AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0640020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0640020 MtrunA17_Chr4g0023331 94.964 278 8 2 26 297 138 415 0.0 532
Msa0640020 MtrunA17_Chr4g0065961 92.029 276 16 2 26 295 391 666 0.0 522
Msa0640020 MtrunA17_Chr4g0065981 87.410 278 29 2 26 297 398 675 1.31e-176 503
Msa0640020 MtrunA17_Chr4g0065991 85.252 278 35 2 26 297 231 508 1.85e-173 489
Msa0640020 MtrunA17_Chr1g0205571 64.493 276 92 3 26 295 396 671 1.31e-126 375
Msa0640020 MtrunA17_Chr1g0205541 53.612 263 116 2 26 282 396 658 1.73e-102 313
Msa0640020 MtrunA17_Chr3g0119641 51.504 266 120 4 27 283 448 713 3.70e-90 283
Msa0640020 MtrunA17_Chr3g0117081 29.851 268 164 9 30 282 478 736 6.68e-30 119
Msa0640020 MtrunA17_Chr5g0412801 28.679 265 171 7 30 282 450 708 1.60e-27 112
Msa0640020 MtrunA17_Chr8g0368021 41.584 101 57 2 192 290 63 163 2.15e-20 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0640020 AT1G31690.1 56.679 277 112 5 27 295 396 672 3.27e-103 316
Msa0640020 AT1G31710.1 57.303 267 105 5 27 284 399 665 1.76e-101 311
Msa0640020 AT4G14940.1 53.759 266 113 4 27 282 384 649 3.05e-101 310
Msa0640020 AT4G12280.1 48.410 283 132 4 27 295 11 293 1.60e-92 276
Msa0640020 AT1G31670.1 52.518 278 109 5 27 295 473 736 1.35e-88 280
Msa0640020 AT4G12290.1 49.470 283 129 4 27 295 452 734 2.20e-88 279
Msa0640020 AT1G62810.1 47.312 279 137 4 27 295 428 706 6.26e-84 266
Msa0640020 AT3G43670.1 48.689 267 127 5 26 282 408 674 1.86e-83 265
Msa0640020 AT4G12290.2 47.273 220 102 4 27 232 452 671 5.11e-58 197
Msa0640020 AT2G42490.1 28.679 265 173 6 29 282 484 743 1.80e-28 115

Find 108 sgRNAs with CRISPR-Local

Find 526 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCATAATTGTTTGCATATA+GGG 0.160409 4_3:+37408970 None:intergenic
AGGGTGTGTTGCAGGTAATT+TGG 0.218234 4_3:+37408733 None:intergenic
CAAGCACATTGATGAGATTA+AGG 0.230800 4_3:-37400001 Msa0640020:CDS
GAAACTTTACCCTTGTTTAT+TGG 0.241025 4_3:+37409118 None:intergenic
GGACTCAACATGCGTGATTT+TGG 0.252054 4_3:+37408902 None:intergenic
AAACTTTACCCTTGTTTATT+GGG 0.252696 4_3:+37409119 None:intergenic
AACCCTTCTATCATTCCTTT+TGG 0.254874 4_3:+37408933 None:intergenic
AACATCATTGGTTACATCTT+TGG 0.268136 4_3:+37408813 None:intergenic
AACATCATTGGTTACATCTT+TGG 0.268136 4_3:+37408867 None:intergenic
GGGAGAATTATATGGTAAAT+TGG 0.270462 4_3:-37399980 Msa0640020:CDS
GTGCTCAATAGTGGCATTAT+TGG 0.272866 4_3:+37399313 None:intergenic
AGGATTCCTCTCAAAGAAAT+TGG 0.275065 4_3:+37399270 None:intergenic
TGTGATCCAAACATTATAAT+TGG 0.288309 4_3:+37399612 None:intergenic
AGCAAGCACCACACCAATTT+AGG 0.291559 4_3:+37399067 None:intergenic
CATTTACCAATTATAATGTT+TGG 0.296138 4_3:-37399618 Msa0640020:CDS
ATCAGGTATACTGGAAATTA+AGG 0.301138 4_3:-37400034 Msa0640020:CDS
ATTATTCTTACAAATTCATT+AGG 0.317904 4_3:+37407179 None:intergenic
GGGTGTGTTGCAGGTAATTT+GGG 0.319784 4_3:+37408734 None:intergenic
TGGCATAATTGTTTGCATAT+AGG 0.321654 4_3:+37408969 None:intergenic
TGGTTACATCTTTGGATAGA+AGG 0.328339 4_3:+37408821 None:intergenic
TGGTTACATCTTTGGATAGA+AGG 0.328339 4_3:+37408875 None:intergenic
AATCCAAAAGGAATGATAGA+AGG 0.358846 4_3:-37408936 Msa0640020:five_prime_UTR
AAAATTCTTCTGTTGGATCT+TGG 0.365783 4_3:+37407408 None:intergenic
ACTTCCATCTGTGATTCTTA+AGG 0.366672 4_3:+37399852 None:intergenic
GCAAAATAAAGGCAAAATAA+AGG 0.367648 4_3:-37409218 None:intergenic
GATGCTGGAGAGTATGGATT+TGG 0.380275 4_3:-37407368 Msa0640020:five_prime_UTR
GAATCAAACGATATCCGATA+TGG 0.385965 4_3:+37399698 None:intergenic
GATAGCACTATCAGGTATAC+TGG 0.397693 4_3:-37400043 Msa0640020:CDS
GTTTATTCAGTTGGGCCAAC+TGG 0.401555 4_3:-37407559 Msa0640020:intron
AATACTTACCGAGGGCTTGA+TGG 0.401597 4_3:+37406957 None:intergenic
CCTAGAGATGTTGCATGGCC+TGG 0.402113 4_3:-37399229 Msa0640020:CDS
GAGATTAAGGGAGAATTATA+TGG 0.405083 4_3:-37399988 Msa0640020:CDS
TGCTCAATAGTGGCATTATT+GGG 0.406039 4_3:+37399314 None:intergenic
AAACAGATGACATTTATTCA+TGG 0.407339 4_3:+37399120 None:intergenic
CAAGATAGTAAATGTAGAAA+TGG 0.407399 4_3:+37399926 None:intergenic
TCTATACAGATAGCACTATC+AGG 0.413442 4_3:-37400051 Msa0640020:intron
TTAAAGTAAAATTCTTCTGT+TGG 0.413488 4_3:+37407401 None:intergenic
GAGATGACACTTTAGCTGTT+TGG 0.423270 4_3:-37399534 Msa0640020:CDS
ACATATATTCACTCTGTAGA+TGG 0.423715 4_3:-37407284 Msa0640020:five_prime_UTR
ACTGCGGTTGGAAACCATAT+CGG 0.441895 4_3:-37399712 Msa0640020:CDS
TTCGTAGAGTATTATACAAA+GGG 0.445735 4_3:-37407457 Msa0640020:five_prime_UTR
TCTTCTGTTGGATCTTGGTA+TGG 0.449968 4_3:+37407413 None:intergenic
GTAAATGCACCGCGTATTTG+TGG 0.451697 4_3:+37399634 None:intergenic
TGTAACTCTGCTTCTAAGAC+TGG 0.452001 4_3:-37408763 Msa0640020:five_prime_UTR
TGAGCACTTCATTTGAGCTC+AGG 0.454008 4_3:-37399297 Msa0640020:CDS
ATTGGGAAGTCTTCCTGTGT+TGG 0.463137 4_3:+37399331 None:intergenic
GTCTTAGAAGCAGAGTTACA+AGG 0.476110 4_3:+37408766 None:intergenic
AAACATAACAACCAAGACTT+AGG 0.479251 4_3:-37409186 Msa0640020:five_prime_UTR
ATTCTATCATTAATGTGGAT+TGG 0.481512 4_3:+37409092 None:intergenic
AAGCACATTGATGAGATTAA+GGG 0.489295 4_3:-37400000 Msa0640020:CDS
GCCAACTGGAAGTTTCATAT+AGG 0.492654 4_3:-37407545 Msa0640020:five_prime_UTR
ACAATGTGGTGCAACATCAT+TGG 0.494712 4_3:+37408855 None:intergenic
AATATGTGGTGCAACATCAT+TGG 0.498929 4_3:+37408801 None:intergenic
ATGCAACATCTCTAGGAGAA+AGG 0.502565 4_3:+37399236 None:intergenic
TCAAATGAAGTGCTCAATAG+TGG 0.503411 4_3:+37399304 None:intergenic
TATCATTAATGTGGATTGGT+GGG 0.509901 4_3:+37409096 None:intergenic
TATTTGTGGATAATCATCTT+CGG 0.512811 4_3:+37399648 None:intergenic
TGCAACATCTCTAGGAGAAA+GGG 0.513197 4_3:+37399237 None:intergenic
CCAGGCCATGCAACATCTCT+AGG 0.514960 4_3:+37399229 None:intergenic
GGCCAACCAATTTCTTTGAG+AGG 0.515922 4_3:-37399276 Msa0640020:CDS
TTGGTATCAGCAAACAGCAT+TGG 0.517312 4_3:-37399961 Msa0640020:CDS
TTCCTCTCAAAGAAATTGGT+TGG 0.518503 4_3:+37399274 None:intergenic
GCATAATTGTTTGCATATAG+GGG 0.519115 4_3:+37408971 None:intergenic
GGGTTCATTTATAGAATATG+TGG 0.524246 4_3:+37408787 None:intergenic
TTAATCACGACTAGTTCAGC+TGG 0.526814 4_3:+37399748 None:intergenic
CATAGTAATGTGGCATGTAG+TGG 0.528378 4_3:-37399368 Msa0640020:CDS
CAACAGTTCCTCAATCCAAA+AGG 0.529174 4_3:-37408948 Msa0640020:five_prime_UTR
TGTGGTGGACAATCACGGTT+AGG 0.538796 4_3:+37407323 None:intergenic
ATAGTTTCCAACGGTGACTA+CGG 0.551364 4_3:+37407017 None:intergenic
CTATCATTAATGTGGATTGG+TGG 0.552019 4_3:+37409095 None:intergenic
TGAGCATTCTATCATTAATG+TGG 0.552226 4_3:+37409087 None:intergenic
CTTGCATTCATCATGCCTAT+CGG 0.556506 4_3:-37399181 Msa0640020:three_prime_UTR
TTTCGTAGAGTATTATACAA+AGG 0.560841 4_3:-37407458 Msa0640020:five_prime_UTR
GATTGGGAGTTCAAAACAAG+TGG 0.565272 4_3:-37406982 Msa0640020:CDS
