AlfalfaGEDB | Msa0641100

M. sativa cultivar zhongmu-4 / Msa0641100

KEGG: -
GO: GO:0000166 GO:0000959 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003723 GO:0005488 GO:0005507 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009451 GO:0009628 GO:0009631 GO:0009651 GO:0009791 GO:0009845 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010035 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016070 GO:0017076 GO:0019219 GO:0019222 GO:0030554 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031554 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0034336 GO:0034641 GO:0035639 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043242 GO:0043244 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0046483 GO:0046872 GO:0046914 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0060567 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090351 GO:0097159 GO:0097367 GO:1900864 GO:1901265 GO:1901360 GO:1901363 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
PFAM: PF00076.25

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0641100	XP_003601657.1	72.109	147	10	1	1	147	1	116	2.13e-65	206

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0641100	sp\|Q9LIS2\|RBG4_ARATH	49.669	151	43	3	1	150	1	119	1.42e-40	136

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0641100	Msa0925190	0.800250	1.573999e-48	-8.615850e-47
Msa0641100	Msa1069220	0.812012	5.250856e-51	-8.615850e-47
Msa0641100	Msa1148000	0.801160	1.026437e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0641100	MtrunA17_Chr3g0121631	72.109	147	10	1	1	147	1	116	1.96e-69	206
Msa0641100	MtrunA17_Chr4g0061451	43.312	157	48	5	1	150	1	123	3.26e-30	110
Msa0641100	MtrunA17_Chr7g0219021	40.127	157	55	4	1	152	1	123	8.60e-29	106
Msa0641100	MtrunA17_Chr3g0086861	38.562	153	67	5	1	152	1	127	2.42e-25	100
Msa0641100	MtrunA17_Chr3g0119311	50.633	79	38	1	71	148	40	118	3.89e-22	86.3
Msa0641100	MtrunA17_Chr7g0219031	38.571	140	46	4	1	133	1	107	1.36e-21	84.3
Msa0641100	MtrunA17_Chr4g0035001	52.055	73	34	1	71	142	10	82	1.94e-21	85.1
Msa0641100	MtrunA17_Chr4g0035051	50.000	74	36	1	71	143	12	85	2.98e-20	80.9
Msa0641100	MtrunA17_Chr4g0035031	50.685	73	35	1	71	142	12	84	5.50e-19	79.7
Msa0641100	MtrunA17_Chr7g0266751	36.752	117	64	3	27	142	1	108	5.88e-19	78.2
Msa0641100	MtrunA17_Chr3g0116631	47.727	88	42	2	66	152	205	289	7.26e-19	81.3
Msa0641100	MtrunA17_Chr4g0031091	33.588	131	55	2	15	144	12	111	7.45e-17	72.0
Msa0641100	MtrunA17_Chr2g0278661	50.000	74	36	1	71	143	11	84	4.44e-16	72.8
Msa0641100	MtrunA17_Chr1g0181111	50.000	76	37	1	71	145	200	275	1.05e-15	72.4
Msa0641100	MtrunA17_Chr4g0042161	43.373	83	43	2	71	152	55	134	5.47e-15	67.8
Msa0641100	MtrunA17_Chr4g0058151	46.835	79	38	2	73	150	222	297	8.53e-15	70.1
Msa0641100	MtrunA17_Chr4g0050781	40.476	84	49	1	71	153	11	94	2.66e-13	65.1
Msa0641100	MtrunA17_Chr7g0263001	43.210	81	43	2	71	150	39	117	3.67e-13	63.2
Msa0641100	MtrunA17_Chr1g0168601	43.421	76	42	1	73	147	159	234	7.39e-13	63.9
Msa0641100	MtrunA17_Chr1g0198431	36.471	85	51	2	71	154	196	278	7.92e-13	64.7
Msa0641100	MtrunA17_Chr3g0101061	43.421	76	42	1	71	146	44	118	1.57e-12	64.3
Msa0641100	MtrunA17_Chr7g0268551	39.744	78	42	2	76	148	353	430	1.78e-12	63.9
Msa0641100	MtrunA17_Chr1g0201001	34.066	91	59	1	71	160	33	123	2.22e-12	63.9
Msa0641100	MtrunA17_Chr1g0163591	40.506	79	46	1	71	149	166	243	2.96e-12	63.5
Msa0641100	MtrunA17_Chr4g0017401	35.556	90	53	1	71	155	20	109	3.09e-12	62.8
Msa0641100	MtrunA17_Chr6g0481071	34.211	76	49	1	71	145	99	174	7.49e-12	60.5
Msa0641100	MtrunA17_Chr2g0327921	37.179	78	48	1	71	147	11	88	1.01e-11	58.2
Msa0641100	MtrunA17_Chr3g0110211	44.595	74	39	2	71	142	116	189	1.74e-11	61.2
Msa0641100	MtrunA17_Chr4g0038111	35.870	92	58	1	71	162	343	433	1.98e-11	61.2
