | chr4_4:67619741-67619760 | Msa0697560:five_prime_UTR | 50.0% | |
| ATCGTCGGAATTGGACTCGC+CGG | - | chr4_4:67611296-67611315 | Msa0697560:intron | 55.0% | |
| TGTTGCGGCAGCGTCTTCTA+CGG | + | chr4_4:67611349-67611368 | None:intergenic | 55.0% | |
| GAAAGAAGTTGCTTGGCGGC+AGG | + | chr4_4:67611440-67611459 | None:intergenic | 55.0% | |
| GACGTGAAGGGCTATGTGAC+GGG | - | chr4_4:67612585-67612604 | Msa0697560:intron | 55.0% | |
| ACGTGAAGGGCTATGTGACG+GGG | - | chr4_4:67612586-67612605 | Msa0697560:intron | 55.0% | |
| ! | AAGGGCTATGTGACGGGGTT+TGG | - | chr4_4:67612591-67612610 | Msa0697560:intron | 55.0% |
| CGGGGTTTGGAAATCCTGTG+TGG | - | chr4_4:67612604-67612623 | Msa0697560:intron | 55.0% | |
| TCGTGCGTTCTCTTCCACAC+AGG | + | chr4_4:67612621-67612640 | None:intergenic | 55.0% | |
| TGTGTGGAAGAGAACGCACG+AGG | - | chr4_4:67612620-67612639 | Msa0697560:intron | 55.0% | |
| GTGACCGCTCTGCTCTTCAA+TGG | - | chr4_4:67612666-67612685 | Msa0697560:intron | 55.0% | |
| GACCGCTCTGCTCTTCAATG+GGG | - | chr4_4:67612668-67612687 | Msa0697560:intron | 55.0% | |
| AGCCCCATTGAAGAGCAGAG+CGG | + | chr4_4:67612673-67612692 | None:intergenic | 55.0% | |
| TCAGATGCCATCGTGTGTCC+CGG | - | chr4_4:67612865-67612884 | Msa0697560:intron | 55.0% | |
| AACCACTAGAAGACCCTCCC+GGG | + | chr4_4:67612886-67612905 | None:intergenic | 55.0% | |
| GAACCACTAGAAGACCCTCC+CGG | + | chr4_4:67612887-67612906 | None:intergenic | 55.0% | |
| TCAGCAGTAGCAGTTGCTGC+GGG | - | chr4_4:67612905-67612924 | Msa0697560:intron | 55.0% | |
| !! | TCGCCATTGGTGGGTTTGCA+TGG | - | chr4_4:67612939-67612958 | Msa0697560:intron | 55.0% |
| GTGCCATGCAAACCCACCAA+TGG | + | chr4_4:67612945-67612964 | None:intergenic | 55.0% | |
| !!! | TGGTTTTAGACCCTCCCACG+GGG | - | chr4_4:67613775-67613794 | Msa0697560:intron | 55.0% |
| GTAGATATAGCCCCGTGGGA+GGG | + | chr4_4:67613788-67613807 | None:intergenic | 55.0% | |
| ! | GCCAGGACTTTGATGGCATC+AGG | + | chr4_4:67614745-67614764 | None:intergenic | 55.0% |
| GTCCTGGCATGATTGGGTCT+AGG | - | chr4_4:67614757-67614776 | Msa0697560:CDS | 55.0% | |
| ! | TCACTCAGCAAGTGGTGGTG+GGG | + | chr4_4:67615126-67615145 | None:intergenic | 55.0% |
| CTTCACTCAGCAAGTGGTGG+TGG | + | chr4_4:67615128-67615147 | None:intergenic | 55.0% | |
| ATAGCTCATGGGGTGAGGAC+TGG | - | chr4_4:67615429-67615448 | Msa0697560:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr4_4:67616763-67616782 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr4_4:67616762-67616781 | Msa0697560:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr4_4:67616763-67616782 | Msa0697560:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr4_4:67616769-67616788 | Msa0697560:intron | 55.0% | |
| ! | CTTCAAGAGCAGGCTAGCTC+TGG | - | chr4_4:67617219-67617238 | Msa0697560:intron | 55.0% |
| !! | AAGGGTGGGCTTTGGGGAAA+AGG | - | chr4_4:67617450-67617469 | Msa0697560:intron | 55.0% |
| ! | TGCCTCCGGGGCATTAGTTA+AGG | + | chr4_4:67618051-67618070 | None:intergenic | 55.0% |
| CATGCTAACTAGTGCCTCCG+GGG | + | chr4_4:67618063-67618082 | None:intergenic | 55.0% | |
| AGTGCAGGTACAGGAGCGAT+TGG | + | chr4_4:67618328-67618347 | None:intergenic | 55.0% | |
| GCCCCCTTTGAGTCTTCAAG+CGG | - | chr4_4:67618692-67618711 | Msa0697560:intron | 55.0% | |
| GGCAGTCACTCACTATACGG+GGG | - | chr4_4:67619069-67619088 | Msa0697560:intron | 55.0% | |
| CAGGTGAGAACGGCAATCAC+AGG | + | chr4_4:67619214-67619233 | None:intergenic | 55.0% | |
| GCGTCTTCTACGGCGAGTCT+CGG | + | chr4_4:67611339-67611358 | None:intergenic | 60.0% | |
| GGAGGAGGAGGCTGAGGAAA+GGG | + | chr4_4:67611419-67611438 | None:intergenic | 60.0% | |
| AGGAGGAGGAGGCTGAGGAA+AGG | + | chr4_4:67611420-67611439 | None:intergenic | 60.0% | |
| AGAAGTTGCTTGGCGGCAGG+AGG | + | chr4_4:67611437-67611456 | None:intergenic | 60.0% | |
| GTGGAAGAGAACGCACGAGG+AGG | - | chr4_4:67612623-67612642 | Msa0697560:intron | 60.0% | |
| GAAGAGAACGCACGAGGAGG+CGG | - | chr4_4:67612626-67612645 | Msa0697560:intron | 60.0% | |
| GGGACACACGATGGCATCTG+AGG | + | chr4_4:67612866-67612885 | None:intergenic | 60.0% | |
| CAGATGCCATCGTGTGTCCC+GGG | - | chr4_4:67612866-67612885 | Msa0697560:intron | 60.0% | |
| GGTAGATATAGCCCCGTGGG+AGG | + | chr4_4:67613789-67613808 | None:intergenic | 60.0% | |
| !! | ACTCAGCAAGTGGTGGTGGG+GGG | + | chr4_4:67615124-67615143 | None:intergenic | 60.0% |
| !! | CACTCAGCAAGTGGTGGTGG+GGG | + | chr4_4:67615125-67615144 | None:intergenic | 60.0% |
| TGACCGCGCTCCACTTTGCA+TGG | - | chr4_4:67617498-67617517 | Msa0697560:intron | 60.0% | |
| GACCGCGCTCCACTTTGCAT+GGG | - | chr4_4:67617499-67617518 | Msa0697560:intron | 60.0% | |
| ACCGCGCTCCACTTTGCATG+GGG | - | chr4_4:67617500-67617519 | Msa0697560:intron | 60.0% | |
| GTCGGAATTGGACTCGCCGG+CGG | - | chr4_4:67611299-67611318 | Msa0697560:intron | 65.0% | |
| TCGGAATTGGACTCGCCGGC+GGG | - | chr4_4:67611300-67611319 | Msa0697560:intron | 65.0% | |
| GGAGAGAACGACGATCCCGC+CGG | + | chr4_4:67611318-67611337 | None:intergenic | 65.0% | |
| AGTTGCTTGGCGGCAGGAGG+AGG | + | chr4_4:67611434-67611453 | None:intergenic | 65.0% | |
| GGAGGCGGAGAAGACTGCGA+TGG | - | chr4_4:67612641-67612660 | Msa0697560:intron | 65.0% | |
| GGCGGAGAAGACTGCGATGG+TGG | - | chr4_4:67612644-67612663 | Msa0697560:intron | 65.0% | |
| ATGCCATCGTGTGTCCCGGG+AGG | - | chr4_4:67612869-67612888 | Msa0697560:intron | 65.0% | |
| TGCCATCGTGTGTCCCGGGA+GGG | - | chr4_4:67612870-67612889 | Msa0697560:intron | 65.0% | |
| GTCCCGGGAGGGTCTTCTAG+TGG | - | chr4_4:67612881-67612900 | Msa0697560:intron | 65.0% | |
| TCACTGGGGATGCCTGTGCC+TGG | - | chr4_4:67615873-67615892 | Msa0697560:intron | 65.0% | |
| CCCCCATGCAAAGTGGAGCG+CGG | + | chr4_4:67617504-67617523 | None:intergenic | 65.0% | |
| CCGCGCTCCACTTTGCATGG+GGG | - | chr4_4:67617501-67617520 | Msa0697560:intron | 65.0% | |
| CGCGCTCCACTTTGCATGGG+GGG | - | chr4_4:67617502-67617521 | Msa0697560:intron | 65.0% | |
| AAGGGGAGAGAGAGGGGGGT+GGG | + | chr4_4:67617688-67617707 | None:intergenic | 65.0% | |
| AAAGGGGAGAGAGAGGGGGG+TGG | + | chr4_4:67617689-67617708 | None:intergenic | 65.0% | |
| TGCTTGGCGGCAGGAGGAGG+AGG | + | chr4_4:67611431-67611450 | None:intergenic | 70.0% | |
| GACCCTCCCGGGACACACGA+TGG | + | chr4_4:67612875-67612894 | None:intergenic | 70.0% | |
| AGGGGAGAGAGAGGGGGGTG+GGG | + | chr4_4:67617687-67617706 | None:intergenic | 70.0% | |
| GCGGCAGGAGGAGGAGGCTG+AGG | + | chr4_4:67611425-67611444 | None:intergenic | 75.0% | |
| AGAGAGGGGGGTGGGGGGGT+GGG | + | chr4_4:67617680-67617699 | None:intergenic | 75.0% | |
| GGAGAGAGAGGGGGGTGGGG+GGG | + | chr4_4:67617684-67617703 | None:intergenic | 75.0% | |
| GGGAGAGAGAGGGGGGTGGG+GGG | + | chr4_4:67617685-67617704 | None:intergenic | 75.0% | |
| GGGGAGAGAGAGGGGGGTGG+GGG | + | chr4_4:67617686-67617705 | None:intergenic | 75.0% | |
| ! | GAGAGGGGGGTGGGGGGGTG+GGG | + | chr4_4:67617679-67617698 | None:intergenic | 80.0% |
| ! | GAGAGAGGGGGGTGGGGGGG+TGG | + | chr4_4:67617681-67617700 | None:intergenic | 80.0% |
| ! | AGGGGGGTGGGGGGGTGGGG+AGG | + | chr4_4:67617676-67617695 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 67611126 | 67619773 | 67611126 | ID=Msa0697560;Name=Msa0697560 |
| chr4_4 | mRNA | 67611126 | 67619773 | 67611126 | ID=Msa0697560-mRNA-1;Parent=Msa0697560;Name=Msa0697560-mRNA-1;_AED=0.07;_eAED=0.07;_QI=113|1|0.91|1|1|1|12|0|580 |
| chr4_4 | exon | 67611126 | 67611206 | 67611126 | ID=Msa0697560-mRNA-1:exon:19974;Parent=Msa0697560-mRNA-1 |
| chr4_4 | exon | 67611601 | 67611652 | 67611601 | ID=Msa0697560-mRNA-1:exon:19973;Parent=Msa0697560-mRNA-1 |
| chr4_4 | exon | 67611738 | 67611865 | 67611738 | ID=Msa0697560-mRNA-1:exon:19972;Parent=Msa0697560-mRNA-1 |
| chr4_4 | exon | 67613591 | 67613791 | 67613591 | ID=Msa0697560-mRNA-1:exon:19971;Parent=Msa0697560-mRNA-1 |
| chr4_4 | exon | 67613899 | 67614033 | 67613899 | ID=Msa0697560-mRNA-1:exon:19970;Parent=Msa0697560-mRNA-1 |
| chr4_4 | exon | 67614642 | 67614810 | 67614642 | ID=Msa0697560-mRNA-1:exon:19969;Parent=Msa0697560-mRNA-1 |
| chr4_4 | exon | 67616291 | 67616432 | 67616291 | ID=Msa0697560-mRNA-1:exon:19968;Parent=Msa0697560-mRNA-1 |
| chr4_4 | exon | 67616596 | 67616778 | 67616596 | ID=Msa0697560-mRNA-1:exon:19967;Parent=Msa0697560-mRNA-1 |
| chr4_4 | exon | 67617051 | 67617176 | 67617051 | ID=Msa0697560-mRNA-1:exon:19966;Parent=Msa0697560-mRNA-1 |
| chr4_4 | exon | 67617952 | 67618076 | 67617952 | ID=Msa0697560-mRNA-1:exon:19965;Parent=Msa0697560-mRNA-1 |
| chr4_4 | exon | 67618166 | 67618318 | 67618166 | ID=Msa0697560-mRNA-1:exon:19964;Parent=Msa0697560-mRNA-1 |
| chr4_4 | exon | 67619413 | 67619773 | 67619413 | ID=Msa0697560-mRNA-1:exon:19963;Parent=Msa0697560-mRNA-1 |
| chr4_4 | five_prime_UTR | 67619661 | 67619773 | 67619661 | ID=Msa0697560-mRNA-1:five_prime_utr;Parent=Msa0697560-mRNA-1 |
| chr4_4 | CDS | 67619413 | 67619660 | 67619413 | ID=Msa0697560-mRNA-1:cds;Parent=Msa0697560-mRNA-1 |
| chr4_4 | CDS | 67618166 | 67618318 | 67618166 | ID=Msa0697560-mRNA-1:cds;Parent=Msa0697560-mRNA-1 |
| chr4_4 | CDS | 67617952 | 67618076 | 67617952 | ID=Msa0697560-mRNA-1:cds;Parent=Msa0697560-mRNA-1 |
| chr4_4 | CDS | 67617051 | 67617176 | 67617051 | ID=Msa0697560-mRNA-1:cds;Parent=Msa0697560-mRNA-1 |
| chr4_4 | CDS | 67616596 | 67616778 | 67616596 | ID=Msa0697560-mRNA-1:cds;Parent=Msa0697560-mRNA-1 |
| chr4_4 | CDS | 67616291 | 67616432 | 67616291 | ID=Msa0697560-mRNA-1:cds;Parent=Msa0697560-mRNA-1 |
| chr4_4 | CDS | 67614642 | 67614810 | 67614642 | ID=Msa0697560-mRNA-1:cds;Parent=Msa0697560-mRNA-1 |
| chr4_4 | CDS | 67613899 | 67614033 | 67613899 | ID=Msa0697560-mRNA-1:cds;Parent=Msa0697560-mRNA-1 |
| chr4_4 | CDS | 67613591 | 67613791 | 67613591 | ID=Msa0697560-mRNA-1:cds;Parent=Msa0697560-mRNA-1 |
| chr4_4 | CDS | 67611738 | 67611865 | 67611738 | ID=Msa0697560-mRNA-1:cds;Parent=Msa0697560-mRNA-1 |
| chr4_4 | CDS | 67611601 | 67611652 | 67611601 | ID=Msa0697560-mRNA-1:cds;Parent=Msa0697560-mRNA-1 |
| chr4_4 | CDS | 67611126 | 67611206 | 67611126 | ID=Msa0697560-mRNA-1:cds;Parent=Msa0697560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