ATAGTAATGTGGCATGTAGT+GGG 0.565825 4_3:-37399367 Msa0640020:CDS
ATCCAAAAGGAATGATAGAA+GGG 0.567090 4_3:-37408935 Msa0640020:five_prime_UTR
TCTTAGAAGCAGAGTTACAA+GGG 0.567689 4_3:+37408767 None:intergenic
CACAAATCGCATTCTTCAAG+AGG 0.573831 4_3:+37407252 None:intergenic
AAAACCTTAAGAATCACAGA+TGG 0.575364 4_3:-37399856 Msa0640020:CDS
AGTAAATGTAGAAATGGTCA+TGG 0.576017 4_3:+37399932 None:intergenic
TCGGTTAGAAGTGAATGAGC+AGG 0.579447 4_3:+37399667 None:intergenic
TTTCTCCTAGAGATGTTGCA+TGG 0.580788 4_3:-37399234 Msa0640020:CDS
ATAGGATTTGATGTACGAGC+TGG 0.583714 4_3:-37407527 Msa0640020:five_prime_UTR
GTTCGAACCGTAGTCACCGT+TGG 0.591001 4_3:-37407024 Msa0640020:CDS
AACATTGTCATAGTTTCCAA+CGG 0.593674 4_3:+37407008 None:intergenic
TCGTGAAAGAAATGGTTGCA+TGG 0.598141 4_3:+37409019 None:intergenic
AAGTGGTTCCATCAAGCCCT+CGG 0.599683 4_3:-37406965 Msa0640020:intron
TCCTATATGAAACTTCCAGT+TGG 0.603457 4_3:+37407544 None:intergenic
GAGCGTGTGGTGGACAATCA+CGG 0.605614 4_3:+37407318 None:intergenic
AATAGATCAGACCGTCCGAT+AGG 0.610096 4_3:+37399166 None:intergenic
CTCTATGTTGATCATAGTCG+CGG 0.615782 4_3:-37399556 Msa0640020:CDS
CATCTTTGGATAGAAGGAGT+CGG 0.618799 4_3:+37408827 None:intergenic
CATCTTTGGATAGAAGGAGT+CGG 0.618799 4_3:+37408881 None:intergenic
TGATCTATTCTCACTTCTAG+CGG 0.620645 4_3:-37399152 Msa0640020:three_prime_UTR
ATCGCATTCTTCAAGAGGCG+TGG 0.621173 4_3:+37407257 None:intergenic
GTAACTCTGCTTCTAAGACT+GGG 0.624102 4_3:-37408762 Msa0640020:five_prime_UTR
TCGAACAATCAAATTCACTT+CGG 0.627192 4_3:+37407041 None:intergenic
GAATAGAGACATTGTGAACA+AGG 0.629687 4_3:-37399392 Msa0640020:CDS
CATTCATCATGCCTATCGGA+CGG 0.631379 4_3:-37399177 Msa0640020:three_prime_UTR
CTCTGCTTCTAAGACTGGGA+AGG 0.632248 4_3:-37408758 Msa0640020:five_prime_UTR
GTTAGGTATCAAAGAAACAG+TGG 0.640377 4_3:+37407340 None:intergenic
AATTCATCATGTTCCAACAC+AGG 0.651701 4_3:-37399344 Msa0640020:CDS
AAAATCATCCCAATAAACAA+GGG 0.662119 4_3:-37409127 Msa0640020:five_prime_UTR
TCAATGAAATGAGCGTGTGG+TGG 0.671621 4_3:+37407308 None:intergenic
TGAACAAGGACATAGTAATG+TGG 0.685006 4_3:-37399378 Msa0640020:CDS
GTATCAATGAAATGAGCGTG+TGG 0.729682 4_3:+37407305 None:intergenic
AGGAGTCGGACTCAACAATG+TGG 0.747640 4_3:+37408841 None:intergenic
GATGATTATCCACAAATACG+CGG 0.772031 4_3:-37399643 Msa0640020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATTTTTTTAAATATAA+TGG - chr4_3:37400377-37400396 Msa0640020:intron 0.0%
!! AATTAATAAAATTAATAAAA+AGG - chr4_3:37401835-37401854 Msa0640020:intron 0.0%
!!! TTAATTTTAATATATAATTT+TGG - chr4_3:37404679-37404698 Msa0640020:intron 0.0%
!! AAAATTTATTCACATAAAAT+TGG - chr4_3:37399682-37399701 Msa0640020:intron 10.0%
!!! ATATTTAGAGTTTTTTAAAT+TGG + chr4_3:37399729-37399748 None:intergenic 10.0%
!! GATAAAATATAATTATTGTA+TGG - chr4_3:37399864-37399883 Msa0640020:CDS 10.0%
!! AAGATTAAAATAAATTACAA+CGG - chr4_3:37400074-37400093 Msa0640020:intron 10.0%
!! GATAAAATATAATTATTGTA+TGG - chr4_3:37399864-37399883 Msa0640020:CDS 10.0%
!! TAACTTAAAAAGTAATATTA+TGG - chr4_3:37401631-37401650 Msa0640020:intron 10.0%
!! ATGTATATAAATTAAATCTT+TGG - chr4_3:37401696-37401715 Msa0640020:intron 10.0%
!! ATAAATAAAAATTTATACAC+GGG + chr4_3:37402113-37402132 None:intergenic 10.0%
!!! TTGCTAATTTTTAAATAAAA+AGG - chr4_3:37402150-37402169 Msa0640020:intron 10.0%
!! ATAAAATAAAATGAACATAA+TGG - chr4_3:37403656-37403675 Msa0640020:intron 10.0%
!! TATAAAAAATTTACATTAAC+CGG - chr4_3:37404146-37404165 Msa0640020:intron 10.0%
!! TAAAGAATAAAAACATAAAA+AGG - chr4_3:37404344-37404363 Msa0640020:intron 10.0%
!!! ATTTTAAACTAAAATTTGTT+CGG + chr4_3:37404867-37404886 None:intergenic 10.0%
!! AAAAAACTATAAAAAACAAA+TGG - chr4_3:37406757-37406776 Msa0640020:intron 10.0%
!!! TTGGATTTTTTTTTTTTTTT+TGG + chr4_3:37406843-37406862 None:intergenic 10.0%
!!! TTACAATATTTTTTTTGATA+AGG + chr4_3:37407987-37408006 None:intergenic 10.0%
!!! TTCTTTATTATTATTTTCTT+TGG - chr4_3:37408039-37408058 Msa0640020:intron 10.0%
!!! ATGCAACAATTTTTTTTTAA+GGG - chr4_3:37399179-37399198 Msa0640020:three_prime_UTR 15.0%
!! CTTAAAAATAAATAAGACTA+GGG - chr4_3:37399776-37399795 Msa0640020:CDS 15.0%
!! TCAAAAACAATAATCATATT+TGG + chr4_3:37399829-37399848 None:intergenic 15.0%
!! GTATATGTATCTAAATAATA+TGG + chr4_3:37399904-37399923 None:intergenic 15.0%
!! TGTATAATTCTATAATCTAT+TGG - chr4_3:37400402-37400421 Msa0640020:intron 15.0%
!! AAGTTATAAATGAAAAAAGA+TGG + chr4_3:37400566-37400585 None:intergenic 15.0%
!!! AAACTTTATGATTTAATTTC+TGG - chr4_3:37400598-37400617 Msa0640020:intron 15.0%
!! ATTATTCTTACAAATTCATT+AGG + chr4_3:37401049-37401068 None:intergenic 15.0%
!! AGTAATATTATGGTATAATT+TGG - chr4_3:37401641-37401660 Msa0640020:intron 15.0%
!! TAAATAAAAATTTATACACG+GGG + chr4_3:37402112-37402131 None:intergenic 15.0%
!!! ATAATGTTACTTCATATAAA+AGG - chr4_3:37402222-37402241 Msa0640020:intron 15.0%
!!! GCATGAAATAATTTTTTTTT+TGG + chr4_3:37402345-37402364 None:intergenic 15.0%
!!! ATATATGTTTAGTTTAAAAG+AGG - chr4_3:37402440-37402459 Msa0640020:intron 15.0%
!!! TATATGTTTAGTTTAAAAGA+GGG - chr4_3:37402441-37402460 Msa0640020:intron 15.0%
!! GATTAAAATTAAAGACTTTA+AGG + chr4_3:37402563-37402582 None:intergenic 15.0%
!! TCAAAAAACTTTCTTAATTA+GGG + chr4_3:37403096-37403115 None:intergenic 15.0%
!! TTCAAAAAACTTTCTTAATT+AGG + chr4_3:37403097-37403116 None:intergenic 15.0%
!! TTGGATAAGATATATAATTA+AGG - chr4_3:37403203-37403222 Msa0640020:intron 15.0%
!! TATATTTGTAATTTCATCAT+GGG + chr4_3:37403430-37403449 None:intergenic 15.0%
!! TTATATTTGTAATTTCATCA+TGG + chr4_3:37403431-37403450 None:intergenic 15.0%
!! AAATCAAAATAAACAAAGAA+CGG - chr4_3:37403792-37403811 Msa0640020:intron 15.0%
!!! GTAATAACTTCTTTTAATAA+TGG + chr4_3:37404172-37404191 None:intergenic 15.0%
!!! TGTTTATTGGTATTTAATTT+TGG + chr4_3:37404194-37404213 None:intergenic 15.0%
!! CTATTTATATGATTGTTTAT+TGG + chr4_3:37404207-37404226 None:intergenic 15.0%
!!! TAAAAATAAAGTTGATGAAT+TGG + chr4_3:37404578-37404597 None:intergenic 15.0%
!!! AACTTTATTTTTATAATGAC+AGG - chr4_3:37404585-37404604 Msa0640020:intron 15.0%
!!! TGAAATAAAATTTTAATGCA+TGG - chr4_3:37404741-37404760 Msa0640020:intron 15.0%
!! CTTCTTAGTTTAAATTAAAT+TGG - chr4_3:37404986-37405005 Msa0640020:intron 15.0%
!! AATAAATTAGGAATAAGTTA+AGG + chr4_3:37405101-37405120 None:intergenic 15.0%
!! AAAATACAAACATATGTATA+TGG - chr4_3:37405294-37405313 Msa0640020:intron 15.0%
!!! TAAAATAGCAGTATTTTTTT+TGG - chr4_3:37405492-37405511 Msa0640020:intron 15.0%
!!! TATGGTATTTTTTTGAAAAT+TGG + chr4_3:37406167-37406186 None:intergenic 15.0%
!! AAAAAATATAAGAGATTTAC+AGG - chr4_3:37406267-37406286 Msa0640020:intron 15.0%
!!! TCAAAATAACTATTTTTTAG+AGG + chr4_3:37406583-37406602 None:intergenic 15.0%
!!! GTTGATTTTTAATTATGAAA+AGG + chr4_3:37406792-37406811 None:intergenic 15.0%