Msa0641100	MtrunA17_Chr3g0144311	36.250	80	50	1	71	149	33	112	2.74e-11	60.1
Msa0641100	MtrunA17_Chr4g0042151	39.474	76	45	1	71	145	48	123	2.80e-11	58.9
Msa0641100	MtrunA17_Chr7g0267571	41.250	80	46	1	73	151	218	297	3.13e-11	60.1
Msa0641100	MtrunA17_Chr5g0447761	38.158	76	46	1	71	146	10	84	6.92e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0641100	AT3G23830.2	49.669	151	43	3	1	150	1	119	1.45e-41	136
Msa0641100	AT3G23830.1	49.669	151	43	3	1	150	1	119	1.45e-41	136
Msa0641100	AT4G13850.3	49.007	151	44	3	1	150	1	119	4.15e-40	132
Msa0641100	AT4G13850.2	49.007	151	44	3	1	150	1	119	5.43e-40	132
Msa0641100	AT4G13850.1	49.007	151	44	3	1	150	1	119	6.29e-40	132
Msa0641100	AT4G13850.4	48.649	148	43	3	1	147	1	116	3.73e-38	127
Msa0641100	AT5G61030.2	44.667	150	47	3	1	145	1	119	1.65e-32	117
Msa0641100	AT5G61030.1	44.667	150	47	3	1	145	1	119	1.65e-32	117
Msa0641100	AT5G47320.1	46.000	150	44	4	1	149	1	114	2.36e-30	109
Msa0641100	AT1G74230.1	43.056	144	49	2	1	144	1	111	5.12e-30	110
Msa0641100	AT3G08000.1	56.962	79	33	1	71	148	45	123	2.00e-22	87.4
Msa0641100	AT2G21660.2	50.000	74	36	1	71	143	12	85	8.39e-19	78.6
Msa0641100	AT2G21660.1	50.000	74	36	1	71	143	12	85	1.23e-18	78.6
Msa0641100	AT5G06210.1	48.276	87	42	2	71	156	38	122	2.43e-18	77.0
Msa0641100	AT4G39260.3	40.426	94	44	2	71	163	10	92	1.14e-17	73.9
Msa0641100	AT2G37220.1	51.316	76	36	1	71	145	208	283	2.03e-17	77.4
Msa0641100	AT5G59865.1	41.667	96	50	2	58	147	12	107	6.80e-17	72.4
Msa0641100	AT3G53460.1	50.000	76	37	1	71	145	261	336	2.83e-16	75.1
Msa0641100	AT3G53460.3	50.000	76	37	1	71	145	261	336	2.83e-16	75.1
Msa0641100	AT3G53460.2	50.000	76	37	1	71	145	261	336	2.83e-16	75.1
Msa0641100	AT3G53460.4	50.000	76	37	1	71	145	282	357	2.86e-16	75.1
Msa0641100	AT4G24770.1	46.988	83	41	2	71	152	248	328	5.39e-16	73.9
Msa0641100	AT4G24770.2	46.988	83	41	2	71	152	248	328	5.39e-16	73.9
Msa0641100	AT5G50250.1	47.297	74	38	1	73	145	213	286	9.51e-16	73.2
Msa0641100	AT4G39260.2	42.466	73	41	1	71	142	10	82	7.12e-15	67.4
Msa0641100	AT4G39260.1	42.466	73	41	1	71	142	10	82	1.79e-14	67.4
Msa0641100	AT3G26420.1	45.570	79	42	1	71	148	11	89	2.26e-14	68.6
Msa0641100	AT2G37510.1	47.692	65	33	1	71	134	38	102	6.19e-14	65.5
Msa0641100	AT1G48920.1	39.362	94	52	2	74	162	304	397	1.55e-13	67.8
Msa0641100	AT3G52380.1	46.667	75	39	1	73	146	225	299	2.19e-13	66.6
Msa0641100	AT3G46020.1	42.667	75	42	1	71	144	11	85	2.29e-13	63.2
Msa0641100	AT5G54580.1	42.857	77	43	1	71	146	60	136	9.59e-13	62.8
Msa0641100	AT4G13860.1	47.761	67	34	1	74	139	10	76	2.23e-12	60.1
Msa0641100	AT1G22910.2	36.667	90	52	1	71	155	17	106	2.83e-12	62.8
Msa0641100	AT1G18630.1	44.595	74	40	1	71	143	40	113	2.86e-12	61.6
Msa0641100	AT1G22910.3	35.556	90	58	0	71	160	17	106	2.99e-12	63.5
Msa0641100	AT2G21690.1	41.429	70	40	1	71	139	11	80	3.94e-12	60.1
Msa0641100	AT1G22910.1	36.667	90	52	1	71	155	17	106	4.07e-12	62.8
Msa0641100	AT1G60000.1	46.667	75	39	1	73	146	183	257	4.98e-12	62.4
Msa0641100	AT4G13860.2	49.153	59	29	1	83	140	2	60	8.49e-12	58.2
Msa0641100	AT1G54080.1	44.286	70	38	1	74	142	155	224	9.58e-12	62.4
Msa0641100	AT1G76460.1	41.538	65	38	0	71	135	28	92	9.90e-12	62.0
Msa0641100	AT3G20930.1	36.364	88	52	2	71	154	286	373	1.18e-11	62.0
Msa0641100	AT3G14100.1	44.286	70	38	1	74	142	151	220	1.76e-11	61.6
Msa0641100	AT4G39260.4	41.818	55	32	0	71	125	10	64	2.31e-11	57.8
Msa0641100	AT5G55550.5	38.158	76	46	1	71	146	10	84	3.27e-11	60.8
Msa0641100	AT5G55550.4	38.158	76	46	1	71	146	10	84	3.27e-11	60.8
Msa0641100	AT5G55550.9	38.158	76	46	1	71	146	10	84	3.27e-11	60.8
Msa0641100	AT5G55550.7	38.158	76	46	1	71	146	10	84	3.27e-11	60.8
Msa0641100	AT5G55550.1	38.158	76	46	1	71	146	10	84	3.27e-11	60.8
Msa0641100	AT5G55550.2	38.158	76	46	1	71	146	10	84	3.39e-11	60.8
Msa0641100	AT5G55550.3	38.158	76	46	1	71	146	10	84	3.39e-11	60.8
