AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1148000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1148000 MtrunA17_Chr7g0233311 91.459 562 47 1 292 852 53 614 0.0 1044
Msa1148000 MtrunA17_Chr7g0233311 93.333 30 2 0 1 30 1 30 1.60e-11 68.2
Msa1148000 MtrunA17_Chr7g0233301 82.918 562 64 2 292 852 53 583 0.0 926
Msa1148000 MtrunA17_Chr2g0298851 71.701 576 160 3 279 852 39 613 0.0 838
Msa1148000 MtrunA17_Chr4g0040931 72.352 557 154 0 292 848 53 609 0.0 836
Msa1148000 MtrunA17_Chr2g0293581 69.192 594 180 3 262 852 22 615 0.0 828
Msa1148000 MtrunA17_Chr2g0298861 69.847 587 164 3 279 852 39 625 0.0 824
Msa1148000 MtrunA17_Chr7g0221661 70.609 575 167 2 279 852 39 612 0.0 823
Msa1148000 MtrunA17_Chr5g0427901 69.966 586 163 3 279 852 39 623 0.0 817
Msa1148000 MtrunA17_Chr7g0223721 70.945 561 163 0 292 852 53 613 0.0 815
Msa1148000 MtrunA17_Chr7g0223851 70.996 562 161 2 292 852 62 622 0.0 805
Msa1148000 MtrunA17_Chr7g0223801 68.522 575 177 4 279 852 39 610 0.0 802
Msa1148000 MtrunA17_Chr7g0225671 71.530 562 157 3 292 852 60 619 0.0 802
Msa1148000 MtrunA17_Chr2g0287631 68.182 594 186 3 262 852 21 614 0.0 791
Msa1148000 MtrunA17_Chr7g0217971 68.085 564 153 4 279 841 39 576 0.0 772
Msa1148000 MtrunA17_Chr7g0223821 66.949 590 187 5 279 862 39 626 0.0 763
Msa1148000 MtrunA17_Chr7g0223821 45.455 88 46 1 772 857 620 707 1.33e-12 71.6
Msa1148000 MtrunA17_Chr7g0223181 64.407 590 205 5 262 848 21 608 0.0 754
Msa1148000 MtrunA17_Chr8g0390821 61.760 625 173 5 279 852 41 650 0.0 751
Msa1148000 MtrunA17_Chr4g0012541 69.361 532 161 2 322 852 74 604 0.0 749
Msa1148000 MtrunA17_Chr4g0031321 63.220 590 212 5 262 848 21 608 0.0 748
Msa1148000 MtrunA17_Chr7g0223291 63.729 590 209 5 262 848 21 608 0.0 748
Msa1148000 MtrunA17_Chr4g0031301 63.220 590 212 5 262 848 21 608 0.0 746
Msa1148000 MtrunA17_Chr7g0223711 62.162 592 219 5 262 850 21 610 0.0 746
Msa1148000 MtrunA17_Chr7g0262821 63.051 590 213 5 262 848 21 608 0.0 744
Msa1148000 MtrunA17_Chr7g0223831 65.799 576 166 4 279 852 39 585 0.0 736
Msa1148000 MtrunA17_Chr7g0223751 64.222 559 198 2 292 850 53 609 0.0 736
Msa1148000 MtrunA17_Chr7g0223781 63.255 596 208 5 262 852 21 610 0.0 735
Msa1148000 MtrunA17_Chr8g0350731 62.203 590 219 4 262 849 49 636 0.0 734
Msa1148000 MtrunA17_Chr7g0223621 61.929 591 221 4 262 850 21 609 0.0 734
Msa1148000 MtrunA17_Chr2g0296391 70.784 510 146 3 262 768 21 530 0.0 730
Msa1148000 MtrunA17_Chr7g0223031 62.304 573 213 3 279 850 39 609 0.0 729
Msa1148000 MtrunA17_Chr4g0073741 61.356 590 223 5 262 848 20 607 0.0 722
Msa1148000 MtrunA17_Chr7g0223741 65.217 552 189 3 279 828 39 589 0.0 720
Msa1148000 MtrunA17_Chr7g0215261 61.765 612 189 6 244 852 11 580 0.0 720
Msa1148000 MtrunA17_Chr7g0228281 65.836 562 145 5 292 852 114 629 0.0 717
Msa1148000 MtrunA17_Chr7g0223731 60.908 573 221 3 279 850 39 609 0.0 712
Msa1148000 MtrunA17_Chr7g0223541 62.749 553 200 4 313 864 31 578 0.0 705
Msa1148000 MtrunA17_Chr7g0223701 59.599 599 231 6 262 850 21 618 0.0 693
Msa1148000 MtrunA17_Chr7g0248151 60.235 596 226 6 262 850 21 612 0.0 687
Msa1148000 MtrunA17_Chr7g0248131 60.485 577 222 6 279 850 39 614 0.0 683
Msa1148000 MtrunA17_Chr7g0223631 60.135 592 216 8 262 850 21 595 0.0 677
Msa1148000 MtrunA17_Chr7g0223681 63.148 521 190 2 330 850 2 520 0.0 671
Msa1148000 MtrunA17_Chr2g0293601 65.731 499 134 4 262 757 21 485 0.0 645
Msa1148000 MtrunA17_Chr2g0331381 64.244 509 119 4 279 786 36 482 0.0 637
Msa1148000 MtrunA17_Chr6g0462681 56.137 554 239 4 279 829 37 589 0.0 606
Msa1148000 MtrunA17_Chr6g0462601 54.766 577 256 5 279 852 37 611 0.0 602
Msa1148000 MtrunA17_Chr2g0284681 58.965 541 213 5 279 810 36 576 0.0 599
Msa1148000 MtrunA17_Chr6g0462711 56.410 546 230 4 291 829 52 596 0.0 597
Msa1148000 MtrunA17_Chr1g0166551 56.762 562 130 5 292 852 49 498 0.0 594
Msa1148000 MtrunA17_Chr6g0462641 55.437 561 239 6 278 829 36 594 0.0 587
Msa1148000 MtrunA17_Chr8g0388761 54.797 542 237 6 292 829 80 617 0.0 585
Msa1148000 MtrunA17_Chr8g0388671 54.797 542 237 6 292 829 80 617 0.0 580
Msa1148000 MtrunA17_Chr6g0462611 55.985 518 225 3 313 829 22 537 0.0 570
Msa1148000 MtrunA17_Chr6g0462771 54.312 545 241 4 292 829 51 594 0.0 565
Msa1148000 MtrunA17_Chr2g0293561 78.274 336 72 1 279 613 39 374 0.0 547
Msa1148000 MtrunA17_Chr2g0299821 52.190 525 178 5 262 776 21 482 1.68e-173 510
Msa1148000 MtrunA17_Chr2g0293271 59.559 408 95 3 289 696 72 409 2.42e-155 461
Msa1148000 MtrunA17_Chr2g0279901 46.704 531 257 9 279 800 84 597 3.55e-149 455
Msa1148000 MtrunA17_Chr2g0299921 64.267 375 130 3 262 635 1041 1412 3.79e-148 479
Msa1148000 MtrunA17_Chr2g0299921 64.228 369 127 4 262 628 1425 1790 3.77e-138 451
Msa1148000 MtrunA17_Chr7g0245531 70.684 307 89 1 544 850 2 307 7.17e-147 435
Msa1148000 MtrunA17_Chr2g0299791 65.341 352 119 2 279 629 1070 1419 9.20e-146 466
Msa1148000 MtrunA17_Chr6g0462861 45.222 586 290 11 280 852 35 602 1.95e-145 444
Msa1148000 MtrunA17_Chr2g0299851 62.772 368 133 3 262 628 1050 1414 2.33e-144 462
Msa1148000 MtrunA17_Chr4g0049501 45.574 531 260 11 279 798 81 593 2.24e-143 439
Msa1148000 MtrunA17_Chr2g0277021 46.304 514 258 8 292 800 114 614 8.44e-140 431
Msa1148000 MtrunA17_Chr7g0223761 57.724 369 113 2 483 850 6 332 5.43e-138 414
Msa1148000 MtrunA17_Chr2g0299881 60.630 381 140 3 262 634 1050 1428 5.52e-137 443
Msa1148000 MtrunA17_Chr2g0299881 62.121 66 21 1 424 489 1414 1475 4.53e-16 83.6
Msa1148000 MtrunA17_Chr1g0152001 63.545 299 107 2 554 852 1 297 2.09e-125 380
Msa1148000 MtrunA17_Chr1g0151991 67.014 288 87 2 244 530 11 291 1.68e-124 377
Msa1148000 MtrunA17_Chr7g0245521 76.596 235 54 1 279 512 39 273 2.25e-120 365
Msa1148000 MtrunA17_Chr1g0188611 63.356 292 100 1 561 852 1 285 1.10e-110 341
Msa1148000 MtrunA17_Chr1g0188601 81.152 191 36 0 331 521 1 191 3.35e-106 325
Msa1148000 MtrunA17_Chr7g0223671 75.532 188 46 0 313 500 8 195 1.05e-100 311
Msa1148000 MtrunA17_Chr6g0462631 49.697 330 117 5 330 655 13 297 1.50e-94 299
Msa1148000 MtrunA17_Chr6g0462751 48.378 339 115 4 313 648 19 300 2.93e-92 293
Msa1148000 MtrunA17_Chr7g0223771 75.484 155 38 0 332 486 1 155 2.72e-79 253
Msa1148000 MtrunA17_Chr7g0245541 62.437 197 73 1 656 852 1 196 2.73e-75 244
Msa1148000 MtrunA17_Chr5g0394391 36.092 435 265 7 309 733 90 521 5.53e-75 256
Msa1148000 MtrunA17_Chr7g0223861 81.679 131 24 0 317 447 4 134 1.39e-69 226
Msa1148000 MtrunA17_Chr4g0046881 75.177 141 32 1 374 514 14 151 1.54e-67 221
Msa1148000 MtrunA17_Chr6g0462791 61.932 176 66 1 347 522 1 175 2.30e-67 221
Msa1148000 MtrunA17_Chr4g0004331 35.772 369 230 5 286 650 39 404 1.08e-62 227
Msa1148000 MtrunA17_Chr2g0331901 33.835 399 247 6 286 670 39 434 6.46e-62 225
Msa1148000 MtrunA17_Chr5g0444001 33.842 393 250 5 286 671 39 428 1.86e-58 209
Msa1148000 MtrunA17_Chr3g0134381 69.540 174 29 3 30 181 41 212 2.92e-57 196
Msa1148000 MtrunA17_Chr3g0098761 33.854 384 248 5 286 667 39 418 6.89e-57 209
Msa1148000 MtrunA17_Chr5g0394221 39.519 291 160 6 537 820 68 349 1.15e-56 199
Msa1148000 MtrunA17_Chr4g0064621 34.934 458 262 13 308 742 206 650 9.75e-52 193
Msa1148000 MtrunA17_Chr6g0462701 51.111 180 64 1 330 509 13 168 2.09e-50 174
Msa1148000 MtrunA17_Chr4g0046871 82.000 100 18 0 575 674 6 105 1.27e-48 167
Msa1148000 MtrunA17_Chr6g0481391 73.832 107 28 0 292 398 25 131 6.59e-48 166
Msa1148000 MtrunA17_Chr3g0120101 28.392 479 304 11 292 737 72 544 2.19e-47 182
Msa1148000 MtrunA17_Chr5g0442171 34.451 328 196 7 409 726 1 319 2.84e-45 166
Msa1148000 MtrunA17_Chr4g0060241 28.989 445 283 12 308 735 78 506 1.79e-43 166
Msa1148000 MtrunA17_Chr6g0462691 54.930 142 63 1 561 701 1 142 2.55e-41 149
Msa1148000 MtrunA17_Chr5g0394231 35.683 227 95 4 313 538 5 181 2.32e-36 135
Msa1148000 MtrunA17_Chr7g0223871 50.400 125 62 0 730 854 7 131 2.91e-32 122
Msa1148000 MtrunA17_Chr6g0481381 49.242 132 65 1 719 848 38 169 1.08e-31 122
Msa1148000 MtrunA17_Chr6g0481381 56.436 101 38 1 415 509 1 101 9.90e-30 116
Msa1148000 MtrunA17_Chr7g0223791 45.985 137 65 2 674 810 52 179 2.39e-31 121
Msa1148000 MtrunA17_Chr7g0223791 60.638 94 29 3 291 384 14 99 1.63e-26 107
Msa1148000 MtrunA17_Chr7g0223881 62.651 83 30 1 520 602 2 83 3.85e-25 99.8
Msa1148000 MtrunA17_Chr7g0221651 46.429 84 45 0 454 537 1 84 1.08e-19 84.7