!!! TTTTTTTTTTTTTGGATCTA+TGG + chr4_3:37406835-37406854 None:intergenic 15.0%
!! AAAAAAAAATCCAATGAAAA+TGG - chr4_3:37406849-37406868 Msa0640020:intron 15.0%
!! AAAAAAAATCCAATGAAAAT+GGG - chr4_3:37406850-37406869 Msa0640020:intron 15.0%
!!! TTTTTTTTTTGTTACAAAGA+AGG - chr4_3:37406995-37407014 Msa0640020:CDS 15.0%
!! GTACATTATATAGTAAAATT+TGG - chr4_3:37407070-37407089 Msa0640020:intron 15.0%
!!! AAAAGCATTAATTGTATATT+AGG - chr4_3:37407405-37407424 Msa0640020:five_prime_UTR 15.0%
!!! TTAAACAAATATCTTTTTTG+TGG - chr4_3:37407505-37407524 Msa0640020:five_prime_UTR 15.0%
!! AAAAATAAATTCACAAAAAG+AGG - chr4_3:37407702-37407721 Msa0640020:intron 15.0%
!! AAAATAAATTCACAAAAAGA+GGG - chr4_3:37407703-37407722 Msa0640020:intron 15.0%
!! TTATAATAGAACTGAAAAAT+GGG - chr4_3:37408638-37408657 Msa0640020:intron 15.0%
!!! TAATTTCATTTTTCCTAAAT+TGG - chr4_3:37409145-37409164 Msa0640020:five_prime_UTR 15.0%
!! CTTAAAAAAAAATTGTTGCA+TGG + chr4_3:37399180-37399199 None:intergenic 20.0%
!!! CATGCAACAATTTTTTTTTA+AGG - chr4_3:37399178-37399197 Msa0640020:three_prime_UTR 20.0%
!! CATATATGACCATTAATATA+GGG + chr4_3:37399537-37399556 None:intergenic 20.0%
!! ACATATATGACCATTAATAT+AGG + chr4_3:37399538-37399557 None:intergenic 20.0%
!!! TTATGTGAATAAATTTTGCA+AGG + chr4_3:37399679-37399698 None:intergenic 20.0%
!!! TGGATATTTTACATATTACA+AGG + chr4_3:37399709-37399728 None:intergenic 20.0%
!!! CCTAGTCTTATTTATTTTTA+AGG + chr4_3:37399778-37399797 None:intergenic 20.0%
!! CCTTAAAAATAAATAAGACT+AGG - chr4_3:37399775-37399794 Msa0640020:CDS 20.0%
!!! ATATGATTATTGTTTTTGAG+TGG - chr4_3:37399830-37399849 Msa0640020:CDS 20.0%
!! ATAAATGAAAAAAGATGGAA+AGG + chr4_3:37399946-37399965 None:intergenic 20.0%
!! CCAATATAAATGAAAAAAGA+TGG + chr4_3:37399951-37399970 None:intergenic 20.0%
!!! CCATCTTTTTTCATTTATAT+TGG - chr4_3:37399948-37399967 Msa0640020:CDS 20.0%
!! CTAGTAAAATATATAGTTAC+AGG - chr4_3:37400124-37400143 Msa0640020:intron 20.0%
!! CTAGTAAAATATATAGTTAC+AGG - chr4_3:37400124-37400143 Msa0640020:intron 20.0%
!! TAATTCTATAATCTATTGGT+TGG - chr4_3:37400406-37400425 Msa0640020:intron 20.0%
!! GTATACGTATCTAAATAATA+TGG + chr4_3:37400519-37400538 None:intergenic 20.0%
!! ATAAATGAAAAAAGATGGAA+AGG + chr4_3:37399946-37399965 None:intergenic 20.0%
!! TTAAAGTAAAATTCTTCTGT+TGG + chr4_3:37400827-37400846 None:intergenic 20.0%
!!! ATTTGTGTTTTTGAACAATA+TGG - chr4_3:37400989-37401008 Msa0640020:intron 20.0%
!!! TCTCTTTGTTTTATTGTTTT+TGG - chr4_3:37401142-37401161 Msa0640020:intron 20.0%
!! TTTAATTAAATACTTACCGA+GGG + chr4_3:37401279-37401298 None:intergenic 20.0%
!! ACTATTTAAACTTTCAAAAG+TGG - chr4_3:37401390-37401409 Msa0640020:intron 20.0%
!!! TTTTTAAGACATAACTAGTA+TGG - chr4_3:37401467-37401486 Msa0640020:intron 20.0%
!! ATATTATGGTATAATTTGGT+CGG - chr4_3:37401645-37401664 Msa0640020:intron 20.0%
!!! ATATGTTTAGTTTAAAAGAG+GGG - chr4_3:37402442-37402461 Msa0640020:intron 20.0%
!!! TAAAATTAAAGTGCAAGTTT+TGG + chr4_3:37402864-37402883 None:intergenic 20.0%
!! ATTTCATATTAAGTAGAACT+TGG + chr4_3:37402903-37402922 None:intergenic 20.0%
!! CAAAAAACTTTCTTAATTAG+GGG + chr4_3:37403095-37403114 None:intergenic 20.0%
!!! TTTGTTATTAAGTTCTTGAA+TGG - chr4_3:37403165-37403184 Msa0640020:intron 20.0%
!!! TTGTTATTAAGTTCTTGAAT+GGG - chr4_3:37403166-37403185 Msa0640020:intron 20.0%
!!! TTTTTGTTTTTTTCCTGTTA+CGG + chr4_3:37403275-37403294 None:intergenic 20.0%
!! ATATTTGTAATTTCATCATG+GGG + chr4_3:37403429-37403448 None:intergenic 20.0%
!! TTACTATGATTGAAGATAAA+CGG - chr4_3:37403594-37403613 Msa0640020:intron 20.0%
!! ATAAACTCATTTATTCTCTT+TGG + chr4_3:37403718-37403737 None:intergenic 20.0%
!! AGAGAATAAATGAGTTTATT+TGG - chr4_3:37403719-37403738 Msa0640020:intron 20.0%
!! AATCAAAATAAACAAAGAAC+GGG - chr4_3:37403793-37403812 Msa0640020:intron 20.0%
!! ATAACAAATCTGAGTATAAA+AGG - chr4_3:37403941-37403960 Msa0640020:intron 20.0%
!! CATAATTAGTACCAAAATAA+AGG - chr4_3:37403968-37403987 Msa0640020:intron 20.0%
!!! ATTATTAGCTACCTTTATTT+TGG + chr4_3:37403982-37404001 None:intergenic 20.0%
!!! AATACATACCTTTTAGATAA+TGG + chr4_3:37404057-37404076 None:intergenic 20.0%
!!! TTACTATTTTACACCATTTT+AGG + chr4_3:37404087-37404106 None:intergenic 20.0%
!!! TTCTTCTTTAAAGAAAAAGT+TGG - chr4_3:37404271-37404290 Msa0640020:intron 20.0%
!!! TCTTCTTTAAAGAAAAAGTT+GGG - chr4_3:37404272-37404291 Msa0640020:intron 20.0%
!!! AAGCTTGTTTATTATTTTAG+TGG - chr4_3:37404510-37404529 Msa0640020:intron 20.0%
!!! GAACTTTAAAAATGAAGTAA+AGG + chr4_3:37404914-37404933 None:intergenic 20.0%
!! TGAACTGAAAGTAATAAATT+AGG + chr4_3:37405113-37405132 None:intergenic 20.0%
!! TATGGAAATATCATTTGAAT+TGG - chr4_3:37405312-37405331 Msa0640020:intron 20.0%
!!! AATACTGCTATTTTAAGATT+AGG + chr4_3:37405487-37405506 None:intergenic 20.0%
!! TAAAGAATATGAGAACAATT+TGG - chr4_3:37405617-37405636 Msa0640020:intron 20.0%
!!! AATTTGGAATAGAATTTTGT+GGG - chr4_3:37405633-37405652 Msa0640020:intron 20.0%
!! CTAATTTATTGTGAATCAAA+AGG - chr4_3:37405804-37405823 Msa0640020:intron 20.0%
!!! GTATTTTTTTGAAAATTGGT+CGG + chr4_3:37406163-37406182 None:intergenic 20.0%
!!! TTTTGAATAAACTCTTTGTT+AGG + chr4_3:37406401-37406420 None:intergenic 20.0%
!! GAGTTTATTCAAAAATATGT+TGG - chr4_3:37406407-37406426 Msa0640020:intron 20.0%
!! TTTATTCAAAAATATGTTGG+AGG - chr4_3:37406410-37406429 Msa0640020:intron 20.0%
!! AGGATATAAATAGAGATAAA+CGG - chr4_3:37406430-37406449 Msa0640020:intron 20.0%
!!! ATTTTTTTTGGATGATTTGT+TGG + chr4_3:37406512-37406531 None:intergenic 20.0%
!! ATCCAAAAAAAATTGATTGA+CGG - chr4_3:37406519-37406538 Msa0640020:intron 20.0%
!!! AAATTTGACTAATTCCTTTT+GGG + chr4_3:37406613-37406632 None:intergenic 20.0%
!!! AAAATTTGACTAATTCCTTT+TGG + chr4_3:37406614-37406633 None:intergenic 20.0%
!!! TGTTGTTTTCATTATTGTTT+AGG + chr4_3:37406735-37406754 None:intergenic 20.0%
!!! AATTGATCAATATTTTGTAG+CGG + chr4_3:37407038-37407057 None:intergenic 20.0%
!!! TTGGTTTGATATTTGAAATT+AGG - chr4_3:37407089-37407108 Msa0640020:intron 20.0%
!!! TGGTTTGATATTTGAAATTA+GGG - chr4_3:37407090-37407109 Msa0640020:intron 20.0%
!! TTAAAATTGAATGATTGCTA+AGG - chr4_3:37407276-37407295 Msa0640020:five_prime_UTR 20.0%
!!! ATATTGTAGATATCTTTTTG+TGG - chr4_3:37407477-37407496 Msa0640020:five_prime_UTR 20.0%
!! AAAGATTTCAAAATCTTTAG+AGG - chr4_3:37407549-37407568 Msa0640020:five_prime_UTR 20.0%
!! TATGTACTGTATAAATCTAA+GGG - chr4_3:37407795-37407814 Msa0640020:intron 20.0%
!! CATTTACCAATTATAATGTT+TGG - chr4_3:37408607-37408626 Msa0640020:intron 20.0%
!!! CATTTTTCAGTTCTATTATA+AGG + chr4_3:37408639-37408658 None:intergenic 20.0%
!! CTTATAATAGAACTGAAAAA+TGG - chr4_3:37408637-37408656 Msa0640020:intron 20.0%
