AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0644540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644540 MtrunA17_Chr4g0031821 95.828 767 32 0 1 767 1 767 0.0 1481
Msa0644540 MtrunA17_Chr7g0260601 72.006 693 145 7 117 772 14 694 0.0 975
Msa0644540 MtrunA17_Chr7g0248361 71.186 649 154 8 126 769 23 643 0.0 906
Msa0644540 MtrunA17_Chr6g0476861 69.337 649 142 8 126 757 28 636 0.0 872
Msa0644540 MtrunA17_Chr3g0094871 75.831 451 90 5 315 761 6 441 0.0 690
Msa0644540 MtrunA17_Chr1g0168321 63.811 572 115 7 126 696 23 503 0.0 690
Msa0644540 MtrunA17_Chr3g0143721 48.458 454 216 6 320 759 249 698 8.59e-143 436
Msa0644540 MtrunA17_Chr2g0297281 47.991 448 218 8 320 757 286 728 3.02e-132 410
Msa0644540 MtrunA17_Chr4g0052411 48.222 450 215 9 320 757 229 672 1.43e-131 407
Msa0644540 MtrunA17_Chr7g0217421 52.747 364 164 6 311 671 30 388 5.09e-124 377
Msa0644540 MtrunA17_Chr3g0135721 42.672 464 246 9 311 768 215 664 9.61e-113 358
Msa0644540 MtrunA17_Chr5g0429571 45.175 456 228 10 293 728 284 737 1.72e-112 360
Msa0644540 MtrunA17_Chr3g0135761 41.026 507 271 10 276 771 178 667 3.38e-112 356
Msa0644540 MtrunA17_Chr1g0158881 40.820 512 278 9 254 758 262 755 1.11e-110 354
Msa0644540 MtrunA17_Chr8g0362771 39.789 475 267 7 304 771 221 683 2.03e-109 350
Msa0644540 MtrunA17_Chr3g0104211 48.549 379 186 4 320 690 304 681 1.16e-106 344
Msa0644540 MtrunA17_Chr5g0432631 40.541 481 257 10 275 748 194 652 7.84e-103 336
Msa0644540 MtrunA17_Chr5g0432641 38.961 462 261 9 311 764 182 630 6.60e-93 304
Msa0644540 MtrunA17_Chr8g0388371 34.630 514 278 12 302 773 389 886 2.71e-80 276
Msa0644540 MtrunA17_Chr2g0331161 39.732 448 242 11 320 757 415 844 2.23e-79 273
Msa0644540 MtrunA17_Chr6g0456351 50.000 272 132 1 311 582 308 575 3.05e-79 266
Msa0644540 MtrunA17_Chr3g0129971 34.292 487 283 11 303 770 279 747 1.38e-70 248
Msa0644540 MtrunA17_Chr8g0345461 40.377 265 154 3 309 572 154 415 1.71e-55 196
Msa0644540 MtrunA17_Chr1g0182711 43.725 247 135 3 322 567 190 433 3.29e-55 196
Msa0644540 MtrunA17_Chr7g0262801 43.725 247 135 3 322 567 189 432 1.24e-54 194
Msa0644540 MtrunA17_Chr4g0050561 40.078 257 151 2 325 580 161 415 1.51e-54 194
Msa0644540 MtrunA17_Chr3g0135781 51.099 182 79 2 304 482 39 213 5.52e-54 185
Msa0644540 MtrunA17_Chr1g0200081 40.000 265 154 4 309 572 164 424 2.39e-53 191
Msa0644540 MtrunA17_Chr1g0192151 40.329 243 141 3 322 563 169 408 1.02e-51 186
Msa0644540 MtrunA17_Chr4g0014731 40.329 243 141 3 322 563 170 409 1.14e-51 186
Msa0644540 MtrunA17_Chr8g0392971 82.353 102 18 0 532 633 51 152 1.16e-51 177
Msa0644540 MtrunA17_Chr8g0392981 73.729 118 29 1 642 757 1 118 5.04e-51 174
Msa0644540 MtrunA17_Chr7g0255721 41.434 251 140 4 319 566 684 930 1.01e-49 189
Msa0644540 MtrunA17_Chr7g0255721 40.092 217 123 3 351 566 416 626 1.16e-31 132
Msa0644540 MtrunA17_Chr8g0357301 29.103 457 263 13 337 745 487 930 3.43e-49 187
Msa0644540 MtrunA17_Chr5g0432391 30.493 446 230 12 312 748 48 422 5.08e-49 179
Msa0644540 MtrunA17_Chr7g0255641 39.764 254 140 5 319 566 657 903 1.09e-48 186
Msa0644540 MtrunA17_Chr7g0255641 40.513 195 107 5 358 551 432 618 6.21e-30 127
Msa0644540 MtrunA17_Chr3g0108321 43.137 204 114 2 305 507 144 346 2.84e-48 175
Msa0644540 MtrunA17_Chr2g0327121 42.975 242 129 4 309 548 196 430 4.46e-48 182
Msa0644540 MtrunA17_Chr2g0327121 42.735 234 122 5 320 548 480 706 8.91e-47 179
Msa0644540 MtrunA17_Chr7g0255651 41.558 231 131 3 319 548 281 508 2.00e-47 177
Msa0644540 MtrunA17_Chr7g0255651 30.317 221 135 5 339 548 29 241 2.88e-19 92.4
Msa0644540 MtrunA17_Chr1g0180791 42.424 231 127 4 320 548 478 704 2.95e-47 180
Msa0644540 MtrunA17_Chr1g0180791 42.000 250 135 5 301 548 187 428 1.19e-46 178
Msa0644540 MtrunA17_Chr3g0145011 39.113 248 147 3 320 566 139 383 4.70e-47 172
Msa0644540 MtrunA17_Chr7g0264521 42.358 229 126 4 322 548 481 705 4.74e-47 179
Msa0644540 MtrunA17_Chr7g0264521 41.365 249 138 5 301 548 188 429 2.32e-46 177
Msa0644540 MtrunA17_Chr3g0141901 39.113 248 147 3 320 566 136 380 9.17e-47 171
Msa0644540 MtrunA17_Chr2g0277831 41.880 234 120 4 322 548 245 469 2.55e-41 162
Msa0644540 MtrunA17_Chr2g0277831 39.035 228 134 3 320 546 533 756 2.98e-41 162
Msa0644540 MtrunA17_Chr7g0255691 38.462 247 146 4 319 562 285 528 2.71e-40 156
Msa0644540 MtrunA17_Chr7g0255691 35.000 260 133 9 325 562 22 267 5.70e-27 116
Msa0644540 MtrunA17_Chr7g0255901 36.797 231 141 4 320 548 639 866 1.86e-39 157
Msa0644540 MtrunA17_Chr2g0321241 41.410 227 119 8 317 539 129 345 4.74e-37 144
Msa0644540 MtrunA17_Chr4g0026631 41.410 227 119 8 317 539 124 340 6.71e-37 144
Msa0644540 MtrunA17_Chr4g0033451 32.861 353 201 10 235 566 292 629 1.14e-36 149
Msa0644540 MtrunA17_Chr8g0387641 36.207 232 138 5 320 548 521 745 3.97e-36 146
Msa0644540 MtrunA17_Chr1g0190401 23.024 582 361 10 270 767 606 1184 5.67e-36 146
Msa0644540 MtrunA17_Chr3g0135791 32.258 248 162 4 527 771 19 263 1.30e-35 137
Msa0644540 MtrunA17_Chr4g0043381 35.398 226 139 4 322 546 839 1058 1.89e-35 145
Msa0644540 MtrunA17_Chr3g0086411 35.897 273 145 7 320 566 215 483 3.46e-35 140
Msa0644540 MtrunA17_Chr3g0086411 36.667 150 78 3 407 546 7 149 2.03e-18 89.4
Msa0644540 MtrunA17_Chr3g0086401 34.146 287 151 7 320 575 385 664 1.82e-34 140
Msa0644540 MtrunA17_Chr3g0086401 35.841 226 123 5 322 535 94 309 7.52e-32 132
Msa0644540 MtrunA17_Chr4g0004121 33.535 331 184 11 290 593 208 529 2.51e-34 138
Msa0644540 MtrunA17_Chr6g0462581 36.638 232 136 6 320 548 500 723 4.55e-34 140
Msa0644540 MtrunA17_Chr2g0327231 43.195 169 92 3 314 480 340 506 5.12e-34 137
Msa0644540 MtrunA17_Chr2g0327231 37.000 100 60 1 309 408 142 238 3.44e-12 69.7
Msa0644540 MtrunA17_Chr4g0038101 35.931 231 131 7 320 543 721 941 1.86e-33 138
Msa0644540 MtrunA17_Chr5g0397121 35.345 232 140 5 320 548 513 737 4.64e-33 137
Msa0644540 MtrunA17_Chr4g0052271 37.975 237 138 7 320 554 119 348 3.19e-32 129
Msa0644540 MtrunA17_Chr1g0204031 36.752 234 136 7 319 548 556 781 3.30e-32 134
Msa0644540 MtrunA17_Chr1g0202371 36.957 230 128 8 320 543 397 615 5.69e-32 132
Msa0644540 MtrunA17_Chr2g0316851 32.946 258 160 5 299 548 571 823 9.19e-32 134
Msa0644540 MtrunA17_Chr1g0195731 36.052 233 138 6 320 548 934 1159 1.30e-31 132
Msa0644540 MtrunA17_Chr3g0127431 34.728 239 132 9 320 548 84 308 2.96e-31 127
Msa0644540 MtrunA17_Chr3g0127401 36.402 239 128 9 320 548 81 305 3.10e-31 126
Msa0644540 MtrunA17_Chr1g0202381 35.371 229 136 6 319 543 467 687 4.58e-31 130
Msa0644540 MtrunA17_Chr1g0195741 35.622 233 139 6 320 548 938 1163 5.20e-31 131
Msa0644540 MtrunA17_Chr4g0047411 36.546 249 128 7 345 567 202 446 4.30e-30 127
Msa0644540 MtrunA17_Chr3g0116131 35.526 228 136 6 320 543 902 1122 4.84e-30 127
Msa0644540 MtrunA17_Chr6g0459561 36.364 231 131 7 320 544 382 602 5.59e-28 120
Msa0644540 MtrunA17_Chr7g0246111 33.333 243 129 8 320 548 212 435 1.44e-27 117
Msa0644540 MtrunA17_Chr6g0459541 31.746 252 139 7 320 544 42 287 3.47e-25 107
Msa0644540 MtrunA17_Chr2g0289231 32.510 243 131 8 316 542 293 518 1.14e-23 106
Msa0644540 MtrunA17_Chr6g0459551 36.667 210 114 10 312 515 96 292 7.94e-21 96.3
Msa0644540 MtrunA17_Chr3g0135741 36.508 126 78 2 523 647 13 137 2.46e-17 79.7
Msa0644540 MtrunA17_Chr5g0432671 39.048 105 59 2 523 627 3 102 2.44e-15 72.8
Msa0644540 MtrunA17_Chr4g0062081 42.857 77 42 2 324 398 11 87 2.51e-13 66.6
Msa0644540 MtrunA17_Chr6g0459531 26.718 262 146 10 292 544 36 260 6.76e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644540 AT1G07510.1 74.870 772 176 7 1 761 1 765 0.0 1142
Msa0644540 AT2G29080.1 73.705 772 178 12 1 761 4 761 0.0 1082
Msa0644540 AT1G50250.1 48.678 454 215 7 320 759 259 708 3.73e-142 435
Msa0644540 AT5G42270.1 46.983 464 228 6 310 759 237 696 1.59e-138 426
Msa0644540 AT1G06430.1 48.552 449 214 9 320 757 217 659 2.31e-132 409
Msa0644540 AT1G06430.3 48.552 449 214 9 320 757 217 659 2.31e-132 409
Msa0644540 AT1G06430.2 48.552 449 214 9 320 757 217 659 2.31e-132 409
Msa0644540 AT2G30950.4 48.107 449 216 9 320 757 228 670 1.56e-131 407
Msa0644540 AT2G30950.1 48.107 449 216 9 320 757 224 666 1.74e-131 407
Msa0644540 AT2G30950.2 48.107 449 216 9 320 757 224 666 1.74e-131 407
Msa0644540 AT2G30950.3 48.107 449 216 9 320 757 224 666 1.74e-131 407
Msa0644540 AT5G15250.1 47.650 468 226 11 302 757 204 664 3.11e-131 406