Msa1148000 MtrunA17_Chr4g0064651 41.304 92 53 1 636 726 29 120 1.00e-17 80.1
Msa1148000 MtrunA17_Chr2g0284661 53.012 83 38 1 607 688 61 143 9.08e-17 78.2
Msa1148000 MtrunA17_Chr6g0462801 60.606 66 21 1 561 621 1 66 2.02e-16 74.7
Msa1148000 MtrunA17_Chr2g0299891 74.419 43 11 0 554 596 1 43 6.80e-15 70.5
Msa1148000 MtrunA17_Chr7g0223661 50.000 70 35 0 600 669 4 73 4.68e-13 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1148000 AT3G12580.1 63.390 590 211 5 262 848 21 608 0.0 751
Msa1148000 AT5G02500.1 62.542 590 216 5 262 848 21 608 0.0 741
Msa1148000 AT5G02490.1 62.034 590 219 5 262 848 21 608 0.0 731
Msa1148000 AT3G09440.1 61.525 590 222 5 262 848 21 608 0.0 726
Msa1148000 AT3G09440.4 61.525 590 222 5 262 848 21 608 0.0 726
Msa1148000 AT3G09440.2 61.525 590 222 5 262 848 21 608 0.0 726
Msa1148000 AT3G09440.3 61.525 590 222 5 262 848 21 608 0.0 726
Msa1148000 AT1G56410.1 62.458 594 216 6 262 852 21 610 0.0 726
Msa1148000 AT1G16030.1 60.825 582 221 5 279 857 36 613 0.0 715
Msa1148000 AT5G28540.1 52.070 628 278 11 238 848 13 634 0.0 605
Msa1148000 AT5G42020.1 52.070 628 278 11 238 848 13 634 0.0 601
Msa1148000 AT5G42020.3 55.166 571 246 8 283 848 74 639 0.0 600
Msa1148000 AT1G09080.1 53.528 581 253 8 283 851 84 659 0.0 569
Msa1148000 AT1G09080.2 53.528 581 253 8 283 851 74 649 0.0 569
Msa1148000 AT5G02500.2 70.732 369 106 2 262 629 21 388 0.0 536
Msa1148000 AT5G42020.2 47.528 627 253 12 238 848 13 579 1.74e-175 521
Msa1148000 AT4G24280.1 45.607 535 271 9 292 821 123 642 2.31e-142 439
Msa1148000 AT5G09590.1 43.367 588 295 13 279 857 87 645 6.73e-140 431
Msa1148000 AT4G37910.1 46.212 528 259 9 292 810 97 608 6.45e-139 429
Msa1148000 AT4G37910.2 46.212 528 259 9 292 810 97 608 6.45e-139 429
Msa1148000 AT5G49910.1 46.304 514 258 8 292 800 123 623 1.50e-137 426
Msa1148000 AT2G32120.1 33.705 448 269 9 311 746 93 524 7.16e-67 233
Msa1148000 AT2G32120.2 33.705 448 269 9 311 746 93 524 7.16e-67 233
Msa1148000 AT1G79920.3 33.333 444 259 9 286 695 39 479 3.78e-63 227
Msa1148000 AT1G79920.2 33.333 444 259 9 286 695 39 479 3.78e-63 227
Msa1148000 AT1G79920.4 33.333 444 259 9 286 695 39 479 3.78e-63 227
Msa1148000 AT1G79920.1 33.333 444 259 9 286 695 39 479 5.37e-63 226
Msa1148000 AT1G79930.2 33.108 444 260 9 286 695 39 479 6.63e-63 227
Msa1148000 AT1G79930.1 33.108 444 260 9 286 695 39 479 3.90e-62 226
Msa1148000 AT1G11660.2 34.595 370 236 4 292 658 8 374 1.58e-58 214
Msa1148000 AT1G11660.4 34.595 370 236 4 292 658 45 411 2.82e-58 213
Msa1148000 AT1G11660.3 34.595 370 236 4 292 658 45 411 2.82e-58 213
Msa1148000 AT1G11660.1 34.595 370 236 4 292 658 45 411 2.82e-58 213
Msa1148000 AT4G16660.2 27.191 445 289 7 292 710 96 531 2.64e-44 173
Msa1148000 AT4G16660.1 27.952 415 263 7 292 679 72 477 4.96e-44 172

Find 224 sgRNAs with CRISPR-Local

Find 451 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGTTCTTTCTTCCTTTC+AGG 0.035216 7_4:+27765736 Msa1148000:CDS
CTCAACCTCCTTAAGGCTTT+TGG 0.115288 7_4:-27765142 None:intergenic
AGGGAGGATGTGTTGGTTTC+GGG 0.160278 7_4:-27762062 None:intergenic
TGAGGTAGACGCTTTATTTA+AGG 0.212741 7_4:+27765219 Msa1148000:CDS
TGTATCTCTCGTTACAATTA+AGG 0.218636 7_4:+27764991 Msa1148000:CDS
TCAGCTTGGACGTCGGGGTT+TGG 0.221112 7_4:+27763631 Msa1148000:CDS
CAGCTTGGACGTCGGGGTTT+GGG 0.251535 7_4:+27763632 Msa1148000:CDS
TCCTTGTTGGTGGATCTTCT+AGG 0.269778 7_4:+27765377 Msa1148000:CDS
TGCTGAGGAAATTTCGTCTA+TGG 0.274131 7_4:+27764712 Msa1148000:CDS
CGACAGCCTTCCTTTGTCTT+TGG 0.276946 7_4:-27765878 None:intergenic
ACAGATGCTAAGAGACTAAT+TGG 0.278693 7_4:+27764566 Msa1148000:intron
AAGGGAGGATGTGTTGGTTT+CGG 0.286767 7_4:-27762063 None:intergenic
TGATTACCTTCAATACATTA+AGG 0.288680 7_4:-27764865 None:intergenic
GATGAATGCTGCAATTAAAA+AGG 0.304047 7_4:+27766074 Msa1148000:CDS
TGCAATAGTTGCTGCACTTT+CGG 0.309465 7_4:-27765403 None:intergenic
CCGACCCAGAGAGGGTTAAA+AGG 0.313380 7_4:-27762164 None:intergenic
ACATCAATCAACACCAAGTT+TGG 0.324598 7_4:-27765535 None:intergenic
AACGTGAAACCAAGAGAAAC+TGG 0.325647 7_4:-27762249 None:intergenic
GGACCAGTGTGTTTACAAAA+TGG 0.330907 7_4:+27765993 Msa1148000:CDS
GAAGGAAGAGAGGCGATATC+TGG 0.338197 7_4:-27762565 None:intergenic
CCTGATGAGGCTGTTGCTTA+TGG 0.340665 7_4:+27765466 Msa1148000:CDS
AACCCAGAAAACACCGTCTT+TGG 0.345798 7_4:+27763982 Msa1148000:CDS
GAGAGGAGCTCATGAGGATC+TGG 0.350139 7_4:-27762226 None:intergenic
AAATGAAAGTGATGTTCTTC+AGG 0.352646 7_4:+27766128 Msa1148000:CDS
TTGTCTTGGTGTGGGTTGGA+TGG 0.357284 7_4:+27763002 Msa1148000:CDS
ATAGATGCTGGTGTCATTGC+TGG 0.362224 7_4:+27764842 Msa1148000:CDS
GAGGTAGACGCTTTATTTAA+GGG 0.369100 7_4:+27765220 Msa1148000:CDS
TGCTTATGGTGCTGCTGTCC+AGG 0.371749 7_4:+27765480 Msa1148000:CDS
TTTCTTCATCAGCTTCAATC+TGG 0.374821 7_4:+27762187 Msa1148000:CDS
CAGCTTCAATCTGGTTTCGC+TGG 0.376911 7_4:+27762196 Msa1148000:CDS
TGTGGCTCAGCTTGGACGTC+GGG 0.378538 7_4:+27763625 Msa1148000:CDS
AACTCTGCTCTTGTCAATCT+TGG 0.379076 7_4:-27765344 None:intergenic
ATTTGGTGGCAGACCCTCTC+CGG 0.385293 7_4:+27762932 Msa1148000:intron
CACAACAACAAGAAACAATA+AGG 0.386324 7_4:-27762597 None:intergenic
CTCCCGTCCCTTGTATTTGA+GGG 0.391437 7_4:-27764678 None:intergenic
CCATAAGCAACAGCCTCATC+AGG 0.392319 7_4:-27765466 None:intergenic
GCTCCTCTCCCAGTTTCTCT+TGG 0.392351 7_4:+27762240 Msa1148000:CDS
TGCAGTTCTCAACCTCCTTA+AGG 0.393478 7_4:-27765149 None:intergenic
TCTCCCGTCCCTTGTATTTG+AGG 0.402236 7_4:-27764679 None:intergenic
CATATTGATTTCCTCAAACT+TGG 0.404371 7_4:-27765272 None:intergenic
TCTTCATGCACTCATCAAAA+AGG 0.405023 7_4:-27765297 None:intergenic
GGGGTTGTCTTGGTGTGGGT+TGG 0.409662 7_4:+27762998 Msa1148000:CDS
GGAAAATTTGTTGAAGAAGA+AGG 0.411265 7_4:+27766014 Msa1148000:CDS
TGGCCATTCAAGGTCATTGC+GGG 0.412359 7_4:+27764632 Msa1148000:CDS
GTTCCTCTCCGATGTAATTC+CGG 0.412848 7_4:+27762098 Msa1148000:CDS
GGATAAGGTCTTCGAAGTTA+AGG 0.423231 7_4:+27765012 Msa1148000:CDS
TGCTTTGATGTCGATCAAAA+TGG 0.425218 7_4:+27765796 Msa1148000:CDS
CTTGTTGTTGTGGTGGCTGT+TGG 0.428513 7_4:+27762608 Msa1148000:CDS
TTGGGAACCCAAAAGCCTTA+AGG 0.429186 7_4:+27765134 Msa1148000:CDS
GAGGAACGGTTTGGAGAAGA+AGG 0.430845 7_4:-27762082 None:intergenic
GAGGTGGTGGTGACTTTGCG+TGG 0.432177 7_4:+27762977 Msa1148000:CDS
GTTGATGACGTTGTCCTTGT+TGG 0.432346 7_4:+27765364 Msa1148000:CDS
GCTGGGATTGGTGTTCGATC+TGG 0.432564 7_4:+27762274 Msa1148000:CDS
TGCTGGCCTTAATGTATTGA+AGG 0.434400 7_4:+27764859 Msa1148000:CDS
TCTCGTTACAATTAAGGATA+AGG 0.435451 7_4:+27764997 Msa1148000:CDS
GGTGGCTGTTGGTGGTGCGA+TGG 0.436315 7_4:+27762619 Msa1148000:CDS
GACTTTGCGTGGGGTTGTCT+TGG 0.437977 7_4:+27762988 Msa1148000:CDS
GTGGCTGTTGGTGGTGCGAT+GGG 0.438379 7_4:+27762620 Msa1148000:CDS
ACACCAAGTTTGGAACATTC+CGG 0.441078 7_4:-27765525 None:intergenic
CTTGGTGTGGGTTGGATGGA+TGG 0.442815 7_4:+27763006 Msa1148000:CDS
CGTACTCTTGTGTTGCTGTA+TGG 0.443977 7_4:+27761921 Msa1148000:CDS
CATAAACCTCAACGAGGAAA+GGG 0.445810 7_4:-27762664 None:intergenic
CTTTGTTGAGTGGAGGCGTC+CGG 0.446087 7_4:+27765506 Msa1148000:CDS
CTTTGAAATGTGGCTCAGCT+TGG 0.449210 7_4:+27763617 Msa1148000:CDS
CGTCCGGAATGTTCCAAACT+TGG 0.452727 7_4:+27765522 Msa1148000:CDS
GACCCTCTCCGGGGTCTTGG+TGG 0.464607 7_4:+27762943 Msa1148000:intron
TTTGGTGGCAGACCCTCTCC+GGG 0.465832 7_4:+27762933 Msa1148000:intron
TACATCGGAGAGGAACGGTT+TGG 0.465892 7_4:-27762091 None:intergenic
AGAAACAATAAGGTTGGATA+AGG 0.468490 7_4:-27762587 None:intergenic
ACGATCCGGAGTTGCGTTGA+AGG 0.468774 7_4:-27762800 None:intergenic
TTTGTCTTTGACCTTGGTGG+TGG 0.469354 7_4:+27764959 Msa1148000:CDS
CTTATTGTTTCTTGTTGTTG+TGG 0.470740 7_4:+27762598 Msa1148000:CDS
TGCGTGGGGTTGTCTTGGTG+TGG 0.474209 7_4:+27762993 Msa1148000:CDS
ACATCAAAGCATACATCAAA+AGG 0.475211 7_4:-27765784 None:intergenic
AATCACTCGTGCCAAGTTTG+AGG 0.476109 7_4:+27765261 Msa1148000:CDS
GCGTGGGGTTGTCTTGGTGT+GGG 0.477178 7_4:+27762994 Msa1148000:CDS
TATAATGTCGTGGCCATTCA+AGG 0.477936 7_4:+27764622 Msa1148000:CDS
ACTATTGCAGAACTTCTTCA+AGG 0.478697 7_4:+27765417 Msa1148000:CDS
CAAGTTTGAGGAAATCAATA+TGG 0.479099 7_4:+27765273 Msa1148000:CDS
GATGTTGCACCGCTGTCTCT+AGG 0.485299 7_4:+27765553 Msa1148000:CDS
AGGTGGTGGTGACTTTGCGT+GGG 0.487245 7_4:+27762978 Msa1148000:CDS
GAATGCTGTCATTACTGTGC+CGG 0.490204 7_4:+27764787 Msa1148000:CDS
TTGTCTTTGACCTTGGTGGT+GGG 0.491381 7_4:+27764960 Msa1148000:CDS
GAGAAGAAGGGAGGATGTGT+TGG 0.492150 7_4:-27762069 None:intergenic