!! AAAAAATGCTGTGATAAATT+AGG + chr4_3:37409209-37409228 None:intergenic 20.0%
!!! ATTTTTGTTTTCCTAAGTCT+TGG + chr4_3:37399053-37399072 None:intergenic 25.0%
! GACTTAGGAAAACAAAAATT+AGG - chr4_3:37399054-37399073 Msa0640020:three_prime_UTR 25.0%
! AAAAATTAGGAAGTCCAAAA+TGG - chr4_3:37399067-37399086 Msa0640020:three_prime_UTR 25.0%
!!! GTTTATTGGGATGATTTTTT+TGG + chr4_3:37399096-37399115 None:intergenic 25.0%
! AAAAATCATCCCAATAAACA+AGG - chr4_3:37399097-37399116 Msa0640020:three_prime_UTR 25.0%
! AAAATCATCCCAATAAACAA+GGG - chr4_3:37399098-37399117 Msa0640020:three_prime_UTR 25.0%
!! AAACTTTACCCTTGTTTATT+GGG + chr4_3:37399109-37399128 None:intergenic 25.0%
! ATTCTATCATTAATGTGGAT+TGG + chr4_3:37399136-37399155 None:intergenic 25.0%
!! CATATTTTTCGTGAAAGAAA+TGG + chr4_3:37399217-37399236 None:intergenic 25.0%
!! ATTTTGCAAGGACAAAAAAT+TGG + chr4_3:37399667-37399686 None:intergenic 25.0%
!!! TTTTTTCATTTATATTGGCG+TGG - chr4_3:37399953-37399972 Msa0640020:CDS 25.0%
!!! TGCAATATCTATTTTAGTGA+TGG + chr4_3:37400024-37400043 None:intergenic 25.0%
!!! TAAGCATAGCACTTTTATTT+TGG + chr4_3:37400101-37400120 None:intergenic 25.0%
!!! TAAGCATAGCACTTTTATTT+TGG + chr4_3:37400101-37400120 None:intergenic 25.0%
! TCTTTATGTGTTTATTCAGT+TGG - chr4_3:37400657-37400676 Msa0640020:intron 25.0%
! CTTTATGTGTTTATTCAGTT+GGG - chr4_3:37400658-37400677 Msa0640020:intron 25.0%
!! TTTCGTAGAGTATTATACAA+AGG - chr4_3:37400767-37400786 Msa0640020:intron 25.0%
!! TTCGTAGAGTATTATACAAA+GGG - chr4_3:37400768-37400787 Msa0640020:intron 25.0%
!!! ACTATGACAATGTTTTAGAT+TGG - chr4_3:37401226-37401245 Msa0640020:intron 25.0%
!!! CTATGACAATGTTTTAGATT+GGG - chr4_3:37401227-37401246 Msa0640020:intron 25.0%
! GTTTAATTAAATACTTACCG+AGG + chr4_3:37401280-37401299 None:intergenic 25.0%
! AAAGTTTAAATAGTCTCCTA+AGG + chr4_3:37401384-37401403 None:intergenic 25.0%
! AAAAGTTTATTCATGTGTCT+AGG - chr4_3:37401965-37401984 Msa0640020:intron 25.0%
! AAAGTTTATTCATGTGTCTA+GGG - chr4_3:37401966-37401985 Msa0640020:intron 25.0%
! AAATTATTTCATGCTTCCTT+AGG - chr4_3:37402351-37402370 Msa0640020:intron 25.0%
! AATTATTTCATGCTTCCTTA+GGG - chr4_3:37402352-37402371 Msa0640020:intron 25.0%
! ATGTTTGATTCATAAGAGTA+GGG - chr4_3:37402508-37402527 Msa0640020:intron 25.0%
!! AATTTGTAGTTCTCAGATTT+TGG + chr4_3:37402935-37402954 None:intergenic 25.0%
!!! AAGTTCTAAAACAATTGGTA+TGG - chr4_3:37403034-37403053 Msa0640020:intron 25.0%
! TTGTATCGTTAATTCATAGA+TGG - chr4_3:37403308-37403327 Msa0640020:intron 25.0%
!!! TTTTAAAGTGATTACTACAG+TGG - chr4_3:37403496-37403515 Msa0640020:intron 25.0%
! ATGACTTGAACTGATTATTT+AGG - chr4_3:37403528-37403547 Msa0640020:intron 25.0%
! CAACTCATGATATGAATTAT+GGG + chr4_3:37403758-37403777 None:intergenic 25.0%
! TCAACTCATGATATGAATTA+TGG + chr4_3:37403759-37403778 None:intergenic 25.0%
! CAAAATGTTCTTGAAAGTTA+CGG - chr4_3:37403844-37403863 Msa0640020:intron 25.0%
!! ATAGAACATTGTAGTATTGA+AGG + chr4_3:37403923-37403942 None:intergenic 25.0%
!! TAACTTCTTTTAATAATGGC+CGG + chr4_3:37404168-37404187 None:intergenic 25.0%
! AACAATCATATAAATAGCGA+TGG - chr4_3:37404210-37404229 Msa0640020:intron 25.0%
! AGAAGAAGAGAAGTTAAAAA+AGG + chr4_3:37404258-37404277 None:intergenic 25.0%
!! TTAAGTCACTTCTTTTTATC+AGG + chr4_3:37404321-37404340 None:intergenic 25.0%
!! AACACTACAAGTTTTCAATT+AGG + chr4_3:37404634-37404653 None:intergenic 25.0%
!!! GAAATTGATTTGTGATAGAA+AGG + chr4_3:37404789-37404808 None:intergenic 25.0%
! AAAATGAAGTAAAGGTTGTT+TGG + chr4_3:37404906-37404925 None:intergenic 25.0%
!!! AGAAGCAACTTTAAAATCAA+AGG + chr4_3:37404948-37404967 None:intergenic 25.0%
! TGTATGAAAACATCTTGAAT+CGG - chr4_3:37405057-37405076 Msa0640020:intron 25.0%
! ATGGAGAGTAATAAATTATG+AGG + chr4_3:37405365-37405384 None:intergenic 25.0%
! ATTGAATGCAGAGTAATAAA+TGG + chr4_3:37405384-37405403 None:intergenic 25.0%
!!! AATAGCAGTATTTTTTTTGG+TGG - chr4_3:37405495-37405514 Msa0640020:intron 25.0%
! TATAATATATGCAAAGTCTG+AGG + chr4_3:37405534-37405553 None:intergenic 25.0%
!!! CAATTTGGAATAGAATTTTG+TGG - chr4_3:37405632-37405651 Msa0640020:intron 25.0%
! ATGTTATATAAACGACCAAA+AGG + chr4_3:37405716-37405735 None:intergenic 25.0%
! ATAACGTATGTTGAATTCAT+GGG - chr4_3:37405942-37405961 Msa0640020:intron 25.0%
! AAATAAGTATCAAGATTGAC+CGG - chr4_3:37405995-37406014 Msa0640020:intron 25.0%
!!! TTTGAGATATCCTTCAATTT+TGG - chr4_3:37406118-37406137 Msa0640020:intron 25.0%
!! TTGAGATATCCTTCAATTTT+GGG - chr4_3:37406119-37406138 Msa0640020:intron 25.0%
! TACCATATTTATTGAGTTCT+TGG - chr4_3:37406180-37406199 Msa0640020:intron 25.0%
!!! TGCATTATGTTTTATTGATG+TGG + chr4_3:37406218-37406237 None:intergenic 25.0%
! TGCATGTGAAAATCAAAAAT+AGG - chr4_3:37406240-37406259 Msa0640020:intron 25.0%
! GCATGTGAAAATCAAAAATA+GGG - chr4_3:37406241-37406260 Msa0640020:intron 25.0%
! TAAGAGATTTACAGGTTAAT+TGG - chr4_3:37406275-37406294 Msa0640020:intron 25.0%
! AAGAGATTTACAGGTTAATT+GGG - chr4_3:37406276-37406295 Msa0640020:intron 25.0%
!!! ATCCGTCAATCAATTTTTTT+TGG + chr4_3:37406524-37406543 None:intergenic 25.0%
!!! ATTTTGATTTTTCTCCCAAA+AGG - chr4_3:37406596-37406615 Msa0640020:intron 25.0%
! AATCAATTGAATCAATCAGA+TGG - chr4_3:37406701-37406720 Msa0640020:intron 25.0%
! TGAAAGAGATTACTAAAAGA+AGG - chr4_3:37406957-37406976 Msa0640020:intron 25.0%
!! TGATATTTGAAATTAGGGAT+TGG - chr4_3:37407095-37407114 Msa0640020:intron 25.0%
!! GATATTTGAAATTAGGGATT+GGG - chr4_3:37407096-37407115 Msa0640020:intron 25.0%
!! ATATTTGAAATTAGGGATTG+GGG - chr4_3:37407097-37407116 Msa0640020:intron 25.0%
!!! ACAGATTTGATGTTTTATTG+AGG - chr4_3:37407311-37407330 Msa0640020:five_prime_UTR 25.0%
! GTATGTACTGTATAAATCTA+AGG - chr4_3:37407794-37407813 Msa0640020:intron 25.0%
! AATTGACATTACATTAGACT+AGG - chr4_3:37407913-37407932 Msa0640020:intron 25.0%
! ATTGACATTACATTAGACTA+GGG - chr4_3:37407914-37407933 Msa0640020:intron 25.0%
! CAAGATAGTAAATGTAGAAA+TGG + chr4_3:37408302-37408321 None:intergenic 25.0%
!!! TATCTTGATTTTGATATCGA+CGG - chr4_3:37408315-37408334 Msa0640020:intron 25.0%
! GTTCAAAAAGAAAGAGTTAT+TGG - chr4_3:37408394-37408413 Msa0640020:intron 25.0%
! TAATTCGAACAAAAAAACTG+CGG - chr4_3:37408497-37408516 Msa0640020:intron 25.0%
! TATTTGTGGATAATCATCTT+CGG + chr4_3:37408580-37408599 None:intergenic 25.0%
! TGTGATCCAAACATTATAAT+TGG + chr4_3:37408616-37408635 None:intergenic 25.0%
! ATAAACTTCATCTTACTGTT+TGG + chr4_3:37408718-37408737 None:intergenic 25.0%
!!! AGCATTTTCTAGTTTTACTT+GGG + chr4_3:37409026-37409045 None:intergenic 25.0%
!!! AAGCATTTTCTAGTTTTACT+TGG + chr4_3:37409027-37409046 None:intergenic 25.0%
! AAACAGATGACATTTATTCA+TGG + chr4_3:37409108-37409127 None:intergenic 25.0%
AAACATAACAACCAAGACTT+AGG - chr4_3:37399039-37399058 Msa0640020:three_prime_UTR 30.0%