Msa0641100	AT5G55550.6	38.158	76	46	1	71	146	10	84	3.39e-11	60.8
Msa0641100	AT5G55550.11	38.158	76	46	1	71	146	10	84	3.39e-11	60.8
Msa0641100	AT1G22330.1	37.500	96	52	2	73	160	23	118	3.96e-11	60.1
Msa0641100	AT5G55550.8	40.299	67	39	1	71	137	10	75	6.76e-11	60.1
Msa0641100	AT5G55550.10	40.299	67	39	1	71	137	10	75	7.07e-11	60.1
Msa0641100	AT2G22100.1	38.272	81	49	1	71	150	167	247	9.36e-11	59.3

Find 65 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGTGGTCGTTGGCACATTT+TGG	0.248919	4_3:+40909866	Msa0641100:three_prime_UTR
GCACGAAAACTGCAGTATTT+AGG	0.268167	4_3:+40910000	Msa0641100:three_prime_UTR
ACTAATAAAATGTATGGTTT+TGG	0.271955	4_3:+40909200	Msa0641100:CDS
AGCTAAGTCTTCAATCAAAA+TGG	0.296905	4_3:+40909002	Msa0641100:exon
CGTCCTGGAGGTGGTGGATA+TGG	0.304399	4_3:+40909704	Msa0641100:CDS
ACTGGAAGATCAAGGGGATT+TGG	0.318688	4_3:+40909485	Msa0641100:CDS
CTTCACACACGGCAAGATAA+TGG	0.333515	4_3:-40910055	None:intergenic
CACTAATTAGTGAAATGTTA+TGG	0.354627	4_3:+40909839	Msa0641100:three_prime_UTR
AAAATTATATGAAGTTGTTA+TGG	0.356139	4_3:+40909802	Msa0641100:three_prime_UTR
TTGCAGGTTCCATTGCTACT+AGG	0.366939	4_3:+40908498	None:intergenic
TTTCATTGGAGGTATTGATT+TGG	0.367627	4_3:+40909134	Msa0641100:CDS
TATGTCACTAATAAAATGTA+TGG	0.373215	4_3:+40909194	Msa0641100:CDS
ATGGCTTTCTGTAACAAGAT+TGG	0.374404	4_3:+40909021	Msa0641100:CDS
AAACAGGAGCTTGAGTGCTC+TGG	0.387762	4_3:-40909068	None:intergenic
GGTGGATATGGTGGCGGCGG+CGG	0.393128	4_3:+40909716	Msa0641100:CDS
GGATATGGTGGCGGCGGCGG+TGG	0.402903	4_3:+40909719	Msa0641100:CDS
AAGGATGCATTTACAACTTA+CGG	0.405921	4_3:+40909270	Msa0641100:CDS
TAAATGCATCCTTAAGAGAT+TGG	0.410716	4_3:-40909260	None:intergenic
GCAGTATTTAGGTATACTTT+TGG	0.417224	4_3:+40910011	Msa0641100:three_prime_UTR
ATGGTGGCGGCGGCGGTGGT+TGG	0.422024	4_3:+40909723	Msa0641100:CDS
GTCATCACTGATAGAGATAC+TGG	0.423474	4_3:+40909467	Msa0641100:CDS
TATGCAAATGATAGACAATC+TGG	0.431106	4_3:+40909677	Msa0641100:CDS
TGTTGATGACCAATCTCTTA+AGG	0.440874	4_3:+40909251	Msa0641100:CDS
ATGGGTGTCATCGTAATAAT+CGG	0.447418	4_3:-40910133	None:intergenic
TAGTTAAGCATGGATGAAAC+AGG	0.461015	4_3:-40909084	None:intergenic
TGCAGGTTCCATTGCTACTA+GGG	0.474372	4_3:+40908499	None:intergenic
CTTGTTCATTAGGATTTAAG+TGG	0.474865	4_3:+40909635	Msa0641100:intron
CTAATTAGTGACTGACCACT+TGG	0.476734	4_3:-40909826	None:intergenic
GGACCTCGTCCTGGAGGTGG+TGG	0.480219	4_3:+40909698	Msa0641100:CDS
AGCACTTGCTATGGATGGAC+AGG	0.481782	4_3:+40909544	Msa0641100:CDS
ATAGAGATACTGGAAGATCA+AGG	0.490612	4_3:+40909477	Msa0641100:CDS
AACTTACGGAGAGGTGATTG+AGG	0.511408	4_3:+40909284	Msa0641100:CDS
AGACAATCTGGACCTCGTCC+TGG	0.512735	4_3:+40909689	Msa0641100:CDS
TGCAACTTCAGCACTTGCTA+TGG	0.519690	4_3:+40909535	Msa0641100:CDS
CCTGGAGGTGGTGGATATGG+TGG	0.525446	4_3:+40909707	Msa0641100:CDS
GGTGGTGGATATGGTGGCGG+CGG	0.526886	4_3:+40909713	Msa0641100:CDS
GGTCATCAACATGGTAAGAA+AGG	0.527893	4_3:-40909239	None:intergenic
AACAGGAGCTTGAGTGCTCT+GGG	0.528551	4_3:-40909067	None:intergenic
TCTGGACCTCGTCCTGGAGG+TGG	0.529949	4_3:+40909695	Msa0641100:CDS
TAAGATAGAAGAATGTTATG+TGG	0.537955	4_3:+40909932	Msa0641100:three_prime_UTR
GGAGGTGGTGGATATGGTGG+CGG	0.550213	4_3:+40909710	Msa0641100:CDS
ATCATTTGATGATGGTGCAT+TGG	0.553793	4_3:+40910100	Msa0641100:three_prime_UTR
CCACCATATCCACCACCTCC+AGG	0.555026	4_3:-40909707	None:intergenic
CGGCAAGATAATGGAAACAT+TGG	0.556133	4_3:-40910046	None:intergenic
GGGTAGCACCTTGCCTCAAG+AGG	0.565523	4_3:-40909047	None:intergenic
ACTTCAGCACTTGCTATGGA+TGG	0.567247	4_3:+40909539	Msa0641100:CDS
TAGAGATACTGGAAGATCAA+GGG	0.573039	4_3:+40909478	Msa0641100:CDS
GTCTATGAAGATTCTGTGCG+TGG	0.578823	4_3:-40908528	None:intergenic
GCTTGCGCATCATTTGATGA+TGG	0.589775	4_3:+40910092	Msa0641100:intron
AGATTGTCTATCATTTGCAT+AGG	0.589972	4_3:-40909675	None:intergenic
GGTTGTAACCCTAGTAGCAA+TGG	0.593911	4_3:-40908507	None:intergenic