CGATGTAATTCCGGTGGCGG+TGG 0.493508 7_4:+27762107 Msa1148000:CDS
GTCCAGGCTGCTTTGTTGAG+TGG 0.494089 7_4:+27765496 Msa1148000:CDS
GTTGTTGTGGTGGCTGTTGG+TGG 0.497998 7_4:+27762611 Msa1148000:CDS
AGTTCTCTTGTCAAGGCCAT+AGG 0.499504 7_4:-27764912 None:intergenic
CATGGCAGCTTGATTCTTAG+CGG 0.502229 7_4:-27763959 None:intergenic
ACCGGTGGAGACACTCATCT+TGG 0.502438 7_4:+27765037 Msa1148000:CDS
CCTCATCGCACCACCGCCAC+CGG 0.504492 7_4:-27762117 None:intergenic
TTGTATTTGAGGGAAATCAT+TGG 0.505459 7_4:-27764668 None:intergenic
ACAATAAGGTTGGATAAGGA+AGG 0.510006 7_4:-27762583 None:intergenic
GCCAGTGACAATCATCTCCT+TGG 0.510426 7_4:+27765718 Msa1148000:CDS
TCATGAATGTGGTGATTCCT+AGG 0.511004 7_4:+27765596 Msa1148000:CDS
ACTCCCGCAATGACCTTGAA+TGG 0.511016 7_4:-27764635 None:intergenic
GATGACGTTGTCCTTGTTGG+TGG 0.514611 7_4:+27765367 Msa1148000:CDS
GCTGTTGGTGGTGCGATGGG+TGG 0.515071 7_4:+27762623 Msa1148000:CDS
TAGATTGATTAAAGAAGCCA+AGG 0.515379 7_4:+27765915 Msa1148000:CDS
CCACCTTCTTCAGCCTCTCC+AGG 0.515635 7_4:+27762466 Msa1148000:CDS
CCTTACGACAACGAACGATC+CGG 0.517265 7_4:-27762814 None:intergenic
ACTGGAATCGAAGTATTCCT+AGG 0.520983 7_4:-27765613 None:intergenic
TGATGAGAAATTCTTAAGAA+AGG 0.522400 7_4:+27765951 Msa1148000:CDS
ACAACAAGAAACAATAAGGT+TGG 0.522703 7_4:-27762593 None:intergenic
AATCTCATTCTTACTGCCAG+TGG 0.522791 7_4:-27765848 None:intergenic
AATAAAGAAGGATGTGCCAT+TGG 0.523356 7_4:+27761881 Msa1148000:CDS
CCAATCAGTGGTCTCGATTG+AGG 0.523690 7_4:+27765672 Msa1148000:CDS
ACTTGGATTTGGTGTCAAAA+CGG 0.524629 7_4:+27763045 Msa1148000:CDS
ACATAAACCTCAACGAGGAA+AGG 0.525464 7_4:-27762665 None:intergenic
ACTGCTGCAGCTATTGCCTA+TGG 0.526738 7_4:+27764896 Msa1148000:CDS
AGAGGAGCTCATGAGGATCT+GGG 0.527546 7_4:-27762225 None:intergenic
ATTGTTTCTTGTTGTTGTGG+TGG 0.527714 7_4:+27762601 Msa1148000:CDS
CAACACCCCTTTCCTCGTTG+AGG 0.527762 7_4:+27762658 Msa1148000:CDS
CACAGTTAGTTCTCTTGTCA+AGG 0.528364 7_4:-27764919 None:intergenic
CAAGAAGGTGGTGCGGAGGA+AGG 0.531126 7_4:-27762141 None:intergenic
GGGTCGTAGTTGTAGGCTGA+TGG 0.531494 7_4:+27762385 Msa1148000:intron
AGAGGACTTTGATAATAGAA+TGG 0.534566 7_4:+27765063 Msa1148000:CDS
GTTGGATAAGGAAGGAAGAG+AGG 0.535241 7_4:-27762575 None:intergenic
TTGCACCGCTGTCTCTAGGT+TGG 0.537053 7_4:+27765557 Msa1148000:CDS
CTCCGATGTAATTCCGGTGG+CGG 0.537397 7_4:+27762104 Msa1148000:CDS
ACTAAAGATGAAAGGTTGAT+CGG 0.538954 7_4:+27763931 Msa1148000:intron
AGAATTTCTCATCATCGATA+CGG 0.541045 7_4:-27765942 None:intergenic
ATGTGGCTCAGCTTGGACGT+CGG 0.541743 7_4:+27763624 Msa1148000:CDS
GCAGAACTTCTTCAAGGGGA+AGG 0.543805 7_4:+27765423 Msa1148000:CDS
TTCCCTCAAATACAAGGGAC+GGG 0.544638 7_4:+27764676 Msa1148000:CDS
CGAAAACACCACCAAGACCC+CGG 0.544779 7_4:-27762951 None:intergenic
AATGATTTCCCTCAAATACA+AGG 0.547331 7_4:+27764670 Msa1148000:CDS
CCTCAATCGAGACCACTGAT+TGG 0.548060 7_4:-27765672 None:intergenic
GTTAGGTGCTCTTTGAAATG+TGG 0.548678 7_4:+27763607 Msa1148000:intron
AGGATGGCCGCGAGGAACAA+GGG 0.548741 7_4:-27765764 None:intergenic
CGAAAAGCCACAATAGATGC+TGG 0.549105 7_4:+27764830 Msa1148000:CDS
CCGGATCGTTCGTTGTCGTA+AGG 0.550776 7_4:+27762814 Msa1148000:CDS
CGTAAGGATCGTGGTGCTTG+TGG 0.550828 7_4:+27762830 Msa1148000:CDS
CGACCTGGAGAGGCTGAAGA+AGG 0.552248 7_4:-27762469 None:intergenic
AACGGTTTGGAGAAGAAGGG+AGG 0.552887 7_4:-27762078 None:intergenic
TGCCTCTGTGACCAATGTTG+AGG 0.553812 7_4:+27765201 Msa1148000:CDS
TGAGAATCATTGAAGTAAGC+CGG 0.555352 7_4:-27764806 None:intergenic
CTAGGTTGGAAGGTAATACA+TGG 0.556013 7_4:+27765571 Msa1148000:CDS
ATCCGGAGTTGCGTTGAAGG+AGG 0.557133 7_4:-27762797 None:intergenic
TAGGCAATAGCTGCAGCAGT+TGG 0.557674 7_4:-27764893 None:intergenic
GTCTTCGAAGTTAAGGCCAC+CGG 0.559352 7_4:+27765019 Msa1148000:CDS
ATCCTCCTTCAACGCAACTC+CGG 0.560794 7_4:+27762795 Msa1148000:CDS
AAGGATGGCCGCGAGGAACA+AGG 0.561274 7_4:-27765765 None:intergenic
TCTGCTATGGATAAATCCAC+TGG 0.562455 7_4:+27765832 Msa1148000:CDS
GAACTAACTGTGTGGAAGAA+CGG 0.564105 7_4:+27764930 Msa1148000:CDS
AGGAACGGTTTGGAGAAGAA+GGG 0.567575 7_4:-27762081 None:intergenic
GGCGAAAGTAATGAATGCAC+TGG 0.567772 7_4:+27765972 Msa1148000:CDS
ACCAAGGAGATGATTGTCAC+TGG 0.569232 7_4:-27765719 None:intergenic
AACTGGGAGAGGAGCTCATG+AGG 0.569243 7_4:-27762232 None:intergenic
ATGCTAAGAGACTAATTGGT+AGG 0.569585 7_4:+27764570 Msa1148000:CDS
ATCATCGATACGGTAAGCCT+TGG 0.570350 7_4:-27765932 None:intergenic
GAATAAAACATTACCAAAGA+CGG 0.575237 7_4:-27763995 None:intergenic
CTATTGCAGAACTTCTTCAA+GGG 0.577172 7_4:+27765418 Msa1148000:CDS
CTCCACTCAACAAAGCAGCC+TGG 0.579829 7_4:-27765498 None:intergenic
GGTGGAGACACTCATCTTGG+AGG 0.579968 7_4:+27765040 Msa1148000:CDS
GGTCTCGATTGAGGTCTATG+AGG 0.580269 7_4:+27765681 Msa1148000:CDS
GAGAGGGTTAAAAGGCAAGA+AGG 0.580657 7_4:-27762156 None:intergenic
CGAGGAAAGGGGTGTTGCAG+AGG 0.581520 7_4:-27762652 None:intergenic
ACCGCTGTCTCTAGGTTGGA+AGG 0.589081 7_4:+27765561 Msa1148000:CDS
GGTGGATTGGTTTCACGTGG+TGG 0.590354 7_4:+27762418 Msa1148000:CDS
AACCACAAACCGACCTGGAG+AGG 0.590564 7_4:-27762479 None:intergenic
TAGGAAGTTTAGTGATCCTG+TGG 0.594709 7_4:+27764589 Msa1148000:CDS
CAATAACCAAAGACAAAGGA+AGG 0.595306 7_4:+27765872 Msa1148000:CDS
TTTCCCTCAAATACAAGGGA+CGG 0.597086 7_4:+27764675 Msa1148000:CDS
TCCAAGATGAGTGTCTCCAC+CGG 0.598350 7_4:-27765038 None:intergenic
GCTGTATGGCATGAAGAACT+TGG 0.600605 7_4:+27761935 Msa1148000:CDS
AGAGGAATATCTAGAATCAT+CGG 0.603302 7_4:+27764760 Msa1148000:CDS
TATTGCAGAACTTCTTCAAG+GGG 0.604356 7_4:+27765419 Msa1148000:CDS
TTCGAAGTTAAGGCCACCGG+TGG 0.604384 7_4:+27765022 Msa1148000:CDS
TGTACCAAGGTCTATTCCAA+TGG 0.612895 7_4:-27761897 None:intergenic
GTCTCGATTGAGGTCTATGA+GGG 0.613073 7_4:+27765682 Msa1148000:CDS
CAAATGGTGCCGCATATAGA+CGG 0.614528 7_4:-27763809 None:intergenic
CACCACCAAGACCCCGGAGA+GGG 0.614650 7_4:-27762945 None:intergenic
GTGGCCATTCAAGGTCATTG+CGG 0.614653 7_4:+27764631 Msa1148000:CDS
CCGGTGGCGGTGGTGCGATG+AGG 0.614957 7_4:+27762117 Msa1148000:CDS
CAAAGCATACATCAAAAGGA+TGG 0.615551 7_4:-27765780 None:intergenic
GTTCGTTGTCGTAAGGATCG+TGG 0.616015 7_4:+27762821 Msa1148000:CDS
AATGACACCAGCATCTATTG+TGG 0.616158 7_4:-27764837 None:intergenic
ATGAAGAAACCGACCCAGAG+AGG 0.616554 7_4:-27762173 None:intergenic
GGATGGCCGCGAGGAACAAG+GGG 0.617176 7_4:-27765763 None:intergenic
GTGGCTCAGCTTGGACGTCG+GGG 0.618812 7_4:+27763626 Msa1148000:CDS
TGTGCCATTGGAATAGACCT+TGG 0.619321 7_4:+27761893 Msa1148000:CDS
AGACACTCATCTTGGAGGAG+AGG 0.620209 7_4:+27765045 Msa1148000:CDS
CAAGAGTATCAACCCTGATG+AGG 0.620482 7_4:+27765453 Msa1148000:CDS
GAACAAGGGGTAAACCTGAA+AGG 0.621308 7_4:-27765750 None:intergenic
AAGATGAGTGTCTCCACCGG+TGG 0.623334 7_4:-27765035 None:intergenic
TAAAGCGTCTACCTCAACAT+TGG 0.623696 7_4:-27765212 None:intergenic
CACCGCCACCGGAATTACAT+CGG 0.624078 7_4:-27762106 None:intergenic
CCTGGAGAGGCTGAAGAAGG+TGG 0.628451 7_4:-27762466 None:intergenic
CATAAGCAACAGCCTCATCA+GGG 0.634330 7_4:-27765465 None:intergenic
CTGAAAGGAAGAAAGAACCA+AGG 0.634589 7_4:-27765735 None:intergenic
GGAACCCAAAAGCCTTAAGG+AGG 0.634999 7_4:+27765137 Msa1148000:CDS
CAGGCTGCTTTGTTGAGTGG+AGG 0.635073 7_4:+27765499 Msa1148000:CDS
AAACCAAGAGAAACTGGGAG+AGG 0.638490 7_4:-27762243 None:intergenic
GGAATTACATCGGAGAGGAA+CGG 0.645652 7_4:-27762096 None:intergenic
AATCAAAGATAACCAATCAG+TGG 0.646467 7_4:+27765660 Msa1148000:CDS
TCGTAGTTGTAGGCTGATGG+TGG 0.649379 7_4:+27762388 Msa1148000:intron
ATTACAATAACCAAAGACAA+AGG 0.650806 7_4:+27765868 Msa1148000:CDS
CCTCTCCGATGTAATTCCGG+TGG 0.651429 7_4:+27762101 Msa1148000:CDS
TGAAGAAACCGACCCAGAGA+GGG 0.651728 7_4:-27762172 None:intergenic
AAGGCAAGAAGGTGGTGCGG+AGG 0.655213 7_4:-27762145 None:intergenic
ACGTGAAACCAAGAGAAACT+GGG 0.658767 7_4:-27762248 None:intergenic
ATAAACCTCAACGAGGAAAG+GGG 0.660605 7_4:-27762663 None:intergenic
AGGGTTAAAAGGCAAGAAGG+TGG 0.661337 7_4:-27762153 None:intergenic
TATGGTGTACCGTCTATATG+CGG 0.664617 7_4:+27763800 Msa1148000:CDS
TCCTAGAAGATCCACCAACA+AGG 0.665374 7_4:-27765378 None:intergenic
CGTTGAAGGAGGATTAATCG+TGG 0.667555 7_4:-27762786 None:intergenic
GGTTTACCCCTTGTTCCTCG+CGG 0.674187 7_4:+27765757 Msa1148000:CDS
CACAAGAGTACGTTGTACCA+AGG 0.678701 7_4:-27761910 None:intergenic
ATGATTTCCCTCAAATACAA+GGG 0.679831 7_4:+27764671 Msa1148000:CDS
TAAAAGGCAAGAAGGTGGTG+CGG 0.680462 7_4:-27762148 None:intergenic