Msa0644540 AT2G26140.1 42.369 498 259 12 276 761 180 661 9.63e-115 364
Msa0644540 AT5G53170.1 42.231 502 271 9 261 758 299 785 3.77e-114 365
Msa0644540 AT5G58870.1 46.512 430 213 6 320 733 326 754 3.29e-113 362
Msa0644540 AT3G47060.1 48.515 404 194 6 320 710 322 724 1.43e-111 358
Msa0644540 AT5G15250.2 51.266 316 126 5 302 594 204 514 1.44e-99 318
Msa0644540 AT3G02450.1 51.724 261 121 2 314 573 324 580 7.54e-80 268
Msa0644540 AT4G23940.1 34.908 487 267 11 302 747 412 889 9.13e-77 267
Msa0644540 AT3G16290.1 37.783 442 251 9 320 753 407 832 2.58e-74 259
Msa0644540 AT5G64580.1 34.969 489 282 11 303 772 296 767 4.14e-71 250
Msa0644540 AT1G53750.1 40.377 265 154 3 309 572 154 415 3.57e-55 196
Msa0644540 AT4G29040.1 43.725 247 135 3 322 567 187 430 5.02e-55 196
Msa0644540 AT5G19990.2 40.467 257 150 2 325 580 105 359 1.17e-54 192
Msa0644540 AT2G20140.1 43.725 247 135 3 322 567 187 430 2.34e-54 194
Msa0644540 AT5G19990.1 40.467 257 150 2 325 580 163 417 3.20e-54 193
Msa0644540 AT5G19990.3 40.467 257 150 2 325 580 163 417 3.20e-54 193
Msa0644540 AT5G20000.1 40.467 257 150 2 325 580 163 417 3.20e-54 193
Msa0644540 AT1G53780.3 39.623 265 156 3 309 572 325 586 1.68e-53 196
Msa0644540 AT1G53780.1 39.623 265 156 3 309 572 326 587 1.76e-53 196
Msa0644540 AT1G53780.4 39.623 265 156 3 309 572 326 587 1.76e-53 196
Msa0644540 AT1G53780.2 39.623 265 156 3 309 572 347 608 1.98e-53 196
Msa0644540 AT5G58290.1 38.911 257 153 3 305 560 137 390 1.16e-52 189
Msa0644540 AT3G05530.1 41.152 243 139 3 322 563 170 409 1.46e-52 189
Msa0644540 AT1G09100.1 40.329 243 141 3 322 563 169 408 2.63e-51 185
Msa0644540 AT1G79560.2 28.261 506 317 12 268 739 439 932 1.67e-50 191
Msa0644540 AT1G79560.1 28.261 506 317 12 268 739 439 932 1.89e-50 191
Msa0644540 AT1G79560.3 28.261 506 317 12 268 739 439 932 2.04e-50 191
Msa0644540 AT3G56690.1 40.637 251 142 4 319 566 720 966 3.32e-50 191
Msa0644540 AT3G56690.1 41.206 199 110 3 351 548 413 605 4.72e-35 144
Msa0644540 AT5G03340.1 41.991 231 128 4 320 548 477 703 1.97e-47 181
Msa0644540 AT5G03340.1 41.085 258 141 5 309 564 193 441 2.52e-46 178
Msa0644540 AT3G53230.1 42.424 231 127 4 320 548 478 704 2.24e-47 181
Msa0644540 AT3G53230.1 40.316 253 144 4 309 560 194 440 6.41e-46 177
Msa0644540 AT5G43010.1 38.710 248 148 3 320 566 136 380 3.17e-47 173
Msa0644540 AT1G45000.1 38.710 248 148 3 320 566 136 380 4.34e-47 172
Msa0644540 AT3G09840.1 41.085 258 141 5 309 564 193 441 3.42e-46 177
Msa0644540 AT3G09840.1 41.304 230 132 2 320 548 477 704 5.53e-46 177
Msa0644540 AT3G01610.1 41.810 232 112 6 322 539 232 454 2.64e-40 159
Msa0644540 AT3G01610.1 34.828 290 165 7 303 575 508 790 5.77e-35 143
Msa0644540 AT3G01610.2 41.810 232 112 6 322 539 232 454 2.98e-40 159
Msa0644540 AT3G01610.2 34.828 290 165 7 303 575 508 790 7.67e-35 142
Msa0644540 AT2G03670.1 36.032 247 153 3 319 562 282 526 1.15e-38 152
Msa0644540 AT2G03670.1 30.719 306 186 8 324 612 23 319 3.51e-31 130
Msa0644540 AT1G03000.1 37.069 232 139 5 320 548 655 882 3.85e-38 153
Msa0644540 AT1G05910.1 34.459 296 179 6 288 576 348 635 6.66e-38 153
Msa0644540 AT1G64110.1 34.843 287 172 7 320 598 513 792 7.14e-37 149
Msa0644540 AT1G64110.5 34.843 287 172 7 320 598 516 795 7.74e-37 149
Msa0644540 AT1G64110.3 34.843 287 172 7 320 598 516 795 7.74e-37 149
Msa0644540 AT1G64110.2 34.843 287 172 7 320 598 518 797 7.79e-37 149
Msa0644540 AT1G64110.4 34.843 287 172 7 320 598 518 797 7.79e-37 149
Msa0644540 AT5G08470.3 36.481 233 127 6 322 546 834 1053 1.78e-35 145
Msa0644540 AT5G08470.1 36.481 233 127 6 322 546 843 1062 1.92e-35 145
Msa0644540 AT3G04340.1 40.415 193 112 3 314 504 774 965 6.24e-35 144
Msa0644540 AT4G28000.3 35.776 232 138 5 320 548 517 740 6.92e-35 142
Msa0644540 AT4G28000.1 35.776 232 138 5 320 548 515 738 6.96e-35 143
Msa0644540 AT4G28000.2 35.776 232 138 5 320 548 517 740 7.78e-35 142
Msa0644540 AT2G27600.1 39.474 228 122 9 317 539 126 342 3.68e-34 136
Msa0644540 AT5G52882.1 36.017 236 132 6 320 548 514 737 1.44e-33 139
Msa0644540 AT3G15120.2 36.910 233 132 5 322 546 728 953 2.16e-33 139
Msa0644540 AT3G15120.1 36.910 233 132 5 322 546 718 943 2.36e-33 139
Msa0644540 AT4G02480.1 31.126 302 171 7 320 591 960 1254 3.96e-33 138
Msa0644540 AT1G80350.1 36.364 275 138 10 320 566 236 501 1.44e-32 133
Msa0644540 AT5G53540.1 36.864 236 131 8 320 548 84 308 3.48e-32 130
Msa0644540 AT2G03670.2 30.719 306 186 8 324 612 23 319 6.68e-32 129
Msa0644540 AT2G03670.2 39.286 140 84 1 319 457 282 421 7.41e-20 93.6
Msa0644540 AT1G50140.2 35.931 231 131 7 320 543 689 909 6.24e-31 130
Msa0644540 AT1G50140.5 35.931 231 131 7 320 543 689 909 6.24e-31 130
Msa0644540 AT1G50140.3 36.325 234 126 7 320 543 711 931 6.45e-31 130
Msa0644540 AT1G50140.1 36.325 234 126 7 320 543 711 931 6.45e-31 130
Msa0644540 AT1G50140.4 36.325 234 126 7 320 543 711 931 6.45e-31 130
Msa0644540 AT2G45500.4 34.137 249 139 9 309 548 71 303 9.46e-31 124
Msa0644540 AT2G45500.3 34.137 249 139 9 309 548 71 303 9.46e-31 124
Msa0644540 AT1G02890.1 29.801 302 175 7 320 591 941 1235 1.57e-30 130
Msa0644540 AT3G19740.1 35.965 228 135 7 320 543 701 921 3.07e-30 129
Msa0644540 AT4G27680.1 36.017 236 133 8 320 548 81 305 3.60e-30 124
Msa0644540 AT2G45500.2 34.137 249 139 9 309 548 204 436 4.65e-30 125
Msa0644540 AT2G45500.1 34.137 249 139 9 309 548 208 440 5.79e-30 125
Msa0644540 AT2G45500.5 34.137 249 139 9 309 548 214 446 6.25e-30 125
Msa0644540 AT2G34560.1 37.662 231 136 7 320 548 100 324 1.32e-29 122
Msa0644540 AT2G34560.2 37.662 231 136 7 320 548 109 333 1.60e-29 122
Msa0644540 AT4G04910.1 37.288 236 122 8 345 564 239 464 8.49e-29 123
Msa0644540 AT4G24860.1 34.211 228 139 6 320 543 817 1037 1.71e-27 120
Msa0644540 AT4G24860.3 34.211 228 139 6 320 543 815 1035 1.80e-27 120
Msa0644540 AT4G24860.4 34.211 228 139 6 320 543 790 1010 2.22e-27 119
Msa0644540 AT4G24860.2 34.211 228 139 6 320 543 813 1033 2.50e-27 119
Msa0644540 AT3G27120.1 35.931 231 132 7 320 544 400 620 2.60e-27 118
Msa0644540 AT4G04180.1 31.513 238 142 7 315 542 311 537 1.21e-25 112
Msa0644540 AT4G04180.2 31.513 238 142 7 315 542 306 532 1.28e-25 112
Msa0644540 AT1G62130.2 32.035 231 128 7 320 543 743 951 8.38e-24 108
Msa0644540 AT1G62130.1 32.035 231 128 7 320 543 750 958 8.72e-24 108
Msa0644540 AT1G45000.2 40.288 139 81 2 320 457 136 273 2.00e-23 102
Msa0644540 AT5G08470.2 35.526 152 87 4 322 469 843 987 8.17e-20 95.5
Msa0644540 AT1G02890.2 26.490 302 157 8 320 591 941 1207 2.27e-19 94.4

Find 214 sgRNAs with CRISPR-Local

Find 420 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCGCCAACCCTGTTGATTT+TGG 0.144951 4_3:+48458044 Msa0644540:CDS
TTTGGGAACTCTCTGGTTTA+TGG 0.154517 4_3:+48458062 Msa0644540:CDS
GCAAGATTGGGAACGCTTTA+TGG 0.172434 4_3:+48455498 Msa0644540:CDS
GTGCCATTTCTTTCCATATC+TGG 0.205745 4_3:+48458573 Msa0644540:CDS
TTTAAATATGTAATCAATAT+TGG 0.218480 4_3:+48457898 Msa0644540:CDS
TGAAACCATAGATGGCTATT+TGG 0.222849 4_3:-48460185 None:intergenic
CCAAGCTCTTCGTATTTCTT+AGG 0.226217 4_3:-48458462 None:intergenic
TATTGATTACATATTTAAAT+TGG 0.233644 4_3:-48457894 None:intergenic
CATATCTGGTTCTGATTTCA+TGG 0.234533 4_3:+48458587 Msa0644540:CDS
CTTCGCTGTCTGCTTGATTA+AGG 0.241757 4_3:-48457837 None:intergenic
CTCATCAATAAATACTATAC+TGG 0.248136 4_3:-48458676 None:intergenic
TGCTGTTGCAGGTTGGTTCT+TGG 0.252343 4_3:+48459672 Msa0644540:CDS
CAGGACAAAGGAGCAGCTTT+TGG 0.256747 4_3:+48459786 Msa0644540:CDS
TTCTCTGCAGATTAGTTTCC+AGG 0.261767 4_3:+48457723 Msa0644540:intron
AGAGTTCCTCACATATATTT+TGG 0.268782 4_3:-48457812 None:intergenic
CTCAAAATGACGACGCGTTT+GGG 0.272158 4_3:+48460235 Msa0644540:CDS
CCTCAAAATGACGACGCGTT+TGG 0.275529 4_3:+48460234 Msa0644540:CDS
GATGATGTTGAAAAGGGATT+AGG 0.281494 4_3:+48455546 Msa0644540:CDS
TCAAATAAATCTGAAATATC+TGG 0.292729 4_3:-48458929 None:intergenic
ATTGATGTACCTGACATTAA+AGG 0.319955 4_3:+48458900 Msa0644540:CDS
CGAGGCAAAGCAAGAAATTA+TGG 0.326964 4_3:+48458416 Msa0644540:CDS
AGATGACTTGGTTCGAATCT+TGG 0.333359 4_3:+48460413 Msa0644540:CDS
AGGAAAGTGCAAGGTGGATT+TGG 0.333587 4_3:+48458087 Msa0644540:CDS
CATGAAATCAGAACCAGATA+TGG 0.334227 4_3:-48458586 None:intergenic
TTGGGAACTCTCTGGTTTAT+GGG 0.337589 4_3:+48458063 Msa0644540:CDS
AAATCAATTGTTGGTGGAAA+TGG 0.339562 4_3:+48458770 Msa0644540:CDS
AATTCCAAAAGGTGCTCTTC+TGG 0.340894 4_3:+48458491 Msa0644540:CDS
TGGTGGTCGGGCTGCCGAGC+AGG 0.341124 4_3:+48459828 Msa0644540:CDS
GCCCTTACTCCAGGATTTGC+TGG 0.341796 4_3:+48459002 Msa0644540:CDS
CCTTTGCAGGAAGGGTTCCT+TGG 0.342572 4_3:-48457861 None:intergenic
TGTGGGTTCTGCACTCTTGA+AGG 0.349056 4_3:-48460444 None:intergenic
TCTGCCATAGCTCGTAATAA+TGG 0.355581 4_3:+48455591 Msa0644540:CDS
CGATAGGATCATTGGTGGTT+TGG 0.356353 4_3:+48459118 Msa0644540:CDS
ATGATGTTGAAAAGGGATTA+GGG 0.357188 4_3:+48455547 Msa0644540:CDS
GAAACCATAGATGGCTATTT+GGG 0.358295 4_3:-48460184 None:intergenic
CTGCCATAGCTCGTAATAAT+GGG 0.361252 4_3:+48455592 Msa0644540:CDS
TTGATCAGGAAGTGCGAGAT+TGG 0.371100 4_3:+48460289 Msa0644540:CDS
CAACAGCATGGCCTGCTTCA+TGG 0.372235 4_3:-48459657 None:intergenic
TGGCCACCAGATCCCTTTGC+AGG 0.378325 4_3:-48457874 None:intergenic
CCTCGCGGCACAGCAGCACT+TGG 0.379585 4_3:+48459730 Msa0644540:CDS
GAAATAGACTTTGATTAGCT+TGG 0.380375 4_3:-48460723 None:intergenic
TTTCTTTCATCCCTTTCTCT+TGG 0.380958 4_3:+48456344 Msa0644540:CDS
TGTTATATATTCTTCTGAAA+TGG 0.383217 4_3:+48457996 Msa0644540:CDS
GTTGCACGGTGAAGCAAGAT+TGG 0.387025 4_3:+48455485 Msa0644540:CDS
GGTTCTCACTAGGAACATAT+TGG 0.390805 4_3:-48459759 None:intergenic
TATATTCTTCTGAAATGGTT+TGG 0.391866 4_3:+48458001 Msa0644540:CDS
TTCGCTGTCTGCTTGATTAA+GGG 0.399007 4_3:-48457836 None:intergenic
AAAGCAACTGCAGGGGAGTC+TGG 0.399715 4_3:+48458549 Msa0644540:CDS
ACCCTTCCTGCAAAGGGATC+TGG 0.404556 4_3:+48457868 Msa0644540:CDS
TATGCCCAAATAGCCATCTA+TGG 0.410083 4_3:+48460180 Msa0644540:CDS
TTGATGCAATTGGTCGGAAA+AGG 0.411767 4_3:+48458700 Msa0644540:CDS
CCCACCAGAAGAGCACCTTT+TGG 0.413587 4_3:-48458495 None:intergenic
AGGGGTCGTGGAGGTTTCTC+TGG 0.415439 4_3:+48458720 Msa0644540:CDS
AGAGAGTTCCCAAAATCAAC+AGG 0.415902 4_3:-48458053 None:intergenic
AAACTATCTCACCCCATTGT+TGG 0.420910 4_3:+48456310 Msa0644540:CDS
AAACCATACAGTGGCGATAC+TGG 0.421037 4_3:+48460258 Msa0644540:CDS
GTGTTCTTCTATAAGCTGTA+TGG 0.421606 4_3:-48460334 None:intergenic
TTTATCGATGATGTTGAAAA+GGG 0.425225 4_3:+48455540 Msa0644540:CDS
AACTATGTGGGAACAACCTC+AGG 0.425530 4_3:-48460566 None:intergenic
TTGTATGACCCTTGGTGGTC+GGG 0.425818 4_3:+48459816 Msa0644540:CDS
TTCTGAAATGGTTTGGTACC+AGG 0.426278 4_3:+48458008 Msa0644540:CDS
GGTGGATTTGGTGTTGGTGG+TGG 0.427309 4_3:+48458099 Msa0644540:CDS
CAAGGTGGATTTGGTGTTGG+TGG 0.428799 4_3:+48458096 Msa0644540:CDS
GAAGCAGGCCATGCTGTTGC+AGG 0.430567 4_3:+48459661 Msa0644540:CDS
CTTAAATCTATCGTAATTTG+TGG 0.441735 4_3:-48460462 None:intergenic
TGGTGATATTTGTAGTTGTC+GGG 0.442556 4_3:-48455197 None:intergenic
ATGTCTGCTCCAGCAAATCC+TGG 0.444210 4_3:-48459011 None:intergenic
GTGGTTTGGAGAAGAAGAAC+AGG 0.451185 4_3:+48459132 Msa0644540:CDS
GAACCAGATATGGAAAGAAA+TGG 0.451853 4_3:-48458576 None:intergenic
ATGGTGATATTTGTAGTTGT+CGG 0.451906 4_3:-48455198 None:intergenic
GGTGTTGGTGGTGGCTCCAC+TGG 0.453849 4_3:+48458108 Msa0644540:CDS
CTCCAGCAAATCCTGGAGTA+AGG 0.456693 4_3:-48459004 None:intergenic
ATTTGTTGGAGACAACAATA+TGG 0.457579 4_3:-48457783 None:intergenic
AAGTACTTTAAATCAATTGT+TGG 0.458092 4_3:+48458761 Msa0644540:CDS
ATTTCAGAAGAATATATAAC+AGG 0.458585 4_3:-48457994 None:intergenic
TTAAATCTATCGTAATTTGT+GGG 0.460225 4_3:-48460461 None:intergenic
GTTCTCACTAGGAACATATT+GGG 0.461038 4_3:-48459758 None:intergenic
ATTGATGAGATTGATGCAAT+TGG 0.464604 4_3:+48458690 Msa0644540:CDS
TACTGGTAACATCATTGATC+AGG 0.465960 4_3:+48460275 Msa0644540:CDS
TCTCACCCCATTGTTGGTGG+TGG 0.465963 4_3:+48456316 Msa0644540:CDS
ATGGAAATGTTTGTCGGTGT+TGG 0.466679 4_3:+48458606 Msa0644540:CDS
CACTGGAGCACAAAATGACT+TGG 0.469816 4_3:+48460137 Msa0644540:CDS
ATAGTCCCACCACCAACAAT+GGG 0.471876 4_3:-48456322 None:intergenic
GAAGGAAGTGCCAAAGGGAG+AGG 0.474904 4_3:+48455837 Msa0644540:CDS
ACCAGATCCCTTTGCAGGAA+GGG 0.475185 4_3:-48457869 None:intergenic
GTGGGTTCTGCACTCTTGAA+GGG 0.475380 4_3:-48460443 None:intergenic
GATTTCATGGAAATGTTTGT+CGG 0.475383 4_3:+48458600 Msa0644540:CDS
CTCATTGGAGCAATCTCCAC+TGG 0.475680 4_3:+48460120 Msa0644540:CDS
TTGCACGGTGAAGCAAGATT+GGG 0.476061 4_3:+48455486 Msa0644540:CDS
TGATGCAATTGGTCGGAAAA+GGG 0.476507 4_3:+48458701 Msa0644540:CDS
ATTACGATAGATTTAAGCTA+GGG 0.479014 4_3:+48460468 Msa0644540:CDS
TTGGTGGAAATGGATGGTTT+TGG 0.480220 4_3:+48458780 Msa0644540:CDS
TTGTCGGTGTTGGACCATCC+AGG 0.481495 4_3:+48458616 Msa0644540:CDS
TATTTGGGCATATGTCATCT+TGG 0.483350 4_3:-48460169 None:intergenic
TGAAGACCCACCACCCTCCT+TGG 0.483888 4_3:-48460534 None:intergenic
CTCGCGGCACAGCAGCACTT+GGG 0.487871 4_3:+48459731 Msa0644540:CDS
GCTGGAGTTGTTGTGCTAGC+AGG 0.490258 4_3:+48458810 Msa0644540:CDS
TTACCAGTATCGCCACTGTA+TGG 0.491525 4_3:-48460261 None:intergenic
CTCCTTGGCTTCATCGACGA+TGG 0.491547 4_3:-48460519 None:intergenic
GATGAAGCCAAGGAGGGTGG+TGG 0.491766 4_3:+48460527 Msa0644540:three_prime_UTR
AGCCTTCATATTATTCTCAA+AGG 0.492433 4_3:+48458973 Msa0644540:CDS
TTCCTAGTGAGAACCTTCTC+AGG 0.496104 4_3:+48459767 Msa0644540:CDS
GCAGCTATCGATAGGATCAT+TGG 0.496191 4_3:+48459110 Msa0644540:CDS
GATCACGAGGACCAAGAGAA+AGG 0.498134 4_3:-48456355 None:intergenic
GCTGATATGGACAACTTGTA+CGG 0.500045 4_3:+48460644 Msa0644540:three_prime_UTR
AGATTCGAACCAAGTCATCT+TGG 0.500733 4_3:-48460410 None:intergenic
GACAACGCCTTACTTAGGCC+TGG 0.501131 4_3:+48458855 Msa0644540:CDS
GGAAAAGAAGGAAGTGCCAA+AGG 0.503043 4_3:+48455831 Msa0644540:CDS
TACTTTAAATCAATTGTTGG+TGG 0.503402 4_3:+48458764 Msa0644540:CDS
GATATGACTTGTATGACCCT+TGG 0.505273 4_3:+48459808 Msa0644540:CDS
CAAGGAACCCTTCCTGCAAA+GGG 0.510654 4_3:+48457862 Msa0644540:CDS
TGTCTAGGTAATAAGTAAGC+TGG 0.511471 4_3:+48459615 Msa0644540:intron
TGATCAGGAAGTGCGAGATT+GGG 0.511795 4_3:+48460290 Msa0644540:CDS
GAAAACATGCGATGAAGCCT+AGG 0.512524 4_3:-48455657 None:intergenic
AATCAATTGCTGCAAACCCT+AGG 0.513115 4_3:+48455640 Msa0644540:CDS
ACAATATGGTCTACTAATCC+TGG 0.514715 4_3:-48457769 None:intergenic
TCCAAAAGGTGCTCTTCTGG+TGG 0.519532 4_3:+48458494 Msa0644540:CDS
CTTGTATGACCCTTGGTGGT+CGG 0.520582 4_3:+48459815 Msa0644540:CDS
AAACCCATTATTACGAGCTA+TGG 0.521150 4_3:-48455595 None:intergenic
CCAAGGAACCCTTCCTGCAA+AGG 0.522628 4_3:+48457861 Msa0644540:CDS
AGGCTTGCAGCCCTTACTCC+AGG 0.523091 4_3:+48458993 Msa0644540:CDS
AATAGTCCCACCACCAACAA+TGG 0.523458 4_3:-48456323 None:intergenic
AAAACGCCCAGGCCTAAGTA+AGG 0.525242 4_3:-48458862 None:intergenic
CAAACATAAACTTAACTATG+TGG 0.526794 4_3:-48460579 None:intergenic
TCGCTGTCTGCTTGATTAAG+GGG 0.530649 4_3:-48457835 None:intergenic
ACCGTTGCTTACCATGAAGC+AGG 0.531277 4_3:+48459646 Msa0644540:CDS
ATCACGAGGACCAAGAGAAA+GGG 0.533495 4_3:-48456354 None:intergenic
AATTACGATAGATTTAAGCT+AGG 0.533611 4_3:+48460467 Msa0644540:CDS
ATTGGTCGGAAAAGGGGTCG+TGG 0.536073 4_3:+48458708 Msa0644540:CDS
CACCAGATCCCTTTGCAGGA+AGG 0.536420 4_3:-48457870 None:intergenic
CTCGGCAGCCCGACCACCAA+GGG 0.536999 4_3:-48459824 None:intergenic
GGTCGTGGAATATTTAACAT+TGG 0.540391 4_3:+48458138 Msa0644540:CDS
CCTAAGAAATACGAAGAGCT+TGG 0.541178 4_3:+48458462 Msa0644540:CDS
GAAACTTGTTTCACGAAGCA+AGG 0.542077 4_3:+48458643 Msa0644540:CDS
CGTATTTCTTAGGATTCTTG+AGG 0.544887 4_3:-48458452 None:intergenic
TCAAAGTCAAACACAGAGGA+TGG 0.545037 4_3:+48456251 Msa0644540:CDS
GTGCAAGGTGGATTTGGTGT+TGG 0.545995 4_3:+48458093 Msa0644540:CDS
TGGTCACGACCTTTAATGTC+AGG 0.547707 4_3:-48458909 None:intergenic
TGGTCCTCGTGATCAGCAGC+AGG 0.548339 4_3:+48456364 Msa0644540:CDS
AGGTAATAAGTAAGCTGGAA+AGG 0.548736 4_3:+48459620 Msa0644540:intron
AGCCTTTGAGAATAATATGA+AGG 0.549153 4_3:-48458975 None:intergenic
CTCACCCCATTGTTGGTGGT+GGG 0.551716 4_3:+48456317 Msa0644540:CDS
CTTGGTGCCAAAATTCCAAA+AGG 0.552017 4_3:+48458480 Msa0644540:CDS
TATTAGACAACGCCTTACTT+AGG 0.552358 4_3:+48458850 Msa0644540:CDS
AAACATAAACTTAACTATGT+GGG 0.552385 4_3:-48460578 None:intergenic
GCGCAAATCTCATTAACTCC+TGG 0.554538 4_3:-48458026 None:intergenic
CTATCTCACCCCATTGTTGG+TGG 0.556416 4_3:+48456313 Msa0644540:CDS
TAAGCTAGGGTTTCAAGATG+AGG 0.556661 4_3:+48460481 Msa0644540:exon
TTGAAGAAACAATGGTAACT+AGG 0.558174 4_3:-48455320 None:intergenic
CAGGCCATGCTGTTGCAGGT+TGG 0.560076 4_3:+48459665 Msa0644540:CDS
GCTGCTCCTTTGTCCTGAGA+AGG 0.560952 4_3:-48459780 None:intergenic
ACAACGCCTTACTTAGGCCT+GGG 0.561103 4_3:+48458856 Msa0644540:CDS
GAACTCTCTGGTTTATGGGA+AGG 0.561814 4_3:+48458067 Msa0644540:CDS
TCCACTGGTAAGAATGGTCG+TGG 0.570992 4_3:+48458123 Msa0644540:CDS
TCATCAATAAATACTATACT+GGG 0.572453 4_3:-48458675 None:intergenic
AGTACTTCACCAAGATGACT+TGG 0.572458 4_3:+48460401 Msa0644540:CDS
GAGGAAGCGCAAGAAGCACT+AGG 0.572888 4_3:+48457949 Msa0644540:CDS
GAAAAGAAGGAAGTGCCAAA+GGG 0.575045 4_3:+48455832 Msa0644540:CDS
GCTCGGCAGCCCGACCACCA+AGG 0.576079 4_3:-48459825 None:intergenic
TCCACGACCATTCTTACCAG+TGG 0.580385 4_3:-48458124 None:intergenic
AACAAGTTTCTCACCCTGGA+TGG 0.580706 4_3:-48458630 None:intergenic
TCCAGCAAATCCTGGAGTAA+GGG 0.580747 4_3:-48459003 None:intergenic
CCAAAAGGTGCTCTTCTGGT+GGG 0.582841 4_3:+48458495 Msa0644540:CDS
ATTTCGAGGCAGCTATCGAT+AGG 0.584687 4_3:+48459102 Msa0644540:CDS
AACCATCGTCGATGAAGCCA+AGG 0.587489 4_3:+48460517 Msa0644540:three_prime_UTR
GTTCCCAAAATCAACAGGGT+TGG 0.588353 4_3:-48458048 None:intergenic
ATCGTGCGGTCAAAACGCCC+AGG 0.591416 4_3:-48458873 None:intergenic
GTCTTCACCTCTAGAACCTG+AGG 0.592909 4_3:+48460550 Msa0644540:three_prime_UTR
ACAATAGTTACTTTCAACAA+TGG 0.594322 4_3:-48459706 None:intergenic
AGTCACAATGGATCATTTCG+AGG 0.595853 4_3:+48459088 Msa0644540:CDS
ATCATGCTTTGAAGAAACAA+TGG 0.598166 4_3:-48455328 None:intergenic
GGTGGCTCCACTGGTAAGAA+TGG 0.599960 4_3:+48458117 Msa0644540:CDS
ATGACTTGTATGACCCTTGG+TGG 0.602845 4_3:+48459811 Msa0644540:CDS
TGGTTTGGAGAAGAAGAACA+GGG 0.606026 4_3:+48459133 Msa0644540:CDS
AAAACATGCGATGAAGCCTA+GGG 0.607666 4_3:-48455656 None:intergenic
GTGAAACAAGTTTCTCACCC+TGG 0.608660 4_3:-48458634 None:intergenic
GCCTGCTTCATGGTAAGCAA+CGG 0.609319 4_3:-48459647 None:intergenic
CTTCCTGCAAAGGGATCTGG+TGG 0.609552 4_3:+48457871 Msa0644540:CDS
GATGCAATTGGTCGGAAAAG+GGG 0.610099 4_3:+48458702 Msa0644540:CDS
AAATGATGAAACAACCTGCT+CGG 0.612044 4_3:-48459842 None:intergenic
TGTCGGTGTTGGACCATCCA+GGG 0.613071 4_3:+48458617 Msa0644540:CDS
GTCCTGAGAAGGTTCTCACT+AGG 0.616189 4_3:-48459769 None:intergenic
GCTATCGATAGGATCATTGG+TGG 0.616670 4_3:+48459113 Msa0644540:CDS
ATGAAGCCAAGGAGGGTGGT+GGG 0.619072 4_3:+48460528 Msa0644540:three_prime_UTR
CAAGCAGACAGCGAAGTCCA+AGG 0.624939 4_3:+48457844 Msa0644540:CDS
CAATTGTTGGTGGAAATGGA+TGG 0.625755 4_3:+48458774 Msa0644540:CDS
CATCGTCGATGAAGCCAAGG+AGG 0.628464 4_3:+48460520 Msa0644540:three_prime_UTR
GAGAATAATATGAAGGCTCG+TGG 0.628614 4_3:-48458968 None:intergenic
GTCGATGAAGCCAAGGAGGG+TGG 0.631690 4_3:+48460524 Msa0644540:three_prime_UTR
ATGAGATTGATGCAATTGGT+CGG 0.631846 4_3:+48458694 Msa0644540:CDS
CTTACCTGCTGCTGATCACG+AGG 0.632040 4_3:-48456368 None:intergenic
GGAACAACCTCAGGTTCTAG+AGG 0.634295 4_3:-48460557 None:intergenic
AAGCTGCTCTGATTGCTGCA+AGG 0.638573 4_3:+48459051 Msa0644540:CDS
TGATGAATCACAAGTCACAA+TGG 0.642219 4_3:+48459076 Msa0644540:CDS
GGTCGGAAAAGGGGTCGTGG+AGG 0.642405 4_3:+48458711 Msa0644540:CDS
ATCGTCGATGAAGCCAAGGA+GGG 0.650482 4_3:+48460521 Msa0644540:three_prime_UTR
TAGCACAACAACTCCAGCAG+TGG 0.652358 4_3:-48458805 None:intergenic
AGAACCAACCTGCAACAGCA+TGG 0.654487 4_3:-48459669 None:intergenic
GTCATGTAGAATTTGTTGCA+CGG 0.655486 4_3:+48455471 Msa0644540:intron
ATGGGAAGGAAAGTGCAAGG+TGG 0.659337 4_3:+48458081 Msa0644540:CDS
TGAGAACCTTCTCAGGACAA+AGG 0.663177 4_3:+48459774 Msa0644540:CDS
AAGTCAAACACAGAGGATGG+AGG 0.663945 4_3:+48456254 Msa0644540:CDS
CCAAGTGCTGCTGTGCCGCG+AGG 0.668668 4_3:-48459730 None:intergenic
TTTAGCAAAAGCAACTGCAG+GGG 0.671935 4_3:+48458542 Msa0644540:CDS
GTACATCAATTGATATCGTG+CGG 0.677345 4_3:-48458887 None:intergenic
CAGTTGCCAAAATATATGTG+AGG 0.694454 4_3:+48457806 Msa0644540:CDS
AAAGTAACTATTGTTCCTCG+CGG 0.694758 4_3:+48459715 Msa0644540:CDS
ACAGCTTATAGAAGAACACA+AGG 0.695122 4_3:+48460338 Msa0644540:CDS
TTTATGGGAAGGAAAGTGCA+AGG 0.696455 4_3:+48458078 Msa0644540:CDS
AGATGTTGCTGGCTGTGACG+AGG 0.714294 4_3:+48458398 Msa0644540:CDS
GAGAGTTCCCAAAATCAACA+GGG 0.726423 4_3:-48458052 None:intergenic
TAGTCCCACCACCAACAATG+GGG 0.742812 4_3:-48456321 None:intergenic
TGAGTCAAAGTCAAACACAG+AGG 0.760960 4_3:+48456247 Msa0644540:CDS
GCGTTTGGGAAACCATACAG+TGG 0.770537 4_3:+48460249 Msa0644540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTATTAATGATTTTTAAT+TGG + chr4_3:48455448-48455467 Msa0644540:intron 10.0%
!!! TTATTTTAATTTTCTTATGT+GGG + chr4_3:48456423-48456442 Msa0644540:intron 10.0%
!!! TATTGATTACATATTTAAAT+TGG - chr4_3:48457897-48457916 None:intergenic 10.0%
!! TTTAAATATGTAATCAATAT+TGG + chr4_3:48457898-48457917 Msa0644540:CDS 10.0%
!! TTTAAAAATAAAAAACAAAC+AGG - chr4_3:48459173-48459192 None:intergenic 10.0%
!!! TTAAAATATAAAATGTTTTC+TGG + chr4_3:48459204-48459223 Msa0644540:intron 10.0%
!!! TAAAATATAAAATGTTTTCT+GGG + chr4_3:48459205-48459224 Msa0644540:intron 10.0%
!!! GTTATTTTAATTTTCTTATG+TGG + chr4_3:48456422-48456441 Msa0644540:intron 15.0%
!!! TATTTTAATTTTCTTATGTG+GGG + chr4_3:48456424-48456443 Msa0644540:intron 15.0%
!! ATAAGCTAATTTATTCAAAA+TGG - chr4_3:48457291-48457310 None:intergenic 15.0%
!!! TGAAAATCATGTTTTTTTAT+GGG - chr4_3:48457346-48457365 None:intergenic 15.0%
!!! TTGAAAATCATGTTTTTTTA+TGG - chr4_3:48457347-48457366 None:intergenic 15.0%
!! ATTACAAAAAAATAATTCTG+TGG - chr4_3:48459406-48459425 None:intergenic 15.0%
!! TGAAATAATTCATTATATCT+TGG + chr4_3:48459922-48459941 Msa0644540:intron 15.0%
!! AATTAACGAATCAAATTGAA+GGG - chr4_3:48455413-48455432 None:intergenic 20.0%
!!! TGTCTTAATTTTGATGAAAT+TGG + chr4_3:48455731-48455750 Msa0644540:intron 20.0%
!!! GTCTTAATTTTGATGAAATT+GGG + chr4_3:48455732-48455751 Msa0644540:intron 20.0%
!! ATAACTTCAAATATATTGCA+AGG + chr4_3:48456392-48456411 Msa0644540:intron 20.0%
!! AAGAAAATTAAAATAACAGC+CGG - chr4_3:48456419-48456438 None:intergenic 20.0%
!!! ATTTTAATTTTCTTATGTGG+GGG + chr4_3:48456425-48456444 Msa0644540:intron 20.0%
!! TTTGTTGATATCTTAACATA+GGG - chr4_3:48457206-48457225 None:intergenic 20.0%
!!! TTTTGTTGATATCTTAACAT+AGG - chr4_3:48457207-48457226 None:intergenic 20.0%
!! TTATTATCATATTGCTAATG+TGG + chr4_3:48457688-48457707 Msa0644540:intron 20.0%
!! ATTTCAGAAGAATATATAAC+AGG - chr4_3:48457997-48458016 None:intergenic 20.0%
!!! TGTTATATATTCTTCTGAAA+TGG + chr4_3:48457996-48458015 Msa0644540:CDS 20.0%
!! TTATTTGAATTCATTTGTTC+AGG + chr4_3:48458365-48458384 Msa0644540:intron 20.0%
!! TCATCAATAAATACTATACT+GGG - chr4_3:48458678-48458697 None:intergenic 20.0%
!! AAGTACTTTAAATCAATTGT+TGG + chr4_3:48458761-48458780 Msa0644540:CDS 20.0%
!!! TCAAATAAATCTGAAATATC+TGG - chr4_3:48458932-48458951 None:intergenic 20.0%
!! ACAATTATCTGAAGATTATT+TGG + chr4_3:48459533-48459552 Msa0644540:intron 20.0%
!! TATTATCAGTAGTTGAAAAA+AGG - chr4_3:48459571-48459590 None:intergenic 20.0%
!! ATGTGAAACAAAATAAGTAA+TGG - chr4_3:48459949-48459968 None:intergenic 20.0%
!!! TTAAATCTATCGTAATTTGT+GGG - chr4_3:48460464-48460483 None:intergenic 20.0%
!! AAACATAAACTTAACTATGT+GGG - chr4_3:48460581-48460600 None:intergenic 20.0%
! AAAAACGAGATACGATAAAA+TGG - chr4_3:48455220-48455239 None:intergenic 25.0%
!!! AGCATGATTTTTTCAAGAAT+TGG + chr4_3:48455343-48455362 Msa0644540:exon 25.0%
!!! GCATGATTTTTTCAAGAATT+GGG + chr4_3:48455344-48455363 Msa0644540:exon 25.0%
! GAATTAACGAATCAAATTGA+AGG - chr4_3:48455414-48455433 None:intergenic 25.0%
!! TTTTATCGATGATGTTGAAA+AGG + chr4_3:48455539-48455558 Msa0644540:CDS 25.0%
! TTTATCGATGATGTTGAAAA+GGG + chr4_3:48455540-48455559 Msa0644540:CDS 25.0%
!! TAACTTACTCTTTTTCTTTG+GGG - chr4_3:48455691-48455710 None:intergenic 25.0%
!! CTAACTTACTCTTTTTCTTT+GGG - chr4_3:48455692-48455711 None:intergenic 25.0%
! CAAAGAAAAAGAGTAAGTTA+GGG + chr4_3:48455691-48455710 Msa0644540:intron 25.0%
!! TTTTGATGAAATTGGGAAAA+TGG + chr4_3:48455739-48455758 Msa0644540:intron 25.0%
! TTTGATGAAATTGGGAAAAT+GGG + chr4_3:48455740-48455759 Msa0644540:intron 25.0%
!!! TTATGAAAAGTTTTATCCCA+AGG + chr4_3:48455810-48455829 Msa0644540:CDS 25.0%
! AATTACTCTCAATTAGTGTT+GGG + chr4_3:48456003-48456022 Msa0644540:intron 25.0%
!! TTCTCTCAATCATATGATTT+TGG + chr4_3:48456096-48456115 Msa0644540:intron 25.0%
!!! TTTTGAGGTATTTATATGTG+TGG + chr4_3:48456134-48456153 Msa0644540:intron 25.0%
!! TTTGAGGTATTTATATGTGT+GGG + chr4_3:48456135-48456154 Msa0644540:intron 25.0%
!!! TTTTAATTTTCTTATGTGGG+GGG + chr4_3:48456426-48456445 Msa0644540:intron 25.0%
! GACTTGTAAACTTATGTTTA+AGG - chr4_3:48456544-48456563 None:intergenic 25.0%
! TAAACATAAGTTTACAAGTC+AGG + chr4_3:48456544-48456563 Msa0644540:intron 25.0%
! AAACATAAGTTTACAAGTCA+GGG + chr4_3:48456545-48456564 Msa0644540:intron 25.0%
! CTGATACTATCTTAGAATTT+GGG - chr4_3:48456618-48456637 None:intergenic 25.0%
! TCTGATACTATCTTAGAATT+TGG - chr4_3:48456619-48456638 None:intergenic 25.0%
!! ATCGATGTTCAATTTTCAAT+CGG - chr4_3:48456890-48456909 None:intergenic 25.0%
! CTAATAGTATTCTTGTGTAA+TGG - chr4_3:48456958-48456977 None:intergenic 25.0%
!!! AAAAACATGATTTTCAAGTC+TGG + chr4_3:48457350-48457369 Msa0644540:intron 25.0%
! AAAACAGTTCAAGATAATGT+TGG - chr4_3:48457410-48457429 None:intergenic 25.0%
! AATATGCAGATACATATCTT+AGG - chr4_3:48457490-48457509 None:intergenic 25.0%
! AAGATATGTATCTGCATATT+TGG + chr4_3:48457490-48457509 Msa0644540:intron 25.0%
! AGATATGTATCTGCATATTT+GGG + chr4_3:48457491-48457510 Msa0644540:intron 25.0%
!!! ATAACAATTTTGATACGTCT+AGG + chr4_3:48457542-48457561 Msa0644540:intron 25.0%
!!! AAAGCTTATTTTTAAACTCC+TGG - chr4_3:48457744-48457763 None:intergenic 25.0%
!! GGAGTTTAAAAATAAGCTTT+TGG + chr4_3:48457744-48457763 Msa0644540:CDS 25.0%
!!! TATATTCTTCTGAAATGGTT+TGG + chr4_3:48458001-48458020 Msa0644540:CDS 25.0%
! AGACAAAAATACCAAAAACA+AGG + chr4_3:48458182-48458201 Msa0644540:CDS 25.0%
! AAAAATACCAAAAACAAGGT+TGG + chr4_3:48458186-48458205 Msa0644540:intron 25.0%
! GTGATTTATTCTTCATGAAT+TGG + chr4_3:48458208-48458227 Msa0644540:intron 25.0%
!!! GTTTATTTTAAAGATGTTGC+TGG + chr4_3:48458387-48458406 Msa0644540:CDS 25.0%
! CTCATCAATAAATACTATAC+TGG - chr4_3:48458679-48458698 None:intergenic 25.0%
! TACTTTAAATCAATTGTTGG+TGG + chr4_3:48458764-48458783 Msa0644540:CDS 25.0%
!! AAAAACAAACAGGCTTTTAA+AGG - chr4_3:48459163-48459182 None:intergenic 25.0%
!! TATAAAATGTTTTCTGGGTT+TGG + chr4_3:48459210-48459229 Msa0644540:intron 25.0%
!! TAATTTAAGACATCATGATG+AGG + chr4_3:48459497-48459516 Msa0644540:intron 25.0%
! TATCTGAAGATTATTTGGAT+TGG + chr4_3:48459538-48459557 Msa0644540:intron 25.0%
!! ACAATAGTTACTTTCAACAA+TGG - chr4_3:48459709-48459728 None:intergenic 25.0%
! AGCAATGAATAAAAGAAAAG+AGG - chr4_3:48459885-48459904 None:intergenic 25.0%
!!! TGTATATCAGTGTTTTTTTG+TGG - chr4_3:48460018-48460037 None:intergenic 25.0%
! ATCTCATGACTTACAATATT+GGG - chr4_3:48460064-48460083 None:intergenic 25.0%
! CTTAAATCTATCGTAATTTG+TGG - chr4_3:48460465-48460484 None:intergenic 25.0%
! AATTACGATAGATTTAAGCT+AGG + chr4_3:48460467-48460486 Msa0644540:CDS 25.0%
! ATTACGATAGATTTAAGCTA+GGG + chr4_3:48460468-48460487 Msa0644540:CDS 25.0%
! CAAACATAAACTTAACTATG+TGG - chr4_3:48460582-48460601 None:intergenic 25.0%
ATGGTGATATTTGTAGTTGT+CGG - chr4_3:48455201-48455220 None:intergenic 30.0%
TTGAAGAAACAATGGTAACT+AGG - chr4_3:48455323-48455342 None:intergenic 30.0%
!! ATCATGCTTTGAAGAAACAA+TGG - chr4_3:48455331-48455350 None:intergenic 30.0%
ATGATGTTGAAAAGGGATTA+GGG + chr4_3:48455547-48455566 Msa0644540:CDS 30.0%
! AAAAGGGATTAGGGTTTTTA+AGG + chr4_3:48455556-48455575 Msa0644540:CDS 30.0%
! AAAGGGATTAGGGTTTTTAA+GGG + chr4_3:48455557-48455576 Msa0644540:CDS 30.0%
! CCTAACTTACTCTTTTTCTT+TGG - chr4_3:48455693-48455712 None:intergenic 30.0%
CCAAAGAAAAAGAGTAAGTT+AGG + chr4_3:48455690-48455709 Msa0644540:intron 30.0%
GAGAAAAAATCTGAGTCTAA+AGG + chr4_3:48455859-48455878 Msa0644540:CDS 30.0%
! TCTTGTGTTATTGTTAGTTG+TGG + chr4_3:48455917-48455936 Msa0644540:intron 30.0%
GAATTACTCTCAATTAGTGT+TGG + chr4_3:48456002-48456021 Msa0644540:intron 30.0%
TTGAGAGAAAACATGTTGTT+GGG - chr4_3:48456085-48456104 None:intergenic 30.0%
ATTGAGAGAAAACATGTTGT+TGG - chr4_3:48456086-48456105 None:intergenic 30.0%
!!! TCTGTACTGGTTTAATTTTG+AGG + chr4_3:48456119-48456138 Msa0644540:intron 30.0%
! TTGAGGTATTTATATGTGTG+GGG + chr4_3:48456136-48456155 Msa0644540:intron 30.0%
TAAGTGTTAAAAATTGCTGC+TGG - chr4_3:48456211-48456230 None:intergenic 30.0%
TTCAAATATATTGCAAGGTC+CGG + chr4_3:48456397-48456416 Msa0644540:intron 30.0%
GATCTATAAATATCCGTGTT+CGG + chr4_3:48456478-48456497 Msa0644540:intron 30.0%
! ACTATCTTAGAATTTGGGTT+GGG - chr4_3:48456613-48456632 None:intergenic 30.0%
TACTATCTTAGAATTTGGGT+TGG - chr4_3:48456614-48456633 None:intergenic 30.0%
AACTTCATCTCATTCAATGT+GGG - chr4_3:48456754-48456773 None:intergenic 30.0%
AAACTTCATCTCATTCAATG+TGG - chr4_3:48456755-48456774 None:intergenic 30.0%
TTAACTCATCCTTACAAAAC+TGG - chr4_3:48456819-48456838 None:intergenic 30.0%
!! AACATCTAGCCTTAGAATAT+GGG - chr4_3:48456848-48456867 None:intergenic 30.0%
!! TAACATCTAGCCTTAGAATA+TGG - chr4_3:48456849-48456868 None:intergenic 30.0%
! ATTGCATATTCGAGCTTTAT+AGG - chr4_3:48457037-48457056 None:intergenic 30.0%
TAAAGCTCGAATATGCAATA+CGG + chr4_3:48457038-48457057 Msa0644540:intron 30.0%
TCAAAATGGTTGTGAATTGT+TGG - chr4_3:48457277-48457296 None:intergenic 30.0%
!!! TCATGTTTTTTTATGGGTGA+TGG - chr4_3:48457340-48457359 None:intergenic 30.0%
TAATGTTGGACTTCTTGAAT+TGG - chr4_3:48457396-48457415 None:intergenic 30.0%
TTAAAATGTGAGACAGTTGT+AGG - chr4_3:48457453-48457472 None:intergenic 30.0%
CATATCTTAGGAAAGATGAA+GGG - chr4_3:48457478-48457497 None:intergenic 30.0%
ACATATCTTAGGAAAGATGA+AGG - chr4_3:48457479-48457498 None:intergenic 30.0%
!!! AAAAATAAGCTTTTGGAACC+AGG + chr4_3:48457751-48457770 Msa0644540:CDS 30.0%
! ATTTGTTGGAGACAACAATA+TGG - chr4_3:48457786-48457805 None:intergenic 30.0%
!!! TATTTTGGCAACTGATTTGT+TGG - chr4_3:48457800-48457819 None:intergenic 30.0%
! AGAGTTCCTCACATATATTT+TGG - chr4_3:48457815-48457834 None:intergenic 30.0%
!!! TAAATCACCAACCTTGTTTT+TGG - chr4_3:48458196-48458215 None:intergenic 30.0%
GATTTCATGGAAATGTTTGT+CGG + chr4_3:48458600-48458619 Msa0644540:CDS 30.0%
ATTGATGAGATTGATGCAAT+TGG + chr4_3:48458690-48458709 Msa0644540:CDS 30.0%
! AAATCAATTGTTGGTGGAAA+TGG + chr4_3:48458770-48458789 Msa0644540:CDS 30.0%
ATTGATGTACCTGACATTAA+AGG + chr4_3:48458900-48458919 Msa0644540:CDS 30.0%
AGCCTTCATATTATTCTCAA+AGG + chr4_3:48458973-48458992 Msa0644540:CDS 30.0%
! AGCCTTTGAGAATAATATGA+AGG - chr4_3:48458978-48458997 None:intergenic 30.0%
! GTTAAGCTGTTTAAAACAGT+CGG + chr4_3:48459236-48459255 Msa0644540:intron 30.0%
AATACTCATGTTTCTTGTCT+AGG + chr4_3:48459600-48459619 Msa0644540:intron 30.0%
AAGAGGTGAGTAAACAAAAT+TGG - chr4_3:48459868-48459887 None:intergenic 30.0%
CATCTCATGACTTACAATAT+TGG - chr4_3:48460065-48460084 None:intergenic 30.0%
TATGGTTTCAGTGAAAAAGT+GGG + chr4_3:48460198-48460217 Msa0644540:CDS 30.0%
!! GTTTAGTCATTTTGCTGATA+TGG + chr4_3:48460631-48460650 Msa0644540:three_prime_UTR 30.0%
! GAAATAGACTTTGATTAGCT+TGG - chr4_3:48460726-48460745 None:intergenic 30.0%
TGGTGATATTTGTAGTTGTC+GGG - chr4_3:48455200-48455219 None:intergenic 35.0%
!! GTCATGTAGAATTTGTTGCA+CGG + chr4_3:48455471-48455490 Msa0644540:intron 35.0%
GATGATGTTGAAAAGGGATT+AGG + chr4_3:48455546-48455565 Msa0644540:CDS 35.0%
!! AAGGGATTAGGGTTTTTAAG+GGG + chr4_3:48455558-48455577 Msa0644540:CDS 35.0%
AAACCCATTATTACGAGCTA+TGG - chr4_3:48455598-48455617 None:intergenic 35.0%
! GTTTTATCCCAAGGAAAAGA+AGG + chr4_3:48455819-48455838 Msa0644540:CDS 35.0%
!! CATATGATTTTGGTCTGTAC+TGG + chr4_3:48456106-48456125 Msa0644540:intron 35.0%
! TGAGGTATTTATATGTGTGG+GGG + chr4_3:48456137-48456156 Msa0644540:intron 35.0%
CAGTTTGTCTTGCGATAAAT+GGG + chr4_3:48456182-48456201 Msa0644540:intron 35.0%
AGTTTGTCTTGCGATAAATG+GGG + chr4_3:48456183-48456202 Msa0644540:intron 35.0%
TTTCTTTCATCCCTTTCTCT+TGG + chr4_3:48456344-48456363 Msa0644540:CDS 35.0%
TTAACACACTCACACCTTTA+CGG - chr4_3:48456726-48456745 None:intergenic 35.0%
! TAAAGGTGTGAGTGTGTTAA+GGG + chr4_3:48456726-48456745 Msa0644540:intron 35.0%
ACTTCATCTCATTCAATGTG+GGG - chr4_3:48456753-48456772 None:intergenic 35.0%
TGAACACAAGTTTACAAGTG+AGG + chr4_3:48456774-48456793 Msa0644540:intron 35.0%
GAACACAAGTTTACAAGTGA+GGG + chr4_3:48456775-48456794 Msa0644540:intron 35.0%
TAAACCCAACCCATATTCTA+AGG + chr4_3:48456836-48456855 Msa0644540:intron 35.0%
!! TTTCCATGTTTTTGCTTGCT+TGG + chr4_3:48456998-48457017 Msa0644540:intron 35.0%
ATACCAAGCAAGCAAAAACA+TGG - chr4_3:48457004-48457023 None:intergenic 35.0%
ACAATATGGTCTACTAATCC+TGG - chr4_3:48457772-48457791 None:intergenic 35.0%
CAGTTGCCAAAATATATGTG+AGG + chr4_3:48457806-48457825 Msa0644540:CDS 35.0%
GGTCGTGGAATATTTAACAT+TGG + chr4_3:48458138-48458157 Msa0644540:CDS 35.0%
CCTAAAGAAAAAGTGGACAT+GGG - chr4_3:48458291-48458310 None:intergenic 35.0%
!!! CCATGTCCACTTTTTCTTTA+GGG + chr4_3:48458289-48458308 Msa0644540:intron 35.0%
ACAACTCCCTAAAGAAAAAG+TGG - chr4_3:48458298-48458317 None:intergenic 35.0%
!! ACTTTTTCTTTAGGGAGTTG+TGG + chr4_3:48458297-48458316 Msa0644540:intron 35.0%
CGTATTTCTTAGGATTCTTG+AGG - chr4_3:48458455-48458474 None:intergenic 35.0%
!!! AAGAGCACCTTTTGGAATTT+TGG - chr4_3:48458490-48458509 None:intergenic 35.0%
!!! TGCAGTTGCTTTTGCTAAAA+GGG - chr4_3:48458541-48458560 None:intergenic 35.0%
! TTTTAGCAAAAGCAACTGCA+GGG + chr4_3:48458541-48458560 Msa0644540:CDS 35.0%
GAACCAGATATGGAAAGAAA+TGG - chr4_3:48458579-48458598 None:intergenic 35.0%
CATGAAATCAGAACCAGATA+TGG - chr4_3:48458589-48458608 None:intergenic 35.0%
!! CATATCTGGTTCTGATTTCA+TGG + chr4_3:48458587-48458606 Msa0644540:CDS 35.0%
ATGAGATTGATGCAATTGGT+CGG + chr4_3:48458694-48458713 Msa0644540:CDS 35.0%
TATTAGACAACGCCTTACTT+AGG + chr4_3:48458850-48458869 Msa0644540:CDS 35.0%
GTACATCAATTGATATCGTG+CGG - chr4_3:48458890-48458909 None:intergenic 35.0%
TGATGAATCACAAGTCACAA+TGG + chr4_3:48459076-48459095 Msa0644540:CDS 35.0%
TGTCTAGGTAATAAGTAAGC+TGG + chr4_3:48459615-48459634 Msa0644540:intron 35.0%
AGGTAATAAGTAAGCTGGAA+AGG + chr4_3:48459620-48459639 Msa0644540:intron 35.0%
AAAGTAACTATTGTTCCTCG+CGG + chr4_3:48459715-48459734 Msa0644540:CDS 35.0%
GTTCTCACTAGGAACATATT+GGG - chr4_3:48459761-48459780 None:intergenic 35.0%
AAATGATGAAACAACCTGCT+CGG - chr4_3:48459845-48459864 None:intergenic 35.0%
!! TACAATATTGGGAAGCATCA+AGG - chr4_3:48460053-48460072 None:intergenic 35.0%
AAGTCATGAGATGAGTATGA+TGG + chr4_3:48460072-48460091 Msa0644540:intron 35.0%
! ATGGTTTCTGTCCCTTTTTA+CGG + chr4_3:48460091-48460110 Msa0644540:intron 35.0%
TATTTGGGCATATGTCATCT+TGG - chr4_3:48460172-48460191 None:intergenic 35.0%
CTATGGTTTCAGTGAAAAAG+TGG + chr4_3:48460197-48460216 Msa0644540:CDS 35.0%
TACTGGTAACATCATTGATC+AGG + chr4_3:48460275-48460294 Msa0644540:CDS 35.0%
GTGTTCTTCTATAAGCTGTA+TGG - chr4_3:48460337-48460356 None:intergenic 35.0%
ACAGCTTATAGAAGAACACA+AGG + chr4_3:48460338-48460357 Msa0644540:CDS 35.0%
TCTGCCATAGCTCGTAATAA+TGG + chr4_3:48455591-48455610 Msa0644540:CDS 40.0%
CTGCCATAGCTCGTAATAAT+GGG + chr4_3:48455592-48455611 Msa0644540:CDS 40.0%
AATCAATTGCTGCAAACCCT+AGG + chr4_3:48455640-48455659 Msa0644540:CDS 40.0%
AAAACATGCGATGAAGCCTA+GGG - chr4_3:48455659-48455678 None:intergenic 40.0%
!! GAAAAGAAGGAAGTGCCAAA+GGG + chr4_3:48455832-48455851 Msa0644540:CDS 40.0%
!!! GATTTTTTCTCCTCTCCCTT+TGG - chr4_3:48455850-48455869 None:intergenic 40.0%
CCATTTATCGCAAGACAAAC+TGG - chr4_3:48456184-48456203 None:intergenic 40.0%
CCAGTTTGTCTTGCGATAAA+TGG + chr4_3:48456181-48456200 Msa0644540:intron 40.0%
TGAGTCAAAGTCAAACACAG+AGG + chr4_3:48456247-48456266 Msa0644540:CDS 40.0%
TCAAAGTCAAACACAGAGGA+TGG + chr4_3:48456251-48456270 Msa0644540:CDS 40.0%
AAACTATCTCACCCCATTGT+TGG + chr4_3:48456310-48456329 Msa0644540:CDS 40.0%
! TAATTTTCTTATGTGGGGGG+AGG + chr4_3:48456429-48456448 Msa0644540:intron 40.0%
! AATTTTCTTATGTGGGGGGA+GGG + chr4_3:48456430-48456449 Msa0644540:intron 40.0%
AACTCAAACAATGCCGAACA+CGG - chr4_3:48456494-48456513 None:intergenic 40.0%
TTGAGTTAAGAGTCCTACAC+TGG + chr4_3:48456507-48456526 Msa0644540:intron 40.0%
! GTCCTACACTGGATTAGATA+AGG + chr4_3:48456518-48456537 Msa0644540:intron 40.0%
! GTAAAGGTGTGAGTGTGTTA+AGG + chr4_3:48456725-48456744 Msa0644540:intron 40.0%
! AAAGGTGTGAGTGTGTTAAG+GGG + chr4_3:48456727-48456746 Msa0644540:intron 40.0%
CCTTACAAAACTGGTCAGTA+AGG - chr4_3:48456810-48456829 None:intergenic 40.0%
!! CCTTACTGACCAGTTTTGTA+AGG + chr4_3:48456807-48456826 Msa0644540:intron 40.0%
!! CTAGCCTTAGAATATGGGTT+GGG - chr4_3:48456843-48456862 None:intergenic 40.0%
!! TCTAGCCTTAGAATATGGGT+TGG - chr4_3:48456844-48456863 None:intergenic 40.0%
AATGGTTGTGAATTGTTGGC+TGG - chr4_3:48457273-48457292 None:intergenic 40.0%
! TTATGGGTGATGGTAATGTG+AGG - chr4_3:48457330-48457349 None:intergenic 40.0%
CAATACTTCGAGGTTACACA+TGG - chr4_3:48457576-48457595 None:intergenic 40.0%
CATGTGTAACCTCGAAGTAT+TGG + chr4_3:48457574-48457593 Msa0644540:intron 40.0%
TATCGGATACCAATACTTCG+AGG - chr4_3:48457586-48457605 None:intergenic 40.0%
CAATTCAAAGGCTCGCATAT+CGG - chr4_3:48457603-48457622 None:intergenic 40.0%
AGACGTGTGGTTCAATTCAA+AGG - chr4_3:48457615-48457634 None:intergenic 40.0%
GATGACTCTACATCTTTGTC+TGG + chr4_3:48457646-48457665 Msa0644540:intron 40.0%
!! TTCTCTGCAGATTAGTTTCC+AGG + chr4_3:48457723-48457742 Msa0644540:intron 40.0%
TTCGCTGTCTGCTTGATTAA+GGG - chr4_3:48457839-48457858 None:intergenic 40.0%
!!! TGGAAGTGTTGAGTCTTTTG+AGG + chr4_3:48457918-48457937 Msa0644540:CDS 40.0%
!! GTCTTTTGAGGAGAAGTTAG+AGG + chr4_3:48457930-48457949 Msa0644540:CDS 40.0%
!! TTCTGAAATGGTTTGGTACC+AGG + chr4_3:48458008-48458027 Msa0644540:CDS 40.0%
GAGAGTTCCCAAAATCAACA+GGG - chr4_3:48458055-48458074 None:intergenic 40.0%
AGAGAGTTCCCAAAATCAAC+AGG - chr4_3:48458056-48458075 None:intergenic 40.0%
!!! TGTTGATTTTGGGAACTCTC+TGG + chr4_3:48458055-48458074 Msa0644540:CDS 40.0%
! TTTGGGAACTCTCTGGTTTA+TGG + chr4_3:48458062-48458081 Msa0644540:CDS 40.0%
! TTGGGAACTCTCTGGTTTAT+GGG + chr4_3:48458063-48458082 Msa0644540:CDS 40.0%
! TTTATGGGAAGGAAAGTGCA+AGG + chr4_3:48458078-48458097 Msa0644540:CDS 40.0%
GGAAAGGCAATGATCAACTA+GGG - chr4_3:48458270-48458289 None:intergenic 40.0%
AGAAAAAGTGGACATGGGAA+AGG - chr4_3:48458286-48458305 None:intergenic 40.0%
!!! CCCATGTCCACTTTTTCTTT+AGG + chr4_3:48458288-48458307 Msa0644540:intron 40.0%
CCCTAAAGAAAAAGTGGACA+TGG - chr4_3:48458292-48458311 None:intergenic 40.0%
CGAGGCAAAGCAAGAAATTA+TGG + chr4_3:48458416-48458435 Msa0644540:CDS 40.0%
CCAAGCTCTTCGTATTTCTT+AGG - chr4_3:48458465-48458484 None:intergenic 40.0%
CCTAAGAAATACGAAGAGCT+TGG + chr4_3:48458462-48458481 Msa0644540:CDS 40.0%
!! CTTGGTGCCAAAATTCCAAA+AGG + chr4_3:48458480-48458499 Msa0644540:CDS 40.0%
!! AATTCCAAAAGGTGCTCTTC+TGG + chr4_3:48458491-48458510 Msa0644540:CDS 40.0%
!!! CTGCAGTTGCTTTTGCTAAA+AGG - chr4_3:48458542-48458561 None:intergenic 40.0%
! CTTTTAGCAAAAGCAACTGC+AGG + chr4_3:48458540-48458559 Msa0644540:CDS 40.0%
TTTAGCAAAAGCAACTGCAG+GGG + chr4_3:48458542-48458561 Msa0644540:CDS 40.0%
!! GTGCCATTTCTTTCCATATC+TGG + chr4_3:48458573-48458592 Msa0644540:CDS 40.0%
ATGGAAATGTTTGTCGGTGT+TGG + chr4_3:48458606-48458625 Msa0644540:CDS 40.0%
! GAAACTTGTTTCACGAAGCA+AGG + chr4_3:48458643-48458662 Msa0644540:CDS 40.0%
TTGATGCAATTGGTCGGAAA+AGG + chr4_3:48458700-48458719 Msa0644540:CDS 40.0%
TGATGCAATTGGTCGGAAAA+GGG + chr4_3:48458701-48458720 Msa0644540:CDS 40.0%
! CAATTGTTGGTGGAAATGGA+TGG + chr4_3:48458774-48458793 Msa0644540:CDS 40.0%
! TTGGTGGAAATGGATGGTTT+TGG + chr4_3:48458780-48458799 Msa0644540:CDS 40.0%
GAGAATAATATGAAGGCTCG+TGG - chr4_3:48458971-48458990 None:intergenic 40.0%
AGTCACAATGGATCATTTCG+AGG + chr4_3:48459088-48459107 Msa0644540:CDS 40.0%
! TGGTTTGGAGAAGAAGAACA+GGG + chr4_3:48459133-48459152 Msa0644540:CDS 40.0%
GGTTCTCACTAGGAACATAT+TGG - chr4_3:48459762-48459781 None:intergenic 40.0%
! GATATGACTTGTATGACCCT+TGG + chr4_3:48459808-48459827 Msa0644540:CDS 40.0%
ATGAGAACCTGCCGTAAAAA+GGG - chr4_3:48460105-48460124 None:intergenic 40.0%
AATGAGAACCTGCCGTAAAA+AGG - chr4_3:48460106-48460125 None:intergenic 40.0%
! TTTTTACGGCAGGTTCTCAT+TGG + chr4_3:48460105-48460124 Msa0644540:intron 40.0%
AGTACTTCACCAAGATGACT+TGG + chr4_3:48460401-48460420 Msa0644540:CDS 40.0%
AGATTCGAACCAAGTCATCT+TGG - chr4_3:48460413-48460432 None:intergenic 40.0%
!! AGATGACTTGGTTCGAATCT+TGG + chr4_3:48460413-48460432 Msa0644540:CDS 40.0%
TAAGCTAGGGTTTCAAGATG+AGG + chr4_3:48460481-48460500 Msa0644540:exon 40.0%
GCTGATATGGACAACTTGTA+CGG + chr4_3:48460644-48460663 Msa0644540:three_prime_UTR 40.0%
TTGCACGGTGAAGCAAGATT+GGG + chr4_3:48455486-48455505 Msa0644540:CDS 45.0%
GCAAGATTGGGAACGCTTTA+TGG + chr4_3:48455498-48455517 Msa0644540:CDS 45.0%
GAAAACATGCGATGAAGCCT+AGG - chr4_3:48455660-48455679 None:intergenic 45.0%
! GGCACTTCCTTCTTTTCCTT+GGG - chr4_3:48455829-48455848 None:intergenic 45.0%
! TGGCACTTCCTTCTTTTCCT+TGG - chr4_3:48455830-48455849 None:intergenic 45.0%
!! GGAAAAGAAGGAAGTGCCAA+AGG + chr4_3:48455831-48455850 Msa0644540:CDS 45.0%
AAGTCAAACACAGAGGATGG+AGG + chr4_3:48456254-48456273 Msa0644540:CDS 45.0%
ATAGTCCCACCACCAACAAT+GGG - chr4_3:48456325-48456344 None:intergenic 45.0%
AATAGTCCCACCACCAACAA+TGG - chr4_3:48456326-48456345 None:intergenic 45.0%
ATCACGAGGACCAAGAGAAA+GGG - chr4_3:48456357-48456376 None:intergenic 45.0%
! ATTTTCTTATGTGGGGGGAG+GGG + chr4_3:48456431-48456450 Msa0644540:intron 45.0%
! GGCCTTATCTAATCCAGTGT+AGG - chr4_3:48456523-48456542 None:intergenic 45.0%
CCTTACAAAACTGTCCAGTG+AGG - chr4_3:48456580-48456599 None:intergenic 45.0%
!! CCTCACTGGACAGTTTTGTA+AGG + chr4_3:48456577-48456596 Msa0644540:intron 45.0%
AGACAGTTGTAGGACATCAG+TGG - chr4_3:48457443-48457462 None:intergenic 45.0%
TCTCATTGCTAAGAGACGTG+TGG - chr4_3:48457628-48457647 None:intergenic 45.0%
TCGCTGTCTGCTTGATTAAG+GGG - chr4_3:48457838-48457857 None:intergenic 45.0%
CTTCGCTGTCTGCTTGATTA+AGG - chr4_3:48457840-48457859 None:intergenic 45.0%
GCGCAAATCTCATTAACTCC+TGG - chr4_3:48458029-48458048 None:intergenic 45.0%
GTTCCCAAAATCAACAGGGT+TGG - chr4_3:48458051-48458070 None:intergenic 45.0%
! GAACTCTCTGGTTTATGGGA+AGG + chr4_3:48458067-48458086 Msa0644540:CDS 45.0%
! AGGAAAGTGCAAGGTGGATT+TGG + chr4_3:48458087-48458106 Msa0644540:CDS 45.0%
GGGAAAGGCAATGATCAACT+AGG - chr4_3:48458271-48458290 None:intergenic 45.0%
! AAAGGGTTTTTCCTGTGCCT+GGG - chr4_3:48458524-48458543 None:intergenic 45.0%
! AAAAGGGTTTTTCCTGTGCC+TGG - chr4_3:48458525-48458544 None:intergenic 45.0%
AACAAGTTTCTCACCCTGGA+TGG - chr4_3:48458633-48458652 None:intergenic 45.0%
GTGAAACAAGTTTCTCACCC+TGG - chr4_3:48458637-48458656 None:intergenic 45.0%
GATGCAATTGGTCGGAAAAG+GGG + chr4_3:48458702-48458721 Msa0644540:CDS 45.0%
TGGTCACGACCTTTAATGTC+AGG - chr4_3:48458912-48458931 None:intergenic 45.0%
TCCAGCAAATCCTGGAGTAA+GGG - chr4_3:48459006-48459025 None:intergenic 45.0%
ATTTCGAGGCAGCTATCGAT+AGG + chr4_3:48459102-48459121 Msa0644540:CDS 45.0%
GCAGCTATCGATAGGATCAT+TGG + chr4_3:48459110-48459129 Msa0644540:CDS 45.0%
GCTATCGATAGGATCATTGG+TGG + chr4_3:48459113-48459132 Msa0644540:CDS 45.0%
! CGATAGGATCATTGGTGGTT+TGG + chr4_3:48459118-48459137 Msa0644540:CDS 45.0%
! GTGGTTTGGAGAAGAAGAAC+AGG + chr4_3:48459132-48459151 Msa0644540:CDS 45.0%
TTGGAGAAGAAGAACAGGGT+AGG + chr4_3:48459137-48459156 Msa0644540:intron 45.0%
TTCCTAGTGAGAACCTTCTC+AGG + chr4_3:48459767-48459786 Msa0644540:CDS 45.0%
TGAGAACCTTCTCAGGACAA+AGG + chr4_3:48459774-48459793 Msa0644540:CDS 45.0%
! ATGACTTGTATGACCCTTGG+TGG + chr4_3:48459811-48459830 Msa0644540:CDS 45.0%
! TTTCTGTCCCTTTTTACGGC+AGG + chr4_3:48460095-48460114 Msa0644540:intron 45.0%
!! CAAGTCATTTTGTGCTCCAG+TGG - chr4_3:48460139-48460158 None:intergenic 45.0%
CACTGGAGCACAAAATGACT+TGG + chr4_3:48460137-48460156 Msa0644540:CDS 45.0%
!! CATTTTGAGGGAAAGAGAGG+AGG - chr4_3:48460224-48460243 None:intergenic 45.0%
!! CGTCATTTTGAGGGAAAGAG+AGG - chr4_3:48460227-48460246 None:intergenic 45.0%
!! CAAACGCGTCGTCATTTTGA+GGG - chr4_3:48460236-48460255 None:intergenic 45.0%
CTCAAAATGACGACGCGTTT+GGG + chr4_3:48460235-48460254 Msa0644540:CDS 45.0%
AAACCATACAGTGGCGATAC+TGG + chr4_3:48460258-48460277 Msa0644540:CDS 45.0%
TTACCAGTATCGCCACTGTA+TGG - chr4_3:48460264-48460283 None:intergenic 45.0%
! TTGATCAGGAAGTGCGAGAT+TGG + chr4_3:48460289-48460308 Msa0644540:CDS 45.0%
! TGATCAGGAAGTGCGAGATT+GGG + chr4_3:48460290-48460309 Msa0644540:CDS 45.0%
AACTATGTGGGAACAACCTC+AGG - chr4_3:48460569-48460588 None:intergenic 45.0%
!!! TTTATTAATGATTTTTAATT+GGG + chr4_3:48455449-48455468 Msa0644540:intron 5.0%
!!! AAACATTTTATATTTTAAAA+AGG - chr4_3:48459202-48459221 None:intergenic 5.0%
GTTGCACGGTGAAGCAAGAT+TGG + chr4_3:48455485-48455504 Msa0644540:CDS 50.0%
CTATCTCACCCCATTGTTGG+TGG + chr4_3:48456313-48456332 Msa0644540:CDS 50.0%
TAGTCCCACCACCAACAATG+GGG - chr4_3:48456324-48456343 None:intergenic 50.0%
GATCACGAGGACCAAGAGAA+AGG - chr4_3:48456358-48456377 None:intergenic 50.0%
! CAGGGCAATTTTCACCTCAC+TGG + chr4_3:48456563-48456582 Msa0644540:intron 50.0%
CAGAGTCTATCCAAGATCCG+CGG + chr4_3:48456635-48456654 Msa0644540:intron 50.0%
AGAGTCTATCCAAGATCCGC+GGG + chr4_3:48456636-48456655 Msa0644540:intron 50.0%
! TGCACTCAGGTCACCGTTTT+GGG + chr4_3:48456663-48456682 Msa0644540:intron 50.0%
CGCTCCAGATGTTTAGTCGT+AGG + chr4_3:48456698-48456717 Msa0644540:intron 50.0%
! TTTAGTCGTAGGCGCCGTAA+AGG + chr4_3:48456709-48456728 Msa0644540:intron 50.0%
! TTGGCTGGCTATTGCAGAGA+CGG - chr4_3:48457258-48457277 None:intergenic 50.0%
CAAGGAACCCTTCCTGCAAA+GGG + chr4_3:48457862-48457881 Msa0644540:CDS 50.0%
ACCAGATCCCTTTGCAGGAA+GGG - chr4_3:48457872-48457891 None:intergenic 50.0%
!!! TGCGCCAACCCTGTTGATTT+TGG + chr4_3:48458044-48458063 Msa0644540:CDS 50.0%
!!! GCGCCAACCCTGTTGATTTT+GGG + chr4_3:48458045-48458064 Msa0644540:CDS 50.0%
! ATGGGAAGGAAAGTGCAAGG+TGG + chr4_3:48458081-48458100 Msa0644540:CDS 50.0%
!! GTGCAAGGTGGATTTGGTGT+TGG + chr4_3:48458093-48458112 Msa0644540:CDS 50.0%
!! CAAGGTGGATTTGGTGTTGG+TGG + chr4_3:48458096-48458115 Msa0644540:CDS 50.0%
TCCACTGGTAAGAATGGTCG+TGG + chr4_3:48458123-48458142 Msa0644540:CDS 50.0%
TCCACGACCATTCTTACCAG+TGG - chr4_3:48458127-48458146 None:intergenic 50.0%
!! TCCAAAAGGTGCTCTTCTGG+TGG + chr4_3:48458494-48458513 Msa0644540:CDS 50.0%
!! CCAAAAGGTGCTCTTCTGGT+GGG + chr4_3:48458495-48458514 Msa0644540:CDS 50.0%
! AAGGGTTTTTCCTGTGCCTG+GGG - chr4_3:48458523-48458542 None:intergenic 50.0%
!!! GATGGTTTTGGAACCACTGC+TGG + chr4_3:48458792-48458811 Msa0644540:CDS 50.0%
TAGCACAACAACTCCAGCAG+TGG - chr4_3:48458808-48458827 None:intergenic 50.0%
ACAACGCCTTACTTAGGCCT+GGG + chr4_3:48458856-48458875 Msa0644540:CDS 50.0%
AAAACGCCCAGGCCTAAGTA+AGG - chr4_3:48458865-48458884 None:intergenic 50.0%
CTCCAGCAAATCCTGGAGTA+AGG - chr4_3:48459007-48459026 None:intergenic 50.0%
ATGTCTGCTCCAGCAAATCC+TGG - chr4_3:48459014-48459033 None:intergenic 50.0%
AAGCTGCTCTGATTGCTGCA+AGG + chr4_3:48459051-48459070 Msa0644540:CDS 50.0%
ACCGTTGCTTACCATGAAGC+AGG + chr4_3:48459646-48459665 Msa0644540:CDS 50.0%
GCCTGCTTCATGGTAAGCAA+CGG - chr4_3:48459650-48459669 None:intergenic 50.0%
AGAACCAACCTGCAACAGCA+TGG - chr4_3:48459672-48459691 None:intergenic 50.0%
!! TGCTGTTGCAGGTTGGTTCT+TGG + chr4_3:48459672-48459691 Msa0644540:CDS 50.0%
GTCCTGAGAAGGTTCTCACT+AGG - chr4_3:48459772-48459791 None:intergenic 50.0%
! CAGGACAAAGGAGCAGCTTT+TGG + chr4_3:48459786-48459805 Msa0644540:CDS 50.0%
! CTTGTATGACCCTTGGTGGT+CGG + chr4_3:48459815-48459834 Msa0644540:CDS 50.0%
! TTGTATGACCCTTGGTGGTC+GGG + chr4_3:48459816-48459835 Msa0644540:CDS 50.0%
!! ATTGGGAAGCATCAAGGAGC+AGG - chr4_3:48460047-48460066 None:intergenic 50.0%
CTCATTGGAGCAATCTCCAC+TGG + chr4_3:48460120-48460139 Msa0644540:CDS 50.0%
!! CCAAACGCGTCGTCATTTTG+AGG - chr4_3:48460237-48460256 None:intergenic 50.0%
CCTCAAAATGACGACGCGTT+TGG + chr4_3:48460234-48460253 Msa0644540:CDS 50.0%
GCGTTTGGGAAACCATACAG+TGG + chr4_3:48460249-48460268 Msa0644540:CDS 50.0%
GTGGGTTCTGCACTCTTGAA+GGG - chr4_3:48460446-48460465 None:intergenic 50.0%
TGTGGGTTCTGCACTCTTGA+AGG - chr4_3:48460447-48460466 None:intergenic 50.0%
AACCATCGTCGATGAAGCCA+AGG + chr4_3:48460517-48460536 Msa0644540:three_prime_UTR 50.0%
ATCGTCGATGAAGCCAAGGA+GGG + chr4_3:48460521-48460540 Msa0644540:three_prime_UTR 50.0%
!! GTCTTCACCTCTAGAACCTG+AGG + chr4_3:48460550-48460569 Msa0644540:three_prime_UTR 50.0%
! GGAACAACCTCAGGTTCTAG+AGG - chr4_3:48460560-48460579 None:intergenic 50.0%
!! GAAGGAAGTGCCAAAGGGAG+AGG + chr4_3:48455837-48455856 Msa0644540:CDS 55.0%
! TCTCACCCCATTGTTGGTGG+TGG + chr4_3:48456316-48456335 Msa0644540:CDS 55.0%
!! CTCACCCCATTGTTGGTGGT+GGG + chr4_3:48456317-48456336 Msa0644540:CDS 55.0%
CTTACCTGCTGCTGATCACG+AGG - chr4_3:48456371-48456390 None:intergenic 55.0%
CAAAACGGTGACCTGAGTGC+AGG - chr4_3:48456664-48456683 None:intergenic 55.0%
! CTGCACTCAGGTCACCGTTT+TGG + chr4_3:48456662-48456681 Msa0644540:intron 55.0%
GGCGCCTACGACTAAACATC+TGG - chr4_3:48456705-48456724 None:intergenic 55.0%
! TGGCTGGCTATTGCAGAGAC+GGG - chr4_3:48457257-48457276 None:intergenic 55.0%
CAAGCAGACAGCGAAGTCCA+AGG + chr4_3:48457844-48457863 Msa0644540:CDS 55.0%
CCTTTGCAGGAAGGGTTCCT+TGG - chr4_3:48457864-48457883 None:intergenic 55.0%
CCAAGGAACCCTTCCTGCAA+AGG + chr4_3:48457861-48457880 Msa0644540:CDS 55.0%
ACCCTTCCTGCAAAGGGATC+TGG + chr4_3:48457868-48457887 Msa0644540:CDS 55.0%
CACCAGATCCCTTTGCAGGA+AGG - chr4_3:48457873-48457892 None:intergenic 55.0%
CTTCCTGCAAAGGGATCTGG+TGG + chr4_3:48457871-48457890 Msa0644540:CDS 55.0%
!! GAGGAAGCGCAAGAAGCACT+AGG + chr4_3:48457949-48457968 Msa0644540:CDS 55.0%
!! GGTGGATTTGGTGTTGGTGG+TGG + chr4_3:48458099-48458118 Msa0644540:CDS 55.0%
GGTGGCTCCACTGGTAAGAA+TGG + chr4_3:48458117-48458136 Msa0644540:CDS 55.0%
! AGATGTTGCTGGCTGTGACG+AGG + chr4_3:48458398-48458417 Msa0644540:CDS 55.0%
!!! CCCACCAGAAGAGCACCTTT+TGG - chr4_3:48458498-48458517 None:intergenic 55.0%
! AGGGTTTTTCCTGTGCCTGG+GGG - chr4_3:48458522-48458541 None:intergenic 55.0%
AAAGCAACTGCAGGGGAGTC+TGG + chr4_3:48458549-48458568 Msa0644540:CDS 55.0%
!! TTGTCGGTGTTGGACCATCC+AGG + chr4_3:48458616-48458635 Msa0644540:CDS 55.0%
!! TGTCGGTGTTGGACCATCCA+GGG + chr4_3:48458617-48458636 Msa0644540:CDS 55.0%
ATTGGTCGGAAAAGGGGTCG+TGG + chr4_3:48458708-48458727 Msa0644540:CDS 55.0%
GCTGGAGTTGTTGTGCTAGC+AGG + chr4_3:48458810-48458829 Msa0644540:CDS 55.0%
GACAACGCCTTACTTAGGCC+TGG + chr4_3:48458855-48458874 Msa0644540:CDS 55.0%
GCCCTTACTCCAGGATTTGC+TGG + chr4_3:48459002-48459021 Msa0644540:CDS 55.0%
CAACAGCATGGCCTGCTTCA+TGG - chr4_3:48459660-48459679 None:intergenic 55.0%
GCTGCTCCTTTGTCCTGAGA+AGG - chr4_3:48459783-48459802 None:intergenic 55.0%
CTCCTTGGCTTCATCGACGA+TGG - chr4_3:48460522-48460541 None:intergenic 55.0%
CATCGTCGATGAAGCCAAGG+AGG + chr4_3:48460520-48460539 Msa0644540:three_prime_UTR 55.0%
ATGAAGCCAAGGAGGGTGGT+GGG + chr4_3:48460528-48460547 Msa0644540:three_prime_UTR 55.0%
TGGTCCTCGTGATCAGCAGC+AGG + chr4_3:48456364-48456383 Msa0644540:CDS 60.0%
!! GGTCACCGTTTTGGGCCACT+CGG + chr4_3:48456671-48456690 Msa0644540:intron 60.0%
!! GTCACCGTTTTGGGCCACTC+GGG + chr4_3:48456672-48456691 Msa0644540:intron 60.0%
GTGACCCGAGTGGCCCAAAA+CGG - chr4_3:48456679-48456698 None:intergenic 60.0%
TGGCCACCAGATCCCTTTGC+AGG - chr4_3:48457877-48457896 None:intergenic 60.0%
AGGGGTCGTGGAGGTTTCTC+TGG + chr4_3:48458720-48458739 Msa0644540:CDS 60.0%
ATCGTGCGGTCAAAACGCCC+AGG - chr4_3:48458876-48458895 None:intergenic 60.0%
AGGCTTGCAGCCCTTACTCC+AGG + chr4_3:48458993-48459012 Msa0644540:CDS 60.0%
GAAGCAGGCCATGCTGTTGC+AGG + chr4_3:48459661-48459680 Msa0644540:CDS 60.0%
CAGGCCATGCTGTTGCAGGT+TGG + chr4_3:48459665-48459684 Msa0644540:CDS 60.0%
GTCGATGAAGCCAAGGAGGG+TGG + chr4_3:48460524-48460543 Msa0644540:three_prime_UTR 60.0%
GATGAAGCCAAGGAGGGTGG+TGG + chr4_3:48460527-48460546 Msa0644540:three_prime_UTR 60.0%
TGAAGACCCACCACCCTCCT+TGG - chr4_3:48460537-48460556 None:intergenic 60.0%
! CATCTGGAGCGTGACCCGAG+TGG - chr4_3:48456689-48456708 None:intergenic 65.0%
!! GGTGTTGGTGGTGGCTCCAC+TGG + chr4_3:48458108-48458127 Msa0644540:CDS 65.0%
GGTCGGAAAAGGGGTCGTGG+AGG + chr4_3:48458711-48458730 Msa0644540:CDS 65.0%
CTCGCGGCACAGCAGCACTT+GGG + chr4_3:48459731-48459750 Msa0644540:CDS 65.0%
GTGCAGGTGCCCGCGGATCT+TGG - chr4_3:48456648-48456667 None:intergenic 70.0%
ATCCGCGGGCACCTGCACTC+AGG + chr4_3:48456650-48456669 Msa0644540:intron 70.0%
GACCTGAGTGCAGGTGCCCG+CGG - chr4_3:48456655-48456674 None:intergenic 70.0%
! GCTCTTCTGGTGGGTCCCCC+AGG + chr4_3:48458504-48458523 Msa0644540:CDS 70.0%
! CCAAGTGCTGCTGTGCCGCG+AGG - chr4_3:48459733-48459752 None:intergenic 70.0%
CCTCGCGGCACAGCAGCACT+TGG + chr4_3:48459730-48459749 Msa0644540:CDS 70.0%
CTCGGCAGCCCGACCACCAA+GGG - chr4_3:48459827-48459846 None:intergenic 70.0%
! CTGGTGGGTCCCCCAGGCAC+AGG + chr4_3:48458510-48458529 Msa0644540:CDS 75.0%
GCTCGGCAGCCCGACCACCA+AGG - chr4_3:48459828-48459847 None:intergenic 75.0%
TGGTGGTCGGGCTGCCGAGC+AGG + chr4_3:48459828-48459847 Msa0644540:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 48455197 48460770 48455197 ID=Msa0644540;Name=Msa0644540
chr4_3 mRNA 48455197 48460770 48455197 ID=Msa0644540-mRNA-1;Parent=Msa0644540;Name=Msa0644540-mRNA-1;_AED=0.06;_eAED=0.06;_QI=149|1|1|1|1|1|8|282|774
chr4_3 exon 48455197 48455396 48455197 ID=Msa0644540-mRNA-1:exon:11497;Parent=Msa0644540-mRNA-1
chr4_3 exon 48455480 48455702 48455480 ID=Msa0644540-mRNA-1:exon:11498;Parent=Msa0644540-mRNA-1
chr4_3 exon 48455809 48455880 48455809 ID=Msa0644540-mRNA-1:exon:11499;Parent=Msa0644540-mRNA-1
chr4_3 exon 48456246 48456385 48456246 ID=Msa0644540-mRNA-1:exon:11500;Parent=Msa0644540-mRNA-1
chr4_3 exon 48457733 48458203 48457733 ID=Msa0644540-mRNA-1:exon:11501;Parent=Msa0644540-mRNA-1
chr4_3 exon 48458387 48459154 48458387 ID=Msa0644540-mRNA-1:exon:11502;Parent=Msa0644540-mRNA-1
chr4_3 exon 48459622 48459849 48459622 ID=Msa0644540-mRNA-1:exon:11503;Parent=Msa0644540-mRNA-1
chr4_3 exon 48460117 48460770 48460117 ID=Msa0644540-mRNA-1:exon:11504;Parent=Msa0644540-mRNA-1
chr4_3 five_prime_UTR 48455197 48455345 48455197 ID=Msa0644540-mRNA-1:five_prime_utr;Parent=Msa0644540-mRNA-1
chr4_3 CDS 48455346 48455396 48455346 ID=Msa0644540-mRNA-1:cds;Parent=Msa0644540-mRNA-1
chr4_3 CDS 48455480 48455702 48455480 ID=Msa0644540-mRNA-1:cds;Parent=Msa0644540-mRNA-1
chr4_3 CDS 48455809 48455880 48455809 ID=Msa0644540-mRNA-1:cds;Parent=Msa0644540-mRNA-1
chr4_3 CDS 48456246 48456385 48456246 ID=Msa0644540-mRNA-1:cds;Parent=Msa0644540-mRNA-1
chr4_3 CDS 48457733 48458203 48457733 ID=Msa0644540-mRNA-1:cds;Parent=Msa0644540-mRNA-1
chr4_3 CDS 48458387 48459154 48458387 ID=Msa0644540-mRNA-1:cds;Parent=Msa0644540-mRNA-1
chr4_3 CDS 48459622 48459849 48459622 ID=Msa0644540-mRNA-1:cds;Parent=Msa0644540-mRNA-1
chr4_3 CDS 48460117 48460488 48460117 ID=Msa0644540-mRNA-1:cds;Parent=Msa0644540-mRNA-1
chr4_3 three_prime_UTR 48460489 48460770 48460489 ID=Msa0644540-mRNA-1:three_prime_utr;Parent=Msa0644540-mRNA-1
Gene Sequence

>Msa0644540

ATGATTTTTTCAAGAATTGGGCGTTCTCTATCGCGTTCTTCTCGCGTTAAAAATTTGTTGCACGGTGAAGCAAGATTGGGAACGCTTTATGGAGTTTCGAGAACGAATGTTTTTATCGATGATGTTGAAAAGGGATTAGGGTTTTTAAGGGGTTATGTATCTTCTGCCATAGCTCGTAATAATGGGTTTGCTTCAAATTTGTATGATTTTAAATCAATTGCTGCAAACCCTAGGCTTCATCGCATGTTTTCGAGCGAATCCCCAAAGAAAAAGAATTATGAAAAGTTTTATCCCAAGGAAAAGAAGGAAGTGCCAAAGGGAGAGGAGAAAAAATCTGAGTCTAAAGATGAGTCAAAGTCAAACACAGAGGATGGAGGAAGTTTTCACGAAGCTTTTATCAAACAGTTTCAAAACTATCTCACCCCATTGTTGGTGGTGGGACTATTTCTTTCATCCCTTTCTCTTGGTCCTCGTGATCAGCAGCAGATTAGTTTCCAGGAGTTTAAAAATAAGCTTTTGGAACCAGGATTAGTAGACCATATTGTTGTCTCCAACAAATCAGTTGCCAAAATATATGTGAGGAACTCTCCCCTTAATCAAGCAGACAGCGAAGTCCAAGGAACCCTTCCTGCAAAGGGATCTGGTGGCCAATTTAAATATGTAATCAATATTGGAAGTGTTGAGTCTTTTGAGGAGAAGTTAGAGGAAGCGCAAGAAGCACTAGGCGTTGACTCTCACAATTTTGTACCTGTTATATATTCTTCTGAAATGGTTTGGTACCAGGAGTTAATGAGATTTGCGCCAACCCTGTTGATTTTGGGAACTCTCTGGTTTATGGGAAGGAAAGTGCAAGGTGGATTTGGTGTTGGTGGTGGCTCCACTGGTAAGAATGGTCGTGGAATATTTAACATTGGAAAAGCACAAGTTACTAAAGTAGACAAAAATACCAAAAACAAGGTTTATTTTAAAGATGTTGCTGGCTGTGACGAGGCAAAGCAAGAAATTATGGAGTTTGTGCACTTCCTCAAGAATCCTAAGAAATACGAAGAGCTTGGTGCCAAAATTCCAAAAGGTGCTCTTCTGGTGGGTCCCCCAGGCACAGGAAAAACCCTTTTAGCAAAAGCAACTGCAGGGGAGTCTGGTGTGCCATTTCTTTCCATATCTGGTTCTGATTTCATGGAAATGTTTGTCGGTGTTGGACCATCCAGGGTGAGAAACTTGTTTCACGAAGCAAGGCAGTGTGCTCCCAGTATAGTATTTATTGATGAGATTGATGCAATTGGTCGGAAAAGGGGTCGTGGAGGTTTCTCTGGTTCAAATGATGAGCGTGAAAGTACTTTAAATCAATTGTTGGTGGAAATGGATGGTTTTGGAACCACTGCTGGAGTTGTTGTGCTAGCAGGTACAAATAGAGCTGATATATTAGACAACGCCTTACTTAGGCCTGGGCGTTTTGACCGCACGATATCAATTGATGTACCTGACATTAAAGGTCGTGACCAGATATTTCAGATTTATTTGAAAAAAATCAAACTTGACCACGAGCCTTCATATTATTCTCAAAGGCTTGCAGCCCTTACTCCAGGATTTGCTGGAGCAGACATTGCTAATGTTTGCAATGAAGCTGCTCTGATTGCTGCAAGGACTGATGAATCACAAGTCACAATGGATCATTTCGAGGCAGCTATCGATAGGATCATTGGTGGTTTGGAGAAGAAGAACAGGGTAATAAGTAAGCTGGAAAGGCGTACCGTTGCTTACCATGAAGCAGGCCATGCTGTTGCAGGTTGGTTCTTGGAACATTGTGAGCCATTGTTGAAAGTAACTATTGTTCCTCGCGGCACAGCAGCACTTGGGTTTGCCCAATATGTTCCTAGTGAGAACCTTCTCAGGACAAAGGAGCAGCTTTTGGATATGACTTGTATGACCCTTGGTGGTCGGGCTGCCGAGCAGGTTCTCATTGGAGCAATCTCCACTGGAGCACAAAATGACTTGGAGAAAGTGACCAAGATGACATATGCCCAAATAGCCATCTATGGTTTCAGTGAAAAAGTGGGCCTCCTCTCTTTCCCTCAAAATGACGACGCGTTTGGGAAACCATACAGTGGCGATACTGGTAACATCATTGATCAGGAAGTGCGAGATTGGGTGAAACATGCATATGAACGTACCATACAGCTTATAGAAGAACACAAGGAGAAAATAGCTCAAATTGCAGAGTTACTTCTCGAAAAAGAAGTACTTCACCAAGATGACTTGGTTCGAATCTTGGTGAACGACCCTTCAAGAGTGCAGAACCCACAAATTACGATAGATTTAAGCTAG
Protein sequence

>Msa0644540

MIFSRIGRSLSRSSRVKNLLHGEARLGTLYGVSRTNVFIDDVEKGLGFLRGYVSSAIARNNGFASNLYDFKSIAANPRLHRMFSSESPKKKNYEKFYPKEKKEVPKGEEKKSESKDESKSNTEDGGSFHEAFIKQFQNYLTPLLVVGLFLSSLSLGPRDQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKIYVRNSPLNQADSEVQGTLPAKGSGGQFKYVINIGSVESFEEKLEEAQEALGVDSHNFVPVIYSSEMVWYQELMRFAPTLLILGTLWFMGRKVQGGFGVGGGSTGKNGRGIFNIGKAQVTKVDKNTKNKVYFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFHEARQCAPSIVFIDEIDAIGRKRGRGGFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRADILDNALLRPGRFDRTISIDVPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARTDESQVTMDHFEAAIDRIIGGLEKKNRVISKLERRTVAYHEAGHAVAGWFLEHCEPLLKVTIVPRGTAALGFAQYVPSENLLRTKEQLLDMTCMTLGGRAAEQVLIGAISTGAQNDLEKVTKMTYAQIAIYGFSEKVGLLSFPQNDDAFGKPYSGDTGNIIDQEVRDWVKHAYERTIQLIEEHKEKIAQIAELLLEKEVLHQDDLVRILVNDPSRVQNPQITIDLS*