AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0641510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0641510 MtrunA17_Chr4g0026141 97.368 190 5 0 3 192 72 261 3.79e-138 386
Msa0641510 MtrunA17_Chr2g0321631 57.513 193 60 6 4 191 73 248 2.19e-66 204
Msa0641510 MtrunA17_Chr7g0266701 44.221 199 80 7 4 191 73 251 9.89e-48 156
Msa0641510 MtrunA17_Chr4g0038751 40.541 111 56 3 5 113 79 181 5.97e-22 90.5
Msa0641510 MtrunA17_Chr5g0398971 32.927 164 96 5 10 171 79 230 3.51e-20 86.3
Msa0641510 MtrunA17_Chr5g0417791 48.387 93 45 3 1 91 62 153 2.16e-19 82.8
Msa0641510 MtrunA17_Chr4g0076731 47.312 93 43 2 4 95 116 203 5.15e-19 84.0
Msa0641510 MtrunA17_Chr4g0042561 46.067 89 46 2 4 91 72 159 2.05e-18 80.5
Msa0641510 MtrunA17_Chr6g0453131 37.607 117 65 3 4 113 77 192 2.10e-18 81.6
Msa0641510 MtrunA17_Chr8g0359921 45.122 82 43 2 10 91 83 162 2.11e-18 81.3
Msa0641510 MtrunA17_Chr7g0263931 40.984 122 66 4 6 122 76 196 3.64e-18 80.5
Msa0641510 MtrunA17_Chr2g0326361 50.602 83 39 2 10 90 83 165 4.65e-18 80.1
Msa0641510 MtrunA17_Chr6g0453451 42.708 96 53 2 10 105 89 182 1.48e-17 79.0
Msa0641510 MtrunA17_Chr1g0200561 47.561 82 37 2 10 91 91 166 1.99e-17 79.0
Msa0641510 MtrunA17_Chr4g0047841 38.281 128 56 4 10 116 84 209 2.46e-17 78.6
Msa0641510 MtrunA17_Chr8g0384721 38.596 114 61 4 10 116 76 187 3.01e-17 77.4
Msa0641510 MtrunA17_Chr4g0018391 48.780 82 36 3 10 91 79 154 5.47e-17 77.4
Msa0641510 MtrunA17_Chr8g0385991 47.619 84 41 2 12 92 83 166 8.21e-17 75.5
Msa0641510 MtrunA17_Chr5g0433781 46.914 81 39 2 10 90 77 153 8.72e-17 77.8
Msa0641510 MtrunA17_Chr7g0252971 42.857 91 43 2 10 91 77 167 8.88e-17 77.0
Msa0641510 MtrunA17_Chr3g0144271 49.412 85 38 3 10 92 93 174 1.38e-16 76.6
Msa0641510 MtrunA17_Chr2g0318101 40.870 115 51 5 10 113 84 192 1.40e-16 76.3
Msa0641510 MtrunA17_Chr2g0309891 46.341 82 41 2 10 91 77 155 1.64e-16 76.3
Msa0641510 MtrunA17_Chr8g0372121 45.556 90 43 3 10 99 78 161 2.53e-16 75.5
Msa0641510 MtrunA17_Chr6g0481091 45.349 86 43 2 10 95 77 158 2.80e-16 74.3
Msa0641510 MtrunA17_Chr3g0130731 41.304 92 52 1 10 101 76 165 2.95e-16 75.1
Msa0641510 MtrunA17_Chr2g0309331 36.697 109 61 3 10 118 82 182 5.43e-16 74.7
Msa0641510 MtrunA17_Chr7g0214071 43.478 92 46 3 2 92 73 159 5.60e-16 73.6
Msa0641510 MtrunA17_Chr2g0318081 45.122 82 41 3 10 91 85 162 8.61e-16 74.3
Msa0641510 MtrunA17_Chr3g0124761 42.045 88 49 1 10 97 76 161 9.03e-16 73.6
Msa0641510 MtrunA17_Chr3g0113031 45.783 83 43 2 10 91 9 90 1.26e-15 72.8
Msa0641510 MtrunA17_Chr8g0346001 37.273 110 62 3 10 113 87 195 1.67e-15 73.6
Msa0641510 MtrunA17_Chr8g0361731 39.583 96 50 3 4 91 76 171 1.85e-15 73.6
Msa0641510 MtrunA17_Chr3g0091921 43.333 90 43 3 5 91 80 164 4.42e-15 71.6
Msa0641510 MtrunA17_Chr5g0417001 52.308 65 29 2 4 66 76 140 5.64e-15 72.0
Msa0641510 MtrunA17_Chr3g0113001 57.895 57 23 1 10 66 34 89 6.92e-15 71.2
Msa0641510 MtrunA17_Chr5g0405211 43.902 82 40 2 10 91 80 155 7.98e-15 71.6
Msa0641510 MtrunA17_Chr4g0060931 43.529 85 40 3 10 91 86 165 1.06e-14 71.2
Msa0641510 MtrunA17_Chr7g0217711 47.887 71 36 1 10 80 88 157 1.17e-14 68.6
Msa0641510 MtrunA17_Chr7g0217721 57.895 57 23 1 10 66 88 143 1.18e-14 70.9
Msa0641510 MtrunA17_Chr6g0461661 55.172 58 25 1 10 66 87 144 1.21e-14 71.2
Msa0641510 MtrunA17_Chr3g0109821 32.215 149 79 5 10 158 77 203 1.31e-14 71.2
Msa0641510 MtrunA17_Chr2g0311651 36.449 107 55 4 12 105 94 200 1.79e-14 70.1
Msa0641510 MtrunA17_Chr1g0197351 44.706 85 43 2 10 91 113 196 2.12e-14 70.5
Msa0641510 MtrunA17_Chr3g0139331 40.217 92 49 2 10 100 80 166 2.19e-14 70.1
Msa0641510 MtrunA17_Chr2g0312321 40.449 89 44 3 6 91 74 156 2.99e-14 69.7
Msa0641510 MtrunA17_Chr1g0183741 40.449 89 41 3 6 91 75 154 3.43e-14 68.9
Msa0641510 MtrunA17_Chr2g0316971 55.172 58 25 1 10 66 92 149 4.31e-14 69.7
Msa0641510 MtrunA17_Chr2g0311661 30.714 140 77 4 12 140 93 223 4.51e-14 68.9
Msa0641510 MtrunA17_Chr4g0056541 35.965 114 51 5 10 122 79 171 5.72e-14 68.9
Msa0641510 MtrunA17_Chr3g0130101 41.463 82 44 3 10 91 78 155 6.14e-14 68.9
Msa0641510 MtrunA17_Chr7g0261411 40.449 89 41 3 6 91 75 154 1.16e-13 67.8
Msa0641510 MtrunA17_Chr5g0442771 37.374 99 50 3 12 100 89 185 1.20e-13 67.8
Msa0641510 MtrunA17_Chr1g0147421 31.944 144 88 4 10 151 97 232 3.06e-13 67.0
Msa0641510 MtrunA17_Chr4g0017921 40.449 89 46 2 10 98 80 161 3.13e-13 67.0
Msa0641510 MtrunA17_Chr6g0484441 42.683 82 41 3 10 91 74 149 3.46e-13 66.6
Msa0641510 MtrunA17_Chr5g0428991 42.169 83 42 3 10 91 96 173 3.63e-13 67.0
Msa0641510 MtrunA17_Chr7g0253011 51.667 60 26 1 10 66 86 145 4.17e-13 66.6
Msa0641510 MtrunA17_Chr1g0201021 56.140 57 22 2 10 65 90 144 1.14e-12 65.9
Msa0641510 MtrunA17_Chr3g0131911 42.697 89 39 3 12 91 83 168 1.25e-12 64.3
Msa0641510 MtrunA17_Chr2g0321741 53.571 56 25 1 10 65 62 116 1.40e-12 65.1
Msa0641510 MtrunA17_Chr3g0128151 42.169 83 42 3 10 91 93 170 1.48e-12 65.5
Msa0641510 MtrunA17_Chr4g0054791 40.964 83 44 2 10 90 77 156 1.59e-12 64.7
Msa0641510 MtrunA17_Chr3g0128111 41.463 82 44 2 10 91 113 190 2.31e-12 63.5
Msa0641510 MtrunA17_Chr7g0243371 43.939 66 36 1 2 66 25 90 2.36e-12 61.2
Msa0641510 MtrunA17_Chr5g0400461 42.529 87 38 2 10 90 77 157 3.19e-12 63.9
Msa0641510 MtrunA17_Chr1g0197361 37.647 85 48 2 12 96 82 161 1.15e-11 62.8
Msa0641510 MtrunA17_Chr3g0092671 36.559 93 54 2 4 96 71 158 1.58e-11 62.4
Msa0641510 MtrunA17_Chr8g0364791 34.091 88 54 3 4 91 71 154 1.91e-11 62.0
Msa0641510 MtrunA17_Chr8g0345671 43.529 85 36 4 8 90 81 155 4.94e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0641510 AT3G44350.2 50.000 190 73 6 4 192 73 241 9.03e-54 171
Msa0641510 AT5G22380.1 54.375 160 66 3 4 162 74 227 2.46e-50 162
Msa0641510 AT3G44350.1 64.045 89 30 1 4 92 73 159 5.46e-36 124
Msa0641510 AT2G17040.1 33.333 150 80 5 4 145 69 206 4.60e-20 85.5
Msa0641510 AT2G02450.2 50.000 82 36 1 10 91 120 196 2.14e-19 85.1
Msa0641510 AT2G02450.1 50.000 82 36 1 10 91 120 196 2.35e-19 84.7