!!! GATTTTTTTGGAGACCATTT+TGG + chr4_3:37399084-37399103 None:intergenic 30.0%
! GAAACTTTACCCTTGTTTAT+TGG + chr4_3:37399110-37399129 None:intergenic 30.0%
!! TATCATTAATGTGGATTGGT+GGG + chr4_3:37399132-37399151 None:intergenic 30.0%
TGAGCATTCTATCATTAATG+TGG + chr4_3:37399141-37399160 None:intergenic 30.0%
GCATAATTGTTTGCATATAG+GGG + chr4_3:37399257-37399276 None:intergenic 30.0%
GGCATAATTGTTTGCATATA+GGG + chr4_3:37399258-37399277 None:intergenic 30.0%
TGGCATAATTGTTTGCATAT+AGG + chr4_3:37399259-37399278 None:intergenic 30.0%
AATCCAAAAGGAATGATAGA+AGG - chr4_3:37399289-37399308 Msa0640020:CDS 30.0%
ATCCAAAAGGAATGATAGAA+GGG - chr4_3:37399290-37399309 Msa0640020:CDS 30.0%
! AACATCATTGGTTACATCTT+TGG + chr4_3:37399361-37399380 None:intergenic 30.0%
! AACATCATTGGTTACATCTT+TGG + chr4_3:37399361-37399380 None:intergenic 30.0%
GGGTTCATTTATAGAATATG+TGG + chr4_3:37399441-37399460 None:intergenic 30.0%
!!! ATCACATGGTACCTTTTTTA+GGG + chr4_3:37399514-37399533 None:intergenic 30.0%
TATGCACTACATAAAGACTA+AGG - chr4_3:37399746-37399765 Msa0640020:CDS 30.0%
ATGCACTACATAAAGACTAA+GGG - chr4_3:37399747-37399766 Msa0640020:CDS 30.0%
!!! TATCTATTTTAGTGATGGAG+AGG + chr4_3:37400019-37400038 None:intergenic 30.0%
! TCTATTGGTTGGATTCAATT+TGG - chr4_3:37400417-37400436 Msa0640020:intron 30.0%
GGATAATAAGTTTACTAGCT+AGG - chr4_3:37400438-37400457 Msa0640020:intron 30.0%
ATTATATCTCAAGCAATGAC+TGG + chr4_3:37400633-37400652 None:intergenic 30.0%
AAAATTCTTCTGTTGGATCT+TGG + chr4_3:37400820-37400839 None:intergenic 30.0%
!! TTTAAGACATTTTTCGATGC+TGG - chr4_3:37400842-37400861 Msa0640020:intron 30.0%
ACATATATTCACTCTGTAGA+TGG - chr4_3:37400941-37400960 Msa0640020:intron 30.0%
TCGAACAATCAAATTCACTT+CGG + chr4_3:37401187-37401206 None:intergenic 30.0%
AACATTGTCATAGTTTCCAA+CGG + chr4_3:37401220-37401239 None:intergenic 30.0%
AAATGTTAACAAGTGTCCTT+AGG - chr4_3:37401365-37401384 Msa0640020:intron 30.0%
GACTAAAATGACTCTAACAA+TGG + chr4_3:37401868-37401887 None:intergenic 30.0%
AAATATAGCCTACCTATCTT+AGG + chr4_3:37401922-37401941 None:intergenic 30.0%
! AGTCTAGTTGATTAGTTGAT+TGG - chr4_3:37402281-37402300 Msa0640020:intron 30.0%
! TAGTTGATTAGTTGATTGGT+TGG - chr4_3:37402285-37402304 Msa0640020:intron 30.0%
!! AGATGGGAGATTTTAATAGA+GGG - chr4_3:37402392-37402411 Msa0640020:intron 30.0%
CATGTTTGATTCATAAGAGT+AGG - chr4_3:37402507-37402526 Msa0640020:intron 30.0%
TGTTTGATTCATAAGAGTAG+GGG - chr4_3:37402509-37402528 Msa0640020:intron 30.0%
AGAACTTGGATGATTGAAAT+AGG + chr4_3:37402889-37402908 None:intergenic 30.0%
!!! TAGTTCTCAGATTTTGGAAT+TGG + chr4_3:37402929-37402948 None:intergenic 30.0%
ACAAATTGATCATCCTAGTT+TGG - chr4_3:37402948-37402967 Msa0640020:intron 30.0%
!!! GTTTTAGAACTTGCTCAAAT+TGG + chr4_3:37403026-37403045 None:intergenic 30.0%
!! TGAGCAAGTTCTAAAACAAT+TGG - chr4_3:37403029-37403048 Msa0640020:intron 30.0%
ATGGGATTTCATCTTAACAT+TGG - chr4_3:37403184-37403203 Msa0640020:intron 30.0%
ATCGATAGAAGATTGTTGAT+TGG + chr4_3:37403249-37403268 None:intergenic 30.0%
TGACAAGTTTGGTAGAAATA+AGG + chr4_3:37403377-37403396 None:intergenic 30.0%
TACCAAACTTGTCAAATTAC+AGG - chr4_3:37403383-37403402 Msa0640020:intron 30.0%
!! ATGGGGTTTGTTTTCTTAAA+AGG + chr4_3:37403412-37403431 None:intergenic 30.0%
TAGATTGATTATTGCTTTGC+AGG + chr4_3:37403891-37403910 None:intergenic 30.0%
!! AAAAATAAAGGGCGTCTAAT+AGG - chr4_3:37404008-37404027 Msa0640020:intron 30.0%
!! AAAATAAAGGGCGTCTAATA+GGG - chr4_3:37404009-37404028 Msa0640020:intron 30.0%
!! CCTTTTAGATAATGGTTCAA+GGG + chr4_3:37404049-37404068 None:intergenic 30.0%
!! ACCTTTTAGATAATGGTTCA+AGG + chr4_3:37404050-37404069 None:intergenic 30.0%
TGTATTACACGTACCTAAAA+TGG - chr4_3:37404071-37404090 Msa0640020:intron 30.0%
AAGTCAGCAAATTGAACTTT+AGG - chr4_3:37404369-37404388 Msa0640020:intron 30.0%
AAGAAAAATATGTTGCTAGC+GGG + chr4_3:37404436-37404455 None:intergenic 30.0%
GAAGAAAAATATGTTGCTAG+CGG + chr4_3:37404437-37404456 None:intergenic 30.0%
GATATGGTGTAACGTTTAAA+GGG + chr4_3:37405449-37405468 None:intergenic 30.0%
GTTCATGTAATAAGTGGATA+TGG + chr4_3:37405465-37405484 None:intergenic 30.0%
GATTAGGTTCATGTAATAAG+TGG + chr4_3:37405471-37405490 None:intergenic 30.0%
ATAAATTAGAATCCCACTGT+TGG + chr4_3:37405793-37405812 None:intergenic 30.0%
AGGTGTTAGGAAATTATGTT+CGG + chr4_3:37405895-37405914 None:intergenic 30.0%
ACATACGTTATCTCAATTCA+CGG + chr4_3:37405933-37405952 None:intergenic 30.0%
GATAACGTATGTTGAATTCA+TGG - chr4_3:37405941-37405960 Msa0640020:intron 30.0%
AAAAGAACTAAACCTACTGA+AGG + chr4_3:37406080-37406099 None:intergenic 30.0%
CACCAAGAACTCAATAAATA+TGG + chr4_3:37406185-37406204 None:intergenic 30.0%
! ACAAAGAAGGTATAAGAGTT+TGG - chr4_3:37407008-37407027 Msa0640020:CDS 30.0%
! CAAAGAAGGTATAAGAGTTT+GGG - chr4_3:37407009-37407028 Msa0640020:CDS 30.0%
! TATTTGAAATTAGGGATTGG+GGG - chr4_3:37407098-37407117 Msa0640020:intron 30.0%
ATGTGAGAGTTGAAAATGAA+TGG - chr4_3:37407172-37407191 Msa0640020:intron 30.0%
AAATCACCTCAAATTAAGCA+AGG + chr4_3:37407252-37407271 None:intergenic 30.0%
ATTAAGCAAATCAAAACCGT+TGG + chr4_3:37407353-37407372 None:intergenic 30.0%
!!! ATGGAACCACTTGTTTTAAA+CGG - chr4_3:37407730-37407749 Msa0640020:intron 30.0%
!! TTTTGACCGTTTAAAACAAG+TGG + chr4_3:37407739-37407758 None:intergenic 30.0%
!! TGTTTTAAACGGTCAAAAAG+AGG - chr4_3:37407741-37407760 Msa0640020:intron 30.0%
TCAAACTTACTTAAAGTGCA+AGG + chr4_3:37408130-37408149 None:intergenic 30.0%
ATCAGGTATACTGGAAATTA+AGG - chr4_3:37408191-37408210 Msa0640020:intron 30.0%
AAGCACATTGATGAGATTAA+GGG - chr4_3:37408225-37408244 Msa0640020:intron 30.0%
GAGATTAAGGGAGAATTATA+TGG - chr4_3:37408237-37408256 Msa0640020:intron 30.0%
GGGAGAATTATATGGTAAAT+TGG - chr4_3:37408245-37408264 Msa0640020:intron 30.0%
AGTAAATGTAGAAATGGTCA+TGG + chr4_3:37408296-37408315 None:intergenic 30.0%
AAAACCTTAAGAATCACAGA+TGG - chr4_3:37408369-37408388 Msa0640020:intron 30.0%
! TGTGATTTTTGCATCTGATT+CGG + chr4_3:37408445-37408464 None:intergenic 30.0%
TCAGATGCAAAAATCACAAT+TGG - chr4_3:37408447-37408466 Msa0640020:intron 30.0%
CAGATGCAAAAATCACAATT+GGG - chr4_3:37408448-37408467 Msa0640020:intron 30.0%
GAATTAAAATGTACGTTTGC+AGG - chr4_3:37408811-37408830 Msa0640020:five_prime_UTR 30.0%
!! TCATTTTTCCTAAATTGGTG+TGG - chr4_3:37409150-37409169 Msa0640020:five_prime_UTR 30.0%
!! CTATCATTAATGTGGATTGG+TGG + chr4_3:37399133-37399152 None:intergenic 35.0%
! CTATCATTCCTTTTGGATTG+AGG + chr4_3:37399288-37399307 None:intergenic 35.0%
! AACCCTTCTATCATTCCTTT+TGG + chr4_3:37399295-37399314 None:intergenic 35.0%
TGGTTACATCTTTGGATAGA+AGG + chr4_3:37399353-37399372 None:intergenic 35.0%
TGGTTACATCTTTGGATAGA+AGG + chr4_3:37399353-37399372 None:intergenic 35.0%