GGTGGTGGTGACTTTGCGTG+GGG 0.682465 7_4:+27762979 Msa1148000:CDS
AATACATGGTGTCATGAATG+TGG 0.682485 7_4:+27765585 Msa1148000:CDS
GTTGGTGGATTGGTTTCACG+TGG 0.686592 7_4:+27762415 Msa1148000:CDS
AAAGATGCGAGAGATTGCAG+AGG 0.697267 7_4:+27764742 Msa1148000:CDS
ACCTTCCAACCTAGAGACAG+CGG 0.701282 7_4:-27765562 None:intergenic
CATCAAAAGTCCCACCACCA+AGG 0.704274 7_4:-27764970 None:intergenic
TTGGTGGCAGACCCTCTCCG+GGG 0.706665 7_4:+27762934 Msa1148000:intron
ACACCACCAAGACCCCGGAG+AGG 0.711694 7_4:-27762946 None:intergenic
CCACCGGAATTACATCGGAG+AGG 0.716888 7_4:-27762101 None:intergenic
ACATCAAAAGGATGGCCGCG+AGG 0.721153 7_4:-27765772 None:intergenic
TGACAAGAGAACTAACTGTG+TGG 0.734599 7_4:+27764922 Msa1148000:CDS
TACCTCAACATTGGTCACAG+AGG 0.735168 7_4:-27765203 None:intergenic
GACAAACATAAACCTCAACG+AGG 0.774526 7_4:-27762670 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATTTAGGATAAATTTT+AGG + chr7_4:27764129-27764148 Msa1148000:intron 10.0%
!!! AATAAAAAATATTTTTTGGT+TGG - chr7_4:27764203-27764222 None:intergenic 10.0%
!!! ATATTTTTTATTAGATTTGA+TGG + chr7_4:27764211-27764230 Msa1148000:intron 10.0%
!!! TATTTTTTATTAGATTTGAT+GGG + chr7_4:27764212-27764231 Msa1148000:intron 10.0%
!!! ATATATTAAAACTTTGTTTT+AGG + chr7_4:27764273-27764292 Msa1148000:intron 10.0%
!!! GTTTTGTTTTTTTTTTGAAT+CGG - chr7_4:27763889-27763908 None:intergenic 15.0%
!!! ACAAAGTTTTAATATATATG+TGG - chr7_4:27764270-27764289 None:intergenic 15.0%
!! AATAATGAAAAGTAAAAACT+TGG - chr7_4:27764416-27764435 None:intergenic 15.0%
!! AAGAAAAAATTGAAAATTGT+TGG + chr7_4:27765115-27765134 Msa1148000:CDS 15.0%
!! AGAAAAAATTGAAAATTGTT+GGG + chr7_4:27765116-27765135 Msa1148000:CDS 15.0%
!!! CAATCTTTTATATACTATTG+AGG + chr7_4:27764046-27764065 Msa1148000:intron 20.0%
!!! AAAAATATTTTTTGGTTGGA+TGG - chr7_4:27764199-27764218 None:intergenic 20.0%
!! CACTTACTATTGAAAATTAT+TGG + chr7_4:27764299-27764318 Msa1148000:intron 20.0%
!! TTCCTTTTCAATTTCAGTTT+TGG + chr7_4:27762897-27762916 Msa1148000:intron 25.0%
!! ACTAAAGTATCAAATTAGCA+GGG - chr7_4:27763456-27763475 None:intergenic 25.0%
!!! TTTGTCTTAAGTTGGTTTTT+GGG + chr7_4:27763519-27763538 Msa1148000:intron 25.0%
! TTAGTAAAAGCAACAAAAGA+AGG - chr7_4:27763916-27763935 None:intergenic 25.0%
!!! TTGCTTTTACTAAAGATGAA+AGG + chr7_4:27763923-27763942 Msa1148000:intron 25.0%
! GAATAAAACATTACCAAAGA+CGG - chr7_4:27763998-27764017 None:intergenic 25.0%
! GTAACATTCATAAAAAGACA+AGG - chr7_4:27764075-27764094 None:intergenic 25.0%
! TACACATATGTTTAATCTTC+AGG + chr7_4:27764092-27764111 Msa1148000:intron 25.0%
!! TGTTGGTAGGTAAAAAATTT+AGG + chr7_4:27764117-27764136 Msa1148000:intron 25.0%
! TGATTACCTTCAATACATTA+AGG - chr7_4:27764868-27764887 None:intergenic 25.0%
!!! AATATTTTTGTCTTTGACCT+TGG + chr7_4:27764953-27764972 Msa1148000:CDS 25.0%
! ATTACAATAACCAAAGACAA+AGG + chr7_4:27765868-27765887 Msa1148000:CDS 25.0%
! TGATGAGAAATTCTTAAGAA+AGG + chr7_4:27765951-27765970 Msa1148000:CDS 25.0%
GAGATTATTCACAATGATCA+AGG + chr7_4:27761965-27761984 Msa1148000:intron 30.0%
AGAAACAATAAGGTTGGATA+AGG - chr7_4:27762590-27762609 None:intergenic 30.0%
ACAACAAGAAACAATAAGGT+TGG - chr7_4:27762596-27762615 None:intergenic 30.0%
CACAACAACAAGAAACAATA+AGG - chr7_4:27762600-27762619 None:intergenic 30.0%
!! CTTATTGTTTCTTGTTGTTG+TGG + chr7_4:27762598-27762617 Msa1148000:CDS 30.0%
CACCAAAACTGAAATTGAAA+AGG - chr7_4:27762902-27762921 None:intergenic 30.0%
!! CTTTTCAATTTCAGTTTTGG+TGG + chr7_4:27762900-27762919 Msa1148000:intron 30.0%
!!! GATTTTTTTGGACTTGGATT+TGG + chr7_4:27763034-27763053 Msa1148000:CDS 30.0%
GTAACAAAAGTTGCTTCTAA+AGG - chr7_4:27763158-27763177 None:intergenic 30.0%
! TAGAAGCAACTTTTGTTACA+CGG + chr7_4:27763159-27763178 Msa1148000:intron 30.0%
ATCGAAAATCAACACACAAT+AGG - chr7_4:27763333-27763352 None:intergenic 30.0%
!!! TATTGTGTGTTGATTTTCGA+TGG + chr7_4:27763332-27763351 Msa1148000:intron 30.0%
!!! ATTGTGTGTTGATTTTCGAT+GGG + chr7_4:27763333-27763352 Msa1148000:intron 30.0%
! GACTAAAGTATCAAATTAGC+AGG - chr7_4:27763457-27763476 None:intergenic 30.0%
GCTAATTTGATACTTTAGTC+TGG + chr7_4:27763457-27763476 Msa1148000:intron 30.0%
AATTTGATACTTTAGTCTGG+TGG + chr7_4:27763460-27763479 Msa1148000:intron 30.0%
ATTTGATACTTTAGTCTGGT+GGG + chr7_4:27763461-27763480 Msa1148000:intron 30.0%
!!! CTTTGTCTTAAGTTGGTTTT+TGG + chr7_4:27763518-27763537 Msa1148000:intron 30.0%
!!! GTTTGGGAGTTTTATTTTGA+GGG + chr7_4:27763648-27763667 Msa1148000:CDS 30.0%
!!! TTTATTTTGAGGGTGTTCTT+CGG + chr7_4:27763658-27763677 Msa1148000:CDS 30.0%
! AAAAACAAGCACTGTAAACA+CGG - chr7_4:27763716-27763735 None:intergenic 30.0%
!!! GTTTACAGTGCTTGTTTTTA+TGG + chr7_4:27763717-27763736 Msa1148000:intron 30.0%
!! GTTTTTATGGAGCTTGTTTT+AGG + chr7_4:27763730-27763749 Msa1148000:intron 30.0%
!! TTTTAGGTGGTGATGTATTT+TGG + chr7_4:27763746-27763765 Msa1148000:intron 30.0%
! ACTAAAGATGAAAGGTTGAT+CGG + chr7_4:27763931-27763950 Msa1148000:intron 30.0%
ACATTCATAAAAAGACAAGG+AGG - chr7_4:27764072-27764091 None:intergenic 30.0%
TGTTTAATCTTCAGGAATGT+TGG + chr7_4:27764100-27764119 Msa1148000:intron 30.0%
ACTACTAAAACCCTAACTTT+AGG + chr7_4:27764173-27764192 Msa1148000:intron 30.0%
! ATTATATCTTTTTGGACCAC+AGG - chr7_4:27764608-27764627 None:intergenic 30.0%
TCCAAAAAGATATAATGTCG+TGG + chr7_4:27764612-27764631 Msa1148000:CDS 30.0%
TTGTATTTGAGGGAAATCAT+TGG - chr7_4:27764671-27764690 None:intergenic 30.0%
AATGATTTCCCTCAAATACA+AGG + chr7_4:27764670-27764689 Msa1148000:CDS 30.0%
ATGATTTCCCTCAAATACAA+GGG + chr7_4:27764671-27764690 Msa1148000:CDS 30.0%
! AGAGGAATATCTAGAATCAT+CGG + chr7_4:27764760-27764779 Msa1148000:CDS 30.0%
TGTATCTCTCGTTACAATTA+AGG + chr7_4:27764991-27765010 Msa1148000:CDS 30.0%
TCTCGTTACAATTAAGGATA+AGG + chr7_4:27764997-27765016 Msa1148000:CDS 30.0%
! AGAGGACTTTGATAATAGAA+TGG + chr7_4:27765063-27765082 Msa1148000:CDS 30.0%
! AATGGTGTACTATTTTGTAG+AGG + chr7_4:27765081-27765100 Msa1148000:CDS 30.0%
! ATTTTGTAGAGGAGATCAAA+AGG + chr7_4:27765092-27765111 Msa1148000:CDS 30.0%
!! CATATTGATTTCCTCAAACT+TGG - chr7_4:27765275-27765294 None:intergenic 30.0%
CAAGTTTGAGGAAATCAATA+TGG + chr7_4:27765273-27765292 Msa1148000:CDS 30.0%
! TATTTTCTTGTCTTCTTGAC+TGG - chr7_4:27765634-27765653 None:intergenic 30.0%
AATCAAAGATAACCAATCAG+TGG + chr7_4:27765660-27765679 Msa1148000:CDS 30.0%
ACATCAAAGCATACATCAAA+AGG - chr7_4:27765787-27765806 None:intergenic 30.0%
TAGATTGATTAAAGAAGCCA+AGG + chr7_4:27765915-27765934 Msa1148000:CDS 30.0%
AGAATTTCTCATCATCGATA+CGG - chr7_4:27765945-27765964 None:intergenic 30.0%
! TTTCCATTTTGTAAACACAC+TGG - chr7_4:27765999-27766018 None:intergenic 30.0%
!! GGAAAATTTGTTGAAGAAGA+AGG + chr7_4:27766014-27766033 Msa1148000:CDS 30.0%
GATGAATGCTGCAATTAAAA+AGG + chr7_4:27766074-27766093 Msa1148000:CDS 30.0%
! ATTCTCATCAAGCAATTTTG+TGG - chr7_4:27766100-27766119 None:intergenic 30.0%
! GAACATCACTTTCATTTTGA+CGG - chr7_4:27766125-27766144 None:intergenic 30.0%
AAATGAAAGTGATGTTCTTC+AGG + chr7_4:27766128-27766147 Msa1148000:CDS 30.0%
!! ACTCTATTTTAAGTCCTACT+AGG + chr7_4:27766190-27766209 Msa1148000:CDS 30.0%
TGAGAACATAAAAACCTAGT+AGG - chr7_4:27766207-27766226 None:intergenic 30.0%
AATAAAGAAGGATGTGCCAT+TGG + chr7_4:27761881-27761900 Msa1148000:CDS 35.0%
!! AGAGAGAGAAGCTATTTTGA+AGG - chr7_4:27762004-27762023 None:intergenic 35.0%
!! GGGAAAAAACTTTTAGAGAG+AGG - chr7_4:27762045-27762064 None:intergenic 35.0%
TTTCTTCATCAGCTTCAATC+TGG + chr7_4:27762187-27762206 Msa1148000:CDS 35.0%
ACAATAAGGTTGGATAAGGA+AGG - chr7_4:27762586-27762605 None:intergenic 35.0%
!! ATTGTTTCTTGTTGTTGTGG+TGG + chr7_4:27762601-27762620 Msa1148000:CDS 35.0%
AGGTTTATGTTTGTCCAGAT+CGG + chr7_4:27762678-27762697 Msa1148000:intron 35.0%
!! TTTGGTGGTTTTGCTTGATT+TGG + chr7_4:27762915-27762934 Msa1148000:intron 35.0%
!! ACTTGGATTTGGTGTCAAAA+CGG + chr7_4:27763045-27763064 Msa1148000:CDS 35.0%
!! TAGTTGGTGTTGTTTAAGTG+AGG + chr7_4:27763095-27763114 Msa1148000:intron 35.0%
! AGAAGCAACTTTTGTTACAC+GGG + chr7_4:27763160-27763179 Msa1148000:intron 35.0%
!! TAGCTCTCTTTGTGCTTTTT+GGG + chr7_4:27763200-27763219 Msa1148000:intron 35.0%
AATAGGTAAGACGAAAGACA+TGG - chr7_4:27763316-27763335 None:intergenic 35.0%
!! AATCGTTGTTTGACTTGGTT+TGG + chr7_4:27763399-27763418 Msa1148000:intron 35.0%
GATCTCGAATCAAAAGTGAT+CGG - chr7_4:27763487-27763506 None:intergenic 35.0%