AGAGATACTGGAAGATCAAG+GGG	0.597046	4_3:+40909479	Msa0641100:CDS
TATCCACCACCTCCAGGACG+AGG	0.602981	4_3:-40909701	None:intergenic
TTGTTCATTAGGATTTAAGT+GGG	0.603831	4_3:+40909636	Msa0641100:intron
ACTTACGGAGAGGTGATTGA+GGG	0.606154	4_3:+40909285	Msa0641100:CDS
TAAGAGATTGGTCATCAACA+TGG	0.620940	4_3:-40909248	None:intergenic
GTGGCGCAAGTAGTTAAGCA+TGG	0.622132	4_3:-40909094	None:intergenic
ATTGGAAGCCTCTTGAGGCA+AGG	0.631105	4_3:+40909039	Msa0641100:CDS
ACAAGATTGGAAGCCTCTTG+AGG	0.634334	4_3:+40909034	Msa0641100:CDS
TAGACACAAGAACTCAACAC+AGG	0.651558	4_3:-40909779	None:intergenic
TGCATTTACAACTTACGGAG+AGG	0.657531	4_3:+40909275	Msa0641100:CDS
TGAAGTTGTTATGGCCCAAG+TGG	0.659034	4_3:+40909811	Msa0641100:three_prime_UTR
TAATTAGTGACTGACCACTT+GGG	0.664151	4_3:-40909825	None:intergenic
CAATCTGGACCTCGTCCTGG+AGG	0.667072	4_3:+40909692	Msa0641100:CDS
AAAGCTTGCTTGAAGACATG+TGG	0.718559	4_3:-40909113	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTATCTAATTTCCTATT+AGG	+	chr4_3:40908744-40908763	Msa0641100:intron	15.0%
!!	ACATGCTATAATTTAAATTT+GGG	+	chr4_3:40909358-40909377	Msa0641100:intron	15.0%
!!	AAAATTATATGAAGTTGTTA+TGG	+	chr4_3:40909802-40909821	Msa0641100:three_prime_UTR	15.0%
!!!	TTTTTATCTAATTTCCTATT+AGG	+	chr4_3:40908744-40908763	Msa0641100:intron	15.0%
!!	ACATGCTATAATTTAAATTT+GGG	+	chr4_3:40909358-40909377	Msa0641100:intron	15.0%
!!	AAAATTATATGAAGTTGTTA+TGG	+	chr4_3:40909802-40909821	Msa0641100:three_prime_UTR	15.0%
!!	TATGTCACTAATAAAATGTA+TGG	+	chr4_3:40909194-40909213	Msa0641100:CDS	20.0%
!!!	ACTAATAAAATGTATGGTTT+TGG	+	chr4_3:40909200-40909219	Msa0641100:CDS	20.0%
!!	GACATGCTATAATTTAAATT+TGG	+	chr4_3:40909357-40909376	Msa0641100:intron	20.0%
!!!	ATCTTATTTTCAAAGTTAGA+AGG	-	chr4_3:40909918-40909937	None:intergenic	20.0%
!!	TATGTCACTAATAAAATGTA+TGG	+	chr4_3:40909194-40909213	Msa0641100:CDS	20.0%
!!!	ACTAATAAAATGTATGGTTT+TGG	+	chr4_3:40909200-40909219	Msa0641100:CDS	20.0%
!!	GACATGCTATAATTTAAATT+TGG	+	chr4_3:40909357-40909376	Msa0641100:intron	20.0%
!!!	ATCTTATTTTCAAAGTTAGA+AGG	-	chr4_3:40909918-40909937	None:intergenic	20.0%
!	ATTAGATAAAAACAGAGGTA+GGG	-	chr4_3:40908736-40908755	None:intergenic	25.0%
!	AATTAGATAAAAACAGAGGT+AGG	-	chr4_3:40908737-40908756	None:intergenic	25.0%
!	AGGAAATTAGATAAAAACAG+AGG	-	chr4_3:40908741-40908760	None:intergenic	25.0%
!	AGATCACAAAAATCAATATC+AGG	-	chr4_3:40908883-40908902	None:intergenic	25.0%
!!!	GGTTTTATCTAGTTTTTTGA+TGG	+	chr4_3:40909155-40909174	Msa0641100:CDS	25.0%
!	ACTTAAATCCTAATGAACAA+GGG	-	chr4_3:40909636-40909655	None:intergenic	25.0%
!	TTGTTCATTAGGATTTAAGT+GGG	+	chr4_3:40909636-40909655	Msa0641100:intron	25.0%
!	CACTAATTAGTGAAATGTTA+TGG	+	chr4_3:40909839-40909858	Msa0641100:three_prime_UTR	25.0%
!!!	TGAAATGTTATGGTTTTTTG+TGG	+	chr4_3:40909849-40909868	Msa0641100:three_prime_UTR	25.0%
!	TAAGATAGAAGAATGTTATG+TGG	+	chr4_3:40909932-40909951	Msa0641100:three_prime_UTR	25.0%
!	ATTAGATAAAAACAGAGGTA+GGG	-	chr4_3:40908736-40908755	None:intergenic	25.0%
!	AATTAGATAAAAACAGAGGT+AGG	-	chr4_3:40908737-40908756	None:intergenic	25.0%
!	AGGAAATTAGATAAAAACAG+AGG	-	chr4_3:40908741-40908760	None:intergenic	25.0%
!	AGATCACAAAAATCAATATC+AGG	-	chr4_3:40908883-40908902	None:intergenic	25.0%
!!!	GGTTTTATCTAGTTTTTTGA+TGG	+	chr4_3:40909155-40909174	Msa0641100:CDS	25.0%
!	ACTTAAATCCTAATGAACAA+GGG	-	chr4_3:40909636-40909655	None:intergenic	25.0%
!	TTGTTCATTAGGATTTAAGT+GGG	+	chr4_3:40909636-40909655	Msa0641100:intron	25.0%
!	CACTAATTAGTGAAATGTTA+TGG	+	chr4_3:40909839-40909858	Msa0641100:three_prime_UTR	25.0%
!!!	TGAAATGTTATGGTTTTTTG+TGG	+	chr4_3:40909849-40909868	Msa0641100:three_prime_UTR	25.0%
!	TAAGATAGAAGAATGTTATG+TGG	+	chr4_3:40909932-40909951	Msa0641100:three_prime_UTR	25.0%
!	TTTTGAATCGAAGTTTCCTA+TGG	+	chr4_3:40908617-40908636	Msa0641100:intron	30.0%