AATATGTGGTGCAACATCAT+TGG + chr4_3:37399427-37399446 None:intergenic 35.0%
TCTTAGAAGCAGAGTTACAA+GGG + chr4_3:37399461-37399480 None:intergenic 35.0%
!!! GATCACATGGTACCTTTTTT+AGG + chr4_3:37399515-37399534 None:intergenic 35.0%
CCATTAATATAGGGATCACA+TGG + chr4_3:37399528-37399547 None:intergenic 35.0%
CCATGTGATCCCTATATTAA+TGG - chr4_3:37399525-37399544 Msa0640020:intron 35.0%
TCCTATATGAAACTTCCAGT+TGG + chr4_3:37400684-37400703 None:intergenic 35.0%
GTTAGGTATCAAAGAAACAG+TGG + chr4_3:37400888-37400907 None:intergenic 35.0%
TTGATTTATTTACCCGTGCT+TGG + chr4_3:37401501-37401520 None:intergenic 35.0%
!! GAGATGGGAGATTTTAATAG+AGG - chr4_3:37402391-37402410 Msa0640020:intron 35.0%
!! AGTGGTGGACAATTAGATAA+GGG + chr4_3:37402627-37402646 None:intergenic 35.0%
GTTAATTGCATTGCCAAACT+AGG + chr4_3:37402964-37402983 None:intergenic 35.0%
TCAAGAGATATTCTCGTTGT+TGG - chr4_3:37403118-37403137 Msa0640020:intron 35.0%
ATTAAGGAAGTTGCATCTCT+TGG - chr4_3:37403219-37403238 Msa0640020:intron 35.0%
TTCTATCGATAATCCGTAAC+AGG - chr4_3:37403259-37403278 Msa0640020:intron 35.0%
TGCCTGTAATTTGACAAGTT+TGG + chr4_3:37403388-37403407 None:intergenic 35.0%
CCCTTGAACCATTATCTAAA+AGG - chr4_3:37404046-37404065 Msa0640020:intron 35.0%
! TCGATATTGCACACTCATTT+TGG + chr4_3:37404125-37404144 None:intergenic 35.0%
TTCAAAACAGGAGTGGTAAA+TGG + chr4_3:37404412-37404431 None:intergenic 35.0%
TTGATGAATTGGAACTGTCA+AGG + chr4_3:37404567-37404586 None:intergenic 35.0%
GGATATGGTGTAACGTTTAA+AGG + chr4_3:37405450-37405469 None:intergenic 35.0%
! ACTCCATAGACCTTTTTGTT+TGG - chr4_3:37405675-37405694 Msa0640020:intron 35.0%
CTACCAAACAAAAAGGTCTA+TGG + chr4_3:37405681-37405700 None:intergenic 35.0%
ATAAACGACCAAAAGGTCTA+TGG + chr4_3:37405709-37405728 None:intergenic 35.0%
TTCCTAACACCTAATTCATC+TGG - chr4_3:37405903-37405922 Msa0640020:intron 35.0%
TCCTAACACCTAATTCATCT+GGG - chr4_3:37405904-37405923 Msa0640020:intron 35.0%
AGGTTAGAACAAAGGAACAA+AGG + chr4_3:37406060-37406079 None:intergenic 35.0%
CTCTAATGACCCAAAATTGA+AGG + chr4_3:37406131-37406150 None:intergenic 35.0%
! CGATAATCACCCATTTTCAT+TGG + chr4_3:37406862-37406881 None:intergenic 35.0%
TAATCTCTTTCATTAACCCC+GGG + chr4_3:37406949-37406968 None:intergenic 35.0%
GTAATCTCTTTCATTAACCC+CGG + chr4_3:37406950-37406969 None:intergenic 35.0%
! GTTTGACCTTGCTTAATTTG+AGG - chr4_3:37407243-37407262 Msa0640020:CDS 35.0%
AATCAAAACCGTTGGATCAT+TGG + chr4_3:37407345-37407364 None:intergenic 35.0%
AAGTACACATGGCAATCTTA+TGG + chr4_3:37407431-37407450 None:intergenic 35.0%
CTTCTATTCTCAAGTACACA+TGG + chr4_3:37407442-37407461 None:intergenic 35.0%
TGTGTACTTGAGAATAGAAG+AGG - chr4_3:37407442-37407461 Msa0640020:five_prime_UTR 35.0%
! AAAATCTAAAGCCTACACCA+TGG - chr4_3:37407582-37407601 Msa0640020:intron 35.0%
AGAATAGTGTCCAACTAAGT+TGG + chr4_3:37407942-37407961 None:intergenic 35.0%
TCTATACAGATAGCACTATC+AGG - chr4_3:37408174-37408193 Msa0640020:intron 35.0%
CAAGCACATTGATGAGATTA+AGG - chr4_3:37408224-37408243 Msa0640020:intron 35.0%
ACTTCCATCTGTGATTCTTA+AGG + chr4_3:37408376-37408395 None:intergenic 35.0%
GAATCAAACGATATCCGATA+TGG + chr4_3:37408530-37408549 None:intergenic 35.0%
GATGATTATCCACAAATACG+CGG - chr4_3:37408582-37408601 Msa0640020:intron 35.0%
AATAGAACTGAAAAATGGGC+TGG - chr4_3:37408642-37408661 Msa0640020:intron 35.0%
GAATAGAGACATTGTGAACA+AGG - chr4_3:37408833-37408852 Msa0640020:five_prime_UTR 35.0%
TGAACAAGGACATAGTAATG+TGG - chr4_3:37408847-37408866 Msa0640020:five_prime_UTR 35.0%
ATAGTAATGTGGCATGTAGT+GGG - chr4_3:37408858-37408877 Msa0640020:five_prime_UTR 35.0%
AATTCATCATGTTCCAACAC+AGG - chr4_3:37408881-37408900 Msa0640020:five_prime_UTR 35.0%
TGCTCAATAGTGGCATTATT+GGG + chr4_3:37408914-37408933 None:intergenic 35.0%
! TCAAATGAAGTGCTCAATAG+TGG + chr4_3:37408924-37408943 None:intergenic 35.0%
TTCCTCTCAAAGAAATTGGT+TGG + chr4_3:37408954-37408973 None:intergenic 35.0%
AGGATTCCTCTCAAAGAAAT+TGG + chr4_3:37408958-37408977 None:intergenic 35.0%
TGATCTATTCTCACTTCTAG+CGG - chr4_3:37409073-37409092 Msa0640020:five_prime_UTR 35.0%
TCGTGAAAGAAATGGTTGCA+TGG + chr4_3:37399209-37399228 None:intergenic 40.0%
! CTTTTGGATTGAGGAACTGT+TGG + chr4_3:37399279-37399298 None:intergenic 40.0%
CAACAGTTCCTCAATCCAAA+AGG - chr4_3:37399277-37399296 Msa0640020:CDS 40.0%
!!! CATGCGTGATTTTGGCTTTT+AGG + chr4_3:37399318-37399337 None:intergenic 40.0%
CATCTTTGGATAGAAGGAGT+CGG + chr4_3:37399347-37399366 None:intergenic 40.0%
ACAATGTGGTGCAACATCAT+TGG + chr4_3:37399373-37399392 None:intergenic 40.0%
CATCTTTGGATAGAAGGAGT+CGG + chr4_3:37399347-37399366 None:intergenic 40.0%
GTCTTAGAAGCAGAGTTACA+AGG + chr4_3:37399462-37399481 None:intergenic 40.0%
!! TGTAACTCTGCTTCTAAGAC+TGG - chr4_3:37399462-37399481 Msa0640020:intron 40.0%
!! GTAACTCTGCTTCTAAGACT+GGG - chr4_3:37399463-37399482 Msa0640020:intron 40.0%
GCCAACTGGAAGTTTCATAT+AGG - chr4_3:37400680-37400699 Msa0640020:intron 40.0%
ATAGGATTTGATGTACGAGC+TGG - chr4_3:37400698-37400717 Msa0640020:intron 40.0%
TCTTCTGTTGGATCTTGGTA+TGG + chr4_3:37400815-37400834 None:intergenic 40.0%
!! TTTTTCGATGCTGGAGAGTA+TGG - chr4_3:37400851-37400870 Msa0640020:intron 40.0%
GTATCAATGAAATGAGCGTG+TGG + chr4_3:37400923-37400942 None:intergenic 40.0%
CACAAATCGCATTCTTCAAG+AGG + chr4_3:37400976-37400995 None:intergenic 40.0%
ATAGTTTCCAACGGTGACTA+CGG + chr4_3:37401211-37401230 None:intergenic 40.0%
GATTGGGAGTTCAAAACAAG+TGG - chr4_3:37401243-37401262 Msa0640020:intron 40.0%
TTTGAATCCCGTCCTAAGAT+AGG - chr4_3:37401907-37401926 Msa0640020:intron 40.0%
ATAGCCTACCTATCTTAGGA+CGG + chr4_3:37401918-37401937 None:intergenic 40.0%
TCCAATCGGTCAAATAGAGA+TGG - chr4_3:37402375-37402394 Msa0640020:intron 40.0%
CCAATCGGTCAAATAGAGAT+GGG - chr4_3:37402376-37402395 Msa0640020:intron 40.0%
!! GAGTGGTGGACAATTAGATA+AGG + chr4_3:37402628-37402647 None:intergenic 40.0%
!!! GTGCAAGTTTTGGAAACCTT+CGG + chr4_3:37402854-37402873 None:intergenic 40.0%
! GGTTCAAGGGTAAACTCTTT+TGG + chr4_3:37404036-37404055 None:intergenic 40.0%
TGATTGCTTAACCATGTCCT+TGG - chr4_3:37405187-37405206 Msa0640020:intron 40.0%
GATTGCTTAACCATGTCCTT+GGG - chr4_3:37405188-37405207 Msa0640020:intron 40.0%
!! AGAATGATAAAGAGTGCCCA+AGG + chr4_3:37405207-37405226 None:intergenic 40.0%
! CGTTTAAAGGGTGTGTAACT+AGG + chr4_3:37405437-37405456 None:intergenic 40.0%
GGAGTCACTACCAAACAAAA+AGG + chr4_3:37405688-37405707 None:intergenic 40.0%
! TAGTGACTCCATAGACCTTT+TGG - chr4_3:37405698-37405717 Msa0640020:intron 40.0%
GATCATGGTTATCATGCCTT+GGG + chr4_3:37405768-37405787 None:intergenic 40.0%
AATTAGAATCCCACTGTTGG+AGG + chr4_3:37405790-37405809 None:intergenic 40.0%
ACCCAGATGAATTAGGTGTT+AGG + chr4_3:37405908-37405927 None:intergenic 40.0%
!!! GCTAGCAGCTGAATTTTTTC+CGG + chr4_3:37406017-37406036 None:intergenic 40.0%