!! GATCACTTTTGATTCGAGAT+CGG + chr7_4:27763486-27763505 Msa1148000:intron 35.0%
!! ATCACTTTTGATTCGAGATC+GGG + chr7_4:27763487-27763506 Msa1148000:intron 35.0%
GTCAGTTCTTTGTCTTAAGT+TGG + chr7_4:27763511-27763530 Msa1148000:intron 35.0%
!!! GGTTTGGGAGTTTTATTTTG+AGG + chr7_4:27763647-27763666 Msa1148000:CDS 35.0%
!!! TTATTTTGAGGGTGTTCTTC+GGG + chr7_4:27763659-27763678 Msa1148000:CDS 35.0%
!!! TTTATGGAGCTTGTTTTAGG+TGG + chr7_4:27763733-27763752 Msa1148000:intron 35.0%
!! ATTTTGGTGAGTTTATCTCC+AGG + chr7_4:27763762-27763781 Msa1148000:intron 35.0%
! TTTTGGTGAGTTTATCTCCA+GGG + chr7_4:27763763-27763782 Msa1148000:intron 35.0%
! ATGGACGAAAAAGGTACAAA+TGG - chr7_4:27763828-27763847 None:intergenic 35.0%
TAATCTTCAGGAATGTTGGT+AGG + chr7_4:27764104-27764123 Msa1148000:intron 35.0%
CCGAAACATACCTAAAAACA+GGG - chr7_4:27764329-27764348 None:intergenic 35.0%
!!! CCCTGTTTTTAGGTATGTTT+CGG + chr7_4:27764326-27764345 Msa1148000:intron 35.0%
ACCGAAACATACCTAAAAAC+AGG - chr7_4:27764330-27764349 None:intergenic 35.0%
!!! TGTTTCGGTCTCTGATTTTT+TGG + chr7_4:27764341-27764360 Msa1148000:intron 35.0%
!!! GTTTCGGTCTCTGATTTTTT+GGG + chr7_4:27764342-27764361 Msa1148000:intron 35.0%
TCATGTGTCCTATTAACAGT+GGG - chr7_4:27764527-27764546 None:intergenic 35.0%
TTCATGTGTCCTATTAACAG+TGG - chr7_4:27764528-27764547 None:intergenic 35.0%
ACAGATGCTAAGAGACTAAT+TGG + chr7_4:27764566-27764585 Msa1148000:intron 35.0%
ATGCTAAGAGACTAATTGGT+AGG + chr7_4:27764570-27764589 Msa1148000:CDS 35.0%
! GCCACGACATTATATCTTTT+TGG - chr7_4:27764616-27764635 None:intergenic 35.0%
TGAGAATCATTGAAGTAAGC+CGG - chr7_4:27764809-27764828 None:intergenic 35.0%
! ATTTTTGTCTTTGACCTTGG+TGG + chr7_4:27764956-27764975 Msa1148000:CDS 35.0%
CTGCATGTGAAAAAGCAAAA+AGG + chr7_4:27765167-27765186 Msa1148000:CDS 35.0%
!! TGAGGTAGACGCTTTATTTA+AGG + chr7_4:27765219-27765238 Msa1148000:CDS 35.0%
!! GAGGTAGACGCTTTATTTAA+GGG + chr7_4:27765220-27765239 Msa1148000:CDS 35.0%
TCTTCATGCACTCATCAAAA+AGG - chr7_4:27765300-27765319 None:intergenic 35.0%
ACTATTGCAGAACTTCTTCA+AGG + chr7_4:27765417-27765436 Msa1148000:CDS 35.0%
CTATTGCAGAACTTCTTCAA+GGG + chr7_4:27765418-27765437 Msa1148000:CDS 35.0%
TATTGCAGAACTTCTTCAAG+GGG + chr7_4:27765419-27765438 Msa1148000:CDS 35.0%
ACATCAATCAACACCAAGTT+TGG - chr7_4:27765538-27765557 None:intergenic 35.0%
!! AATACATGGTGTCATGAATG+TGG + chr7_4:27765585-27765604 Msa1148000:CDS 35.0%
CAAAGCATACATCAAAAGGA+TGG - chr7_4:27765783-27765802 None:intergenic 35.0%
TGCTTTGATGTCGATCAAAA+TGG + chr7_4:27765796-27765815 Msa1148000:CDS 35.0%
!! CATTTTGACAGTTTCTGCTA+TGG + chr7_4:27765819-27765838 Msa1148000:CDS 35.0%
CAATAACCAAAGACAAAGGA+AGG + chr7_4:27765872-27765891 Msa1148000:CDS 35.0%
TGTACCAAGGTCTATTCCAA+TGG - chr7_4:27761900-27761919 None:intergenic 40.0%
!! AACTTTTAGAGAGAGGTCAG+AGG - chr7_4:27762038-27762057 None:intergenic 40.0%
ACGTGAAACCAAGAGAAACT+GGG - chr7_4:27762251-27762270 None:intergenic 40.0%
AACGTGAAACCAAGAGAAAC+TGG - chr7_4:27762252-27762271 None:intergenic 40.0%
! TCTTGGTTTCACGTTTTGCT+GGG + chr7_4:27762257-27762276 Msa1148000:CDS 40.0%
! ATTGGTGTTCGATCTGGTTT+GGG + chr7_4:27762280-27762299 Msa1148000:intron 40.0%
!! TTTGGGTTGTTTGCGTTTCT+AGG + chr7_4:27762297-27762316 Msa1148000:intron 40.0%
!! TTTCTCCGCTCTGTTTTGTT+CGG + chr7_4:27762508-27762527 Msa1148000:intron 40.0%
CGTTTCTGTCATGTTCAGTT+TGG + chr7_4:27762540-27762559 Msa1148000:intron 40.0%
ATAAACCTCAACGAGGAAAG+GGG - chr7_4:27762666-27762685 None:intergenic 40.0%
CATAAACCTCAACGAGGAAA+GGG - chr7_4:27762667-27762686 None:intergenic 40.0%
ACATAAACCTCAACGAGGAA+AGG - chr7_4:27762668-27762687 None:intergenic 40.0%
GACAAACATAAACCTCAACG+AGG - chr7_4:27762673-27762692 None:intergenic 40.0%
TGTTTAGCTGGGTTTGATAG+TGG + chr7_4:27762705-27762724 Msa1148000:intron 40.0%
!!! TGGATGGTCGTCGATTTTTT+TGG + chr7_4:27763022-27763041 Msa1148000:CDS 40.0%
!!! GTCGTCGATTTTTTTGGACT+TGG + chr7_4:27763028-27763047 Msa1148000:CDS 40.0%
!! TTTGGTGTCAAAACGGTTTG+CGG + chr7_4:27763052-27763071 Msa1148000:intron 40.0%
GAGCAATAATTGAGGGTAGT+TGG + chr7_4:27763079-27763098 Msa1148000:intron 40.0%
!! TTGGTGTTGTTTAAGTGAGG+AGG + chr7_4:27763098-27763117 Msa1148000:intron 40.0%
! TGTTGTTTAAGTGAGGAGGT+GGG + chr7_4:27763102-27763121 Msa1148000:intron 40.0%
!! CTAGCTCTCTTTGTGCTTTT+TGG + chr7_4:27763199-27763218 Msa1148000:intron 40.0%
!!! TTGTGCTTTTTGGGTGGTTT+AGG + chr7_4:27763209-27763228 Msa1148000:intron 40.0%
TTGGGTGGTTTAGGTGTTTA+CGG + chr7_4:27763218-27763237 Msa1148000:intron 40.0%
GTTTAGGTGTTTACGGAGTT+TGG + chr7_4:27763225-27763244 Msa1148000:intron 40.0%
!!! GACTTGGTTTGGTTTTTCTC+TGG + chr7_4:27763410-27763429 Msa1148000:intron 40.0%
!! GTTAGGTGCTCTTTGAAATG+TGG + chr7_4:27763607-27763626 Msa1148000:intron 40.0%
!!! TATTTTGAGGGTGTTCTTCG+GGG + chr7_4:27763660-27763679 Msa1148000:CDS 40.0%
TTTGGTGAGTTTATCTCCAG+GGG + chr7_4:27763764-27763783 Msa1148000:intron 40.0%
!!! TTTATCTCCAGGGGTGTTTT+AGG + chr7_4:27763773-27763792 Msa1148000:intron 40.0%
!!! TTATCTCCAGGGGTGTTTTA+GGG + chr7_4:27763774-27763793 Msa1148000:intron 40.0%
TATGGTGTACCGTCTATATG+CGG + chr7_4:27763800-27763819 Msa1148000:CDS 40.0%
! TACCAAAGACGGTGTTTTCT+GGG - chr7_4:27763987-27764006 None:intergenic 40.0%
! TTACCAAAGACGGTGTTTTC+TGG - chr7_4:27763988-27764007 None:intergenic 40.0%
TAGTAGTCGTACCTTTGGAT+AGG - chr7_4:27764160-27764179 None:intergenic 40.0%
!! GGTTTTAGTAGTCGTACCTT+TGG - chr7_4:27764165-27764184 None:intergenic 40.0%
!!! AGTTTTTTGTCTGCACACGA+GGG - chr7_4:27764246-27764265 None:intergenic 40.0%
AACATACCTAAAAACAGGGC+AGG - chr7_4:27764325-27764344 None:intergenic 40.0%
TTAACAGTGGGATGCAATCA+TGG - chr7_4:27764515-27764534 None:intergenic 40.0%
GATTGCATCCCACTGTTAAT+AGG + chr7_4:27764516-27764535 Msa1148000:intron 40.0%
TAGGAAGTTTAGTGATCCTG+TGG + chr7_4:27764589-27764608 Msa1148000:CDS 40.0%
TATAATGTCGTGGCCATTCA+AGG + chr7_4:27764622-27764641 Msa1148000:CDS 40.0%
TTTCCCTCAAATACAAGGGA+CGG + chr7_4:27764675-27764694 Msa1148000:CDS 40.0%
TGCTGAGGAAATTTCGTCTA+TGG + chr7_4:27764712-27764731 Msa1148000:CDS 40.0%
AATGACACCAGCATCTATTG+TGG - chr7_4:27764840-27764859 None:intergenic 40.0%
!! TGCTGGCCTTAATGTATTGA+AGG + chr7_4:27764859-27764878 Msa1148000:CDS 40.0%
! CACAGTTAGTTCTCTTGTCA+AGG - chr7_4:27764922-27764941 None:intergenic 40.0%
TGACAAGAGAACTAACTGTG+TGG + chr7_4:27764922-27764941 Msa1148000:CDS 40.0%
GAACTAACTGTGTGGAAGAA+CGG + chr7_4:27764930-27764949 Msa1148000:CDS 40.0%
GGATAAGGTCTTCGAAGTTA+AGG + chr7_4:27765012-27765031 Msa1148000:CDS 40.0%
! TCAACCTCCTTAAGGCTTTT+GGG - chr7_4:27765144-27765163 None:intergenic 40.0%
! TAAAGCGTCTACCTCAACAT+TGG - chr7_4:27765215-27765234 None:intergenic 40.0%
AACTCTGCTCTTGTCAATCT+TGG - chr7_4:27765347-27765366 None:intergenic 40.0%
TGCAATAGTTGCTGCACTTT+CGG - chr7_4:27765406-27765425 None:intergenic 40.0%
! ACACCAAGTTTGGAACATTC+CGG - chr7_4:27765528-27765547 None:intergenic 40.0%
! CTAGGTTGGAAGGTAATACA+TGG + chr7_4:27765571-27765590 Msa1148000:CDS 40.0%
TCATGAATGTGGTGATTCCT+AGG + chr7_4:27765596-27765615 Msa1148000:CDS 40.0%
! ACTGGAATCGAAGTATTCCT+AGG - chr7_4:27765616-27765635 None:intergenic 40.0%
CTGAAAGGAAGAAAGAACCA+AGG - chr7_4:27765738-27765757 None:intergenic 40.0%
! CTTGGTTCTTTCTTCCTTTC+AGG + chr7_4:27765736-27765755 Msa1148000:CDS 40.0%
TCTGCTATGGATAAATCCAC+TGG + chr7_4:27765832-27765851 Msa1148000:CDS 40.0%
AATCTCATTCTTACTGCCAG+TGG - chr7_4:27765851-27765870 None:intergenic 40.0%
GGACCAGTGTGTTTACAAAA+TGG + chr7_4:27765993-27766012 Msa1148000:CDS 40.0%
! TGTGCCATTGGAATAGACCT+TGG + chr7_4:27761893-27761912 Msa1148000:CDS 45.0%
! CACAAGAGTACGTTGTACCA+AGG - chr7_4:27761913-27761932 None:intergenic 45.0%
! CGTACTCTTGTGTTGCTGTA+TGG + chr7_4:27761921-27761940 Msa1148000:CDS 45.0%
GCTGTATGGCATGAAGAACT+TGG + chr7_4:27761935-27761954 Msa1148000:CDS 45.0%
!! AAGGGAGGATGTGTTGGTTT+CGG - chr7_4:27762066-27762085 None:intergenic 45.0%
! AGGAACGGTTTGGAGAAGAA+GGG - chr7_4:27762084-27762103 None:intergenic 45.0%
GGAATTACATCGGAGAGGAA+CGG - chr7_4:27762099-27762118 None:intergenic 45.0%
GTTCCTCTCCGATGTAATTC+CGG + chr7_4:27762098-27762117 Msa1148000:CDS 45.0%
TAAAAGGCAAGAAGGTGGTG+CGG - chr7_4:27762151-27762170 None:intergenic 45.0%
AGGGTTAAAAGGCAAGAAGG+TGG - chr7_4:27762156-27762175 None:intergenic 45.0%
GAGAGGGTTAAAAGGCAAGA+AGG - chr7_4:27762159-27762178 None:intergenic 45.0%