!!	ATAAACAACGCACTGATTTA+AGG	-	chr4_3:40908651-40908670	None:intergenic	30.0%
!	TGTTTATTCAAGTTTGCCTT+TGG	+	chr4_3:40908664-40908683	Msa0641100:intron	30.0%
	GATCTCAAATCAATTTCCAA+AGG	-	chr4_3:40908683-40908702	None:intergenic	30.0%
	CAACAGAATAACAACCTAAT+AGG	-	chr4_3:40908761-40908780	None:intergenic	30.0%
	TTATGGCTATGTCAATAATC+TGG	+	chr4_3:40908943-40908962	Msa0641100:intron	30.0%
	TATGGCTATGTCAATAATCT+GGG	+	chr4_3:40908944-40908963	Msa0641100:intron	30.0%
!!	TTGCTTTTGTATTAGGAACT+TGG	+	chr4_3:40908971-40908990	Msa0641100:intron	30.0%
!	TTTTGTATTAGGAACTTGGA+AGG	+	chr4_3:40908975-40908994	Msa0641100:intron	30.0%
	AGCTAAGTCTTCAATCAAAA+TGG	+	chr4_3:40909002-40909021	Msa0641100:exon	30.0%
!!	TTTCATTGGAGGTATTGATT+TGG	+	chr4_3:40909134-40909153	Msa0641100:CDS	30.0%
!!!	AAATGTATGGTTTTGGCTTT+TGG	+	chr4_3:40909207-40909226	Msa0641100:CDS	30.0%
	TAAATGCATCCTTAAGAGAT+TGG	-	chr4_3:40909263-40909282	None:intergenic	30.0%
	AAGGATGCATTTACAACTTA+CGG	+	chr4_3:40909270-40909289	Msa0641100:CDS	30.0%
	CACTTAAATCCTAATGAACA+AGG	-	chr4_3:40909637-40909656	None:intergenic	30.0%
	CTTGTTCATTAGGATTTAAG+TGG	+	chr4_3:40909635-40909654	Msa0641100:intron	30.0%
	AGATTGTCTATCATTTGCAT+AGG	-	chr4_3:40909678-40909697	None:intergenic	30.0%
	TATGCAAATGATAGACAATC+TGG	+	chr4_3:40909677-40909696	Msa0641100:CDS	30.0%
!!!	TGGTTTTTCAGTGGTTTTAT+AGG	+	chr4_3:40909886-40909905	Msa0641100:three_prime_UTR	30.0%
!	GCAGTATTTAGGTATACTTT+TGG	+	chr4_3:40910011-40910030	Msa0641100:three_prime_UTR	30.0%
!	GTATTTAGGTATACTTTTGG+TGG	+	chr4_3:40910014-40910033	Msa0641100:three_prime_UTR	30.0%
!	TTTTGAATCGAAGTTTCCTA+TGG	+	chr4_3:40908617-40908636	Msa0641100:intron	30.0%
!!	ATAAACAACGCACTGATTTA+AGG	-	chr4_3:40908651-40908670	None:intergenic	30.0%
!	TGTTTATTCAAGTTTGCCTT+TGG	+	chr4_3:40908664-40908683	Msa0641100:intron	30.0%
	GATCTCAAATCAATTTCCAA+AGG	-	chr4_3:40908683-40908702	None:intergenic	30.0%
	CAACAGAATAACAACCTAAT+AGG	-	chr4_3:40908761-40908780	None:intergenic	30.0%
	TTATGGCTATGTCAATAATC+TGG	+	chr4_3:40908943-40908962	Msa0641100:intron	30.0%
	TATGGCTATGTCAATAATCT+GGG	+	chr4_3:40908944-40908963	Msa0641100:intron	30.0%
!!	TTGCTTTTGTATTAGGAACT+TGG	+	chr4_3:40908971-40908990	Msa0641100:intron	30.0%
!	TTTTGTATTAGGAACTTGGA+AGG	+	chr4_3:40908975-40908994	Msa0641100:intron	30.0%
	AGCTAAGTCTTCAATCAAAA+TGG	+	chr4_3:40909002-40909021	Msa0641100:exon	30.0%
!!	TTTCATTGGAGGTATTGATT+TGG	+	chr4_3:40909134-40909153	Msa0641100:CDS	30.0%
!!!	AAATGTATGGTTTTGGCTTT+TGG	+	chr4_3:40909207-40909226	Msa0641100:CDS	30.0%
	TAAATGCATCCTTAAGAGAT+TGG	-	chr4_3:40909263-40909282	None:intergenic	30.0%
	AAGGATGCATTTACAACTTA+CGG	+	chr4_3:40909270-40909289	Msa0641100:CDS	30.0%
	CACTTAAATCCTAATGAACA+AGG	-	chr4_3:40909637-40909656	None:intergenic	30.0%
	CTTGTTCATTAGGATTTAAG+TGG	+	chr4_3:40909635-40909654	Msa0641100:intron	30.0%
	AGATTGTCTATCATTTGCAT+AGG	-	chr4_3:40909678-40909697	None:intergenic	30.0%
	TATGCAAATGATAGACAATC+TGG	+	chr4_3:40909677-40909696	Msa0641100:CDS	30.0%
!!!	TGGTTTTTCAGTGGTTTTAT+AGG	+	chr4_3:40909886-40909905	Msa0641100:three_prime_UTR	30.0%
!	GCAGTATTTAGGTATACTTT+TGG	+	chr4_3:40910011-40910030	Msa0641100:three_prime_UTR	30.0%
!	GTATTTAGGTATACTTTTGG+TGG	+	chr4_3:40910014-40910033	Msa0641100:three_prime_UTR	30.0%
!!!	GGGTTTGTTGCTTTTGTATT+AGG	+	chr4_3:40908964-40908983	Msa0641100:intron	35.0%
	ATGGCTTTCTGTAACAAGAT+TGG	+	chr4_3:40909021-40909040	Msa0641100:CDS	35.0%
	TAGTTAAGCATGGATGAAAC+AGG	-	chr4_3:40909087-40909106	None:intergenic	35.0%
!	TCTTCAAGCAAGCTTTTCAT+TGG	+	chr4_3:40909120-40909139	Msa0641100:CDS	35.0%
!	TAAGAGATTGGTCATCAACA+TGG	-	chr4_3:40909251-40909270	None:intergenic	35.0%
!!	TGTTGATGACCAATCTCTTA+AGG	+	chr4_3:40909251-40909270	Msa0641100:CDS	35.0%
!!	GCATCTACGTTGTTTGATTT+TGG	+	chr4_3:40909402-40909421	Msa0641100:intron	35.0%
	ATAGAGATACTGGAAGATCA+AGG	+	chr4_3:40909477-40909496	Msa0641100:CDS	35.0%
	TAGAGATACTGGAAGATCAA+GGG	+	chr4_3:40909478-40909497	Msa0641100:CDS	35.0%
	TAATTAGTGACTGACCACTT+GGG	-	chr4_3:40909828-40909847	None:intergenic	35.0%
!!!	TTATGGTTTTTTGTGGTCGT+TGG	+	chr4_3:40909856-40909875	Msa0641100:three_prime_UTR	35.0%
!!	ATCATTTGATGATGGTGCAT+TGG	+	chr4_3:40910100-40910119	Msa0641100:three_prime_UTR	35.0%
!!!	GGGTTTGTTGCTTTTGTATT+AGG	+	chr4_3:40908964-40908983	Msa0641100:intron	35.0%
	ATGGCTTTCTGTAACAAGAT+TGG	+	chr4_3:40909021-40909040	Msa0641100:CDS	35.0%
	TAGTTAAGCATGGATGAAAC+AGG	-	chr4_3:40909087-40909106	None:intergenic	35.0%
!	TCTTCAAGCAAGCTTTTCAT+TGG	+	chr4_3:40909120-40909139	Msa0641100:CDS	35.0%
!	TAAGAGATTGGTCATCAACA+TGG	-	chr4_3:40909251-40909270	None:intergenic	35.0%
!!	TGTTGATGACCAATCTCTTA+AGG	+	chr4_3:40909251-40909270	Msa0641100:CDS	35.0%
!!	GCATCTACGTTGTTTGATTT+TGG	+	chr4_3:40909402-40909421	Msa0641100:intron	35.0%
	ATAGAGATACTGGAAGATCA+AGG	+	chr4_3:40909477-40909496	Msa0641100:CDS	35.0%
	TAGAGATACTGGAAGATCAA+GGG	+	chr4_3:40909478-40909497	Msa0641100:CDS	35.0%
	TAATTAGTGACTGACCACTT+GGG	-	chr4_3:40909828-40909847	None:intergenic	35.0%
!!!	TTATGGTTTTTTGTGGTCGT+TGG	+	chr4_3:40909856-40909875	Msa0641100:three_prime_UTR	35.0%
!!	ATCATTTGATGATGGTGCAT+TGG	+	chr4_3:40910100-40910119	Msa0641100:three_prime_UTR	35.0%
	TGAATCGAAGTTTCCTATGG+AGG	+	chr4_3:40908620-40908639	Msa0641100:intron	40.0%
!	ATTTAAGGCGTTTCCTCCAT+AGG	-	chr4_3:40908636-40908655	None:intergenic	40.0%
!	AAAGCTTGCTTGAAGACATG+TGG	-	chr4_3:40909116-40909135	None:intergenic	40.0%
!	TCAAGCAAGCTTTTCATTGG+AGG	+	chr4_3:40909123-40909142	Msa0641100:CDS	40.0%
!!!	GGTTTTGGCTTTTGGTATCA+CGG	+	chr4_3:40909215-40909234	Msa0641100:CDS	40.0%
!!!	GTTTTGGCTTTTGGTATCAC+GGG	+	chr4_3:40909216-40909235	Msa0641100:CDS	40.0%
	GGTCATCAACATGGTAAGAA+AGG	-	chr4_3:40909242-40909261	None:intergenic	40.0%
	TGCATTTACAACTTACGGAG+AGG	+	chr4_3:40909275-40909294	Msa0641100:CDS	40.0%
	GTCATCACTGATAGAGATAC+TGG	+	chr4_3:40909467-40909486	Msa0641100:CDS	40.0%
	AGAGATACTGGAAGATCAAG+GGG	+	chr4_3:40909479-40909498	Msa0641100:CDS	40.0%
	TAGACACAAGAACTCAACAC+AGG	-	chr4_3:40909782-40909801	None:intergenic	40.0%
	CTAATTAGTGACTGACCACT+TGG	-	chr4_3:40909829-40909848	None:intergenic	40.0%
!!!	GGCACATTTTGGTTTTTCAG+TGG	+	chr4_3:40909877-40909896	Msa0641100:three_prime_UTR	40.0%
	GCACGAAAACTGCAGTATTT+AGG	+	chr4_3:40910000-40910019	Msa0641100:three_prime_UTR	40.0%
!!	CGGCAAGATAATGGAAACAT+TGG	-	chr4_3:40910049-40910068	None:intergenic	40.0%
	TGAATCGAAGTTTCCTATGG+AGG	+	chr4_3:40908620-40908639	Msa0641100:intron	40.0%
!	ATTTAAGGCGTTTCCTCCAT+AGG	-	chr4_3:40908636-40908655	None:intergenic	40.0%
!	AAAGCTTGCTTGAAGACATG+TGG	-	chr4_3:40909116-40909135	None:intergenic	40.0%
!	TCAAGCAAGCTTTTCATTGG+AGG	+	chr4_3:40909123-40909142	Msa0641100:CDS	40.0%
!!!	GGTTTTGGCTTTTGGTATCA+CGG	+	chr4_3:40909215-40909234	Msa0641100:CDS	40.0%
!!!	GTTTTGGCTTTTGGTATCAC+GGG	+	chr4_3:40909216-40909235	Msa0641100:CDS	40.0%
	GGTCATCAACATGGTAAGAA+AGG	-	chr4_3:40909242-40909261	None:intergenic	40.0%
	TGCATTTACAACTTACGGAG+AGG	+	chr4_3:40909275-40909294	Msa0641100:CDS	40.0%
	GTCATCACTGATAGAGATAC+TGG	+	chr4_3:40909467-40909486	Msa0641100:CDS	40.0%
	AGAGATACTGGAAGATCAAG+GGG	+	chr4_3:40909479-40909498	Msa0641100:CDS	40.0%
	TAGACACAAGAACTCAACAC+AGG	-	chr4_3:40909782-40909801	None:intergenic	40.0%
	CTAATTAGTGACTGACCACT+TGG	-	chr4_3:40909829-40909848	None:intergenic	40.0%
!!!	GGCACATTTTGGTTTTTCAG+TGG	+	chr4_3:40909877-40909896	Msa0641100:three_prime_UTR	40.0%
	GCACGAAAACTGCAGTATTT+AGG	+	chr4_3:40910000-40910019	Msa0641100:three_prime_UTR	40.0%
!!	CGGCAAGATAATGGAAACAT+TGG	-	chr4_3:40910049-40910068	None:intergenic	40.0%
	GGTTGTAACCCTAGTAGCAA+TGG	-	chr4_3:40908510-40908529	None:intergenic	45.0%
	GTCTATGAAGATTCTGTGCG+TGG	-	chr4_3:40908531-40908550	None:intergenic	45.0%
	ACAAGATTGGAAGCCTCTTG+AGG	+	chr4_3:40909034-40909053	Msa0641100:CDS	45.0%
	AACTTACGGAGAGGTGATTG+AGG	+	chr4_3:40909284-40909303	Msa0641100:CDS	45.0%
	ACTTACGGAGAGGTGATTGA+GGG	+	chr4_3:40909285-40909304	Msa0641100:CDS	45.0%
	ACTGGAAGATCAAGGGGATT+TGG	+	chr4_3:40909485-40909504	Msa0641100:CDS	45.0%
!	TGCAACTTCAGCACTTGCTA+TGG	+	chr4_3:40909535-40909554	Msa0641100:CDS	45.0%
!!	ACTTCAGCACTTGCTATGGA+TGG	+	chr4_3:40909539-40909558	Msa0641100:CDS	45.0%
	CTGACATGCCCTTGTTCATT+AGG	+	chr4_3:40909625-40909644	Msa0641100:intron	45.0%
	TGAAGTTGTTATGGCCCAAG+TGG	+	chr4_3:40909811-40909830	Msa0641100:three_prime_UTR	45.0%
!	TTGTGGTCGTTGGCACATTT+TGG	+	chr4_3:40909866-40909885	Msa0641100:three_prime_UTR	45.0%
	CTTCACACACGGCAAGATAA+TGG	-	chr4_3:40910058-40910077	None:intergenic	45.0%
	CAGGTAGTTCTCTTCACACA+CGG	-	chr4_3:40910069-40910088	None:intergenic	45.0%
	GCTTGCGCATCATTTGATGA+TGG	+	chr4_3:40910092-40910111	Msa0641100:intron	45.0%
	GGTTGTAACCCTAGTAGCAA+TGG	-	chr4_3:40908510-40908529	None:intergenic	45.0%
	GTCTATGAAGATTCTGTGCG+TGG	-	chr4_3:40908531-40908550	None:intergenic	45.0%
	ACAAGATTGGAAGCCTCTTG+AGG	+	chr4_3:40909034-40909053	Msa0641100:CDS	45.0%
	AACTTACGGAGAGGTGATTG+AGG	+	chr4_3:40909284-40909303	Msa0641100:CDS	45.0%
	ACTTACGGAGAGGTGATTGA+GGG	+	chr4_3:40909285-40909304	Msa0641100:CDS	45.0%
	ACTGGAAGATCAAGGGGATT+TGG	+	chr4_3:40909485-40909504	Msa0641100:CDS	45.0%
!	TGCAACTTCAGCACTTGCTA+TGG	+	chr4_3:40909535-40909554	Msa0641100:CDS	45.0%
!!	ACTTCAGCACTTGCTATGGA+TGG	+	chr4_3:40909539-40909558	Msa0641100:CDS	45.0%
	CTGACATGCCCTTGTTCATT+AGG	+	chr4_3:40909625-40909644	Msa0641100:intron	45.0%
	TGAAGTTGTTATGGCCCAAG+TGG	+	chr4_3:40909811-40909830	Msa0641100:three_prime_UTR	45.0%
!	TTGTGGTCGTTGGCACATTT+TGG	+	chr4_3:40909866-40909885	Msa0641100:three_prime_UTR	45.0%
	CTTCACACACGGCAAGATAA+TGG	-	chr4_3:40910058-40910077	None:intergenic	45.0%
	CAGGTAGTTCTCTTCACACA+CGG	-	chr4_3:40910069-40910088	None:intergenic	45.0%
	GCTTGCGCATCATTTGATGA+TGG	+	chr4_3:40910092-40910111	Msa0641100:intron	45.0%
!!!	ATGTATTTTTTTTATAATTA+TGG	+	chr4_3:40908926-40908945	Msa0641100:intron	5.0%
!!!	ATGTATTTTTTTTATAATTA+TGG	+	chr4_3:40908926-40908945	Msa0641100:intron	5.0%
	GAGGTAGGGTTGAGCAAACT+TGG	-	chr4_3:40908722-40908741	None:intergenic	50.0%
	ATTGGAAGCCTCTTGAGGCA+AGG	+	chr4_3:40909039-40909058	Msa0641100:CDS	50.0%
	AACAGGAGCTTGAGTGCTCT+GGG	-	chr4_3:40909070-40909089	None:intergenic	50.0%
	AAACAGGAGCTTGAGTGCTC+TGG	-	chr4_3:40909071-40909090	None:intergenic	50.0%
	GTGGCGCAAGTAGTTAAGCA+TGG	-	chr4_3:40909097-40909116	None:intergenic	50.0%
!!	AGCACTTGCTATGGATGGAC+AGG	+	chr4_3:40909544-40909563	Msa0641100:CDS	50.0%
	CAAATGATGCGCAAGCTGAC+AGG	-	chr4_3:40910088-40910107	None:intergenic	50.0%
	GAGGTAGGGTTGAGCAAACT+TGG	-	chr4_3:40908722-40908741	None:intergenic	50.0%
	ATTGGAAGCCTCTTGAGGCA+AGG	+	chr4_3:40909039-40909058	Msa0641100:CDS	50.0%
	AACAGGAGCTTGAGTGCTCT+GGG	-	chr4_3:40909070-40909089	None:intergenic	50.0%
	AAACAGGAGCTTGAGTGCTC+TGG	-	chr4_3:40909071-40909090	None:intergenic	50.0%
	GTGGCGCAAGTAGTTAAGCA+TGG	-	chr4_3:40909097-40909116	None:intergenic	50.0%
!!	AGCACTTGCTATGGATGGAC+AGG	+	chr4_3:40909544-40909563	Msa0641100:CDS	50.0%
	CAAATGATGCGCAAGCTGAC+AGG	-	chr4_3:40910088-40910107	None:intergenic	50.0%
	AGACAATCTGGACCTCGTCC+TGG	+	chr4_3:40909689-40909708	Msa0641100:CDS	55.0%
	AGACAATCTGGACCTCGTCC+TGG	+	chr4_3:40909689-40909708	Msa0641100:CDS	55.0%
	GGGTAGCACCTTGCCTCAAG+AGG	-	chr4_3:40909050-40909069	None:intergenic	60.0%
	CAATCTGGACCTCGTCCTGG+AGG	+	chr4_3:40909692-40909711	Msa0641100:CDS	60.0%
	TATCCACCACCTCCAGGACG+AGG	-	chr4_3:40909704-40909723	None:intergenic	60.0%
!!	CGTCCTGGAGGTGGTGGATA+TGG	+	chr4_3:40909704-40909723	Msa0641100:CDS	60.0%
	CCACCATATCCACCACCTCC+AGG	-	chr4_3:40909710-40909729	None:intergenic	60.0%
!!	CCTGGAGGTGGTGGATATGG+TGG	+	chr4_3:40909707-40909726	Msa0641100:CDS	60.0%
!!	GGAGGTGGTGGATATGGTGG+CGG	+	chr4_3:40909710-40909729	Msa0641100:CDS	60.0%
	GGGTAGCACCTTGCCTCAAG+AGG	-	chr4_3:40909050-40909069	None:intergenic	60.0%
	CAATCTGGACCTCGTCCTGG+AGG	+	chr4_3:40909692-40909711	Msa0641100:CDS	60.0%
	TATCCACCACCTCCAGGACG+AGG	-	chr4_3:40909704-40909723	None:intergenic	60.0%
!!	CGTCCTGGAGGTGGTGGATA+TGG	+	chr4_3:40909704-40909723	Msa0641100:CDS	60.0%
	CCACCATATCCACCACCTCC+AGG	-	chr4_3:40909710-40909729	None:intergenic	60.0%
!!	CCTGGAGGTGGTGGATATGG+TGG	+	chr4_3:40909707-40909726	Msa0641100:CDS	60.0%
!!	GGAGGTGGTGGATATGGTGG+CGG	+	chr4_3:40909710-40909729	Msa0641100:CDS	60.0%
	TCTGGACCTCGTCCTGGAGG+TGG	+	chr4_3:40909695-40909714	Msa0641100:CDS	65.0%
!!	GGTGGTGGATATGGTGGCGG+CGG	+	chr4_3:40909713-40909732	Msa0641100:CDS	65.0%
	TCTGGACCTCGTCCTGGAGG+TGG	+	chr4_3:40909695-40909714	Msa0641100:CDS	65.0%
!!	GGTGGTGGATATGGTGGCGG+CGG	+	chr4_3:40909713-40909732	Msa0641100:CDS	65.0%
	GGACCTCGTCCTGGAGGTGG+TGG	+	chr4_3:40909698-40909717	Msa0641100:CDS	70.0%
!!	GGTGGATATGGTGGCGGCGG+CGG	+	chr4_3:40909716-40909735	Msa0641100:CDS	70.0%
	GGACCTCGTCCTGGAGGTGG+TGG	+	chr4_3:40909698-40909717	Msa0641100:CDS	70.0%
!!	GGTGGATATGGTGGCGGCGG+CGG	+	chr4_3:40909716-40909735	Msa0641100:CDS	70.0%
!!	GGATATGGTGGCGGCGGCGG+TGG	+	chr4_3:40909719-40909738	Msa0641100:CDS	75.0%
!!	ATGGTGGCGGCGGCGGTGGT+TGG	+	chr4_3:40909723-40909742	Msa0641100:CDS	75.0%
!!	GGATATGGTGGCGGCGGCGG+TGG	+	chr4_3:40909719-40909738	Msa0641100:CDS	75.0%
!!	ATGGTGGCGGCGGCGGTGGT+TGG	+	chr4_3:40909723-40909742	Msa0641100:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_3	gene	40908500	40910142	40908500	ID=Msa0641100;Name=Msa0641100
chr4_3	mRNA	40908500	40910142	40908500	ID=Msa0641100-mRNA-1;Parent=Msa0641100;Name=Msa0641100-mRNA-1;_AED=0.08;_eAED=0.08;_QI=91\|1\|1\|1\|0.5\|0.2\|5\|373\|163
chr4_3	exon	40908500	40908555	40908500	ID=Msa0641100-mRNA-1:exon:9200;Parent=Msa0641100-mRNA-1
chr4_3	exon	40908986	40909306	40908986	ID=Msa0641100-mRNA-1:exon:9201;Parent=Msa0641100-mRNA-1
chr4_3	exon	40909462	40909565	40909462	ID=Msa0641100-mRNA-1:exon:9202;Parent=Msa0641100-mRNA-1
chr4_3	exon	40909647	40910071	40909647	ID=Msa0641100-mRNA-1:exon:9203;Parent=Msa0641100-mRNA-1
chr4_3	exon	40910093	40910142	40910093	ID=Msa0641100-mRNA-1:exon:9204;Parent=Msa0641100-mRNA-1
chr4_3	five_prime_UTR	40908500	40908555	40908500	ID=Msa0641100-mRNA-1:five_prime_utr;Parent=Msa0641100-mRNA-1
chr4_3	five_prime_UTR	40908986	40909020	40908986	ID=Msa0641100-mRNA-1:five_prime_utr;Parent=Msa0641100-mRNA-1
chr4_3	CDS	40909021	40909306	40909021	ID=Msa0641100-mRNA-1:cds;Parent=Msa0641100-mRNA-1
chr4_3	CDS	40909462	40909565	40909462	ID=Msa0641100-mRNA-1:cds;Parent=Msa0641100-mRNA-1
chr4_3	CDS	40909647	40909748	40909647	ID=Msa0641100-mRNA-1:cds;Parent=Msa0641100-mRNA-1
chr4_3	three_prime_UTR	40909749	40910071	40909749	ID=Msa0641100-mRNA-1:three_prime_utr;Parent=Msa0641100-mRNA-1
chr4_3	three_prime_UTR	40910093	40910142	40910093	ID=Msa0641100-mRNA-1:three_prime_utr;Parent=Msa0641100-mRNA-1

Gene Sequence

>Msa0641100

ATGGCTTTCTGTAACAAGATTGGAAGCCTCTTGAGGCAAGGTGCTACCCAGAGCACTCAAGCTCCTGTTTCATCCATGCTTAACTACTTGCGCCACATGTCTTCAAGCAAGCTTTTCATTGGAGGTATTGATTTGGTTTTATCTAGTTTTTTGATGGTGATTAGTATTATTATTATGTCACTAATAAAATGTATGGTTTTGGCTTTTGGTATCACGGGCCTTTCTTACCATGTTGATGACCAATCTCTTAAGGATGCATTTACAACTTACGGAGAGGTGATTGAGGCAAGAGTCATCACTGATAGAGATACTGGAAGATCAAGGGGATTTGGATTTGTCAACTTCATCAGTGAAGAGTCTGCAACTTCAGCACTTGCTATGGATGGACAGGATTTAAGTGGGCGAAACATTCGTGTGTCCTATGCAAATGATAGACAATCTGGACCTCGTCCTGGAGGTGGTGGATATGGTGGCGGCGGCGGTGGTTGGTGA

Protein sequence

>Msa0641100

MAFCNKIGSLLRQGATQSTQAPVSSMLNYLRHMSSSKLFIGGIDLVLSSFLMVISIIIMSLIKCMVLAFGITGLSYHVDDQSLKDAFTTYGEVIEARVITDRDTGRSRGFGFVNFISEESATSALAMDGQDLSGRNIRVSYANDRQSGPRPGGGGYGGGGGGW*