CCTACTGAAGGTTAGAACAA+AGG + chr4_3:37406068-37406087 None:intergenic 40.0%
CCTTTGTTCTAACCTTCAGT+AGG - chr4_3:37406065-37406084 Msa0640020:intron 40.0%
! AGAAGGTATAAGAGTTTGGG+AGG - chr4_3:37407012-37407031 Msa0640020:CDS 40.0%
TTGTGCATCCAATGATCCAA+CGG - chr4_3:37407334-37407353 Msa0640020:five_prime_UTR 40.0%
TTCACAAAAAGAGGGCTTGA+TGG - chr4_3:37407711-37407730 Msa0640020:intron 40.0%
TGTCCTTAGGACACAAGTTA+AGG + chr4_3:37408067-37408086 None:intergenic 40.0%
! TCATGCTAACTTGTGTCCTT+AGG + chr4_3:37408080-37408099 None:intergenic 40.0%
AGGACACAAGTTAGCATGAT+CGG - chr4_3:37408081-37408100 Msa0640020:intron 40.0%
GATAGCACTATCAGGTATAC+TGG - chr4_3:37408182-37408201 Msa0640020:intron 40.0%
TTGGTATCAGCAAACAGCAT+TGG - chr4_3:37408264-37408283 Msa0640020:intron 40.0%
! TTAATCACGACTAGTTCAGC+TGG + chr4_3:37408480-37408499 None:intergenic 40.0%
TCGAACAAAAAAACTGCGGT+TGG - chr4_3:37408501-37408520 Msa0640020:intron 40.0%
CTCTATGTTGATCATAGTCG+CGG - chr4_3:37408669-37408688 Msa0640020:intron 40.0%
GAGATGACACTTTAGCTGTT+TGG - chr4_3:37408691-37408710 Msa0640020:intron 40.0%
CATAGTAATGTGGCATGTAG+TGG - chr4_3:37408857-37408876 Msa0640020:five_prime_UTR 40.0%
GTGCTCAATAGTGGCATTAT+TGG + chr4_3:37408915-37408934 None:intergenic 40.0%
!! CTCTAGGAGAAAGGGTTTTA+AGG + chr4_3:37408983-37409002 None:intergenic 40.0%
! TGCAACATCTCTAGGAGAAA+GGG + chr4_3:37408991-37409010 None:intergenic 40.0%
! ATGCAACATCTCTAGGAGAA+AGG + chr4_3:37408992-37409011 None:intergenic 40.0%
TTTCTCCTAGAGATGTTGCA+TGG - chr4_3:37408991-37409010 Msa0640020:five_prime_UTR 40.0%
!! TAGTTTTACTTGGGACAACC+AGG + chr4_3:37409017-37409036 None:intergenic 40.0%
CTTGCATTCATCATGCCTAT+CGG - chr4_3:37409044-37409063 Msa0640020:five_prime_UTR 40.0%
! GGACTCAACATGCGTGATTT+TGG + chr4_3:37399326-37399345 None:intergenic 45.0%
GGGTGTGTTGCAGGTAATTT+GGG + chr4_3:37399494-37399513 None:intergenic 45.0%
AGGGTGTGTTGCAGGTAATT+TGG + chr4_3:37399495-37399514 None:intergenic 45.0%
!!! CCTTTTTTAGGGTGTGTTGC+AGG + chr4_3:37399503-37399522 None:intergenic 45.0%
CCTGCAACACACCCTAAAAA+AGG - chr4_3:37399500-37399519 Msa0640020:intron 45.0%
! AGTGATGGAGAGGAATGCTT+GGG + chr4_3:37400009-37400028 None:intergenic 45.0%
! TAGTGATGGAGAGGAATGCT+TGG + chr4_3:37400010-37400029 None:intergenic 45.0%
GTTTATTCAGTTGGGCCAAC+TGG - chr4_3:37400666-37400685 Msa0640020:intron 45.0%
! GATGCTGGAGAGTATGGATT+TGG - chr4_3:37400857-37400876 Msa0640020:intron 45.0%
TCAATGAAATGAGCGTGTGG+TGG + chr4_3:37400920-37400939 None:intergenic 45.0%
AATACTTACCGAGGGCTTGA+TGG + chr4_3:37401271-37401290 None:intergenic 45.0%
TTATTTACCCGTGCTTGGCA+CGG + chr4_3:37401496-37401515 None:intergenic 45.0%
AATCCCGTCCTAAGATAGGT+AGG - chr4_3:37401911-37401930 Msa0640020:intron 45.0%
TAGCCTACCTATCTTAGGAC+GGG + chr4_3:37401917-37401936 None:intergenic 45.0%
ATGCTTCCTTAGGGTCCAAT+CGG - chr4_3:37402361-37402380 Msa0640020:intron 45.0%
ATTTGACCGATTGGACCCTA+AGG + chr4_3:37402370-37402389 None:intergenic 45.0%
CCCATCTCTATTTGACCGAT+TGG + chr4_3:37402379-37402398 None:intergenic 45.0%
AGGTACAAACGTTGGAGAAG+AGG + chr4_3:37402592-37402611 None:intergenic 45.0%
AACGAGCAAGGTACAAACGT+TGG + chr4_3:37402600-37402619 None:intergenic 45.0%
GATAAGGGATGAAACGAGCA+AGG + chr4_3:37402612-37402631 None:intergenic 45.0%
AATAGGATAGGAGGGAGAGA+AGG + chr4_3:37402812-37402831 None:intergenic 45.0%
GGGAGAGAAATAGGATAGGA+GGG + chr4_3:37402820-37402839 None:intergenic 45.0%
TGGGAGAGAAATAGGATAGG+AGG + chr4_3:37402821-37402840 None:intergenic 45.0%
CGATGGGAGAGAAATAGGAT+AGG + chr4_3:37402824-37402843 None:intergenic 45.0%
GTATGCGATGGGAGAGAAAT+AGG + chr4_3:37402829-37402848 None:intergenic 45.0%
ATGCTCTCTGCAATTGTGTG+CGG - chr4_3:37402995-37403014 Msa0640020:intron 45.0%
AACAAAGAACGGGAAAACGC+AGG - chr4_3:37403803-37403822 Msa0640020:intron 45.0%
AACAGGAGTGGTAAATGGTG+AGG + chr4_3:37404407-37404426 None:intergenic 45.0%
TTGCTAGCGGGATTCAAAAC+AGG + chr4_3:37404424-37404443 None:intergenic 45.0%
!! ATAAAGAGTGCCCAAGGACA+TGG + chr4_3:37405201-37405220 None:intergenic 45.0%
TGAGCTTAGTTCAGCTGGTA+AGG + chr4_3:37405563-37405582 None:intergenic 45.0%
TACCAGCTGAACTAAGCTCA+CGG - chr4_3:37405563-37405582 Msa0640020:intron 45.0%
AGCACGCTATGTTAATCCCA+AGG - chr4_3:37405749-37405768 Msa0640020:intron 45.0%
GGATCATGGTTATCATGCCT+TGG + chr4_3:37405769-37405788 None:intergenic 45.0%
TAACCATGATCCTCCAACAG+TGG - chr4_3:37405777-37405796 Msa0640020:intron 45.0%
AACCATGATCCTCCAACAGT+GGG - chr4_3:37405778-37405797 Msa0640020:intron 45.0%
CACGGTTACCCAGATGAATT+AGG + chr4_3:37405915-37405934 None:intergenic 45.0%
AAAATTCAGCTGCTAGCCAG+TGG - chr4_3:37406020-37406039 Msa0640020:intron 45.0%
AAATTCAGCTGCTAGCCAGT+GGG - chr4_3:37406021-37406040 Msa0640020:intron 45.0%
GGATGATTCTAAATGCCCAC+TGG + chr4_3:37406039-37406058 None:intergenic 45.0%
ACAGTCAGACCTTAGTTACC+CGG - chr4_3:37406928-37406947 Msa0640020:intron 45.0%
TCATTAACCCCGGGTAACTA+AGG + chr4_3:37406940-37406959 None:intergenic 45.0%
GACTAGGGTTCCAACTTAGT+TGG - chr4_3:37407929-37407948 Msa0640020:intron 45.0%
!! GCTCCTTAACTTGTGTCCTA+AGG - chr4_3:37408061-37408080 Msa0640020:intron 45.0%
AAGTGCAAGGACATGCAAGT+GGG + chr4_3:37408117-37408136 None:intergenic 45.0%
AAAGTGCAAGGACATGCAAG+TGG + chr4_3:37408118-37408137 None:intergenic 45.0%
ACTGCGGTTGGAAACCATAT+CGG - chr4_3:37408513-37408532 Msa0640020:intron 45.0%
AGTGAATGAGCAGGAATTGC+TGG + chr4_3:37408552-37408571 None:intergenic 45.0%
TCGGTTAGAAGTGAATGAGC+AGG + chr4_3:37408561-37408580 None:intergenic 45.0%
GTAAATGCACCGCGTATTTG+TGG + chr4_3:37408594-37408613 None:intergenic 45.0%
!! AGAACTGAAAAATGGGCTGG+TGG - chr4_3:37408645-37408664 Msa0640020:intron 45.0%
ATTGGGAAGTCTTCCTGTGT+TGG + chr4_3:37408897-37408916 None:intergenic 45.0%
TGAGCACTTCATTTGAGCTC+AGG - chr4_3:37408928-37408947 Msa0640020:five_prime_UTR 45.0%
GGCCAACCAATTTCTTTGAG+AGG - chr4_3:37408949-37408968 Msa0640020:five_prime_UTR 45.0%
!!! GGAGAAAGGGTTTTAAGGAC+AGG + chr4_3:37408978-37408997 None:intergenic 45.0%
CATTCATCATGCCTATCGGA+CGG - chr4_3:37409048-37409067 Msa0640020:five_prime_UTR 45.0%
AATAGATCAGACCGTCCGAT+AGG + chr4_3:37409062-37409081 None:intergenic 45.0%
AGCAAGCACCACACCAATTT+AGG + chr4_3:37409161-37409180 None:intergenic 45.0%
!! AAAATTATATTTAAATCTAA+GGG + chr4_3:37399579-37399598 None:intergenic 5.0%
!! AAAAATTATATTTAAATCTA+AGG + chr4_3:37399580-37399599 None:intergenic 5.0%
!!! ACTTTTAAATATATATAAAT+AGG + chr4_3:37400169-37400188 None:intergenic 5.0%
!! AGTTTAATAAAATAAATTTA+CGG - chr4_3:37400186-37400205 Msa0640020:intron 5.0%
!!! ACTTTTAAATATATATAAAT+AGG + chr4_3:37400169-37400188 None:intergenic 5.0%
!! ATTAATTATTAAATTAAGTT+TGG + chr4_3:37401080-37401099 None:intergenic 5.0%