! TCTTGCCTTTTAACCCTCTC+TGG + chr7_4:27762159-27762178 Msa1148000:CDS 45.0%
! CTTGCCTTTTAACCCTCTCT+GGG + chr7_4:27762160-27762179 Msa1148000:CDS 45.0%
AAACCAAGAGAAACTGGGAG+AGG - chr7_4:27762246-27762265 None:intergenic 45.0%
! CTCTTGGTTTCACGTTTTGC+TGG + chr7_4:27762256-27762275 Msa1148000:CDS 45.0%
! GTTTCACGTTTTGCTGGGAT+TGG + chr7_4:27762262-27762281 Msa1148000:CDS 45.0%
! GATTGGTGTTCGATCTGGTT+TGG + chr7_4:27762279-27762298 Msa1148000:intron 45.0%
GCTTGGAACTTGCGATCTAT+TGG + chr7_4:27762328-27762347 Msa1148000:intron 45.0%
TGGAACTTGCGATCTATTGG+TGG + chr7_4:27762331-27762350 Msa1148000:intron 45.0%
GGAACTTGCGATCTATTGGT+GGG + chr7_4:27762332-27762351 Msa1148000:intron 45.0%
! TTGCGATCTATTGGTGGGTA+GGG + chr7_4:27762337-27762356 Msa1148000:intron 45.0%
!! TGGTTCTTTTGTGGTGGTGT+TGG + chr7_4:27762361-27762380 Msa1148000:intron 45.0%
!! TTCTTTTGTGGTGGTGTTGG+TGG + chr7_4:27762364-27762383 Msa1148000:intron 45.0%
!!! TCTTTTGTGGTGGTGTTGGT+GGG + chr7_4:27762365-27762384 Msa1148000:intron 45.0%
!!! TAGGCTGATGGTGGTTTTGT+TGG + chr7_4:27762397-27762416 Msa1148000:intron 45.0%
!!! TGGTGGTTTTGTTGGTGGAT+TGG + chr7_4:27762405-27762424 Msa1148000:CDS 45.0%
!!! CGTGGTGGTTTTGTTGTTGT+TGG + chr7_4:27762433-27762452 Msa1148000:CDS 45.0%
!!! GGTGGTTTTGTTGTTGTTGG+TGG + chr7_4:27762436-27762455 Msa1148000:CDS 45.0%
!! TTCTCCGCTCTGTTTTGTTC+GGG + chr7_4:27762509-27762528 Msa1148000:intron 45.0%
AAGACCCGAACAAAACAGAG+CGG - chr7_4:27762516-27762535 None:intergenic 45.0%
GTTGGATAAGGAAGGAAGAG+AGG - chr7_4:27762578-27762597 None:intergenic 45.0%
AGATCGGTGACTGTTTAGCT+GGG + chr7_4:27762694-27762713 Msa1148000:intron 45.0%
!! CTGGGTTTGATAGTGGTGAT+AGG + chr7_4:27762712-27762731 Msa1148000:intron 45.0%
CGTTGAAGGAGGATTAATCG+TGG - chr7_4:27762789-27762808 None:intergenic 45.0%
!!! GGTGGTTTTGCTTGATTTGG+TGG + chr7_4:27762918-27762937 Msa1148000:intron 45.0%
CGGACGAGAGCAATAATTGA+GGG + chr7_4:27763072-27763091 Msa1148000:intron 45.0%
!! GTGTTGTTTAAGTGAGGAGG+TGG + chr7_4:27763101-27763120 Msa1148000:intron 45.0%
! TGTTGGTTGGGGTGTTTGTT+AGG + chr7_4:27763125-27763144 Msa1148000:intron 45.0%
! GTTGGTTGGGGTGTTTGTTA+GGG + chr7_4:27763126-27763145 Msa1148000:intron 45.0%
!! CTCTCTTTGTGCTTTTTGGG+TGG + chr7_4:27763203-27763222 Msa1148000:intron 45.0%
TAGGTGTTTACGGAGTTTGG+AGG + chr7_4:27763228-27763247 Msa1148000:intron 45.0%
AGGTGTTTACGGAGTTTGGA+GGG + chr7_4:27763229-27763248 Msa1148000:intron 45.0%
!!! TGTGTTGATTTTCGATGGGC+CGG + chr7_4:27763337-27763356 Msa1148000:intron 45.0%
GATCTCGAAGCCAAATGAAC+CGG - chr7_4:27763359-27763378 None:intergenic 45.0%
! GGTTCATTTGGCTTCGAGAT+CGG + chr7_4:27763358-27763377 Msa1148000:intron 45.0%
! GTTCATTTGGCTTCGAGATC+GGG + chr7_4:27763359-27763378 Msa1148000:intron 45.0%
GCTGCAATCGTTGTTTGACT+TGG + chr7_4:27763394-27763413 Msa1148000:intron 45.0%
! GTTTTTCTCTGGTGTACCGA+GGG + chr7_4:27763421-27763440 Msa1148000:intron 45.0%
! GGCTTTGTGTTGTGCTCTTT+CGG + chr7_4:27763540-27763559 Msa1148000:intron 45.0%
TTTGTGTTGTGCTCTTTCGG+TGG + chr7_4:27763543-27763562 Msa1148000:intron 45.0%
GTGATAGCTGCATGATCCTT+CGG + chr7_4:27763585-27763604 Msa1148000:intron 45.0%
!! TTCAAAGAGCACCTAACCGA+AGG - chr7_4:27763604-27763623 None:intergenic 45.0%
!! CTTTGAAATGTGGCTCAGCT+TGG + chr7_4:27763617-27763636 Msa1148000:CDS 45.0%
!!! ATTTTGAGGGTGTTCTTCGG+GGG + chr7_4:27763661-27763680 Msa1148000:CDS 45.0%
!!! TATCTCCAGGGGTGTTTTAG+GGG + chr7_4:27763775-27763794 Msa1148000:intron 45.0%
!! CAAATGGTGCCGCATATAGA+CGG - chr7_4:27763812-27763831 None:intergenic 45.0%
ACGCAAGGTATGGACGAAAA+AGG - chr7_4:27763837-27763856 None:intergenic 45.0%
CATGGCAGCTTGATTCTTAG+CGG - chr7_4:27763962-27763981 None:intergenic 45.0%
AACCCAGAAAACACCGTCTT+TGG + chr7_4:27763982-27764001 Msa1148000:CDS 45.0%
TTTAGGCAGTGCCTATCCAA+AGG + chr7_4:27764146-27764165 Msa1148000:intron 45.0%
GGTTGGATGGCCTAAAGTTA+GGG - chr7_4:27764186-27764205 None:intergenic 45.0%
TGGTTGGATGGCCTAAAGTT+AGG - chr7_4:27764187-27764206 None:intergenic 45.0%
!!! CAGTTTTTTGTCTGCACACG+AGG - chr7_4:27764247-27764266 None:intergenic 45.0%
!! TATTGGCCTGCCCTGTTTTT+AGG + chr7_4:27764316-27764335 Msa1148000:intron 45.0%
TTCCCTCAAATACAAGGGAC+GGG + chr7_4:27764676-27764695 Msa1148000:CDS 45.0%
! GGAGAAACACTTTTGTGCTG+AGG + chr7_4:27764697-27764716 Msa1148000:CDS 45.0%
AAAGATGCGAGAGATTGCAG+AGG + chr7_4:27764742-27764761 Msa1148000:CDS 45.0%
GAATGCTGTCATTACTGTGC+CGG + chr7_4:27764787-27764806 Msa1148000:CDS 45.0%
CGAAAAGCCACAATAGATGC+TGG + chr7_4:27764830-27764849 Msa1148000:CDS 45.0%
!! ATAGATGCTGGTGTCATTGC+TGG + chr7_4:27764842-27764861 Msa1148000:CDS 45.0%
AGTTCTCTTGTCAAGGCCAT+AGG - chr7_4:27764915-27764934 None:intergenic 45.0%
TTTGTCTTTGACCTTGGTGG+TGG + chr7_4:27764959-27764978 Msa1148000:CDS 45.0%
! TTGTCTTTGACCTTGGTGGT+GGG + chr7_4:27764960-27764979 Msa1148000:CDS 45.0%
TTGGGAACCCAAAAGCCTTA+AGG + chr7_4:27765134-27765153 Msa1148000:CDS 45.0%
! CTCAACCTCCTTAAGGCTTT+TGG - chr7_4:27765145-27765164 None:intergenic 45.0%
TGCAGTTCTCAACCTCCTTA+AGG - chr7_4:27765152-27765171 None:intergenic 45.0%
TACCTCAACATTGGTCACAG+AGG - chr7_4:27765206-27765225 None:intergenic 45.0%
AATCACTCGTGCCAAGTTTG+AGG + chr7_4:27765261-27765280 Msa1148000:CDS 45.0%
!! GTTGATGACGTTGTCCTTGT+TGG + chr7_4:27765364-27765383 Msa1148000:CDS 45.0%
! TCCTTGTTGGTGGATCTTCT+AGG + chr7_4:27765377-27765396 Msa1148000:CDS 45.0%
TCCTAGAAGATCCACCAACA+AGG - chr7_4:27765381-27765400 None:intergenic 45.0%
!! CAAGAGTATCAACCCTGATG+AGG + chr7_4:27765453-27765472 Msa1148000:CDS 45.0%
CATAAGCAACAGCCTCATCA+GGG - chr7_4:27765468-27765487 None:intergenic 45.0%
GTCTCGATTGAGGTCTATGA+GGG + chr7_4:27765682-27765701 Msa1148000:CDS 45.0%
ACCAAGGAGATGATTGTCAC+TGG - chr7_4:27765722-27765741 None:intergenic 45.0%
GAACAAGGGGTAAACCTGAA+AGG - chr7_4:27765753-27765772 None:intergenic 45.0%
ATCATCGATACGGTAAGCCT+TGG - chr7_4:27765935-27765954 None:intergenic 45.0%
GGCGAAAGTAATGAATGCAC+TGG + chr7_4:27765972-27765991 Msa1148000:CDS 45.0%
!!! ATCTAATAAAAAATATTTTT+TGG - chr7_4:27764207-27764226 None:intergenic 5.0%
!! AGGGAGGATGTGTTGGTTTC+GGG - chr7_4:27762065-27762084 None:intergenic 50.0%
GAGAAGAAGGGAGGATGTGT+TGG - chr7_4:27762072-27762091 None:intergenic 50.0%
! AACGGTTTGGAGAAGAAGGG+AGG - chr7_4:27762081-27762100 None:intergenic 50.0%
! GAGGAACGGTTTGGAGAAGA+AGG - chr7_4:27762085-27762104 None:intergenic 50.0%
TACATCGGAGAGGAACGGTT+TGG - chr7_4:27762094-27762113 None:intergenic 50.0%
! CCTTTTAACCCTCTCTGGGT+CGG + chr7_4:27762164-27762183 Msa1148000:CDS 50.0%
TGAAGAAACCGACCCAGAGA+GGG - chr7_4:27762175-27762194 None:intergenic 50.0%
ATGAAGAAACCGACCCAGAG+AGG - chr7_4:27762176-27762195 None:intergenic 50.0%
! CAGCTTCAATCTGGTTTCGC+TGG + chr7_4:27762196-27762215 Msa1148000:CDS 50.0%
AGAGGAGCTCATGAGGATCT+GGG - chr7_4:27762228-27762247 None:intergenic 50.0%
! GGTTGTTTGCGTTTCTAGGC+TGG + chr7_4:27762301-27762320 Msa1148000:intron 50.0%
! GTTTCTAGGCTGGATCTGCT+TGG + chr7_4:27762311-27762330 Msa1148000:intron 50.0%
! CTTGCGATCTATTGGTGGGT+AGG + chr7_4:27762336-27762355 Msa1148000:intron 50.0%
!!! TAGGGCTGGTTCTTTTGTGG+TGG + chr7_4:27762355-27762374 Msa1148000:intron 50.0%
! TGTTGGTGGGTCGTAGTTGT+AGG + chr7_4:27762378-27762397 Msa1148000:intron 50.0%
TCGTAGTTGTAGGCTGATGG+TGG + chr7_4:27762388-27762407 Msa1148000:intron 50.0%
!!! GCTGATGGTGGTTTTGTTGG+TGG + chr7_4:27762400-27762419 Msa1148000:CDS 50.0%
!! GTTGGTGGATTGGTTTCACG+TGG + chr7_4:27762415-27762434 Msa1148000:CDS 50.0%
GAAGGAAGAGAGGCGATATC+TGG - chr7_4:27762568-27762587 None:intergenic 50.0%
!! CTTGTTGTTGTGGTGGCTGT+TGG + chr7_4:27762608-27762627 Msa1148000:CDS 50.0%
CAGCTAAACAGTCACCGATC+TGG - chr7_4:27762695-27762714 None:intergenic 50.0%
CAGATCGGTGACTGTTTAGC+TGG + chr7_4:27762693-27762712 Msa1148000:intron 50.0%
ATCCTCCTTCAACGCAACTC+CGG + chr7_4:27762795-27762814 Msa1148000:CDS 50.0%
CCTTACGACAACGAACGATC+CGG - chr7_4:27762817-27762836 None:intergenic 50.0%
GTTCGTTGTCGTAAGGATCG+TGG + chr7_4:27762821-27762840 Msa1148000:CDS 50.0%
AAAGGAAGCTACACAGCCAC+CGG - chr7_4:27762884-27762903 None:intergenic 50.0%
!!! CTTGGTGGTGTTTTCGGTTG+AGG + chr7_4:27762958-27762977 Msa1148000:CDS 50.0%
!! TTGTCTTGGTGTGGGTTGGA+TGG + chr7_4:27763002-27763021 Msa1148000:CDS 50.0%
GCGGACGAGAGCAATAATTG+AGG + chr7_4:27763071-27763090 Msa1148000:intron 50.0%
TTAAGTGAGGAGGTGGGTGT+TGG + chr7_4:27763108-27763127 Msa1148000:intron 50.0%
AGAGCTAGAGACGACGAACA+TGG - chr7_4:27763187-27763206 None:intergenic 50.0%
! TTTCGATGGGCCGGTTCATT+TGG + chr7_4:27763346-27763365 Msa1148000:intron 50.0%
! GGTTTTTCTCTGGTGTACCG+AGG + chr7_4:27763420-27763439 Msa1148000:intron 50.0%
GTTGTGCTCTTTCGGTGGAT+CGG + chr7_4:27763548-27763567 Msa1148000:intron 50.0%
AGCTGCATGATCCTTCGGTT+AGG + chr7_4:27763590-27763609 Msa1148000:intron 50.0%
TGAGTAGTGACGACGAACGA+TGG + chr7_4:27763684-27763703 Msa1148000:intron 50.0%
!!! ATCTCCAGGGGTGTTTTAGG+GGG + chr7_4:27763776-27763795 Msa1148000:intron 50.0%
ATAACCCCCTAAAACACCCC+TGG - chr7_4:27763783-27763802 None:intergenic 50.0%
!!! AGGGGTGTTTTAGGGGGTTA+TGG + chr7_4:27763782-27763801 Msa1148000:intron 50.0%
! GACGGTGTTTTCTGGGTTCA+TGG - chr7_4:27763980-27763999 None:intergenic 50.0%
GTGGCCATTCAAGGTCATTG+CGG + chr7_4:27764631-27764650 Msa1148000:CDS 50.0%
TGGCCATTCAAGGTCATTGC+GGG + chr7_4:27764632-27764651 Msa1148000:CDS 50.0%
ACTCCCGCAATGACCTTGAA+TGG - chr7_4:27764638-27764657 None:intergenic 50.0%
CTCCCGTCCCTTGTATTTGA+GGG - chr7_4:27764681-27764700 None:intergenic 50.0%
TCTCCCGTCCCTTGTATTTG+AGG - chr7_4:27764682-27764701 None:intergenic 50.0%
TAGGCAATAGCTGCAGCAGT+TGG - chr7_4:27764896-27764915 None:intergenic 50.0%
ACTGCTGCAGCTATTGCCTA+TGG + chr7_4:27764896-27764915 Msa1148000:CDS 50.0%
CATCAAAAGTCCCACCACCA+AGG - chr7_4:27764973-27764992 None:intergenic 50.0%
GTCTTCGAAGTTAAGGCCAC+CGG + chr7_4:27765019-27765038 Msa1148000:CDS 50.0%
TCCAAGATGAGTGTCTCCAC+CGG - chr7_4:27765041-27765060 None:intergenic 50.0%
AGACACTCATCTTGGAGGAG+AGG + chr7_4:27765045-27765064 Msa1148000:CDS 50.0%
GGAACCCAAAAGCCTTAAGG+AGG + chr7_4:27765137-27765156 Msa1148000:CDS 50.0%
TGCCTCTGTGACCAATGTTG+AGG + chr7_4:27765201-27765220 Msa1148000:CDS 50.0%
GATGACGTTGTCCTTGTTGG+TGG + chr7_4:27765367-27765386 Msa1148000:CDS 50.0%
GCAGAACTTCTTCAAGGGGA+AGG + chr7_4:27765423-27765442 Msa1148000:CDS 50.0%
CCATAAGCAACAGCCTCATC+AGG - chr7_4:27765469-27765488 None:intergenic 50.0%
! CCTGATGAGGCTGTTGCTTA+TGG + chr7_4:27765466-27765485 Msa1148000:CDS 50.0%
CGTCCGGAATGTTCCAAACT+TGG + chr7_4:27765522-27765541 Msa1148000:CDS 50.0%
ACCTTCCAACCTAGAGACAG+CGG - chr7_4:27765565-27765584 None:intergenic 50.0%
CCTCAATCGAGACCACTGAT+TGG - chr7_4:27765675-27765694 None:intergenic 50.0%
CCAATCAGTGGTCTCGATTG+AGG + chr7_4:27765672-27765691 Msa1148000:CDS 50.0%
GGTCTCGATTGAGGTCTATG+AGG + chr7_4:27765681-27765700 Msa1148000:CDS 50.0%
GCCAGTGACAATCATCTCCT+TGG + chr7_4:27765718-27765737 Msa1148000:CDS 50.0%
CGACAGCCTTCCTTTGTCTT+TGG - chr7_4:27765881-27765900 None:intergenic 50.0%
CCACCGGAATTACATCGGAG+AGG - chr7_4:27762104-27762123 None:intergenic 55.0%
CCTCTCCGATGTAATTCCGG+TGG + chr7_4:27762101-27762120 Msa1148000:CDS 55.0%
CTCCGATGTAATTCCGGTGG+CGG + chr7_4:27762104-27762123 Msa1148000:CDS 55.0%
CACCGCCACCGGAATTACAT+CGG - chr7_4:27762109-27762128 None:intergenic 55.0%
CCGACCCAGAGAGGGTTAAA+AGG - chr7_4:27762167-27762186 None:intergenic 55.0%
GAGAGGAGCTCATGAGGATC+TGG - chr7_4:27762229-27762248 None:intergenic 55.0%
AACTGGGAGAGGAGCTCATG+AGG - chr7_4:27762235-27762254 None:intergenic 55.0%
GCTCCTCTCCCAGTTTCTCT+TGG + chr7_4:27762240-27762259 Msa1148000:CDS 55.0%
! GCTGGGATTGGTGTTCGATC+TGG + chr7_4:27762274-27762293 Msa1148000:CDS 55.0%
! GATCTATTGGTGGGTAGGGC+TGG + chr7_4:27762341-27762360 Msa1148000:intron 55.0%
!!! GGGTAGGGCTGGTTCTTTTG+TGG + chr7_4:27762352-27762371 Msa1148000:intron 55.0%
GGGTCGTAGTTGTAGGCTGA+TGG + chr7_4:27762385-27762404 Msa1148000:intron 55.0%
!! GGTGGATTGGTTTCACGTGG+TGG + chr7_4:27762418-27762437 Msa1148000:CDS 55.0%
CTTCTTCAGCCTCTCCAGGT+CGG + chr7_4:27762470-27762489 Msa1148000:intron 55.0%
AACCACAAACCGACCTGGAG+AGG - chr7_4:27762482-27762501 None:intergenic 55.0%
CACACAACCACAAACCGACC+TGG - chr7_4:27762487-27762506 None:intergenic 55.0%
GTTGTTGTGGTGGCTGTTGG+TGG + chr7_4:27762611-27762630 Msa1148000:CDS 55.0%
CAACACCCCTTTCCTCGTTG+AGG + chr7_4:27762658-27762677 Msa1148000:CDS 55.0%
GGCTACGACTGCTCCATATC+CGG + chr7_4:27762733-27762752 Msa1148000:intron 55.0%
TACGACTGCTCCATATCCGG+CGG + chr7_4:27762736-27762755 Msa1148000:intron 55.0%
ATATCCGGCGGCTATAGGTG+CGG + chr7_4:27762748-27762767 Msa1148000:intron 55.0%
ATCCGGAGTTGCGTTGAAGG+AGG - chr7_4:27762800-27762819 None:intergenic 55.0%
ACGATCCGGAGTTGCGTTGA+AGG - chr7_4:27762803-27762822 None:intergenic 55.0%
CCGGATCGTTCGTTGTCGTA+AGG + chr7_4:27762814-27762833 Msa1148000:CDS 55.0%
CGTAAGGATCGTGGTGCTTG+TGG + chr7_4:27762830-27762849 Msa1148000:CDS 55.0%
CTTGTGGCTGTTCGTACCAG+TGG + chr7_4:27762846-27762865 Msa1148000:intron 55.0%
GCTGTTCGTACCAGTGGTGA+CGG + chr7_4:27762852-27762871 Msa1148000:intron 55.0%
!! TTCGTACCAGTGGTGACGGT+GGG + chr7_4:27762856-27762875 Msa1148000:intron 55.0%
! ATTTGGTGGCAGACCCTCTC+CGG + chr7_4:27762932-27762951 Msa1148000:intron 55.0%
CGAAAACACCACCAAGACCC+CGG - chr7_4:27762954-27762973 None:intergenic 55.0%
!!! CGGGGTCTTGGTGGTGTTTT+CGG + chr7_4:27762952-27762971 Msa1148000:CDS 55.0%
! GGTGGTGTTTTCGGTTGAGG+TGG + chr7_4:27762961-27762980 Msa1148000:CDS 55.0%
! GGTGTTTTCGGTTGAGGTGG+TGG + chr7_4:27762964-27762983 Msa1148000:CDS 55.0%
! AGGTGGTGGTGACTTTGCGT+GGG + chr7_4:27762978-27762997 Msa1148000:CDS 55.0%
GACTTTGCGTGGGGTTGTCT+TGG + chr7_4:27762988-27763007 Msa1148000:CDS 55.0%
!! CTTGGTGTGGGTTGGATGGA+TGG + chr7_4:27763006-27763025 Msa1148000:CDS 55.0%
!! TGAGGAGGTGGGTGTTGGTT+GGG + chr7_4:27763113-27763132 Msa1148000:intron 55.0%
TTGGCTTCGAGATCGGGAGT+CGG + chr7_4:27763365-27763384 Msa1148000:intron 55.0%
ATGTGGCTCAGCTTGGACGT+CGG + chr7_4:27763624-27763643 Msa1148000:CDS 55.0%
CGTCCATACCTTGCGTCTTG+CGG + chr7_4:27763841-27763860 Msa1148000:intron 55.0%
GTCCATACCTTGCGTCTTGC+GGG + chr7_4:27763842-27763861 Msa1148000:intron 55.0%
TCCATACCTTGCGTCTTGCG+GGG + chr7_4:27763843-27763862 Msa1148000:intron 55.0%
TTCGAAGTTAAGGCCACCGG+TGG + chr7_4:27765022-27765041 Msa1148000:CDS 55.0%
AAGATGAGTGTCTCCACCGG+TGG - chr7_4:27765038-27765057 None:intergenic 55.0%
ACCGGTGGAGACACTCATCT+TGG + chr7_4:27765037-27765056 Msa1148000:CDS 55.0%
GGTGGAGACACTCATCTTGG+AGG + chr7_4:27765040-27765059 Msa1148000:CDS 55.0%
!! TGCTTATGGTGCTGCTGTCC+AGG + chr7_4:27765480-27765499 Msa1148000:CDS 55.0%
! GTCCAGGCTGCTTTGTTGAG+TGG + chr7_4:27765496-27765515 Msa1148000:CDS 55.0%
CTCCACTCAACAAAGCAGCC+TGG - chr7_4:27765501-27765520 None:intergenic 55.0%
! CAGGCTGCTTTGTTGAGTGG+AGG + chr7_4:27765499-27765518 Msa1148000:CDS 55.0%
!! CTTTGTTGAGTGGAGGCGTC+CGG + chr7_4:27765506-27765525 Msa1148000:CDS 55.0%
GATGTTGCACCGCTGTCTCT+AGG + chr7_4:27765553-27765572 Msa1148000:CDS 55.0%
TTGCACCGCTGTCTCTAGGT+TGG + chr7_4:27765557-27765576 Msa1148000:CDS 55.0%
! ACCGCTGTCTCTAGGTTGGA+AGG + chr7_4:27765561-27765580 Msa1148000:CDS 55.0%
GGTTTACCCCTTGTTCCTCG+CGG + chr7_4:27765757-27765776 Msa1148000:CDS 55.0%
ACATCAAAAGGATGGCCGCG+AGG - chr7_4:27765775-27765794 None:intergenic 55.0%
! CGATGTAATTCCGGTGGCGG+TGG + chr7_4:27762107-27762126 Msa1148000:CDS 60.0%
CAAGAAGGTGGTGCGGAGGA+AGG - chr7_4:27762144-27762163 None:intergenic 60.0%
AAGGCAAGAAGGTGGTGCGG+AGG - chr7_4:27762148-27762167 None:intergenic 60.0%
CCTGGAGAGGCTGAAGAAGG+TGG - chr7_4:27762469-27762488 None:intergenic 60.0%
CCACCTTCTTCAGCCTCTCC+AGG + chr7_4:27762466-27762485 Msa1148000:CDS 60.0%
CGACCTGGAGAGGCTGAAGA+AGG - chr7_4:27762472-27762491 None:intergenic 60.0%
!! AGCCTCTCCAGGTCGGTTTG+TGG + chr7_4:27762477-27762496 Msa1148000:intron 60.0%
!! GTGGCTGTTGGTGGTGCGAT+GGG + chr7_4:27762620-27762639 Msa1148000:CDS 60.0%
!! CGAGGAAAGGGGTGTTGCAG+AGG - chr7_4:27762655-27762674 None:intergenic 60.0%
GCTCCATATCCGGCGGCTAT+AGG + chr7_4:27762743-27762762 Msa1148000:intron 60.0%
GCACCTATAGCCGCCGGATA+TGG - chr7_4:27762749-27762768 None:intergenic 60.0%
!! GTTCGTACCAGTGGTGACGG+TGG + chr7_4:27762855-27762874 Msa1148000:intron 60.0%
! TTTGGTGGCAGACCCTCTCC+GGG + chr7_4:27762933-27762952 Msa1148000:intron 60.0%
! GAGGTGGTGGTGACTTTGCG+TGG + chr7_4:27762977-27762996 Msa1148000:CDS 60.0%
! GGTGGTGGTGACTTTGCGTG+GGG + chr7_4:27762979-27762998 Msa1148000:CDS 60.0%
TGCGTGGGGTTGTCTTGGTG+TGG + chr7_4:27762993-27763012 Msa1148000:CDS 60.0%
! GCGTGGGGTTGTCTTGGTGT+GGG + chr7_4:27762994-27763013 Msa1148000:CDS 60.0%
! GGGGTTGTCTTGGTGTGGGT+TGG + chr7_4:27762998-27763017 Msa1148000:CDS 60.0%
!! GTGAGGAGGTGGGTGTTGGT+TGG + chr7_4:27763112-27763131 Msa1148000:intron 60.0%
!! GAGGAGGTGGGTGTTGGTTG+GGG + chr7_4:27763114-27763133 Msa1148000:intron 60.0%
TGGCTTCGAGATCGGGAGTC+GGG + chr7_4:27763366-27763385 Msa1148000:intron 60.0%
GTGCTCTTTCGGTGGATCGG+AGG + chr7_4:27763551-27763570 Msa1148000:intron 60.0%
TGTGGCTCAGCTTGGACGTC+GGG + chr7_4:27763625-27763644 Msa1148000:CDS 60.0%
TCAGCTTGGACGTCGGGGTT+TGG + chr7_4:27763631-27763650 Msa1148000:CDS 60.0%
CAGCTTGGACGTCGGGGTTT+GGG + chr7_4:27763632-27763651 Msa1148000:CDS 60.0%
TCCCCGCAAGACGCAAGGTA+TGG - chr7_4:27763847-27763866 None:intergenic 60.0%
AGGATGGCCGCGAGGAACAA+GGG - chr7_4:27765767-27765786 None:intergenic 60.0%
AAGGATGGCCGCGAGGAACA+AGG - chr7_4:27765768-27765787 None:intergenic 60.0%
!! GGTGGCTGTTGGTGGTGCGA+TGG + chr7_4:27762619-27762638 Msa1148000:CDS 65.0%
!! GCTGTTGGTGGTGCGATGGG+TGG + chr7_4:27762623-27762642 Msa1148000:CDS 65.0%
TCTGCCGCACCTATAGCCGC+CGG - chr7_4:27762755-27762774 None:intergenic 65.0%
! TTGGTGGCAGACCCTCTCCG+GGG + chr7_4:27762934-27762953 Msa1148000:intron 65.0%
CACCACCAAGACCCCGGAGA+GGG - chr7_4:27762948-27762967 None:intergenic 65.0%
ACACCACCAAGACCCCGGAG+AGG - chr7_4:27762949-27762968 None:intergenic 65.0%
GGCTTCGAGATCGGGAGTCG+GGG + chr7_4:27763367-27763386 Msa1148000:intron 65.0%
TCTCTGGTGTACCGAGGGCG+AGG + chr7_4:27763426-27763445 Msa1148000:intron 65.0%
CTCTGGTGTACCGAGGGCGA+GGG + chr7_4:27763427-27763446 Msa1148000:intron 65.0%
TCTGGTGTACCGAGGGCGAG+GGG + chr7_4:27763428-27763447 Msa1148000:intron 65.0%
GTGGCTCAGCTTGGACGTCG+GGG + chr7_4:27763626-27763645 Msa1148000:CDS 65.0%
CGTCATCCCCGCAAGACGCA+AGG - chr7_4:27763852-27763871 None:intergenic 65.0%
GGATGGCCGCGAGGAACAAG+GGG - chr7_4:27765766-27765785 None:intergenic 65.0%
CCTCATCGCACCACCGCCAC+CGG - chr7_4:27762120-27762139 None:intergenic 70.0%
!! CCAGTGGTGACGGTGGGAGC+CGG + chr7_4:27762862-27762881 Msa1148000:intron 70.0%
GCAGACCCTCTCCGGGGTCT+TGG + chr7_4:27762940-27762959 Msa1148000:intron 70.0%
GACCCTCTCCGGGGTCTTGG+TGG + chr7_4:27762943-27762962 Msa1148000:intron 70.0%
TCGGTGGATCGGAGGTCGCG+AGG + chr7_4:27763559-27763578 Msa1148000:intron 70.0%
! CCGGTGGCGGTGGTGCGATG+AGG + chr7_4:27762117-27762136 Msa1148000:CDS 75.0%
CCGGCTCCCACCGTCACCAC+TGG - chr7_4:27762865-27762884 None:intergenic 75.0%
!! GTGGTGACGGTGGGAGCCGG+TGG + chr7_4:27762865-27762884 Msa1148000:intron 75.0%
! AGCAGGGCACCCCTCGCCCT+CGG - chr7_4:27763440-27763459 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 27761872 27766239 27761872 ID=Msa1148000;Name=Msa1148000
chr7_4 mRNA 27761872 27766239 27761872 ID=Msa1148000-mRNA-1;Parent=Msa1148000;Name=Msa1148000-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0|0|0|0.2|1|1|10|0|868
chr7_4 exon 27761872 27761961 27761872 ID=Msa1148000-mRNA-1:exon:6767;Parent=Msa1148000-mRNA-1
chr7_4 exon 27762056 27762295 27762056 ID=Msa1148000-mRNA-1:exon:6768;Parent=Msa1148000-mRNA-1
chr7_4 exon 27762400 27762487 27762400 ID=Msa1148000-mRNA-1:exon:6769;Parent=Msa1148000-mRNA-1
chr7_4 exon 27762558 27762679 27762558 ID=Msa1148000-mRNA-1:exon:6770;Parent=Msa1148000-mRNA-1
chr7_4 exon 27762765 27762854 27762765 ID=Msa1148000-mRNA-1:exon:6771;Parent=Msa1148000-mRNA-1
chr7_4 exon 27762944 27763066 27762944 ID=Msa1148000-mRNA-1:exon:6772;Parent=Msa1148000-mRNA-1
chr7_4 exon 27763612 27763682 27763612 ID=Msa1148000-mRNA-1:exon:6773;Parent=Msa1148000-mRNA-1
chr7_4 exon 27763784 27763830 27763784 ID=Msa1148000-mRNA-1:exon:6774;Parent=Msa1148000-mRNA-1
chr7_4 exon 27763938 27764003 27763938 ID=Msa1148000-mRNA-1:exon:6775;Parent=Msa1148000-mRNA-1
chr7_4 exon 27764570 27766239 27764570 ID=Msa1148000-mRNA-1:exon:6776;Parent=Msa1148000-mRNA-1
chr7_4 CDS 27761872 27761961 27761872 ID=Msa1148000-mRNA-1:cds;Parent=Msa1148000-mRNA-1
chr7_4 CDS 27762056 27762295 27762056 ID=Msa1148000-mRNA-1:cds;Parent=Msa1148000-mRNA-1
chr7_4 CDS 27762400 27762487 27762400 ID=Msa1148000-mRNA-1:cds;Parent=Msa1148000-mRNA-1
chr7_4 CDS 27762558 27762679 27762558 ID=Msa1148000-mRNA-1:cds;Parent=Msa1148000-mRNA-1
chr7_4 CDS 27762765 27762854 27762765 ID=Msa1148000-mRNA-1:cds;Parent=Msa1148000-mRNA-1
chr7_4 CDS 27762944 27763066 27762944 ID=Msa1148000-mRNA-1:cds;Parent=Msa1148000-mRNA-1
chr7_4 CDS 27763612 27763682 27763612 ID=Msa1148000-mRNA-1:cds;Parent=Msa1148000-mRNA-1
chr7_4 CDS 27763784 27763830 27763784 ID=Msa1148000-mRNA-1:cds;Parent=Msa1148000-mRNA-1
chr7_4 CDS 27763938 27764003 27763938 ID=Msa1148000-mRNA-1:cds;Parent=Msa1148000-mRNA-1
chr7_4 CDS 27764570 27766239 27764570 ID=Msa1148000-mRNA-1:cds;Parent=Msa1148000-mRNA-1
Gene Sequence

>Msa1148000

ATGGCAAAAAATAAAGAAGGATGTGCCATTGGAATAGACCTTGGTACAACGTACTCTTGTGTTGCTGTATGGCATGAAGAACTTGGTAGATTTTTTCCCGAAACCAACACATCCTCCCTTCTTCTCCAAACCGTTCCTCTCCGATGTAATTCCGGTGGCGGTGGTGCGATGAGGTCCTTCCTCCGCACCACCTTCTTGCCTTTTAACCCTCTCTGGGTCGGTTTCTTCATCAGCTTCAATCTGGTTTCGCTGGTTCTTTCCCAGATCCTCATGAGCTCCTCTCCCAGTTTCTCTTGGTTTCACGTTTTGCTGGGATTGGTGTTCGATCTGGCTGATGGTGGTTTTGTTGGTGGATTGGTTTCACGTGGTGGTTTTGTTGTTGTTGGTGGTGTGACACCACCTTCTTCAGCCTCTCCAGTTTGGATCCAGATATCGCCTCTCTTCCTTCCTTATCCAACCTTATTGTTTCTTGTTGTTGTGGTGGCTGTTGGTGGTGCGATGGGTGGCTTTGTCCTCTGCAACACCCCTTTCCTCGTTGAGGTGCGGCAGAATCTCTTTCATCCACGATTAATCCTCCTTCAACGCAACTCCGGATCGTTCGTTGTCGTAAGGATCGTGGTGCTTGTGGCTACCCTCTCCGGGGTCTTGGTGGTGTTTTCGGTTGAGGTGGTGGTGACTTTGCGTGGGGTTGTCTTGGTGTGGGTTGGATGGATGGTCGTCGATTTTTTTGGACTTGGATTTGGTGTCAAAACGGTGCTCTTTGAAATGTGGCTCAGCTTGGACGTCGGGGTTTGGGAGTTTTATTTTGAGGGTGTTCTTCGGGGGGGTGTTTTAGGGGGTTATGGTGTACCGTCTATATGCGGCACCATTTATGAAAGGTTGATCGGTGATGCCGCTAAGAATCAAGCTGCCATGAACCCAGAAAACACCGTCTTTGATGCTAAGAGACTAATTGGTAGGAAGTTTAGTGATCCTGTGGTCCAAAAAGATATAATGTCGTGGCCATTCAAGGTCATTGCGGGAGTGAATGACAAACCAATGATTTCCCTCAAATACAAGGGACGGGAGAAACACTTTTGTGCTGAGGAAATTTCGTCTATGGTACTCACAAAGATGCGAGAGATTGCAGAGGAATATCTAGAATCATCGGTTAAGAATGCTGTCATTACTGTGCCGGCTTACTTCAATGATTCTCAGCGAAAAGCCACAATAGATGCTGGTGTCATTGCTGGCCTTAATGTATTGAAGGTAATCAATGAACCAACTGCTGCAGCTATTGCCTATGGCCTTGACAAGAGAACTAACTGTGTGGAAGAACGGAATATTTTTGTCTTTGACCTTGGTGGTGGGACTTTTGATGTATCTCTCGTTACAATTAAGGATAAGGTCTTCGAAGTTAAGGCCACCGGTGGAGACACTCATCTTGGAGGAGAGGACTTTGATAATAGAATGGTGTACTATTTTGTAGAGGAGATCAAAAGGAAGAAAAAATTGAAAATTGTTGGGAACCCAAAAGCCTTAAGGAGGTTGAGAACTGCATGTGAAAAAGCAAAAAGGACACTTTCTTTTGCCTCTGTGACCAATGTTGAGGTAGACGCTTTATTTAAGGGTGTTGATTTTTCTTCATCAATCACTCGTGCCAAGTTTGAGGAAATCAATATGGACCTTTTTGATGAGTGCATGAAGATTGTTGAGAAGTGTCTAACTGATGCCAAGATTGACAAGAGCAGAGTTGATGACGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCGAAAGTGCAGCAACTATTGCAGAACTTCTTCAAGGGGAAGGAATTATGCAAGAGTATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTCCAGGCTGCTTTGTTGAGTGGAGGCGTCCGGAATGTTCCAAACTTGGTGTTGATTGATGTTGCACCGCTGTCTCTAGGTTGGAAGGTAATACATGGTGTCATGAATGTGGTGATTCCTAGGAATACTTCGATTCCAGTCAAGAAGACAAGAAAATATGCTACAATCAAAGATAACCAATCAGTGGTCTCGATTGAGGTCTATGAGGGTGAGAGAACAAGAGCCAGTGACAATCATCTCCTTGGTTCTTTCTTCCTTTCAGGTTTACCCCTTGTTCCTCGCGGCCATCCTTTTGATGTATGCTTTGATGTCGATCAAAATGGCATTTTGACAGTTTCTGCTATGGATAAATCCACTGGCAGTAAGAATGAGATTACAATAACCAAAGACAAAGGAAGGCTGTCGACTGAAGAAATTAATAGATTGATTAAAGAAGCCAAGGCTTACCGTATCGATGATGAGAAATTCTTAAGAAAGGCGAAAGTAATGAATGCACTGGACCAGTGTGTTTACAAAATGGAAAATTTGTTGAAGAAGAAGGATATTAGTGTGAAGCTCTCTTCAGAAGAAAACAAGAAGATGAATGCTGCAATTAAAAAGGCCACAAAATTGCTTGATGAGAATGACCGTCAAAATGAAAGTGATGTTCTTCAGGATCACTTGAATGAGCTTGAGAGTATGTATGAGCGCATTAACTCTATTTTAAGTCCTACTAGGTTTTTATGTTCTCACTTGATATTTTAA
Protein sequence

>Msa1148000

MAKNKEGCAIGIDLGTTYSCVAVWHEELGRFFPETNTSSLLLQTVPLRCNSGGGGAMRSFLRTTFLPFNPLWVGFFISFNLVSLVLSQILMSSSPSFSWFHVLLGLVFDLADGGFVGGLVSRGGFVVVGGVTPPSSASPVWIQISPLFLPYPTLLFLVVVVAVGGAMGGFVLCNTPFLVEVRQNLFHPRLILLQRNSGSFVVVRIVVLVATLSGVLVVFSVEVVVTLRGVVLVWVGWMVVDFFGLGFGVKTVLFEMWLSLDVGVWEFYFEGVLRGGVLGGYGVPSICGTIYERLIGDAAKNQAAMNPENTVFDAKRLIGRKFSDPVVQKDIMSWPFKVIAGVNDKPMISLKYKGREKHFCAEEISSMVLTKMREIAEEYLESSVKNAVITVPAYFNDSQRKATIDAGVIAGLNVLKVINEPTAAAIAYGLDKRTNCVEERNIFVFDLGGGTFDVSLVTIKDKVFEVKATGGDTHLGGEDFDNRMVYYFVEEIKRKKKLKIVGNPKALRRLRTACEKAKRTLSFASVTNVEVDALFKGVDFSSSITRAKFEEINMDLFDECMKIVEKCLTDAKIDKSRVDDVVLVGGSSRIPKVQQLLQNFFKGKELCKSINPDEAVAYGAAVQAALLSGGVRNVPNLVLIDVAPLSLGWKVIHGVMNVVIPRNTSIPVKKTRKYATIKDNQSVVSIEVYEGERTRASDNHLLGSFFLSGLPLVPRGHPFDVCFDVDQNGILTVSAMDKSTGSKNEITITKDKGRLSTEEINRLIKEAKAYRIDDEKFLRKAKVMNALDQCVYKMENLLKKKDISVKLSSEENKKMNAAIKKATKLLDENDRQNESDVLQDHLNELESMYERINSILSPTRFLCSHLIF*