Msa0641510 AT4G27410.2 45.122 82 41 2 10 91 83 160 2.46e-17 78.2
Msa0641510 AT3G15500.1 46.341 82 40 2 10 91 83 160 2.98e-17 78.2
Msa0641510 AT1G61110.1 41.441 111 54 3 10 110 85 194 3.02e-17 78.6
Msa0641510 AT4G17980.2 43.678 87 47 2 5 90 72 157 4.41e-17 77.4
Msa0641510 AT4G27410.3 45.122 82 41 2 10 91 100 177 4.59e-17 77.8
Msa0641510 AT4G17980.1 43.678 87 47 2 5 90 72 157 4.94e-17 77.0
Msa0641510 AT1G52890.1 45.122 82 41 2 10 91 83 160 5.95e-17 77.4
Msa0641510 AT3G15510.1 43.689 103 45 4 10 101 86 186 6.10e-17 77.8
Msa0641510 AT1G76420.1 45.977 87 42 2 10 95 91 173 1.04e-16 77.0
Msa0641510 AT1G56010.1 43.023 86 48 1 6 91 18 102 1.16e-16 75.9
Msa0641510 AT1G69490.1 45.455 88 46 2 10 96 78 164 1.45e-16 75.9
Msa0641510 AT1G56010.2 43.023 86 48 1 6 91 85 169 1.82e-16 76.3
Msa0641510 AT1G79580.3 41.758 91 47 1 10 100 89 173 2.51e-16 76.3
Msa0641510 AT1G79580.5 41.758 91 47 1 10 100 89 173 2.51e-16 76.3
Msa0641510 AT1G79580.4 41.758 91 47 1 10 100 89 173 2.51e-16 76.3
Msa0641510 AT1G79580.2 41.758 91 47 1 10 100 89 173 2.51e-16 76.3
Msa0641510 AT1G79580.1 41.758 91 47 1 10 100 89 173 2.51e-16 76.3
Msa0641510 AT1G71930.2 41.000 100 43 3 10 109 81 164 3.19e-16 75.5
Msa0641510 AT1G71930.1 41.000 100 43 3 10 109 81 164 3.19e-16 75.5
Msa0641510 AT5G24590.2 35.000 120 64 3 10 118 84 200 3.19e-16 76.3
Msa0641510 AT4G36160.1 41.667 96 41 3 10 105 82 162 3.94e-16 75.9
Msa0641510 AT4G36160.3 41.667 96 41 3 10 105 82 162 3.94e-16 75.9
Msa0641510 AT5G66300.1 27.228 202 110 7 10 184 84 275 4.28e-16 74.7
Msa0641510 AT4G36160.2 41.667 96 41 3 10 105 86 166 4.34e-16 75.5
Msa0641510 AT5G63790.1 41.935 93 50 2 10 100 119 209 5.06e-16 75.1
Msa0641510 AT5G63790.2 41.935 93 50 2 10 100 129 219 6.00e-16 74.7
Msa0641510 AT1G01720.1 44.318 88 46 2 10 96 76 161 6.95e-16 74.3
Msa0641510 AT5G46590.1 44.444 81 43 1 10 90 77 155 8.24e-16 73.9
Msa0641510 AT5G08790.1 40.000 100 53 3 10 104 76 173 8.84e-16 73.9
Msa0641510 AT3G10480.1 42.683 82 44 2 10 91 98 176 1.16e-15 74.7
Msa0641510 AT2G18060.3 43.902 82 40 2 10 91 81 156 1.46e-15 73.9
Msa0641510 AT2G18060.1 43.902 82 40 2 10 91 81 156 1.46e-15 73.9
Msa0641510 AT5G13180.1 45.055 91 42 3 6 92 73 159 1.64e-15 72.8
Msa0641510 AT1G26870.1 53.846 65 28 2 4 66 78 142 1.85e-15 73.9
Msa0641510 AT3G10500.1 42.529 87 46 2 10 96 80 162 1.98e-15 73.9
Msa0641510 AT1G65910.1 42.683 82 43 2 10 91 77 154 2.01e-15 73.9
Msa0641510 AT3G10480.3 42.683 82 44 2 10 91 131 209 2.10e-15 73.9
Msa0641510 AT5G61430.2 44.706 85 39 3 10 91 22 101 2.29e-15 72.8
Msa0641510 AT3G04060.1 44.706 85 40 2 10 91 89 169 2.34e-15 73.2
Msa0641510 AT5G18270.2 39.815 108 60 3 10 113 90 196 2.39e-15 73.2
Msa0641510 AT5G61430.1 44.706 85 39 3 10 91 85 164 2.45e-15 73.2
Msa0641510 AT5G18270.1 39.815 108 60 3 10 113 90 196 2.46e-15 73.2
Msa0641510 AT3G10480.2 42.683 82 43 2 10 91 98 175 2.87e-15 73.6
Msa0641510 AT3G12977.2 42.529 87 45 3 6 91 30 112 2.93e-15 71.6
Msa0641510 AT5G39610.1 44.706 85 39 3 10 91 89 168 3.11e-15 72.4
Msa0641510 AT1G62700.1 45.122 82 39 3 10 91 79 154 4.27e-15 72.8
Msa0641510 AT1G62700.2 45.122 82 39 3 10 91 79 154 4.27e-15 72.8
Msa0641510 AT1G77450.1 42.683 82 45 1 10 91 79 158 4.33e-15 71.6
Msa0641510 AT5G62380.2 37.624 101 46 3 2 91 60 154 5.03e-15 72.4
Msa0641510 AT5G62380.1 37.624 101 46 3 2 91 60 154 5.03e-15 72.4
Msa0641510 AT3G17730.1 43.023 86 45 2 10 95 77 158 5.27e-15 71.2
Msa0641510 AT5G07680.1 43.529 85 40 3 10 91 86 165 5.32e-15 72.4
Msa0641510 AT5G07680.2 43.529 85 40 3 10 91 72 151 6.25e-15 72.0
Msa0641510 AT1G33060.1 43.902 82 42 2 10 91 95 172 6.69e-15 72.8
Msa0641510 AT1G33060.2 43.902 82 42 2 10 91 95 172 7.37e-15 72.4
Msa0641510 AT3G18400.1 43.902 82 41 2 10 91 74 150 8.11e-15 71.6
Msa0641510 AT3G12977.1 43.529 85 43 3 8 91 85 165 8.51e-15 71.2
Msa0641510 AT3G15170.1 44.828 87 46 2 10 95 89 174 8.70e-15 71.6
Msa0641510 AT1G12260.1 45.122 82 39 3 10 91 79 154 1.08e-14 71.6
Msa0641510 AT1G12260.2 45.122 82 39 3 10 91 79 154 1.19e-14 71.2
Msa0641510 AT5G39820.1 43.590 78 42 2 4 79 82 159 1.30e-14 71.2
Msa0641510 AT3G04070.2 43.956 91 41 4 10 91 79 168 1.39e-14 71.2
Msa0641510 AT3G49530.2 42.683 82 44 2 10 91 84 162 1.43e-14 71.2
Msa0641510 AT3G29035.1 44.706 85 39 3 10 91 93 172 1.48e-14 70.9
Msa0641510 AT2G46770.1 56.140 57 24 1 10 66 88 143 1.76e-14 70.9
Msa0641510 AT3G49530.1 42.683 82 44 2 10 91 84 162 1.92e-14 71.2
Msa0641510 AT2G33480.3 44.444 90 43 4 6 92 17 102 2.32e-14 68.9
Msa0641510 AT4G10350.2 38.462 104 58 3 10 112 34 132 4.07e-14 69.3
Msa0641510 AT3G10490.1 42.683 82 44 2 10 91 98 176 5.19e-14 68.6
Msa0641510 AT4G10350.1 38.462 104 58 3 10 112 81 179 5.90e-14 69.3
Msa0641510 AT2G24430.2 43.373 83 42 3 10 91 85 163 6.50e-14 68.9
Msa0641510 AT2G24430.1 43.373 83 42 3 10 91 85 163 6.50e-14 68.9
Msa0641510 AT3G10490.2 41.463 82 45 2 10 91 98 176 7.11e-14 69.3
Msa0641510 AT3G12910.1 40.496 121 59 5 12 121 93 211 8.08e-14 68.6
Msa0641510 AT3G03200.1 37.121 132 68 5 10 139 77 195 8.44e-14 69.3
Msa0641510 AT2G33480.1 44.444 90 43 4 6 92 74 159 8.49e-14 68.2
Msa0641510 AT2G33480.2 42.222 90 43 3 6 92 74 157 1.10e-13 67.8
Msa0641510 AT4G35580.3 43.902 82 42 3 10 91 80 157 1.16e-13 68.9
Msa0641510 AT4G35580.2 43.902 82 42 3 10 91 80 157 1.21e-13 68.9
Msa0641510 AT4G35580.1 43.902 82 42 3 10 91 80 157 1.35e-13 68.6
Msa0641510 AT3G04070.1 50.820 61 26 1 10 66 79 139 1.42e-13 68.6
Msa0641510 AT1G32510.1 40.230 87 44 2 10 90 77 161 1.48e-13 67.8
Msa0641510 AT3G61910.1 52.632 57 26 1 10 66 83 138 1.49e-13 68.2
Msa0641510 AT5G17260.1 42.683 82 44 2 10 91 77 155 1.90e-13 68.2
Msa0641510 AT1G33280.1 31.056 161 75 5 10 153 80 221 2.11e-13 67.4
Msa0641510 AT5G53950.1 55.172 58 25 1 10 66 86 143 2.30e-13 67.8
Msa0641510 AT2G43000.2 38.835 103 58 3 12 113 11 109 2.40e-13 65.9
Msa0641510 AT5G46590.2 52.632 57 27 0 10 66 77 133 3.57e-13 66.6
Msa0641510 AT5G04410.1 36.957 92 54 3 5 96 75 162 3.69e-13 67.4
Msa0641510 AT3G10490.4 41.026 78 43 2 14 91 2 76 5.19e-13 66.6
Msa0641510 AT3G10490.3 41.026 78 43 2 14 91 2 76 5.19e-13 66.6
Msa0641510 AT1G32770.1 52.632 57 26 1 10 66 88 143 6.77e-13 66.2
Msa0641510 AT2G43000.1 38.835 103 58 3 12 113 89 187 7.08e-13 65.9
Msa0641510 AT2G18060.2 42.466 73 36 2 19 91 2 68 9.61e-13 65.5
Msa0641510 AT4G28530.1 39.080 87 45 3 6 91 91 170 2.83e-12 64.7
Msa0641510 AT1G54330.1 41.111 90 46 2 2 91 69 151 3.40e-12 63.9
Msa0641510 AT1G34190.1 51.786 56 26 1 10 65 87 141 7.95e-12 63.5
Msa0641510 AT1G32870.1 36.782 87 53 2 10 96 79 163 1.37e-11 62.8
Msa0641510 AT1G32870.2 36.782 87 53 2 10 96 79 163 1.41e-11 62.8
Msa0641510 AT1G32870.3 36.782 87 53 2 10 96 115 199 1.74e-11 62.8
Msa0641510 AT1G34180.4 50.000 56 27 1 10 65 99 153 2.21e-11 62.4
Msa0641510 AT1G34180.3 50.000 56 27 1 10 65 87 141 2.34e-11 62.0
Msa0641510 AT5G09330.5 46.032 63 33 1 4 66 71 132 2.63e-11 62.0
Msa0641510 AT5G09330.2 46.032 63 33 1 4 66 71 132 2.63e-11 62.0
Msa0641510 AT5G09330.4 46.032 63 33 1 4 66 71 132 2.63e-11 62.0
Msa0641510 AT5G09330.3 46.032 63 33 1 4 66 71 132 2.63e-11 62.0
Msa0641510 AT5G09330.1 46.032 63 33 1 4 66 71 132 2.63e-11 62.0
Msa0641510 AT1G34180.2 50.000 56 27 1 10 65 99 153 2.73e-11 62.0
Msa0641510 AT1G34180.1 50.000 56 27 1 10 65 87 141 2.82e-11 62.0
Msa0641510 AT2G27300.1 43.243 74 40 2 10 83 84 155 3.16e-11 61.6
Msa0641510 AT3G44290.2 45.946 74 38 2 10 83 84 155 8.73e-11 59.3

Find 66 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTGAAATTTCTCAATT+AGG 0.161327 4_3:-42139459 Msa0641510:CDS
TCTTCGGATAACAAAGTTAT+TGG 0.171109 4_3:-42140966 Msa0641510:CDS
CATTTGAAATTTCTCAATTA+GGG 0.213508 4_3:-42139458 Msa0641510:CDS
CCCATTCCCATAGTGATTCT+TGG 0.233146 4_3:+42139331 None:intergenic
ATATAGGATCTTTGTAAATA+TGG 0.255612 4_3:-42139103 Msa0641510:three_prime_UTR
CTTCGGATAACAAAGTTATT+GGG 0.268350 4_3:-42140965 Msa0641510:CDS
ACCATGAGCTGGAGTTAATT+AGG 0.306112 4_3:+42139287 None:intergenic
GAGAAAGAGTTGATCAATTA+CGG 0.316679 4_3:-42139542 Msa0641510:CDS
TTCAATTCCAAGAATCACTA+TGG 0.318489 4_3:-42139338 Msa0641510:CDS
AAAACCATGGTGTTCTATAA+AGG 0.328853 4_3:-42140936 Msa0641510:CDS
TCAACTCTTTCTCTCTCTAA+TGG 0.337247 4_3:+42139552 None:intergenic
TACAAAGATCCTATATTTCA+TGG 0.337676 4_3:+42139110 None:intergenic
TCCTGGTTATGTTTATTCTT+CGG 0.357166 4_3:-42140982 Msa0641510:CDS
AATAGTAACAATGAAAATAA+TGG 0.367657 4_3:-42139369 Msa0641510:CDS
GAACTACTGCTTGTGGGTAT+TGG 0.373733 4_3:-42141019 Msa0641510:CDS
GTGTCGAGTGTATGTAATAT+CGG 0.375874 4_3:-42139601 Msa0641510:CDS
CCACAAGCAGTAGTTCTATT+AGG 0.380796 4_3:+42141026 None:intergenic
CAAGTGGAAGGAAAACAAAA+TGG 0.388513 4_3:-42140905 Msa0641510:CDS
GAGATTGATCAAAACCCATT+TGG 0.416068 4_3:-42139513 Msa0641510:CDS
TCATCATATTTGTTTAGAAT+AGG 0.440578 4_3:-42139153 Msa0641510:three_prime_UTR
AGAAAGAGTTGATCAATTAC+GGG 0.452891 4_3:-42139541 Msa0641510:CDS
TGTGGGTATTGGAAGGCAAC+AGG 0.456765 4_3:-42141008 Msa0641510:CDS
CTAGTGGCATATGATTACTT+TGG 0.471161 4_3:+42139430 None:intergenic
TGGTGCCACATCTACTCATC+AGG 0.471854 4_3:-42139493 Msa0641510:CDS
TCCAAGAATCACTATGGGAA+TGG 0.475257 4_3:-42139332 Msa0641510:CDS
GAGTCGTGTTTATACTTGAC+GGG 0.475871 4_3:+42139246 None:intergenic
GAGGTTCAAATAGCACAAAT+TGG 0.477207 4_3:-42139398 Msa0641510:CDS
TGAGTAGATGTGGCACCAAA+TGG 0.483418 4_3:+42139498 None:intergenic
CCAAGAATCACTATGGGAAT+GGG 0.486561 4_3:-42139331 Msa0641510:CDS
TGGAAGGCAACAGGTTCTCC+TGG 0.494297 4_3:-42140999 Msa0641510:CDS
CTAATAGAACTACTGCTTGT+GGG 0.501976 4_3:-42141025 Msa0641510:CDS
CATATGCCACTAGAGGTTGT+AGG 0.515500 4_3:-42139420 Msa0641510:CDS
ACAAAGATCCTATATTTCAT+GGG 0.516646 4_3:+42139111 None:intergenic
AGGTCAAGAGAGAGAAGCAA+GGG 0.520943 4_3:-42141057 Msa0641510:CDS
GAGGTGTGGCAGTGTTGGAT+TGG 0.521829 4_3:+42140847 None:intergenic
TGTCGAGTGTATGTAATATC+GGG 0.527035 4_3:-42139600 Msa0641510:CDS
GGATTGGTTAGATACTTGAA+TGG 0.527741 4_3:+42140863 None:intergenic
TGATGTTCAAATTTATTGTG+AGG 0.538395 4_3:+42139073 None:intergenic
AAGAGAGAGAAGCAAGGGGA+GGG 0.540485 4_3:-42141052 Msa0641510:CDS
TACCTGAGGTGTGGCAGTGT+TGG 0.546731 4_3:+42140842 None:intergenic
CGAGTCGTGTTTATACTTGA+CGG 0.546832 4_3:+42139245 None:intergenic
TTGAGTATCCCACCATGAGC+TGG 0.552044 4_3:+42139276 None:intergenic
ATCCAACACTGCCACACCTC+AGG 0.560321 4_3:-42140844 Msa0641510:intron
TTTGAAATTTCTCAATTAGG+GGG 0.567316 4_3:-42139456 Msa0641510:CDS
TTCGGATAACAAAGTTATTG+GGG 0.568678 4_3:-42140964 Msa0641510:CDS
GAGTAGATGTGGCACCAAAT+GGG 0.573912 4_3:+42139499 None:intergenic
CAATGAAAATAATGGTGATG+AGG 0.574582 4_3:-42139361 Msa0641510:CDS
CAAGAGAGAGAAGCAAGGGG+AGG 0.575212 4_3:-42141053 Msa0641510:CDS
AAGGAAAAGCTCCAAGTGGA+AGG 0.577529 4_3:-42140917 Msa0641510:CDS
CCTAATAGAACTACTGCTTG+TGG 0.583756 4_3:-42141026 Msa0641510:CDS
TCCTAATTAACTCCAGCTCA+TGG 0.586586 4_3:-42139288 Msa0641510:exon
ATTTGAAATTTCTCAATTAG+GGG 0.591470 4_3:-42139457 Msa0641510:CDS
TCCGAAGAATAAACATAACC+AGG 0.594367 4_3:+42140981 None:intergenic
TACTGCTTGTGGGTATTGGA+AGG 0.594408 4_3:-42141015 Msa0641510:CDS
TCAATTCCAAGAATCACTAT+GGG 0.601158 4_3:-42139337 Msa0641510:CDS
AATTAACTCCAGCTCATGGT+GGG 0.625503 4_3:-42139284 Msa0641510:three_prime_UTR
CAGGTCAAGAGAGAGAAGCA+AGG 0.633366 4_3:-42141058 Msa0641510:CDS
AAGTAATCATATGCCACTAG+AGG 0.633670 4_3:-42139427 Msa0641510:CDS
GAACCTCCTACAACCTCTAG+TGG 0.635358 4_3:+42139414 None:intergenic
TAATTAACTCCAGCTCATGG+TGG 0.645643 4_3:-42139285 Msa0641510:three_prime_UTR
TATAAAGGAAAAGCTCCAAG+TGG 0.670306 4_3:-42140921 Msa0641510:CDS
ATGCCACTAGAGGTTGTAGG+AGG 0.675101 4_3:-42139417 Msa0641510:CDS
TGCATCCTGATGAGTAGATG+TGG 0.677636 4_3:+42139488 None:intergenic
GGTCAAGAGAGAGAAGCAAG+GGG 0.681277 4_3:-42141056 Msa0641510:CDS
AGTCGTGTTTATACTTGACG+GGG 0.694889 4_3:+42139247 None:intergenic
TGCAATATATACCTGAGGTG+TGG 0.718087 4_3:+42140833 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCAAATAATTTCATATTTT+TGG - chr4_3:42139771-42139790 Msa0641510:intron 10.0%
!!! TAATTTTTTTTTATTACTGA+TGG - chr4_3:42142271-42142290 Msa0641510:intron 10.0%
!!! AATTTTTTTTTATTACTGAT+GGG - chr4_3:42142272-42142291 Msa0641510:intron 10.0%
!! AAAATGAAAATTAACATATA+TGG - chr4_3:42142810-42142829 Msa0641510:intron 10.0%
!!! TATACTATTGTTTTATTTAT+AGG + chr4_3:42142870-42142889 None:intergenic 10.0%
!!! AAATCTTATTTAATCAATTA+TGG + chr4_3:42142987-42143006 None:intergenic 10.0%
!! AAAATTGTAAAAAAAAATTC+GGG + chr4_3:42143296-42143315 None:intergenic 10.0%
!!! TCATATATCTAATAAATTTT+AGG + chr4_3:42143623-42143642 None:intergenic 10.0%
!!! AAAATTTTCAAAAACAAAAA+AGG - chr4_3:42143642-42143661 Msa0641510:intron 10.0%
!! ATATGAAATTATTTGAAAGT+AGG + chr4_3:42139768-42139787 None:intergenic 15.0%
!! TAATAATTAAGGTATACAAT+AGG - chr4_3:42142720-42142739 Msa0641510:intron 15.0%
!!! ACTTTTTCTTCTTAAAATTT+AGG - chr4_3:42143045-42143064 Msa0641510:intron 15.0%
!!! AACTTTTAACTTATGTTTTT+TGG - chr4_3:42143851-42143870 Msa0641510:intron 15.0%
!! AATAGTAACAATGAAAATAA+TGG - chr4_3:42144136-42144155 Msa0641510:intron 15.0%
!! TAAATATTCATGTATGATGT+TGG - chr4_3:42139285-42139304 Msa0641510:three_prime_UTR 20.0%
!!! AACATCTACCTTAATATTTT+TGG - chr4_3:42139646-42139665 Msa0641510:intron 20.0%
!!! ACATCTACCTTAATATTTTT+GGG - chr4_3:42139647-42139666 Msa0641510:intron 20.0%
!! TATTATTTGTAGAGTAACTA+AGG + chr4_3:42139870-42139889 None:intergenic 20.0%
!! TTAGTTACTCTACAAATAAT+AGG - chr4_3:42139869-42139888 Msa0641510:intron 20.0%
!! TAGTTACTCTACAAATAATA+GGG - chr4_3:42139870-42139889 Msa0641510:intron 20.0%
!! TGAATTAGAATTCACTTTAT+TGG + chr4_3:42140187-42140206 None:intergenic 20.0%
!!! ATAGCTTCTTTAACATTTTT+AGG + chr4_3:42140231-42140250 None:intergenic 20.0%
!!! TATGTTAATGACATTGTTTT+TGG - chr4_3:42140805-42140824 Msa0641510:intron 20.0%
!!! TTTACTCTGAGAAATAAAAA+TGG + chr4_3:42140950-42140969 None:intergenic 20.0%
!! TTAAGCAATTTGAAAAATTG+AGG - chr4_3:42141697-42141716 Msa0641510:intron 20.0%
!! TAAGCAATTTGAAAAATTGA+GGG - chr4_3:42141698-42141717 Msa0641510:intron 20.0%
!! AAAAAATTGGAATGAATCAT+AGG + chr4_3:42141870-42141889 None:intergenic 20.0%
!! NNNNNNAAGATAAAGAGCAA+TGG - chr4_3:42142411-42142430 Msa0641510:intron 20.0%
!!! CTTGTATGAATTTCATTTTA+AGG + chr4_3:42142838-42142857 None:intergenic 20.0%
!!! CTGAAAAAACTGAAATTTTT+CGG + chr4_3:42143323-42143342 None:intergenic 20.0%
!! AAAAATTCAAAAAATAAGCC+AGG - chr4_3:42143420-42143439 Msa0641510:intron 20.0%
!! AAAATTCAAAAAATAAGCCA+GGG - chr4_3:42143421-42143440 Msa0641510:intron 20.0%
!!! TCATTTGAAATTTCTCAATT+AGG - chr4_3:42144046-42144065 Msa0641510:intron 20.0%
!!! CATTTGAAATTTCTCAATTA+GGG - chr4_3:42144047-42144066 Msa0641510:intron 20.0%
!!! ATTTGAAATTTCTCAATTAG+GGG - chr4_3:42144048-42144067 Msa0641510:intron 20.0%
!!! TCATCATATTTGTTTAGAAT+AGG - chr4_3:42144352-42144371 Msa0641510:intron 20.0%
!! ATATAGGATCTTTGTAAATA+TGG - chr4_3:42144402-42144421 Msa0641510:intron 20.0%
! AGCATATAATTAATCTTCCT+CGG + chr4_3:42139115-42139134 None:intergenic 25.0%
! TATGTTGGATATTTGTGTAT+TGG - chr4_3:42139245-42139264 Msa0641510:three_prime_UTR 25.0%
!! TAATATTTTGCAAAACCTTC+TGG - chr4_3:42139364-42139383 Msa0641510:CDS 25.0%
! TATGTTGGATATTTGTGTAT+TGG + chr4_3:42139245-42139264 None:intergenic 25.0%
!!! CAATTATAAGATTTTGAGGA+TGG + chr4_3:42140131-42140150 None:intergenic 25.0%
! CATCCTCAAAATCTTATAAT+TGG - chr4_3:42140129-42140148 Msa0641510:intron 25.0%
!! CTTCCAATTATAAGATTTTG+AGG + chr4_3:42140135-42140154 None:intergenic 25.0%
! CTCAACATAAATCTTCATTT+AGG + chr4_3:42140584-42140603 None:intergenic 25.0%
! TTCAATTTGTAGACATGATT+CGG + chr4_3:42140637-42140656 None:intergenic 25.0%
!! AAATTGAAGAAAGCTTTGTA+TGG - chr4_3:42140649-42140668 Msa0641510:intron 25.0%
! AAACTTCTTCACTATATTCT+TGG + chr4_3:42140977-42140996 None:intergenic 25.0%
! AAGAATATAGTGAAGAAGTT+TGG - chr4_3:42140976-42140995 Msa0641510:CDS 25.0%
!! AACAATACCATTTTCATCTT+TGG + chr4_3:42141055-42141074 None:intergenic 25.0%
! TTGTTAATCAAAGCATGTAT+AGG - chr4_3:42141073-42141092 Msa0641510:intron 25.0%
! ATCAATAACACCAATGATTA+TGG - chr4_3:42141228-42141247 Msa0641510:intron 25.0%
! GATAGGAAAAATACTTATAG+AGG - chr4_3:42141324-42141343 Msa0641510:intron 25.0%
! TAGGAAATAACTTGATTTCT+TGG - chr4_3:42141358-42141377 Msa0641510:intron 25.0%
! TTAGTTATGCTATGTTGAAT+AGG + chr4_3:42141561-42141580 None:intergenic 25.0%
! TTCAAATTGCTTAACATCTA+AGG + chr4_3:42141691-42141710 None:intergenic 25.0%
! AAGCAATTTGAAAAATTGAG+GGG - chr4_3:42141699-42141718 Msa0641510:intron 25.0%
!!! TCATTCCAATTTTTTTCCTT+TGG - chr4_3:42141875-42141894 Msa0641510:intron 25.0%
! GAATACCAAAGGAAAAAAAT+TGG + chr4_3:42141883-42141902 None:intergenic 25.0%
!! ATAAAAGTGTAGAATACCAA+AGG + chr4_3:42141894-42141913 None:intergenic 25.0%
!! TCTACACTTTTATGTTCTTT+TGG - chr4_3:42141901-42141920 Msa0641510:intron 25.0%
!!! TATGCATGAAGATCTTATTT+TGG - chr4_3:42141936-42141955 Msa0641510:intron 25.0%
! ATACTATGAAGTATGTTTAG+AGG - chr4_3:42142182-42142201 Msa0641510:intron 25.0%
! TCGTCATGATGTAATAATTA+AGG - chr4_3:42142709-42142728 Msa0641510:intron 25.0%
!! TTTTATGACCAACAAATACT+TGG - chr4_3:42142893-42142912 Msa0641510:intron 25.0%
! ACATAGTATGAATGACATTT+AGG - chr4_3:42143008-42143027 Msa0641510:intron 25.0%
! CATAGTATGAATGACATTTA+GGG - chr4_3:42143009-42143028 Msa0641510:intron 25.0%
! TTAACTGATTAAACTTTGCA+GGG + chr4_3:42143521-42143540 None:intergenic 25.0%
! TTTAACTGATTAAACTTTGC+AGG + chr4_3:42143520-42143539 None:intergenic 25.0%
! AAGGAAAAAAAAATAAGCCA+GGG + chr4_3:42143249-42143268 None:intergenic 25.0%
!! CCTGGAAAAAAAATTTTTGA+AGG + chr4_3:42143268-42143287 None:intergenic 25.0%
!!! CCTTCAAAAATTTTTTTTCC+AGG - chr4_3:42143265-42143284 Msa0641510:intron 25.0%
! AAATTCAAAAAATAAGCCAG+GGG - chr4_3:42143422-42143441 Msa0641510:intron 25.0%
! TTTAACTGATTAAACTTTGC+AGG - chr4_3:42143520-42143539 Msa0641510:intron 25.0%
! TTAACTGATTAAACTTTGCA+GGG - chr4_3:42143521-42143540 Msa0641510:intron 25.0%
!!! TTTGTTGTTATCTAGCTTAA+AGG + chr4_3:42143769-42143788 None:intergenic 25.0%
!!! TTTTTGGTGTTTTATAGTTG+AGG - chr4_3:42143867-42143886 Msa0641510:intron 25.0%
!! TTTGAAATTTCTCAATTAGG+GGG - chr4_3:42144049-42144068 Msa0641510:intron 25.0%
!! TCATTTTACCCATGAAATAT+AGG - chr4_3:42144386-42144405 Msa0641510:intron 25.0%
! ACAAAGATCCTATATTTCAT+GGG + chr4_3:42144397-42144416 None:intergenic 25.0%
! TACAAAGATCCTATATTTCA+TGG + chr4_3:42144398-42144417 None:intergenic 25.0%
! TGATGTTCAAATTTATTGTG+AGG + chr4_3:42144435-42144454 None:intergenic 25.0%
TATTCAGTTACATCTTAAGC+AGG - chr4_3:42139142-42139161 Msa0641510:three_prime_UTR 30.0%
GCAAAATGTTGAACTTAAGT+TGG - chr4_3:42139189-42139208 Msa0641510:three_prime_UTR 30.0%
GCAAAATCTTCACTATATGT+TGG + chr4_3:42139415-42139434 None:intergenic 30.0%
! GCTCTTATAATTCTTGTTGT+TGG - chr4_3:42139453-42139472 Msa0641510:CDS 30.0%
! TTCAACTACACCATTTTGTT+GGG + chr4_3:42139577-42139596 None:intergenic 30.0%
! TTTCAACTACACCATTTTGT+TGG + chr4_3:42139578-42139597 None:intergenic 30.0%
AACAAAATGGTGTAGTTGAA+AGG - chr4_3:42139577-42139596 Msa0641510:CDS 30.0%
! TTTTACATGAAGCATAACTC+TGG + chr4_3:42139628-42139647 None:intergenic 30.0%
GCTTCATCCCAAAAATATTA+AGG + chr4_3:42139657-42139676 None:intergenic 30.0%
ATCATCTATAACCACATTGA+TGG + chr4_3:42139938-42139957 None:intergenic 30.0%
TGATAAAGAAGAAACTAAGC+AGG - chr4_3:42140050-42140069 Msa0641510:intron 30.0%
AAACAAATGACCTTTCATCA+GGG - chr4_3:42140095-42140114 Msa0641510:intron 30.0%
ATAATTGGAAGTCTTGATCA+AGG - chr4_3:42140144-42140163 Msa0641510:intron 30.0%
ATTCACTTTATTGGATCTTC+TGG + chr4_3:42140178-42140197 None:intergenic 30.0%
AAGCTATCATTGATGAATTC+TGG - chr4_3:42140244-42140263 Msa0641510:intron 30.0%
AAGGTTATACTCAAGTAGAA+GGG - chr4_3:42140430-42140449 Msa0641510:intron 30.0%
CAAATTTAAACTGTTCCAGA+TGG - chr4_3:42140530-42140549 Msa0641510:intron 30.0%
!! GTTAAGAGTGTCTTTCTAAA+TGG - chr4_3:42140555-42140574 Msa0641510:intron 30.0%
ATTTATGTTGAGCAACCAAA+AGG - chr4_3:42140592-42140611 Msa0641510:intron 30.0%
TTTATGTTGAGCAACCAAAA+GGG - chr4_3:42140593-42140612 Msa0641510:intron 30.0%
ATTATCATCCTTCACAAACA+AGG + chr4_3:42140761-42140780 None:intergenic 30.0%
TTGTTTGTGAAGGATGATAA+TGG - chr4_3:42140760-42140779 Msa0641510:intron 30.0%
!!! GTTAATGACATTGTTTTTGG+TGG - chr4_3:42140808-42140827 Msa0641510:intron 30.0%
AAGTTGTCCAAAGATGAAAA+TGG - chr4_3:42141045-42141064 Msa0641510:CDS 30.0%
! CTGATATAACTTTTGCAGTA+GGG - chr4_3:42141136-42141155 Msa0641510:intron 30.0%
! TGATATAACTTTTGCAGTAG+GGG - chr4_3:42141137-42141156 Msa0641510:intron 30.0%
! TTCTTTTCACTTGAGTAACA+TGG + chr4_3:42141197-42141216 None:intergenic 30.0%
GTACAAAATGCCATAATCAT+TGG + chr4_3:42141241-42141260 None:intergenic 30.0%
!! AATGCAAATTCTAGGTTGAT+TGG - chr4_3:42141267-42141286 Msa0641510:intron 30.0%
! TTTATGTTCTTTTGGTACCT+TGG - chr4_3:42141909-42141928 Msa0641510:intron 30.0%
ATCTTCATGCATAAAATCCA+AGG + chr4_3:42141929-42141948 None:intergenic 30.0%
!!! CTTATTTTGGCACAATTTTG+TGG - chr4_3:42141949-42141968 Msa0641510:intron 30.0%
TTGTGTTTGTATTCACTCAT+AGG - chr4_3:42142138-42142157 Msa0641510:intron 30.0%
!!! ACTCATAGGTTGTTATTTTG+AGG - chr4_3:42142152-42142171 Msa0641510:intron 30.0%
!!! CTCATAGGTTGTTATTTTGA+GGG - chr4_3:42142153-42142172 Msa0641510:intron 30.0%
!!! TCATAGGTTGTTATTTTGAG+GGG - chr4_3:42142154-42142173 Msa0641510:intron 30.0%
AAACATCTAGTTGACAATGT+TGG - chr4_3:42142243-42142262 Msa0641510:intron 30.0%
AACATCTAGTTGACAATGTT+GGG - chr4_3:42142244-42142263 Msa0641510:intron 30.0%
TCCTGGTTATGTTTATTCTT+CGG - chr4_3:42142523-42142542 Msa0641510:intron 30.0%
TCTTCGGATAACAAAGTTAT+TGG - chr4_3:42142539-42142558 Msa0641510:intron 30.0%
CTTCGGATAACAAAGTTATT+GGG - chr4_3:42142540-42142559 Msa0641510:intron 30.0%
TTCGGATAACAAAGTTATTG+GGG - chr4_3:42142541-42142560 Msa0641510:intron 30.0%
AAAACCATGGTGTTCTATAA+AGG - chr4_3:42142569-42142588 Msa0641510:intron 30.0%
! TTTTCCTTTATAGAACACCA+TGG + chr4_3:42142576-42142595 None:intergenic 30.0%
AATGATGCAATATATACCTG+AGG + chr4_3:42142680-42142699 None:intergenic 30.0%
! CTTTTGATCCAAGTATTTGT+TGG + chr4_3:42142904-42142923 None:intergenic 30.0%
TAACTGATTAAACTTTGCAG+GGG + chr4_3:42143522-42143541 None:intergenic 30.0%
!! TTTTTGGTAAATTGCTGATG+TGG + chr4_3:42143202-42143221 None:intergenic 30.0%
CATCAGCAATTTACCAAAAA+TGG - chr4_3:42143202-42143221 Msa0641510:intron 30.0%
CAATTTACCAAAAATGGCAT+GGG - chr4_3:42143208-42143227 Msa0641510:intron 30.0%
AGGAAAAAAAAATAAGCCAG+GGG + chr4_3:42143248-42143267 None:intergenic 30.0%
GAAGGAAAAAAAAATAAGCC+AGG + chr4_3:42143250-42143269 None:intergenic 30.0%
AAAAAAATTCGGGAAAAACC+TGG + chr4_3:42143286-42143305 None:intergenic 30.0%
CAATTTACCAAAAATGGCAT+GGG + chr4_3:42143208-42143227 None:intergenic 30.0%
TAACTGATTAAACTTTGCAG+GGG - chr4_3:42143522-42143541 Msa0641510:intron 30.0%
AAAAGGAAAAAACAGTTGAG+AGG - chr4_3:42143659-42143678 Msa0641510:intron 30.0%
! GAGAAAGAGTTGATCAATTA+CGG - chr4_3:42143963-42143982 Msa0641510:intron 30.0%
! AGAAAGAGTTGATCAATTAC+GGG - chr4_3:42143964-42143983 Msa0641510:intron 30.0%
! CAATGAAAATAATGGTGATG+AGG - chr4_3:42144144-42144163 Msa0641510:intron 30.0%
TTCAATTCCAAGAATCACTA+TGG - chr4_3:42144167-42144186 Msa0641510:intron 30.0%
TCAATTCCAAGAATCACTAT+GGG - chr4_3:42144168-42144187 Msa0641510:intron 30.0%
! TCAACATTTTGCTCACTTGA+GGG + chr4_3:42139181-42139200 None:intergenic 35.0%
! TTCAACATTTTGCTCACTTG+AGG + chr4_3:42139182-42139201 None:intergenic 35.0%
TTCGTCTTAAAGCAGTATGT+TGG - chr4_3:42139230-42139249 Msa0641510:three_prime_UTR 35.0%
TGTGTCAATAGTGAAGATTG+TGG - chr4_3:42139314-42139333 Msa0641510:CDS 35.0%
!! TTGGCTTTAGAAGTGATCTT+GGG - chr4_3:42139472-42139491 Msa0641510:CDS 35.0%
! TCAACTACACCATTTTGTTG+GGG + chr4_3:42139576-42139595 None:intergenic 35.0%
! AACTCTGGTTGATTCTTGTA+GGG + chr4_3:42139613-42139632 None:intergenic 35.0%
! TAACTCTGGTTGATTCTTGT+AGG + chr4_3:42139614-42139633 None:intergenic 35.0%
AACCTATCATGTACACAACA+GGG - chr4_3:42139686-42139705 Msa0641510:intron 35.0%
CATCTCATATAAGGTAGTTG+TGG + chr4_3:42139730-42139749 None:intergenic 35.0%
CAACTACCTTATATGAGATG+TGG - chr4_3:42139730-42139749 Msa0641510:intron 35.0%
ACCTTATATGAGATGTGGAA+AGG - chr4_3:42139735-42139754 Msa0641510:intron 35.0%
TCCTTTCCACATCTCATATA+AGG + chr4_3:42139739-42139758 None:intergenic 35.0%
TGGAAGCAAGTGTTACATAT+TGG - chr4_3:42139791-42139810 Msa0641510:intron 35.0%
AGTATTCAATACCAGAACCA+AGG - chr4_3:42139900-42139919 Msa0641510:intron 35.0%
TGAACAGATGTCTAAACATC+TGG + chr4_3:42139991-42140010 None:intergenic 35.0%
AGATGTTTAGACATCTGTTC+AGG - chr4_3:42139990-42140009 Msa0641510:intron 35.0%
CAAACAAATGACCTTTCATC+AGG - chr4_3:42140094-42140113 Msa0641510:intron 35.0%
TAGAATTGTGACCAGAAACA+AGG - chr4_3:42140392-42140411 Msa0641510:intron 35.0%
!! AACTAATCTTGCCTTGTTTC+TGG + chr4_3:42140406-42140425 None:intergenic 35.0%
CAAGGTTATACTCAAGTAGA+AGG - chr4_3:42140429-42140448 Msa0641510:intron 35.0%
! TTTTGCCTCTATTGCTAGAT+TGG - chr4_3:42140470-42140489 Msa0641510:intron 35.0%
!!! GAGTCCATAAGGTTACTTTT+GGG - chr4_3:42140492-42140511 Msa0641510:intron 35.0%
! CTAGGATCTATAAACCCTTT+TGG + chr4_3:42140610-42140629 None:intergenic 35.0%
ACACAATTTCTTGTCAACCA+AGG - chr4_3:42140709-42140728 Msa0641510:intron 35.0%
TTTCAAATTCTGACTGCATC+TGG + chr4_3:42140867-42140886 None:intergenic 35.0%
! GTCAGAATTTGAAATGAGTC+TGG - chr4_3:42140873-42140892 Msa0641510:CDS 35.0%
! GAATTTGAAATGAGTCTGGT+AGG - chr4_3:42140877-42140896 Msa0641510:CDS 35.0%
TGGTCTTCAAGTCAATCAAA+TGG - chr4_3:42140918-42140937 Msa0641510:CDS 35.0%
TATAGTGAAGAAGTTTGGCA+TGG - chr4_3:42140981-42141000 Msa0641510:CDS 35.0%
AAGAAGTTTGGCATGGATAA+TGG - chr4_3:42140988-42141007 Msa0641510:CDS 35.0%
AACTTCAAATGAGTAGTTGC+TGG + chr4_3:42141030-42141049 None:intergenic 35.0%
CCTACTGCAAAAGTTATATC+AGG + chr4_3:42141138-42141157 None:intergenic 35.0%
! CCTGATATAACTTTTGCAGT+AGG - chr4_3:42141135-42141154 Msa0641510:intron 35.0%
TGAGTAACATGGCTCATTAT+AGG + chr4_3:42141186-42141205 None:intergenic 35.0%
ACTCTCACAATGCAAATTCT+AGG - chr4_3:42141259-42141278 Msa0641510:intron 35.0%
TATAGAGGTTGCTTCTTTCT+AGG - chr4_3:42141339-42141358 Msa0641510:intron 35.0%
GCTATGTTGAATAGGATTCT+TGG + chr4_3:42141553-42141572 None:intergenic 35.0%
ACATACGTCATCACTTTATC+AGG - chr4_3:42141589-42141608 Msa0641510:intron 35.0%
CATACGTCATCACTTTATCA+GGG - chr4_3:42141590-42141609 Msa0641510:intron 35.0%
! TTGCTTAACATCTAAGGCTT+TGG + chr4_3:42141685-42141704 None:intergenic 35.0%
GAGGAGCTATAAACATTTAG+TGG - chr4_3:42141744-42141763 Msa0641510:intron 35.0%
CACAAAAAATACGTGCAACA+AGG + chr4_3:42141793-42141812 None:intergenic 35.0%
!!! TGTTGCACGTATTTTTTGTG+TGG - chr4_3:42141793-42141812 Msa0641510:intron 35.0%
!!! GTTGCACGTATTTTTTGTGT+GGG - chr4_3:42141794-42141813 Msa0641510:intron 35.0%
ATAGGATTACAGACTAGAGA+AGG + chr4_3:42141852-42141871 None:intergenic 35.0%
! GCACAATTTTGTGGCTAAAA+AGG - chr4_3:42141958-42141977 Msa0641510:intron 35.0%
! CAATTTTGTGGCTAAAAAGG+TGG - chr4_3:42141961-42141980 Msa0641510:intron 35.0%
ACTTCAGAGGCAGAAATAAA+TGG + chr4_3:42142010-42142029 None:intergenic 35.0%
! GTTTTCTGTGGATGTTATGA+TGG - chr4_3:42142028-42142047 Msa0641510:intron 35.0%
!!! CATAGGTTGTTATTTTGAGG+GGG - chr4_3:42142155-42142174 Msa0641510:intron 35.0%
TTAGAGGAGCTCAAAATGTT+TGG - chr4_3:42142198-42142217 Msa0641510:intron 35.0%
TCAAAATGTTTGGTAGGATG+TGG - chr4_3:42142208-42142227 Msa0641510:intron 35.0%
! CAATGGTTTTTCTTTTCACC+AGG - chr4_3:42142428-42142447 Msa0641510:intron 35.0%
CTAATAGAACTACTGCTTGT+GGG - chr4_3:42142480-42142499 Msa0641510:intron 35.0%
TCCGAAGAATAAACATAACC+AGG + chr4_3:42142527-42142546 None:intergenic 35.0%
TATTGGGGTGAAAAAAACCA+TGG - chr4_3:42142556-42142575 Msa0641510:intron 35.0%
TATAAAGGAAAAGCTCCAAG+TGG - chr4_3:42142584-42142603 Msa0641510:intron 35.0%
!!! CATTTTGTTTTCCTTCCACT+TGG + chr4_3:42142602-42142621 None:intergenic 35.0%
CAAGTGGAAGGAAAACAAAA+TGG - chr4_3:42142600-42142619 Msa0641510:intron 35.0%
!! GGATTGGTTAGATACTTGAA+TGG + chr4_3:42142645-42142664 None:intergenic 35.0%
! AAAAAGGATTAGCGATTGCA+GGG + chr4_3:42143548-42143567 None:intergenic 35.0%
! AAAAAAGGATTAGCGATTGC+AGG + chr4_3:42143547-42143566 None:intergenic 35.0%
GCAATTTACCAAAAATGGCA+TGG - chr4_3:42143207-42143226 Msa0641510:intron 35.0%
GCAATTTACCAAAAATGGCA+TGG + chr4_3:42143207-42143226 None:intergenic 35.0%
CGTCAGCAATTTACCAAAAA+TGG + chr4_3:42143468-42143487 None:intergenic 35.0%
!! TTTTTGGTAAATTGCTGACG+TGG - chr4_3:42143468-42143487 Msa0641510:intron 35.0%
AACTTTGCAGGGGAAAAAAA+AGG - chr4_3:42143532-42143551 Msa0641510:intron 35.0%
! AAAAAAGGATTAGCGATTGC+AGG - chr4_3:42143547-42143566 Msa0641510:intron 35.0%
! AAAAAGGATTAGCGATTGCA+GGG - chr4_3:42143548-42143567 Msa0641510:intron 35.0%
! GAGGAGTTTTCAAATCAAGT+AGG - chr4_3:42143678-42143697 Msa0641510:intron 35.0%
GTGTCGAGTGTATGTAATAT+CGG - chr4_3:42143904-42143923 Msa0641510:intron 35.0%
TGTCGAGTGTATGTAATATC+GGG - chr4_3:42143905-42143924 Msa0641510:intron 35.0%
TCAACTCTTTCTCTCTCTAA+TGG + chr4_3:42143956-42143975 None:intergenic 35.0%
GAGATTGATCAAAACCCATT+TGG - chr4_3:42143992-42144011 Msa0641510:intron 35.0%
CTAGTGGCATATGATTACTT+TGG + chr4_3:42144078-42144097 None:intergenic 35.0%
AAGTAATCATATGCCACTAG+AGG - chr4_3:42144078-42144097 Msa0641510:intron 35.0%
GAGGTTCAAATAGCACAAAT+TGG - chr4_3:42144107-42144126 Msa0641510:intron 35.0%
!! GGGACAGTGAACATTTTAAT+TGG - chr4_3:42144194-42144213 Msa0641510:intron 35.0%
TCTATCCTCAAACAATACCG+AGG - chr4_3:42139095-42139114 Msa0641510:three_prime_UTR 40.0%
ATCTTCCTCGGTATTGTTTG+AGG + chr4_3:42139103-42139122 None:intergenic 40.0%
! ATTGGCTTCATTACTCCAGA+AGG + chr4_3:42139382-42139401 None:intergenic 40.0%
!! GTTGGCTTTAGAAGTGATCT+TGG - chr4_3:42139471-42139490 Msa0641510:CDS 40.0%
!! CCATTTTGTTGGGGTGTTAT+AGG + chr4_3:42139567-42139586 None:intergenic 40.0%
CCTATAACACCCCAACAAAA+TGG - chr4_3:42139564-42139583 Msa0641510:CDS 40.0%
CAACCTATCATGTACACAAC+AGG - chr4_3:42139685-42139704 Msa0641510:intron 40.0%
AACCCTGTTGTGTACATGAT+AGG + chr4_3:42139691-42139710 None:intergenic 40.0%
TACCAGAACCAAGGTTGTTA+TGG - chr4_3:42139909-42139928 Msa0641510:intron 40.0%
TGTTATGGAGTCCATCAATG+TGG - chr4_3:42139924-42139943 Msa0641510:intron 40.0%
AGACTCATGTTCATTCACCT+GGG + chr4_3:42140031-42140050 None:intergenic 40.0%
TTCTTCTGAACCCTGATGAA+AGG + chr4_3:42140108-42140127 None:intergenic 40.0%
CACTTTATTGGATCTTCTGG+TGG + chr4_3:42140175-42140194 None:intergenic 40.0%
AGTTCAAGAGAAGTGAAGTG+TGG - chr4_3:42140295-42140314 Msa0641510:intron 40.0%
GTTCAAGAGAAGTGAAGTGT+GGG - chr4_3:42140296-42140315 Msa0641510:intron 40.0%
CTAATGACATTCATGCCTTC+TGG + chr4_3:42140336-42140355 None:intergenic 40.0%
! CAGAAGGCATGAATGTCATT+AGG - chr4_3:42140334-42140353 Msa0641510:intron 40.0%
! AAGGCAAGATTAGTTGCTCA+AGG - chr4_3:42140411-42140430 Msa0641510:intron 40.0%
TTATACTCAAGTAGAAGGGC+TGG - chr4_3:42140434-42140453 Msa0641510:intron 40.0%
TTGCTAGATTGGAGTCCATA+AGG - chr4_3:42140481-42140500 Msa0641510:intron 40.0%
!! GGAGTCCATAAGGTTACTTT+TGG - chr4_3:42140491-42140510 Msa0641510:intron 40.0%
CACTCCCAAAAGTAACCTTA+TGG + chr4_3:42140499-42140518 None:intergenic 40.0%
!!! CATAAGGTTACTTTTGGGAG+TGG - chr4_3:42140497-42140516 Msa0641510:intron 40.0%
AGACACTCTTAACATCCATC+TGG + chr4_3:42140548-42140567 None:intergenic 40.0%
! TAGACATGATTCGGAAAGCT+AGG + chr4_3:42140628-42140647 None:intergenic 40.0%
TAAAGCATACACCTAGAGCA+TGG - chr4_3:42140674-42140693 Msa0641510:intron 40.0%
! CAACAAGACCTTGTTTGTGA+AGG - chr4_3:42140750-42140769 Msa0641510:intron 40.0%
TGGTGGAATTTCGAACAAGA+TGG - chr4_3:42140825-42140844 Msa0641510:intron 40.0%
GGTGAGCTGAATTACTTTCT+TGG - chr4_3:42140898-42140917 Msa0641510:CDS 40.0%
! GCAGTTGTTCGTAACTTGTA+TGG - chr4_3:42141445-42141464 Msa0641510:intron 40.0%
TGAAAAATTGAGGGGCAAGT+TGG - chr4_3:42141707-42141726 Msa0641510:intron 40.0%
GAAAAATTGAGGGGCAAGTT+GGG - chr4_3:42141708-42141727 Msa0641510:intron 40.0%
CTAGGTGCTCAAAATATCCA+GGG + chr4_3:42141825-42141844 None:intergenic 40.0%
ACTAGGTGCTCAAAATATCC+AGG + chr4_3:42141826-42141845 None:intergenic 40.0%
ACATCCACAGAAAACTTCAG+AGG + chr4_3:42142023-42142042 None:intergenic 40.0%
!! GTGGATGTTATGATGGATGT+TGG - chr4_3:42142035-42142054 Msa0641510:intron 40.0%
TCTTGCATATGCTTGTGTTC+AGG - chr4_3:42142098-42142117 Msa0641510:intron 40.0%
CTTGCATATGCTTGTGTTCA+GGG - chr4_3:42142099-42142118 Msa0641510:intron 40.0%
TTGCATATGCTTGTGTTCAG+GGG - chr4_3:42142100-42142119 Msa0641510:intron 40.0%
AGGAGCTCAAAATGTTTGGT+AGG - chr4_3:42142202-42142221 Msa0641510:intron 40.0%
TGTTTGGTAGGATGTGGTAT+AGG - chr4_3:42142214-42142233 Msa0641510:intron 40.0%
! CCACAAGCAGTAGTTCTATT+AGG + chr4_3:42142482-42142501 None:intergenic 40.0%
CCTAATAGAACTACTGCTTG+TGG - chr4_3:42142479-42142498 Msa0641510:intron 40.0%
TGCAATATATACCTGAGGTG+TGG + chr4_3:42142675-42142694 None:intergenic 40.0%
TGTTATTCGTCCCTGCAAAT+AGG - chr4_3:42143076-42143095 Msa0641510:intron 40.0%
GTTATTCGTCCCTGCAAATA+GGG - chr4_3:42143077-42143096 Msa0641510:intron 40.0%
TTATTCGTCCCTGCAAATAG+GGG - chr4_3:42143078-42143097 Msa0641510:intron 40.0%
CTTTGCAGGGGCAAAAAAAA+AGG + chr4_3:42143136-42143155 None:intergenic 40.0%
TGATGTGGCAGTGATTAACT+GGG + chr4_3:42143187-42143206 None:intergenic 40.0%
!!! GTCAATTCCCATGCCATTTT+TGG + chr4_3:42143452-42143471 None:intergenic 40.0%
!!! GTCAATTCCCATGCCATTTT+TGG - chr4_3:42143452-42143471 Msa0641510:intron 40.0%
TCCAAGAATCACTATGGGAA+TGG - chr4_3:42144173-42144192 Msa0641510:intron 40.0%
CCAAGAATCACTATGGGAAT+GGG - chr4_3:42144174-42144193 Msa0641510:intron 40.0%
TCCTAATTAACTCCAGCTCA+TGG - chr4_3:42144217-42144236 Msa0641510:intron 40.0%
ACCATGAGCTGGAGTTAATT+AGG + chr4_3:42144221-42144240 None:intergenic 40.0%
TAATTAACTCCAGCTCATGG+TGG - chr4_3:42144220-42144239 Msa0641510:intron 40.0%
AATTAACTCCAGCTCATGGT+GGG - chr4_3:42144221-42144240 Msa0641510:intron 40.0%
AGTCGTGTTTATACTTGACG+GGG + chr4_3:42144261-42144280 None:intergenic 40.0%
GAGTCGTGTTTATACTTGAC+GGG + chr4_3:42144262-42144281 None:intergenic 40.0%
CGAGTCGTGTTTATACTTGA+CGG + chr4_3:42144263-42144282 None:intergenic 40.0%
TACACAACAGGGTTACTCTG+AGG - chr4_3:42139697-42139716 Msa0641510:intron 45.0%
TGGCAGATAGAGAACACAGA+AGG - chr4_3:42139811-42139830 Msa0641510:intron 45.0%
ATTGATCCCCAAGAGTGATG+AGG - chr4_3:42139837-42139856 Msa0641510:intron 45.0%
TTGATCCCCAAGAGTGATGA+GGG - chr4_3:42139838-42139857 Msa0641510:intron 45.0%
AAGATCCCCTCATCACTCTT+GGG + chr4_3:42139847-42139866 None:intergenic 45.0%
CTCCATAACAACCTTGGTTC+TGG + chr4_3:42139914-42139933 None:intergenic 45.0%
! GATGGACTCCATAACAACCT+TGG + chr4_3:42139920-42139939 None:intergenic 45.0%
GGAAACAAATCCATCTACCC+AGG - chr4_3:42140011-42140030 Msa0641510:intron 45.0%
TGTTCATTCACCTGGGTAGA+TGG + chr4_3:42140024-42140043 None:intergenic 45.0%
CAGACTCATGTTCATTCACC+TGG + chr4_3:42140032-42140051 None:intergenic 45.0%
GAGAAGTGAAGTGTGGGATT+TGG - chr4_3:42140302-42140321 Msa0641510:intron 45.0%
! GATTTGGTAGCAAGACCAGA+AGG - chr4_3:42140318-42140337 Msa0641510:intron 45.0%
GGACTCCAATCTAGCAATAG+AGG + chr4_3:42140478-42140497 None:intergenic 45.0%
AGTCTCTCATACCATGCTCT+AGG + chr4_3:42140688-42140707 None:intergenic 45.0%
GTCAACCAAGGCTACAGAAA+AGG - chr4_3:42140721-42140740 Msa0641510:intron 45.0%
AACCAAGGCTACAGAAAAGG+TGG - chr4_3:42140724-42140743 Msa0641510:intron 45.0%
! TTCCACCTTTTCTGTAGCCT+TGG + chr4_3:42140729-42140748 None:intergenic 45.0%
CAAATTCTGACTGCATCTGG+TGG + chr4_3:42140864-42140883 None:intergenic 45.0%
TTGGTTACCGTGATGTTGAC+TGG - chr4_3:42141286-42141305 Msa0641510:intron 45.0%
! TGGTTACCGTGATGTTGACT+GGG - chr4_3:42141287-42141306 Msa0641510:intron 45.0%
TATCTGCCCAGTCAACATCA+CGG + chr4_3:42141296-42141315 None:intergenic 45.0%
CAGGGATCTTGTTGAAGAGA+AGG - chr4_3:42141608-42141627 Msa0641510:intron 45.0%
GCTTGAACATGTTGCTACAG+AGG - chr4_3:42141638-42141657 Msa0641510:intron 45.0%
!!! TCTGCCTCTGAAGTTTTCTG+TGG - chr4_3:42142016-42142035 Msa0641510:intron 45.0%
TGCATATGCTTGTGTTCAGG+GGG - chr4_3:42142101-42142120 Msa0641510:intron 45.0%
AGGTCAAGAGAGAGAAGCAA+GGG - chr4_3:42142448-42142467 Msa0641510:intron 45.0%
GAACTACTGCTTGTGGGTAT+TGG - chr4_3:42142486-42142505 Msa0641510:intron 45.0%
!! TACTGCTTGTGGGTATTGGA+AGG - chr4_3:42142490-42142509 Msa0641510:intron 45.0%
AAGGAAAAGCTCCAAGTGGA+AGG - chr4_3:42142588-42142607 Msa0641510:intron 45.0%
TTAAGCGACCCCTATTTGCA+GGG + chr4_3:42143579-42143598 None:intergenic 45.0%
TTTAAGCGACCCCTATTTGC+AGG + chr4_3:42143578-42143597 None:intergenic 45.0%
GCAGTGATTAACTGGGTCAA+AGG + chr4_3:42143490-42143509 None:intergenic 45.0%
CTGATGTGGCAGTGATTAAC+TGG + chr4_3:42143188-42143207 None:intergenic 45.0%
GGAATTGACGAAAATACCCC+TGG - chr4_3:42143229-42143248 Msa0641510:intron 45.0%
GGAATTGACGAAAATACCCC+TGG + chr4_3:42143229-42143248 None:intergenic 45.0%
TGACGTGGCAGTGATTAACT+GGG - chr4_3:42143483-42143502 Msa0641510:intron 45.0%
GCAGTGATTAACTGGGTCAA+AGG - chr4_3:42143490-42143509 Msa0641510:intron 45.0%
TTTAAGCGACCCCTATTTGC+AGG - chr4_3:42143578-42143597 Msa0641510:intron 45.0%
TTAAGCGACCCCTATTTGCA+GGG - chr4_3:42143579-42143598 Msa0641510:intron 45.0%
TGATTCGTCCCTGCAAATAG+GGG + chr4_3:42143590-42143609 None:intergenic 45.0%
GTGATTCGTCCCTGCAAATA+GGG + chr4_3:42143591-42143610 None:intergenic 45.0%
TGTGATTCGTCCCTGCAAAT+AGG + chr4_3:42143592-42143611 None:intergenic 45.0%
GAGTAGATGTGGCACCAAAT+GGG + chr4_3:42144009-42144028 None:intergenic 45.0%
TGAGTAGATGTGGCACCAAA+TGG + chr4_3:42144010-42144029 None:intergenic 45.0%
TGCATCCTGATGAGTAGATG+TGG + chr4_3:42144020-42144039 None:intergenic 45.0%
CATATGCCACTAGAGGTTGT+AGG - chr4_3:42144085-42144104 Msa0641510:intron 45.0%
CCCATTCCCATAGTGATTCT+TGG + chr4_3:42144177-42144196 None:intergenic 45.0%
!! AAAAATTGTAAAAAAAAATT+CGG + chr4_3:42143297-42143316 None:intergenic 5.0%
!!! TTAAAAATCATAAAAAATTT+TGG + chr4_3:42143369-42143388 None:intergenic 5.0%
!! AACAGGGTTACTCTGAGGTC+TGG - chr4_3:42139702-42139721 Msa0641510:intron 50.0%
TGATCCCCAAGAGTGATGAG+GGG - chr4_3:42139839-42139858 Msa0641510:intron 50.0%
AGATCCCCTCATCACTCTTG+GGG + chr4_3:42139846-42139865 None:intergenic 50.0%
GAAGATCCCCTCATCACTCT+TGG + chr4_3:42139848-42139867 None:intergenic 50.0%
AGAAACTAAGCAGGCTGAGC+AGG - chr4_3:42140059-42140078 Msa0641510:intron 50.0%
CTGGACTGATGCAATGCAAG+AGG - chr4_3:42140263-42140282 Msa0641510:intron 50.0%
AGGGGTTTGTGCAAGATACC+AGG - chr4_3:42141155-42141174 Msa0641510:intron 50.0%
GGCTCATTATAGGTTCAGCC+TGG + chr4_3:42141176-42141195 None:intergenic 50.0%
GGGCAGATAGTGCAGATGAT+AGG - chr4_3:42141307-42141326 Msa0641510:intron 50.0%
! GTTGGGAACTTGCTTGCATG+AGG - chr4_3:42141725-42141744 Msa0641510:intron 50.0%
!! TTTTTGTGTGGGCTAAGCCC+TGG - chr4_3:42141805-42141824 Msa0641510:intron 50.0%
! CAGACTAGAGAAGGCACACT+AGG + chr4_3:42141843-42141862 None:intergenic 50.0%
CTTGCTTCTCTCTCTTGACC+TGG + chr4_3:42142449-42142468 None:intergenic 50.0%
CAGGTCAAGAGAGAGAAGCA+AGG - chr4_3:42142447-42142466 Msa0641510:intron 50.0%
GGTCAAGAGAGAGAAGCAAG+GGG - chr4_3:42142449-42142468 Msa0641510:intron 50.0%
AAGAGAGAGAAGCAAGGGGA+GGG - chr4_3:42142453-42142472 Msa0641510:intron 50.0%
!! TGTGGGTATTGGAAGGCAAC+AGG - chr4_3:42142497-42142516 Msa0641510:intron 50.0%
CTGACGTGGCAGTGATTAAC+TGG - chr4_3:42143482-42143501 Msa0641510:intron 50.0%
!! TGGTGCCACATCTACTCATC+AGG - chr4_3:42144012-42144031 Msa0641510:intron 50.0%
ATGCCACTAGAGGTTGTAGG+AGG - chr4_3:42144088-42144107 Msa0641510:intron 50.0%
GAACCTCCTACAACCTCTAG+TGG + chr4_3:42144094-42144113 None:intergenic 50.0%
TTGAGTATCCCACCATGAGC+TGG + chr4_3:42144232-42144251 None:intergenic 50.0%
CAAGAGAGAGAAGCAAGGGG+AGG - chr4_3:42142452-42142471 Msa0641510:intron 55.0%
TGGAAGGCAACAGGTTCTCC+TGG - chr4_3:42142506-42142525 Msa0641510:intron 55.0%
! GAGGTGTGGCAGTGTTGGAT+TGG + chr4_3:42142661-42142680 None:intergenic 55.0%
ATCCAACACTGCCACACCTC+AGG - chr4_3:42142661-42142680 Msa0641510:intron 55.0%
TACCTGAGGTGTGGCAGTGT+TGG + chr4_3:42142666-42142685 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 42139029 42144498 42139029 ID=Msa0641510;Name=Msa0641510
chr4_3 mRNA 42139029 42144498 42139029 ID=Msa0641510-mRNA-1;Parent=Msa0641510;Name=Msa0641510-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.5|0.33|0.66|1|1|3|276|192
chr4_3 exon 42139029 42139643 42139029 ID=Msa0641510-mRNA-1:exon:9483;Parent=Msa0641510-mRNA-1
chr4_3 exon 42140845 42141077 42140845 ID=Msa0641510-mRNA-1:exon:9482;Parent=Msa0641510-mRNA-1
chr4_3 exon 42144492 42144498 42144492 ID=Msa0641510-mRNA-1:exon:9481;Parent=Msa0641510-mRNA-1
chr4_3 CDS 42144492 42144498 42144492 ID=Msa0641510-mRNA-1:cds;Parent=Msa0641510-mRNA-1
chr4_3 CDS 42140845 42141077 42140845 ID=Msa0641510-mRNA-1:cds;Parent=Msa0641510-mRNA-1
chr4_3 CDS 42139305 42139643 42139305 ID=Msa0641510-mRNA-1:cds;Parent=Msa0641510-mRNA-1
chr4_3 three_prime_UTR 42139029 42139304 42139029 ID=Msa0641510-mRNA-1:three_prime_utr;Parent=Msa0641510-mRNA-1
Gene Sequence

>Msa0641510

ATGACAGGTCAAGAGAGAGAAGCAAGGGGAGGGAGACCTAATAGAACTACTGCTTGTGGGTATTGGAAGGCAACAGGTTCTCCTGGTTATGTTTATTCTTCGGATAACAAAGTTATTGGGGTGAAAAAAACCATGGTGTTCTATAAAGGAAAAGCTCCAAGTGGAAGGAAAACAAAATGGAAGATGAATGAATACAGAGCCATTCAAGTATCTAACCAATCCAACACTGCCACACCTCAGTTGAGGAGAGAATTCAGTTTGTGTCGAGTGTATGTAATATCGGGAAGCTTTCGAGCATTTGATAGACGTCCATTAGAGAGAGAAAGAGTTGATCAATTACGGGTTAATGAGATTGATCAAAACCCATTTGGTGCCACATCTACTCATCAGGATGCAACAAGTTCATTTGAAATTTCTCAATTAGGGGGACTCCAAAGTAATCATATGCCACTAGAGGTTGTAGGAGGTTCAAATAGCACAAATTGGCATGTAAATAGTAACAATGAAAATAATGGTGATGAGGTTCAATTCCAAGAATCACTATGGGAATGGGACAGTGAACATTTTAATTGGTCCTAA
Protein sequence

>Msa0641510

MTGQEREARGGRPNRTTACGYWKATGSPGYVYSSDNKVIGVKKTMVFYKGKAPSGRKTKWKMNEYRAIQVSNQSNTATPQLRREFSLCRVYVISGSFRAFDRRPLERERVDQLRVNEIDQNPFGATSTHQDATSSFEISQLGGLQSNHMPLEVVGGSNSTNWHVNSNNENNGDEVQFQESLWEWDSEHFNWS*