!! TATAAATAAAAATTTATACA+CGG + chr4_3:37402114-37402133 None:intergenic 5.0%
!! AATAATAAGAATAAAAATAA+AGG - chr4_3:37403996-37404015 Msa0640020:intron 5.0%
!! ATAATAAGAATAAAAATAAA+GGG - chr4_3:37403997-37404016 Msa0640020:intron 5.0%
!!! TATTTTTATTGATTTAATTA+TGG + chr4_3:37405280-37405299 None:intergenic 5.0%
AGGAGTCGGACTCAACAATG+TGG + chr4_3:37399387-37399406 None:intergenic 50.0%
!! CTCTGCTTCTAAGACTGGGA+AGG - chr4_3:37399467-37399486 Msa0640020:intron 50.0%
!! TGTGGTGGACAATCACGGTT+AGG + chr4_3:37400905-37400924 None:intergenic 50.0%
ATCGCATTCTTCAAGAGGCG+TGG + chr4_3:37400971-37400990 None:intergenic 50.0%
AAGTGGTTCCATCAAGCCCT+CGG - chr4_3:37401260-37401279 Msa0640020:intron 50.0%
TATTTACCCGTGCTTGGCAC+GGG + chr4_3:37401495-37401514 None:intergenic 50.0%
AAAAGAGGGGCGATGAGAGA+AGG - chr4_3:37402455-37402474 Msa0640020:intron 50.0%
AAAGAGGGGCGATGAGAGAA+GGG - chr4_3:37402456-37402475 Msa0640020:intron 50.0%
AACCTTCGGCAGTATGCGAT+GGG + chr4_3:37402840-37402859 None:intergenic 50.0%
AAACCTTCGGCAGTATGCGA+TGG + chr4_3:37402841-37402860 None:intergenic 50.0%
AGCGGGATTCAAAACAGGAG+TGG + chr4_3:37404419-37404438 None:intergenic 50.0%
ACCAGCTGAACTAAGCTCAC+GGG - chr4_3:37405564-37405583 Msa0640020:intron 50.0%
ATCCCACTGTTGGAGGATCA+TGG + chr4_3:37405783-37405802 None:intergenic 50.0%
CAGTCAGACCTTAGTTACCC+GGG - chr4_3:37406929-37406948 Msa0640020:intron 50.0%
AGTCAGACCTTAGTTACCCG+GGG - chr4_3:37406930-37406949 Msa0640020:intron 50.0%
TACACCATGGCAATTCGCGT+GGG - chr4_3:37407595-37407614 Msa0640020:intron 50.0%
TTAACCCACGCGAATTGCCA+TGG + chr4_3:37407602-37407621 None:intergenic 50.0%
!! GAGCGTGTGGTGGACAATCA+CGG + chr4_3:37400910-37400929 None:intergenic 55.0%
GTTCGAACCGTAGTCACCGT+TGG - chr4_3:37401201-37401220 Msa0640020:intron 55.0%
GGCGATGAGAGAAGGGAATG+AGG - chr4_3:37402463-37402482 Msa0640020:intron 55.0%
AGAGAGAGCAGGCGACATAG+TGG + chr4_3:37402652-37402671 None:intergenic 55.0%
GAGAGAGAGAGAGAGAGAGC+AGG + chr4_3:37402663-37402682 None:intergenic 55.0%
GGAGAGAAGGAAGAGAGGCA+GGG + chr4_3:37402799-37402818 None:intergenic 55.0%
AGGAGGGAGAGAAGGAAGAG+AGG + chr4_3:37402804-37402823 None:intergenic 55.0%
CCAGCTGAACTAAGCTCACG+GGG - chr4_3:37405565-37405584 Msa0640020:intron 55.0%
CACGCGAATTGCCATGGTGT+AGG + chr4_3:37407596-37407615 None:intergenic 55.0%
CTACACCATGGCAATTCGCG+TGG - chr4_3:37407594-37407613 Msa0640020:intron 55.0%
CATACGCAACGACACGACAG+AGG + chr4_3:37407779-37407798 None:intergenic 55.0%
CCAGGCCATGCAACATCTCT+AGG + chr4_3:37408999-37409018 None:intergenic 55.0%
CCTAGAGATGTTGCATGGCC+TGG - chr4_3:37408996-37409015 Msa0640020:five_prime_UTR 55.0%
TATGGAGCCCGTGCCAAGCA+CGG - chr4_3:37401485-37401504 Msa0640020:intron 60.0%
! GGCGACATAGTGGAGAGTGG+TGG + chr4_3:37402642-37402661 None:intergenic 60.0%
! GCAGGCGACATAGTGGAGAG+TGG + chr4_3:37402645-37402664 None:intergenic 60.0%
AGGCAGGGTCATGTCAGAGG+CGG + chr4_3:37402784-37402803 None:intergenic 60.0%
GAGAGGCAGGGTCATGTCAG+AGG + chr4_3:37402787-37402806 None:intergenic 60.0%
GGGAGAGAAGGAAGAGAGGC+AGG + chr4_3:37402800-37402819 None:intergenic 60.0%
CTCCCATCGCATACTGCCGA+AGG - chr4_3:37402835-37402854 Msa0640020:intron 60.0%
CCCCGTGAGCTTAGTTCAGC+TGG + chr4_3:37405568-37405587 None:intergenic 60.0%
ATGGAGCCCGTGCCAAGCAC+GGG - chr4_3:37401486-37401505 Msa0640020:intron 65.0%
GTCATGTCAGAGGCGGGTGG+TGG + chr4_3:37402777-37402796 None:intergenic 65.0%
AGGGTCATGTCAGAGGCGGG+TGG + chr4_3:37402780-37402799 None:intergenic 65.0%
GGCAGGGTCATGTCAGAGGC+GGG + chr4_3:37402783-37402802 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 37399013 37409234 37399013 ID=Msa0640020;Name=Msa0640020
chr4_3 mRNA 37399013 37409234 37399013 ID=Msa0640020-mRNA-1;Parent=Msa0640020;Name=Msa0640020-mRNA-1;_AED=0.12;_eAED=0.12;_QI=817|0.5|0.42|1|0.33|0.14|7|203|297
chr4_3 exon 37399013 37399414 37399013 ID=Msa0640020-mRNA-1:exon:8580;Parent=Msa0640020-mRNA-1
chr4_3 exon 37399526 37399694 37399526 ID=Msa0640020-mRNA-1:exon:8579;Parent=Msa0640020-mRNA-1
chr4_3 exon 37399707 37399904 37399707 ID=Msa0640020-mRNA-1:exon:8578;Parent=Msa0640020-mRNA-1
chr4_3 exon 37399911 37400064 37399911 ID=Msa0640020-mRNA-1:exon:8577;Parent=Msa0640020-mRNA-1
chr4_3 exon 37406966 37407065 37406966 ID=Msa0640020-mRNA-1:exon:8576;Parent=Msa0640020-mRNA-1
chr4_3 exon 37407190 37407571 37407190 ID=Msa0640020-mRNA-1:exon:8575;Parent=Msa0640020-mRNA-1
chr4_3 exon 37408726 37409234 37408726 ID=Msa0640020-mRNA-1:exon:8574;Parent=Msa0640020-mRNA-1
chr4_3 five_prime_UTR 37408726 37409234 37408726 ID=Msa0640020-mRNA-1:five_prime_utr;Parent=Msa0640020-mRNA-1
chr4_3 five_prime_UTR 37407264 37407571 37407264 ID=Msa0640020-mRNA-1:five_prime_utr;Parent=Msa0640020-mRNA-1
chr4_3 CDS 37407190 37407263 37407190 ID=Msa0640020-mRNA-1:cds;Parent=Msa0640020-mRNA-1
chr4_3 CDS 37406966 37407065 37406966 ID=Msa0640020-mRNA-1:cds;Parent=Msa0640020-mRNA-1
chr4_3 CDS 37399911 37400064 37399911 ID=Msa0640020-mRNA-1:cds;Parent=Msa0640020-mRNA-1
chr4_3 CDS 37399707 37399904 37399707 ID=Msa0640020-mRNA-1:cds;Parent=Msa0640020-mRNA-1
chr4_3 CDS 37399526 37399694 37399526 ID=Msa0640020-mRNA-1:cds;Parent=Msa0640020-mRNA-1
chr4_3 CDS 37399216 37399414 37399216 ID=Msa0640020-mRNA-1:cds;Parent=Msa0640020-mRNA-1
chr4_3 three_prime_UTR 37399013 37399215 37399013 ID=Msa0640020-mRNA-1:three_prime_utr;Parent=Msa0640020-mRNA-1
Gene Sequence

>Msa0640020

ATGCGATTTGTGTTTTTGAACAATATGGTAGTATTATGTGACGTCACACTGAAACTAGCATTCCTAATGAATTTAACCGAAGTGAATTTGATTGTTCGAACCGTAGTCACCGTTGGAAACTATGACAATGTTTTAGATTGGGAGTTCAAAACAAGTGGTTCCATCAAGCCCTCGATAGCACTATCAGGTATACTGGAAATTAAGGCAACAAACATCAAGCACATTGATGAGATTAAGGGAGAATTATATGGTAAATTGGTATCAGCAAACAGCATTGGAATTTACCATGACCATTTCTACATTTACTATCTTGATTTTGATATCGACGAAAACTCGTTTGAGAAAACAAGTTTAAAAACCTTAAGAATCACAGATGGAAGTTCAAAAAGAAAGAGTTATTGGACAACTGAGACTCAAACTGCTAAGACCGAATCAGATGCAAAAATCACAATTGGGTCTGCTCCAGCTGAACTAGTCGTGATTAATTCGAACAAAAAAACTGCGGTTGGAAACCATATCGGATATCCAATTCCTGCTCATTCACTTCTAACCGAAGATGATTATCCACAAATACGCGGTGCATTTACCAATTATAATGTTTGGATCACACCTTATAATAGAACTGAAAAATGGGCTGGTGGACTCTATGTTGATCATAGTCGCGGAGATGACACTTTAGCTGTTTGGACCAAACAGAATAGAGACATTGTGAACAAGGACATAGTAATGTGGCATGTAGTGGGAATTCATCATGTTCCAACACAGGAAGACTTCCCAATAATGCCACTATTGAGCACTTCATTTGAGCTCAGGCCAACCAATTTCTTTGAGAGGAATCCTGTCCTTAAAACCCTTTCTCCTAGAGATGTTGCATGGCCTGGTTGTCCCAAGTAA
Protein sequence

>Msa0640020

MRFVFLNNMVVLCDVTLKLAFLMNLTEVNLIVRTVVTVGNYDNVLDWEFKTSGSIKPSIALSGILEIKATNIKHIDEIKGELYGKLVSANSIGIYHDHFYIYYLDFDIDENSFEKTSLKTLRITDGSSKRKSYWTTETQTAKTESDAKITIGSAPAELVVINSNKKTAVGNHIGYPIPAHSLLTEDDYPQIRGAFTNYNVWITPYNRTEKWAGGLYVDHSRGDDTLAVWTKQNRDIVNKDIVMWHVVGIHHVPTQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSPRDVAWPGCPK*