AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0644530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644530 MtrunA17_Chr4g0031821 89.839 807 43 4 1 768 1 807 0.0 1424
Msa0644530 MtrunA17_Chr7g0260601 67.054 689 135 10 117 727 14 688 0.0 872
Msa0644530 MtrunA17_Chr6g0476861 65.821 670 166 10 126 755 28 674 0.0 828
Msa0644530 MtrunA17_Chr7g0248361 68.463 631 159 10 126 727 23 642 0.0 826
Msa0644530 MtrunA17_Chr3g0094871 72.973 444 80 6 303 721 11 439 0.0 639
Msa0644530 MtrunA17_Chr1g0168321 62.340 547 125 8 126 657 23 503 0.0 632
Msa0644530 MtrunA17_Chr3g0143721 45.575 452 206 8 303 718 249 696 3.59e-123 385
Msa0644530 MtrunA17_Chr2g0297281 44.035 461 219 11 303 731 286 739 2.34e-112 358
Msa0644530 MtrunA17_Chr4g0052411 44.912 452 209 11 303 720 229 674 7.48e-112 355
Msa0644530 MtrunA17_Chr7g0217421 49.859 355 148 8 303 632 39 388 5.75e-105 327
Msa0644530 MtrunA17_Chr5g0429571 43.953 430 199 11 303 692 313 740 2.88e-96 317
Msa0644530 MtrunA17_Chr3g0135721 40.667 450 223 11 305 722 226 663 2.12e-95 312
Msa0644530 MtrunA17_Chr3g0135761 39.956 453 230 10 305 728 224 663 6.10e-93 305
Msa0644530 MtrunA17_Chr1g0158881 40.724 442 216 10 305 718 331 754 2.65e-92 305
Msa0644530 MtrunA17_Chr8g0362771 37.991 458 243 9 300 728 234 679 3.85e-91 301
Msa0644530 MtrunA17_Chr3g0104211 41.860 430 208 8 303 692 304 731 1.79e-90 301
Msa0644530 MtrunA17_Chr5g0432631 38.983 472 244 12 269 709 194 652 9.70e-86 290
Msa0644530 MtrunA17_Chr5g0432641 37.471 435 229 11 305 709 193 614 2.35e-76 259
Msa0644530 MtrunA17_Chr8g0388371 32.172 488 259 11 299 722 400 879 1.53e-66 237
Msa0644530 MtrunA17_Chr6g0456351 47.148 263 113 3 303 543 317 575 8.66e-66 229
Msa0644530 MtrunA17_Chr2g0331161 36.830 448 233 13 303 718 415 844 4.00e-65 233
Msa0644530 MtrunA17_Chr3g0129971 30.308 650 363 21 150 729 116 745 1.92e-57 210
Msa0644530 MtrunA17_Chr8g0392981 73.950 119 29 1 603 719 1 119 6.54e-52 176
Msa0644530 MtrunA17_Chr8g0392971 82.353 102 18 0 493 594 51 152 2.45e-51 176
Msa0644530 MtrunA17_Chr3g0135781 52.071 169 63 3 300 457 52 213 9.09e-49 171
Msa0644530 MtrunA17_Chr4g0050561 38.132 257 134 4 308 541 161 415 1.15e-45 169
Msa0644530 MtrunA17_Chr8g0345461 38.521 257 132 5 300 533 162 415 4.89e-45 167
Msa0644530 MtrunA17_Chr8g0357301 27.875 513 282 16 297 739 464 958 5.41e-44 171
Msa0644530 MtrunA17_Chr1g0200081 38.132 257 132 6 300 533 172 424 6.64e-43 161
Msa0644530 MtrunA17_Chr1g0182711 39.676 247 123 5 305 528 190 433 1.60e-42 160
Msa0644530 MtrunA17_Chr1g0192151 37.449 243 126 5 305 524 169 408 4.73e-42 159
Msa0644530 MtrunA17_Chr4g0014731 37.449 243 126 5 305 524 170 409 5.91e-42 158
Msa0644530 MtrunA17_Chr7g0262801 39.676 247 123 5 305 528 189 432 6.28e-42 159
Msa0644530 MtrunA17_Chr7g0255721 38.645 251 125 6 302 527 684 930 3.23e-41 162
Msa0644530 MtrunA17_Chr7g0255721 37.674 215 109 5 334 527 416 626 1.19e-25 113
Msa0644530 MtrunA17_Chr7g0255641 37.402 254 124 7 302 527 657 903 4.85e-40 159
Msa0644530 MtrunA17_Chr7g0255641 37.696 191 96 5 341 512 432 618 1.11e-23 107
Msa0644530 MtrunA17_Chr2g0327121 41.304 230 111 6 302 509 479 706 7.74e-40 157
Msa0644530 MtrunA17_Chr2g0327121 39.224 232 110 6 302 509 206 430 2.92e-36 146
Msa0644530 MtrunA17_Chr3g0108321 45.930 172 83 3 300 462 156 326 2.21e-39 149
Msa0644530 MtrunA17_Chr1g0180791 40.000 230 114 5 302 509 477 704 5.85e-39 155
Msa0644530 MtrunA17_Chr1g0180791 38.362 232 112 6 302 509 204 428 1.78e-34 141
Msa0644530 MtrunA17_Chr7g0264521 39.738 229 110 6 305 509 481 705 1.80e-38 153
Msa0644530 MtrunA17_Chr7g0264521 37.662 231 115 6 302 509 205 429 8.18e-34 139
Msa0644530 MtrunA17_Chr3g0145011 36.546 249 132 5 302 527 138 383 9.42e-38 145
Msa0644530 MtrunA17_Chr5g0432391 28.505 428 224 12 305 709 54 422 1.07e-37 146
Msa0644530 MtrunA17_Chr3g0141901 36.546 249 132 5 302 527 135 380 1.91e-37 145
Msa0644530 MtrunA17_Chr7g0255651 37.662 231 118 5 302 509 281 508 2.25e-36 145
Msa0644530 MtrunA17_Chr7g0255651 27.602 221 119 7 322 509 29 241 2.13e-12 70.5
Msa0644530 MtrunA17_Chr2g0277831 38.224 259 115 7 280 509 227 469 3.00e-34 140
Msa0644530 MtrunA17_Chr2g0277831 36.522 230 117 5 302 507 532 756 3.78e-34 140
Msa0644530 MtrunA17_Chr3g0135791 31.557 244 161 4 488 728 19 259 4.96e-34 132
Msa0644530 MtrunA17_Chr7g0255901 33.198 247 138 5 287 509 623 866 9.03e-33 136
Msa0644530 MtrunA17_Chr1g0190401 39.888 178 97 2 298 466 672 848 9.99e-32 133
Msa0644530 MtrunA17_Chr2g0327231 43.293 164 81 4 302 455 345 506 5.91e-31 127
Msa0644530 MtrunA17_Chr7g0255691 34.766 256 138 7 293 523 277 528 3.02e-29 123
Msa0644530 MtrunA17_Chr7g0255691 34.231 260 113 12 308 523 22 267 4.70e-20 94.7
Msa0644530 MtrunA17_Chr3g0086401 40.449 178 87 4 303 468 385 555 1.40e-28 122
Msa0644530 MtrunA17_Chr3g0086401 34.081 223 109 6 305 496 94 309 7.25e-26 113
Msa0644530 MtrunA17_Chr4g0004121 34.576 295 143 12 303 554 242 529 5.78e-28 119
Msa0644530 MtrunA17_Chr4g0033451 31.322 348 180 12 229 527 292 629 6.28e-28 121
Msa0644530 MtrunA17_Chr8g0387641 34.348 230 123 7 303 509 521 745 6.33e-28 120
Msa0644530 MtrunA17_Chr4g0052271 37.238 239 123 8 299 515 115 348 1.04e-27 116
Msa0644530 MtrunA17_Chr2g0321241 38.496 226 105 10 300 500 129 345 1.67e-27 116
Msa0644530 MtrunA17_Chr4g0043381 33.186 226 122 6 305 507 839 1058 3.33e-27 119
Msa0644530 MtrunA17_Chr4g0026631 38.222 225 107 10 300 500 124 340 8.69e-27 114
Msa0644530 MtrunA17_Chr3g0086411 40.361 166 86 3 303 459 215 376 1.13e-26 114
Msa0644530 MtrunA17_Chr3g0086411 33.333 150 69 4 382 507 7 149 2.32e-12 70.1
Msa0644530 MtrunA17_Chr3g0127401 33.878 245 120 11 295 509 73 305 2.00e-26 112
Msa0644530 MtrunA17_Chr6g0462581 34.783 230 121 8 303 509 500 723 2.04e-26 115
Msa0644530 MtrunA17_Chr4g0038101 34.335 233 118 9 299 504 717 941 2.98e-26 115
Msa0644530 MtrunA17_Chr5g0397121 33.478 230 125 7 303 509 513 737 1.57e-25 113
Msa0644530 MtrunA17_Chr1g0204031 34.914 232 121 9 302 509 556 781 5.86e-25 111
Msa0644530 MtrunA17_Chr1g0202371 33.613 238 123 10 293 504 387 615 2.06e-24 109
Msa0644530 MtrunA17_Chr1g0195731 34.632 231 122 8 303 509 934 1159 2.76e-24 109
Msa0644530 MtrunA17_Chr3g0127431 32.245 245 124 11 295 509 76 308 1.06e-23 104
Msa0644530 MtrunA17_Chr1g0202381 32.599 227 123 7 302 504 467 687 1.15e-23 107
Msa0644530 MtrunA17_Chr2g0316851 32.479 234 123 7 305 509 596 823 1.48e-23 107
Msa0644530 MtrunA17_Chr7g0246111 32.353 238 116 9 303 509 212 435 1.68e-23 105
Msa0644530 MtrunA17_Chr1g0195741 33.766 231 124 8 303 509 938 1163 3.13e-23 106
Msa0644530 MtrunA17_Chr3g0116131 34.071 226 120 8 303 504 902 1122 6.68e-23 105
Msa0644530 MtrunA17_Chr6g0459541 36.000 200 110 8 298 485 37 230 6.73e-22 98.2
Msa0644530 MtrunA17_Chr4g0047411 34.137 249 112 8 328 528 202 446 1.93e-21 99.8
Msa0644530 MtrunA17_Chr6g0459561 34.934 229 115 9 303 505 382 602 2.12e-21 99.4
Msa0644530 MtrunA17_Chr3g0135741 36.508 126 78 2 484 608 13 137 2.54e-17 79.7
Msa0644530 MtrunA17_Chr6g0459551 37.576 165 83 8 303 456 102 257 7.44e-17 84.0
Msa0644530 MtrunA17_Chr2g0289231 30.508 236 125 9 298 503 292 518 8.37e-17 84.7
Msa0644530 MtrunA17_Chr5g0432671 39.048 105 59 2 484 588 3 102 2.30e-15 72.8
Msa0644530 MtrunA17_Chr3g0134831 31.892 185 96 6 312 472 50 228 2.75e-13 71.2
Msa0644530 MtrunA17_Chr4g0062081 44.928 69 37 1 307 374 11 79 2.20e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644530 AT1G07510.1 69.024 820 195 10 1 768 1 813 0.0 1068
Msa0644530 AT2G29080.1 68.780 820 190 15 1 768 4 809 0.0 1030
Msa0644530 AT1G50250.1 45.796 452 205 9 303 718 259 706 1.06e-122 384
Msa0644530 AT5G42270.1 44.912 452 209 8 303 718 247 694 8.04e-119 374
Msa0644530 AT5G15250.1 45.043 464 212 13 303 732 221 675 9.49e-113 357
Msa0644530 AT1G06430.1 44.444 459 218 11 303 730 217 669 1.31e-112 357
Msa0644530 AT1G06430.3 44.444 459 218 11 303 730 217 669 1.31e-112 357
Msa0644530 AT1G06430.2 44.444 459 218 11 303 730 217 669 1.31e-112 357
Msa0644530 AT2G30950.1 44.035 461 217 12 303 730 224 676 2.71e-111 354
Msa0644530 AT2G30950.2 44.035 461 217 12 303 730 224 676 2.71e-111 354
Msa0644530 AT2G30950.3 44.035 461 217 12 303 730 224 676 2.71e-111 354
Msa0644530 AT2G30950.4 44.035 461 217 12 303 730 228 680 2.89e-111 354
Msa0644530 AT2G26140.1 42.130 432 212 9 305 709 226 646 3.84e-97 317
Msa0644530 AT5G58870.1 43.953 430 202 8 303 694 326 754 5.08e-97 319
Msa0644530 AT5G53170.1 42.141 439 214 10 305 718 361 784 1.19e-95 315
Msa0644530 AT3G47060.1 43.548 434 206 9 299 694 318 750 3.01e-95 314
Msa0644530 AT5G15250.2 48.322 298 105 5 303 555 221 514 1.04e-81 270
Msa0644530 AT3G02450.1 48.425 254 105 3 303 534 331 580 3.05e-66 231
Msa0644530 AT4G23940.1 31.687 486 264 10 299 722 423 902 5.07e-63 228
Msa0644530 AT3G16290.1 34.889 450 244 12 303 719 407 840 2.78e-60 219
Msa0644530 AT5G64580.1 29.913 692 396 21 109 729 90 763 6.77e-59 215
Msa0644530 AT5G19990.2 38.521 257 133 4 308 541 105 359 2.78e-46 169
Msa0644530 AT5G19990.1 38.521 257 133 4 308 541 163 417 1.02e-45 169
Msa0644530 AT5G19990.3 38.521 257 133 4 308 541 163 417 1.02e-45 169
Msa0644530 AT5G20000.1 38.521 257 133 4 308 541 163 417 1.09e-45 169
Msa0644530 AT1G53750.1 38.521 257 132 5 300 533 162 415 7.23e-45 167
Msa0644530 AT1G79560.1 25.841 565 342 15 242 742 434 985 9.90e-44 171
Msa0644530 AT1G79560.2 25.627 558 342 14 242 739 434 978 1.21e-43 171
Msa0644530 AT3G05530.1 38.272 243 124 5 305 524 170 409 8.50e-43 161
Msa0644530 AT1G53780.3 37.743 257 134 5 300 533 333 586 1.18e-42 164
Msa0644530 AT1G53780.1 37.743 257 134 5 300 533 334 587 1.24e-42 164
Msa0644530 AT1G53780.4 37.743 257 134 5 300 533 334 587 1.24e-42 164
Msa0644530 AT1G53780.2 37.743 257 134 5 300 533 355 608 1.42e-42 164
Msa0644530 AT5G58290.1 38.367 245 125 5 300 521 149 390 1.90e-42 160
Msa0644530 AT1G79560.3 26.172 512 312 13 242 700 434 932 1.91e-42 167
Msa0644530 AT4G29040.1 39.676 247 123 5 305 528 187 430 3.51e-42 160
Msa0644530 AT2G20140.1 39.676 247 123 5 305 528 187 430 1.31e-41 158
Msa0644530 AT1G09100.1 37.449 243 126 5 305 524 169 408 1.57e-41 157
Msa0644530 AT3G56690.1 37.849 251 127 6 302 527 720 966 2.48e-41 163
Msa0644530 AT3G56690.1 37.688 199 95 5 334 509 413 605 1.74e-26 117
Msa0644530 AT5G03340.1 40.435 230 113 6 302 509 476 703 8.68e-40 158
Msa0644530 AT5G03340.1 37.500 248 122 7 302 525 203 441 1.53e-34 142
Msa0644530 AT3G53230.1 40.870 230 112 6 302 509 477 704 4.85e-39 155
Msa0644530 AT3G53230.1 37.037 243 124 6 302 521 204 440 3.16e-34 140
Msa0644530 AT3G09840.1 39.738 229 117 4 302 509 476 704 7.83e-39 155
Msa0644530 AT3G09840.1 37.652 247 121 7 303 525 204 441 2.12e-34 141
Msa0644530 AT5G43010.1 36.145 249 133 5 302 527 135 380 3.86e-38 147
Msa0644530 AT1G45000.1 36.145 249 133 5 302 527 135 380 8.37e-38 146
Msa0644530 AT3G01610.1 38.800 250 107 9 288 500 214 454 1.64e-33 138
Msa0644530 AT3G01610.1 34.432 273 133 9 303 536 525 790 8.94e-28 120
Msa0644530 AT3G01610.2 38.800 250 107 9 288 500 214 454 1.85e-33 138
Msa0644530 AT3G01610.2 34.432 273 133 9 303 536 525 790 1.02e-27 120
Msa0644530 AT3G04340.1 40.936 171 91 2 305 466 783 952 2.45e-31 132
Msa0644530 AT1G03000.1 34.914 232 122 6 303 509 655 882 4.59e-31 131
Msa0644530 AT1G64110.5 33.333 285 157 9 303 559 516 795 8.57e-29 124
Msa0644530 AT1G64110.3 33.333 285 157 9 303 559 516 795 8.57e-29 124
Msa0644530 AT1G64110.2 33.333 285 157 9 303 559 518 797 8.90e-29 124
Msa0644530 AT1G64110.4 33.333 285 157 9 303 559 518 797 8.90e-29 124
Msa0644530 AT1G64110.1 33.333 285 157 9 303 559 513 792 9.80e-29 123
Msa0644530 AT1G05910.1 33.101 287 153 8 284 537 355 635 1.37e-28 123
Msa0644530 AT2G03670.1 32.812 256 144 6 293 523 274 526 4.77e-28 120
Msa0644530 AT2G03670.1 29.412 306 168 10 307 573 23 319 1.90e-24 109
Msa0644530 AT5G08470.3 34.335 233 110 8 305 507 834 1053 1.00e-27 120
Msa0644530 AT5G08470.1 34.335 233 110 8 305 507 843 1062 1.14e-27 120
Msa0644530 AT4G28000.3 33.913 230 123 7 303 509 517 740 1.27e-26 117
Msa0644530 AT4G28000.1 33.913 230 123 7 303 509 515 738 1.33e-26 117
Msa0644530 AT4G28000.2 33.913 230 123 7 303 509 517 740 1.39e-26 117
Msa0644530 AT4G02480.1 30.000 300 155 9 303 552 960 1254 4.69e-26 115
Msa0644530 AT1G80350.1 35.341 249 124 9 303 521 236 477 7.71e-26 112
Msa0644530 AT3G15120.1 34.454 238 121 6 299 507 712 943 1.37e-25 114
Msa0644530 AT3G15120.2 34.454 238 121 6 299 507 722 953 1.44e-25 114
Msa0644530 AT4G27680.1 34.298 242 123 10 295 509 73 305 2.20e-25 109
Msa0644530 AT2G27600.1 36.283 226 110 10 300 500 126 342 2.35e-25 110
Msa0644530 AT5G52882.1 33.478 230 124 7 303 509 514 737 3.03e-25 112
Msa0644530 AT2G45500.4 32.900 231 124 8 303 509 80 303 3.59e-25 108
Msa0644530 AT2G45500.3 32.900 231 124 8 303 509 80 303 3.59e-25 108
Msa0644530 AT2G03670.2 29.412 306 168 10 307 573 23 319 5.49e-25 108
Msa0644530 AT2G03670.2 36.242 149 85 3 293 432 274 421 1.13e-15 80.5
Msa0644530 AT2G34560.1 36.481 233 122 8 299 509 96 324 6.39e-25 108
Msa0644530 AT5G53540.1 33.884 242 124 9 295 509 76 308 7.62e-25 108
Msa0644530 AT2G34560.2 36.481 233 122 8 299 509 105 333 8.32e-25 107
Msa0644530 AT2G45500.2 32.900 231 124 8 303 509 213 436 1.48e-24 108
Msa0644530 AT2G45500.1 32.900 231 124 8 303 509 217 440 1.56e-24 108
Msa0644530 AT2G45500.5 32.900 231 124 8 303 509 223 446 1.82e-24 108
Msa0644530 AT1G50140.2 34.335 233 118 9 299 504 685 909 2.33e-24 110
Msa0644530 AT1G50140.5 34.335 233 118 9 299 504 685 909 2.33e-24 110
Msa0644530 AT1G50140.3 34.335 233 118 9 299 504 707 931 2.63e-24 109
Msa0644530 AT1G50140.1 34.335 233 118 9 299 504 707 931 2.63e-24 109
Msa0644530 AT1G50140.4 34.335 233 118 9 299 504 707 931 2.63e-24 109
Msa0644530 AT1G02890.1 28.667 300 159 9 303 552 941 1235 9.11e-24 108
Msa0644530 AT3G19740.1 34.348 230 122 9 299 504 697 921 1.49e-23 107
Msa0644530 AT1G45000.2 30.638 235 101 5 302 527 135 316 2.72e-23 102
Msa0644530 AT4G24860.3 31.696 224 128 6 303 504 815 1035 3.03e-21 100
Msa0644530 AT4G24860.1 31.696 224 128 6 303 504 817 1037 3.14e-21 100
Msa0644530 AT4G24860.4 31.696 224 128 6 303 504 790 1010 3.83e-21 99.8
Msa0644530 AT4G24860.2 31.696 224 128 6 303 504 813 1033 3.91e-21 99.8
Msa0644530 AT3G27120.1 34.348 230 117 9 302 505 399 620 6.94e-21 98.2
Msa0644530 AT4G04910.1 34.746 236 106 9 328 525 239 464 2.43e-20 96.7
Msa0644530 AT1G62130.2 32.000 225 114 8 303 504 743 951 5.85e-20 95.9
Msa0644530 AT1G62130.1 32.000 225 114 8 303 504 750 958 6.80e-20 95.9
Msa0644530 AT4G04180.2 29.694 229 128 8 302 503 310 532 1.87e-17 87.0
Msa0644530 AT4G04180.1 29.694 229 128 8 302 503 315 537 2.18e-17 87.0
Msa0644530 AT5G08470.2 34.868 152 80 5 305 444 843 987 5.88e-17 86.3
Msa0644530 AT1G02890.2 26.370 292 148 8 303 552 941 1207 1.33e-16 85.1

Find 203 sgRNAs with CRISPR-Local

Find 418 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCGCCAACCCTGTTGATTT+TGG 0.144951 4_3:-48439600 Msa0644530:CDS
TTTGGGAACTCTCTGGTTTA+TGG 0.154517 4_3:-48439582 Msa0644530:CDS
GCAAGATTGGGAACGCTTTA+TGG 0.172434 4_3:-48442144 Msa0644530:CDS
GTGCCATTTCTTTCCATATC+TGG 0.205745 4_3:-48439071 Msa0644530:CDS
TGAAACCATAGATGGCTATT+TGG 0.222849 4_3:+48437459 None:intergenic
CCAAGCTCTTCGTATTTCTT+AGG 0.226217 4_3:+48439182 None:intergenic
TATTGATTACATATTTAAAT+TGG 0.233644 4_3:+48439750 None:intergenic
CATATCTGGTTCTGATTTCA+TGG 0.234533 4_3:-48439057 Msa0644530:CDS
CTCATCAATAAATACTATAC+TGG 0.248136 4_3:+48438968 None:intergenic
TGCTGTTGCAGGTTGGTTCT+TGG 0.252343 4_3:-48437971 Msa0644530:CDS
AGAGTTCCTCACATATATTT+TGG 0.256411 4_3:+48439831 None:intergenic
CAGGACAAAGGAGCAGCTTT+TGG 0.256747 4_3:-48437857 Msa0644530:CDS
CTTCGCTGTCTGCTTGATTA+AGG 0.261277 4_3:+48439807 None:intergenic
TTCTCTGCAGATTAGTTTCC+AGG 0.261767 4_3:-48439920 Msa0644530:intron
CTCAAAATGACGACGCGTTT+GGG 0.272158 4_3:-48437409 Msa0644530:CDS
CCTCAAAATGACGACGCGTT+TGG 0.275529 4_3:-48437410 Msa0644530:CDS
GATGATGTTGAAAAGGGATT+AGG 0.281494 4_3:-48442096 Msa0644530:CDS
TCAAATAAATCTGAAATATC+TGG 0.292729 4_3:+48438715 None:intergenic
AGATGACTTGGTTCGAATCT+TGG 0.302830 4_3:-48437231 Msa0644530:CDS
CGAGGCAAAGCAAGAAATTA+TGG 0.326964 4_3:-48439228 Msa0644530:CDS
AGGAAAGTGCAAGGTGGATT+TGG 0.333587 4_3:-48439557 Msa0644530:CDS
CATGAAATCAGAACCAGATA+TGG 0.334227 4_3:+48439058 None:intergenic
TTGGGAACTCTCTGGTTTAT+GGG 0.337589 4_3:-48439581 Msa0644530:CDS
AAATCAATTGTTGGTGGAAA+TGG 0.339562 4_3:-48438874 Msa0644530:CDS
AATTCCAAAAGGTGCTCTTC+TGG 0.340894 4_3:-48439153 Msa0644530:CDS
TGGTGGTCGGGCTGCCGAGC+AGG 0.341124 4_3:-48437815 Msa0644530:intron
GCCCTTACTCCAGGATTTGC+TGG 0.341796 4_3:-48438642 Msa0644530:CDS
CCTTTGCAGGAAGGGTTCCT+TGG 0.342572 4_3:+48439783 None:intergenic
TGTGGGTTCTGCACTCTTGA+AGG 0.349056 4_3:+48437199 None:intergenic
TCTGCCATAGCTCGTAATAA+TGG 0.355581 4_3:-48442051 Msa0644530:CDS
CGATAGGATCATTGGTGGTT+TGG 0.356353 4_3:-48438526 Msa0644530:CDS
ATGATGTTGAAAAGGGATTA+GGG 0.357188 4_3:-48442095 Msa0644530:CDS
GAAACCATAGATGGCTATTT+GGG 0.358295 4_3:+48437460 None:intergenic
CTGCCATAGCTCGTAATAAT+GGG 0.361252 4_3:-48442050 Msa0644530:CDS
GATGACTTGGTTCGAATCTT+GGG 0.367294 4_3:-48437230 Msa0644530:CDS
TTGATCAGGAAGTGCGAGAT+TGG 0.371100 4_3:-48437355 Msa0644530:CDS
CAACAGCATGGCCTGCTTCA+TGG 0.372235 4_3:+48437986 None:intergenic
TGGCCACCAGATCCCTTTGC+AGG 0.378325 4_3:+48439770 None:intergenic
CCTCGCGGCACAGCAGCACT+TGG 0.379585 4_3:-48437913 Msa0644530:CDS
GAAATAGACTTTGATTAGCT+TGG 0.380375 4_3:+48436921 None:intergenic
TTTCTTTCATCCCTTTCTCT+TGG 0.380958 4_3:-48441298 Msa0644530:CDS
TGTTATATATTCTTCTGAAA+TGG 0.383217 4_3:-48439648 Msa0644530:CDS
GTTGCACGGTGAAGCAAGAT+TGG 0.387025 4_3:-48442157 Msa0644530:CDS
GGTTCTCACTAGGAACATAT+TGG 0.390805 4_3:+48437884 None:intergenic
TATATTCTTCTGAAATGGTT+TGG 0.391866 4_3:-48439643 Msa0644530:CDS
AAAGCAACTGCAGGGGAGTC+TGG 0.399715 4_3:-48439095 Msa0644530:CDS
ACCCTTCCTGCAAAGGGATC+TGG 0.404556 4_3:-48439776 Msa0644530:CDS
TATGCCCAAATAGCCATCTA+TGG 0.410083 4_3:-48437464 Msa0644530:CDS
TTGATGCAATTGGTCGGAAA+AGG 0.411767 4_3:-48438944 Msa0644530:CDS
TTCGCTGTCTGCTTGATTAA+GGG 0.413434 4_3:+48439808 None:intergenic
CCCACCAGAAGAGCACCTTT+TGG 0.413587 4_3:+48439149 None:intergenic
AGGGGTCGTGGAGGTTTCTC+TGG 0.415439 4_3:-48438924 Msa0644530:CDS
AGAGAGTTCCCAAAATCAAC+AGG 0.415902 4_3:+48439591 None:intergenic
AAACTATCTCACCCCATTGT+TGG 0.420910 4_3:-48441332 Msa0644530:CDS
AAACCATACAGTGGCGATAC+TGG 0.421037 4_3:-48437386 Msa0644530:CDS
GTGTTCTTCTATAAGCTGTA+TGG 0.421606 4_3:+48437310 None:intergenic
TTTATCGATGATGTTGAAAA+GGG 0.425225 4_3:-48442102 Msa0644530:CDS
AACTATGTGGGAACAACCTC+AGG 0.425530 4_3:+48437077 None:intergenic
TTGTATGACCCTTGGTGGTC+GGG 0.425818 4_3:-48437827 Msa0644530:CDS
TTCTGAAATGGTTTGGTACC+AGG 0.426278 4_3:-48439636 Msa0644530:CDS
GGTGGATTTGGTGTTGGTGG+TGG 0.427309 4_3:-48439545 Msa0644530:CDS
CAAGGTGGATTTGGTGTTGG+TGG 0.428799 4_3:-48439548 Msa0644530:CDS
GAAGCAGGCCATGCTGTTGC+AGG 0.430567 4_3:-48437982 Msa0644530:CDS
CTTAAATCTATCGTAATTTG+TGG 0.441735 4_3:+48437181 None:intergenic
TGGTGATATTTGTAGTTGTC+GGG 0.442556 4_3:+48442444 None:intergenic
ATGTCTGCTCCAGCAAATCC+TGG 0.444210 4_3:+48438633 None:intergenic
GTGGTTTGGAGAAGAAGAAC+AGG 0.451185 4_3:-48438512 Msa0644530:CDS
GAACCAGATATGGAAAGAAA+TGG 0.451853 4_3:+48439068 None:intergenic
ATGGTGATATTTGTAGTTGT+CGG 0.451906 4_3:+48442443 None:intergenic
GGTGTTGGTGGTGGCTCCAC+TGG 0.453849 4_3:-48439536 Msa0644530:CDS
CTCCAGCAAATCCTGGAGTA+AGG 0.456693 4_3:+48438640 None:intergenic
ATTTGTTGGAGACAACAATA+TGG 0.457579 4_3:+48439860 None:intergenic
AAGTACTTTAAATCAATTGT+TGG 0.458092 4_3:-48438883 Msa0644530:CDS
ATTTCAGAAGAATATATAAC+AGG 0.458585 4_3:+48439650 None:intergenic
TTAAATCTATCGTAATTTGT+GGG 0.460225 4_3:+48437182 None:intergenic
GTTCTCACTAGGAACATATT+GGG 0.461038 4_3:+48437885 None:intergenic
ATTGATGAGATTGATGCAAT+TGG 0.464604 4_3:-48438954 Msa0644530:CDS
TACTGGTAACATCATTGATC+AGG 0.465960 4_3:-48437369 Msa0644530:CDS
TCTCACCCCATTGTTGGTGG+TGG 0.465963 4_3:-48441326 Msa0644530:CDS
CACTGGAGCACAAAATGACT+TGG 0.469816 4_3:-48437507 Msa0644530:CDS
ATAGTCCCACCACCAACAAT+GGG 0.471876 4_3:+48441320 None:intergenic
GAAGGAAGTGCCAAAGGGAG+AGG 0.474904 4_3:-48441805 Msa0644530:CDS
ACCAGATCCCTTTGCAGGAA+GGG 0.475185 4_3:+48439775 None:intergenic
GTGGGTTCTGCACTCTTGAA+GGG 0.475380 4_3:+48437200 None:intergenic
CTCATTGGAGCAATCTCCAC+TGG 0.475680 4_3:-48437524 Msa0644530:CDS
TTGCACGGTGAAGCAAGATT+GGG 0.476061 4_3:-48442156 Msa0644530:CDS
TGATGCAATTGGTCGGAAAA+GGG 0.476507 4_3:-48438943 Msa0644530:CDS
ATTACGATAGATTTAAGCTA+GGG 0.479014 4_3:-48437175 Msa0644530:CDS
TTGGTGGAAATGGATGGTTT+TGG 0.480220 4_3:-48438864 Msa0644530:CDS
TATTTGGGCATATGTCATCT+TGG 0.483350 4_3:+48437475 None:intergenic
TGAAGACCCACCACCCTCCT+TGG 0.483888 4_3:+48437109 None:intergenic
CTCGCGGCACAGCAGCACTT+GGG 0.487871 4_3:-48437912 Msa0644530:CDS
GCTGGAGTTGTTGTGCTAGC+AGG 0.490258 4_3:-48438834 Msa0644530:CDS
TTACCAGTATCGCCACTGTA+TGG 0.491525 4_3:+48437383 None:intergenic
CTCCTTGGCTTCATCGACGA+TGG 0.491547 4_3:+48437124 None:intergenic
GATGAAGCCAAGGAGGGTGG+TGG 0.491766 4_3:-48437116 Msa0644530:CDS
AGCCTTCATATTATTCTCAA+AGG 0.492433 4_3:-48438671 Msa0644530:CDS
TTCCTAGTGAGAACCTTCTC+AGG 0.496104 4_3:-48437876 Msa0644530:CDS
GCAGCTATCGATAGGATCAT+TGG 0.496191 4_3:-48438534 Msa0644530:CDS
GATCACGAGGACCAAGAGAA+AGG 0.498134 4_3:+48441287 None:intergenic
GCTGATATGGACAACTTGTA+CGG 0.500045 4_3:-48436999 Msa0644530:three_prime_UTR
GACAACGCCTTACTTAGGCC+TGG 0.501131 4_3:-48438789 Msa0644530:CDS
GGAAAAGAAGGAAGTGCCAA+AGG 0.503043 4_3:-48441811 Msa0644530:CDS
TACTTTAAATCAATTGTTGG+TGG 0.503402 4_3:-48438880 Msa0644530:CDS
GATATGACTTGTATGACCCT+TGG 0.505273 4_3:-48437835 Msa0644530:CDS
AGATTCGAACCAAGTCATCT+TGG 0.507271 4_3:+48437234 None:intergenic
CAAGGAACCCTTCCTGCAAA+GGG 0.510654 4_3:-48439782 Msa0644530:CDS
TGTCTAGGTAATAAGTAAGC+TGG 0.511471 4_3:-48438028 Msa0644530:intron
TGATCAGGAAGTGCGAGATT+GGG 0.511795 4_3:-48437354 Msa0644530:CDS
GAAAACATGCGATGAAGCCT+AGG 0.512524 4_3:+48441985 None:intergenic
AATCAATTGCTGCAAACCCT+AGG 0.513115 4_3:-48442002 Msa0644530:CDS
ACAATATGGTCTACTAATCC+TGG 0.514715 4_3:+48439874 None:intergenic
TCCAAAAGGTGCTCTTCTGG+TGG 0.519532 4_3:-48439150 Msa0644530:CDS
CTTGTATGACCCTTGGTGGT+CGG 0.520582 4_3:-48437828 Msa0644530:CDS
AAACCCATTATTACGAGCTA+TGG 0.521150 4_3:+48442047 None:intergenic
CCAAGGAACCCTTCCTGCAA+AGG 0.522628 4_3:-48439783 Msa0644530:CDS
AGGCTTGCAGCCCTTACTCC+AGG 0.523091 4_3:-48438651 Msa0644530:CDS
AATAGTCCCACCACCAACAA+TGG 0.523458 4_3:+48441319 None:intergenic
AAAACGCCCAGGCCTAAGTA+AGG 0.525242 4_3:+48438782 None:intergenic
CAAACATAAACTTAACTATG+TGG 0.526794 4_3:+48437064 None:intergenic
ACCGTTGCTTACCATGAAGC+AGG 0.531277 4_3:-48437997 Msa0644530:CDS
ATCACGAGGACCAAGAGAAA+GGG 0.533495 4_3:+48441288 None:intergenic
AATTACGATAGATTTAAGCT+AGG 0.533611 4_3:-48437176 Msa0644530:CDS
ATTGGTCGGAAAAGGGGTCG+TGG 0.536073 4_3:-48438936 Msa0644530:CDS
CACCAGATCCCTTTGCAGGA+AGG 0.536420 4_3:+48439774 None:intergenic
CTCGGCAGCCCGACCACCAA+GGG 0.536999 4_3:+48437819 None:intergenic
GGTCGTGGAATATTTAACAT+TGG 0.540391 4_3:-48439506 Msa0644530:CDS
CCTAAGAAATACGAAGAGCT+TGG 0.541178 4_3:-48439182 Msa0644530:CDS
GAAACTTGTTTCACGAAGCA+AGG 0.542077 4_3:-48439001 Msa0644530:CDS
CGTATTTCTTAGGATTCTTG+AGG 0.544887 4_3:+48439192 None:intergenic
TCAAAGTCAAACACAGAGGA+TGG 0.545037 4_3:-48441391 Msa0644530:CDS
GTGCAAGGTGGATTTGGTGT+TGG 0.545995 4_3:-48439551 Msa0644530:CDS
TGGTCCTCGTGATCAGCAGC+AGG 0.548339 4_3:-48441278 Msa0644530:intron
AGGTAATAAGTAAGCTGGAA+AGG 0.548736 4_3:-48438023 Msa0644530:CDS
AGCCTTTGAGAATAATATGA+AGG 0.549153 4_3:+48438669 None:intergenic
CTCACCCCATTGTTGGTGGT+GGG 0.551716 4_3:-48441325 Msa0644530:CDS
CTTGGTGCCAAAATTCCAAA+AGG 0.552017 4_3:-48439164 Msa0644530:CDS
TATTAGACAACGCCTTACTT+AGG 0.552358 4_3:-48438794 Msa0644530:CDS
AAACATAAACTTAACTATGT+GGG 0.552385 4_3:+48437065 None:intergenic
GCGCAAATCTCATTAACTCC+TGG 0.554538 4_3:+48439618 None:intergenic
CTATCTCACCCCATTGTTGG+TGG 0.556416 4_3:-48441329 Msa0644530:CDS
TAAGCTAGGGTTTCAAGATG+AGG 0.556661 4_3:-48437162 Msa0644530:CDS
TTGAAGAAACAATGGTAACT+AGG 0.558174 4_3:+48442322 None:intergenic
CAGGCCATGCTGTTGCAGGT+TGG 0.560076 4_3:-48437978 Msa0644530:CDS
GCTGCTCCTTTGTCCTGAGA+AGG 0.560952 4_3:+48437863 None:intergenic
ACAACGCCTTACTTAGGCCT+GGG 0.561103 4_3:-48438788 Msa0644530:CDS
GAACTCTCTGGTTTATGGGA+AGG 0.561814 4_3:-48439577 Msa0644530:CDS
TCCACTGGTAAGAATGGTCG+TGG 0.570992 4_3:-48439521 Msa0644530:CDS
TCATCAATAAATACTATACT+GGG 0.572453 4_3:+48438969 None:intergenic
AGTACTTCACCAAGATGACT+TGG 0.572458 4_3:-48437243 Msa0644530:CDS
GAGGAAGCGCAAGAAGCACT+AGG 0.572888 4_3:-48439695 Msa0644530:CDS
GAAAAGAAGGAAGTGCCAAA+GGG 0.575045 4_3:-48441810 Msa0644530:CDS
GCTCGGCAGCCCGACCACCA+AGG 0.576079 4_3:+48437818 None:intergenic
TCCACGACCATTCTTACCAG+TGG 0.580385 4_3:+48439520 None:intergenic
TCCAGCAAATCCTGGAGTAA+GGG 0.580747 4_3:+48438641 None:intergenic
CCAAAAGGTGCTCTTCTGGT+GGG 0.582841 4_3:-48439149 Msa0644530:CDS
ATTTCGAGGCAGCTATCGAT+AGG 0.584687 4_3:-48438542 Msa0644530:CDS
AACCATCGTCGATGAAGCCA+AGG 0.587489 4_3:-48437126 Msa0644530:CDS
GTTCCCAAAATCAACAGGGT+TGG 0.588353 4_3:+48439596 None:intergenic
GTCTTCACCTCTAGAACCTG+AGG 0.592909 4_3:-48437093 Msa0644530:CDS
ACAATAGTTACTTTCAACAA+TGG 0.594322 4_3:+48437937 None:intergenic
AGTCACAATGGATCATTTCG+AGG 0.595853 4_3:-48438556 Msa0644530:CDS
ATCATGCTTTGAAGAAACAA+TGG 0.598166 4_3:+48442314 None:intergenic
GGTGGCTCCACTGGTAAGAA+TGG 0.599960 4_3:-48439527 Msa0644530:CDS
ATGACTTGTATGACCCTTGG+TGG 0.602845 4_3:-48437832 Msa0644530:CDS
TGGTTTGGAGAAGAAGAACA+GGG 0.606026 4_3:-48438511 Msa0644530:intron
AAAACATGCGATGAAGCCTA+GGG 0.607666 4_3:+48441986 None:intergenic
GCCTGCTTCATGGTAAGCAA+CGG 0.609319 4_3:+48437996 None:intergenic
CTTCCTGCAAAGGGATCTGG+TGG 0.609552 4_3:-48439773 Msa0644530:CDS
GATGCAATTGGTCGGAAAAG+GGG 0.610099 4_3:-48438942 Msa0644530:CDS
AAATGATGAAACAACCTGCT+CGG 0.612044 4_3:+48437801 None:intergenic
GTCCTGAGAAGGTTCTCACT+AGG 0.616189 4_3:+48437874 None:intergenic
GCTATCGATAGGATCATTGG+TGG 0.616670 4_3:-48438531 Msa0644530:CDS
ATGAAGCCAAGGAGGGTGGT+GGG 0.619072 4_3:-48437115 Msa0644530:CDS
CAAGCAGACAGCGAAGTCCA+AGG 0.624939 4_3:-48439800 Msa0644530:CDS
CAATTGTTGGTGGAAATGGA+TGG 0.625755 4_3:-48438870 Msa0644530:CDS
CATCGTCGATGAAGCCAAGG+AGG 0.628464 4_3:-48437123 Msa0644530:CDS
GAGAATAATATGAAGGCTCG+TGG 0.628614 4_3:+48438676 None:intergenic
GTCGATGAAGCCAAGGAGGG+TGG 0.631690 4_3:-48437119 Msa0644530:CDS
ATGAGATTGATGCAATTGGT+CGG 0.631846 4_3:-48438950 Msa0644530:CDS
CTTACCTGCTGCTGATCACG+AGG 0.632040 4_3:+48441274 None:intergenic
GGAACAACCTCAGGTTCTAG+AGG 0.634295 4_3:+48437086 None:intergenic
AAGCTGCTCTGATTGCTGCA+AGG 0.638573 4_3:-48438593 Msa0644530:CDS
TGATGAATCACAAGTCACAA+TGG 0.642219 4_3:-48438568 Msa0644530:CDS
GGTCGGAAAAGGGGTCGTGG+AGG 0.642405 4_3:-48438933 Msa0644530:CDS
ATCGTCGATGAAGCCAAGGA+GGG 0.650482 4_3:-48437122 Msa0644530:CDS
TAGCACAACAACTCCAGCAG+TGG 0.652358 4_3:+48438839 None:intergenic
AGAACCAACCTGCAACAGCA+TGG 0.654487 4_3:+48437974 None:intergenic
GTCATGTAGAATTTGTTGCA+CGG 0.655486 4_3:-48442171 Msa0644530:intron
ATGGGAAGGAAAGTGCAAGG+TGG 0.659337 4_3:-48439563 Msa0644530:CDS
TGAGAACCTTCTCAGGACAA+AGG 0.663177 4_3:-48437869 Msa0644530:CDS
AAGTCAAACACAGAGGATGG+AGG 0.663945 4_3:-48441388 Msa0644530:CDS
CCAAGTGCTGCTGTGCCGCG+AGG 0.668668 4_3:+48437913 None:intergenic
TTTAGCAAAAGCAACTGCAG+GGG 0.671935 4_3:-48439102 Msa0644530:CDS
CAGTTGCCAAAATATATGTG+AGG 0.694454 4_3:-48439837 Msa0644530:CDS
AAAGTAACTATTGTTCCTCG+CGG 0.694758 4_3:-48437928 Msa0644530:CDS
ACAGCTTATAGAAGAACACA+AGG 0.695122 4_3:-48437306 Msa0644530:CDS
TTTATGGGAAGGAAAGTGCA+AGG 0.696455 4_3:-48439566 Msa0644530:CDS
AGATGTTGCTGGCTGTGACG+AGG 0.714294 4_3:-48439246 Msa0644530:CDS
GAGAGTTCCCAAAATCAACA+GGG 0.726423 4_3:+48439592 None:intergenic
TAGTCCCACCACCAACAATG+GGG 0.742812 4_3:+48441321 None:intergenic
TGAGTCAAAGTCAAACACAG+AGG 0.760960 4_3:-48441395 Msa0644530:CDS
GCGTTTGGGAAACCATACAG+TGG 0.770537 4_3:-48437395 Msa0644530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTATTAATGATTTTTAAT+TGG - chr4_3:48437146-48437165 Msa0644530:CDS 10.0%
!!! TTATTTTAATTTTCTTATGT+GGG - chr4_3:48438121-48438140 Msa0644530:intron 10.0%
!!! TATTGATTACATATTTAAAT+TGG + chr4_3:48439593-48439612 None:intergenic 10.0%
!! TTTAAATATGTAATCAATAT+TGG - chr4_3:48439594-48439613 Msa0644530:CDS 10.0%
!! TTTAAAAATAAAAAACAAAC+AGG + chr4_3:48440869-48440888 None:intergenic 10.0%
!!! TTAAAATATAAAATGTTTTC+TGG - chr4_3:48440900-48440919 Msa0644530:intron 10.0%
!!! TAAAATATAAAATGTTTTCT+GGG - chr4_3:48440901-48440920 Msa0644530:intron 10.0%
!!! GTTATTTTAATTTTCTTATG+TGG - chr4_3:48438120-48438139 Msa0644530:intron 15.0%
!!! TATTTTAATTTTCTTATGTG+GGG - chr4_3:48438122-48438141 Msa0644530:intron 15.0%
!! ATAAGCTAATTTATTCAAAA+TGG + chr4_3:48438989-48439008 None:intergenic 15.0%
!!! TGAAAATCATGTTTTTTTAT+GGG + chr4_3:48439044-48439063 None:intergenic 15.0%
!!! TTGAAAATCATGTTTTTTTA+TGG + chr4_3:48439045-48439064 None:intergenic 15.0%
!! TTACAAAAAAAATAATTCTG+TGG + chr4_3:48441102-48441121 None:intergenic 15.0%
!! TGAAATAATTCATTATATCT+TGG - chr4_3:48441619-48441638 Msa0644530:intron 15.0%
!! AATTAACGAATCAAATTGAA+GGG + chr4_3:48437111-48437130 None:intergenic 20.0%
!!! TGTCTTAATTTTGATGAAAT+TGG - chr4_3:48437429-48437448 Msa0644530:CDS 20.0%
!!! GTCTTAATTTTGATGAAATT+GGG - chr4_3:48437430-48437449 Msa0644530:CDS 20.0%
!! ATAACTTCAAATATATTGCA+AGG - chr4_3:48438090-48438109 Msa0644530:intron 20.0%
!! AAGAAAATTAAAATAACAGC+CGG + chr4_3:48438117-48438136 None:intergenic 20.0%
!!! ATTTTAATTTTCTTATGTGG+GGG - chr4_3:48438123-48438142 Msa0644530:intron 20.0%
!! TTTGTTGATATCTTAACATA+GGG + chr4_3:48438904-48438923 None:intergenic 20.0%
!!! TTTTGTTGATATCTTAACAT+AGG + chr4_3:48438905-48438924 None:intergenic 20.0%
!! TTATTATCATATTGCTAATG+TGG - chr4_3:48439385-48439404 Msa0644530:intron 20.0%
!! ATTTCAGAAGAATATATAAC+AGG + chr4_3:48439693-48439712 None:intergenic 20.0%
!!! TGTTATATATTCTTCTGAAA+TGG - chr4_3:48439692-48439711 Msa0644530:CDS 20.0%
!! TTATTTGAATTCATTTGTTC+AGG - chr4_3:48440061-48440080 Msa0644530:intron 20.0%
!! TCATCAATAAATACTATACT+GGG + chr4_3:48440374-48440393 None:intergenic 20.0%
!! AAGTACTTTAAATCAATTGT+TGG - chr4_3:48440457-48440476 Msa0644530:intron 20.0%
!!! TCAAATAAATCTGAAATATC+TGG + chr4_3:48440628-48440647 None:intergenic 20.0%
!! ACAATTATCTGAAGATTATT+TGG - chr4_3:48441230-48441249 Msa0644530:intron 20.0%
!! TATTATCAGTAGTTGAAAAA+AGG + chr4_3:48441268-48441287 None:intergenic 20.0%
!! ATGTGAAACAAAATAAGTAA+TGG + chr4_3:48441646-48441665 None:intergenic 20.0%
!!! TTAAATCTATCGTAATTTGT+GGG + chr4_3:48442161-48442180 None:intergenic 20.0%
!! AAACATAAACTTAACTATGT+GGG + chr4_3:48442278-48442297 None:intergenic 20.0%
! AAAAACGAGATACGATAAAA+TGG + chr4_3:48436919-48436938 None:intergenic 25.0%
!!! AGCATGATTTTTTCAAGAAT+TGG - chr4_3:48437041-48437060 Msa0644530:three_prime_UTR 25.0%
!!! GCATGATTTTTTCAAGAATT+GGG - chr4_3:48437042-48437061 Msa0644530:three_prime_UTR 25.0%
! GAATTAACGAATCAAATTGA+AGG + chr4_3:48437112-48437131 None:intergenic 25.0%
!! TTTTATCGATGATGTTGAAA+AGG - chr4_3:48437237-48437256 Msa0644530:CDS 25.0%
! TTTATCGATGATGTTGAAAA+GGG - chr4_3:48437238-48437257 Msa0644530:CDS 25.0%
!! TAACTTACTCTTTTTCTTTG+GGG + chr4_3:48437389-48437408 None:intergenic 25.0%
!! CTAACTTACTCTTTTTCTTT+GGG + chr4_3:48437390-48437409 None:intergenic 25.0%
! CAAAGAAAAAGAGTAAGTTA+GGG - chr4_3:48437389-48437408 Msa0644530:CDS 25.0%
!! TTTTGATGAAATTGGGAAAA+TGG - chr4_3:48437437-48437456 Msa0644530:CDS 25.0%
! TTTGATGAAATTGGGAAAAT+GGG - chr4_3:48437438-48437457 Msa0644530:CDS 25.0%
!!! TTATGAAAAGTTTTATCCCA+AGG - chr4_3:48437508-48437527 Msa0644530:CDS 25.0%
! AATTACTCTCAATTAGTGTT+GGG - chr4_3:48437701-48437720 Msa0644530:intron 25.0%
!! TTCTCTCAATCATATGATTT+TGG - chr4_3:48437794-48437813 Msa0644530:intron 25.0%
!!! TTTTGAGGTATTTATATGTG+TGG - chr4_3:48437832-48437851 Msa0644530:CDS 25.0%
!! TTTGAGGTATTTATATGTGT+GGG - chr4_3:48437833-48437852 Msa0644530:CDS 25.0%
!!! TTTTAATTTTCTTATGTGGG+GGG - chr4_3:48438124-48438143 Msa0644530:intron 25.0%
! GACTTGTAAACTTATGTTTA+AGG + chr4_3:48438242-48438261 None:intergenic 25.0%
! TAAACATAAGTTTACAAGTC+AGG - chr4_3:48438242-48438261 Msa0644530:intron 25.0%
! AAACATAAGTTTACAAGTCA+GGG - chr4_3:48438243-48438262 Msa0644530:intron 25.0%
! CTGATACTATCTTAGAATTT+GGG + chr4_3:48438316-48438335 None:intergenic 25.0%
! TCTGATACTATCTTAGAATT+TGG + chr4_3:48438317-48438336 None:intergenic 25.0%
!! ATCGATGTTCAATTTTCAAT+CGG + chr4_3:48438588-48438607 None:intergenic 25.0%
! CTAATAGTATTCTTGTGTAA+TGG + chr4_3:48438656-48438675 None:intergenic 25.0%
!!! AAAAACATGATTTTCAAGTC+TGG - chr4_3:48439048-48439067 Msa0644530:intron 25.0%
! AAAACAGTTCAAGATAATGT+TGG + chr4_3:48439108-48439127 None:intergenic 25.0%
! AATATGCAGATACATATCTT+AGG + chr4_3:48439188-48439207 None:intergenic 25.0%
! AAGATATGTATCTGCATATT+TGG - chr4_3:48439188-48439207 Msa0644530:CDS 25.0%
! AGATATGTATCTGCATATTT+GGG - chr4_3:48439189-48439208 Msa0644530:CDS 25.0%
!!! ATAACAATTTTGATACGTCT+AGG - chr4_3:48439239-48439258 Msa0644530:CDS 25.0%
!!! AAAGCTTATTTTTAAACTCC+TGG + chr4_3:48439441-48439460 None:intergenic 25.0%
!! GGAGTTTAAAAATAAGCTTT+TGG - chr4_3:48439441-48439460 Msa0644530:intron 25.0%
!!! TATATTCTTCTGAAATGGTT+TGG - chr4_3:48439697-48439716 Msa0644530:CDS 25.0%
! AGACAAAAATACCAAAAACA+AGG - chr4_3:48439878-48439897 Msa0644530:CDS 25.0%
! AAAAATACCAAAAACAAGGT+TGG - chr4_3:48439882-48439901 Msa0644530:CDS 25.0%
! GTGATTTATTCTTCATGAAT+TGG - chr4_3:48439904-48439923 Msa0644530:CDS 25.0%
!!! GTTTATTTTAAAGATGTTGC+TGG - chr4_3:48440083-48440102 Msa0644530:intron 25.0%
! CTCATCAATAAATACTATAC+TGG + chr4_3:48440375-48440394 None:intergenic 25.0%
! TACTTTAAATCAATTGTTGG+TGG - chr4_3:48440460-48440479 Msa0644530:intron 25.0%
!! AAAAACAAACAGGCTTTTAA+AGG + chr4_3:48440859-48440878 None:intergenic 25.0%
!! TATAAAATGTTTTCTGGGTT+TGG - chr4_3:48440906-48440925 Msa0644530:intron 25.0%
!! TAATTTAAGACATCATGATG+AGG - chr4_3:48441194-48441213 Msa0644530:intron 25.0%
! TATCTGAAGATTATTTGGAT+TGG - chr4_3:48441235-48441254 Msa0644530:intron 25.0%
!! ACAATAGTTACTTTCAACAA+TGG + chr4_3:48441406-48441425 None:intergenic 25.0%
! AGCAATGAATAAAAGAAAAG+AGG + chr4_3:48441582-48441601 None:intergenic 25.0%
!!! TGTATATCAGTGTTTTTTTG+TGG + chr4_3:48441715-48441734 None:intergenic 25.0%
! ATCTCATGACTTACAATATT+GGG + chr4_3:48441761-48441780 None:intergenic 25.0%
! CTTAAATCTATCGTAATTTG+TGG + chr4_3:48442162-48442181 None:intergenic 25.0%
! AATTACGATAGATTTAAGCT+AGG - chr4_3:48442164-48442183 Msa0644530:CDS 25.0%
! ATTACGATAGATTTAAGCTA+GGG - chr4_3:48442165-48442184 Msa0644530:CDS 25.0%
! CAAACATAAACTTAACTATG+TGG + chr4_3:48442279-48442298 None:intergenic 25.0%
ATGGTGATATTTGTAGTTGT+CGG + chr4_3:48436900-48436919 None:intergenic 30.0%
TTGAAGAAACAATGGTAACT+AGG + chr4_3:48437021-48437040 None:intergenic 30.0%
!! ATCATGCTTTGAAGAAACAA+TGG + chr4_3:48437029-48437048 None:intergenic 30.0%
ATGATGTTGAAAAGGGATTA+GGG - chr4_3:48437245-48437264 Msa0644530:CDS 30.0%
! AAAAGGGATTAGGGTTTTTA+AGG - chr4_3:48437254-48437273 Msa0644530:CDS 30.0%
! AAAGGGATTAGGGTTTTTAA+GGG - chr4_3:48437255-48437274 Msa0644530:CDS 30.0%
! CCTAACTTACTCTTTTTCTT+TGG + chr4_3:48437391-48437410 None:intergenic 30.0%
CCAAAGAAAAAGAGTAAGTT+AGG - chr4_3:48437388-48437407 Msa0644530:CDS 30.0%
GAGAAAAAATCTGAGTCTAA+AGG - chr4_3:48437557-48437576 Msa0644530:intron 30.0%
! TCTTGTGTTATTGTTAGTTG+TGG - chr4_3:48437615-48437634 Msa0644530:intron 30.0%
GAATTACTCTCAATTAGTGT+TGG - chr4_3:48437700-48437719 Msa0644530:intron 30.0%
TTGAGAGAAAACATGTTGTT+GGG + chr4_3:48437783-48437802 None:intergenic 30.0%
ATTGAGAGAAAACATGTTGT+TGG + chr4_3:48437784-48437803 None:intergenic 30.0%
!!! TCTGTACTGGTTTAATTTTG+AGG - chr4_3:48437817-48437836 Msa0644530:CDS 30.0%
! TTGAGGTATTTATATGTGTG+GGG - chr4_3:48437834-48437853 Msa0644530:CDS 30.0%
TAAGTGTTAAAAATTGCTGC+TGG + chr4_3:48437909-48437928 None:intergenic 30.0%
TTCAAATATATTGCAAGGTC+CGG - chr4_3:48438095-48438114 Msa0644530:intron 30.0%
GATCTATAAATATCCGTGTT+CGG - chr4_3:48438176-48438195 Msa0644530:intron 30.0%
! ACTATCTTAGAATTTGGGTT+GGG + chr4_3:48438311-48438330 None:intergenic 30.0%
TACTATCTTAGAATTTGGGT+TGG + chr4_3:48438312-48438331 None:intergenic 30.0%
AACTTCATCTCATTCAATGT+GGG + chr4_3:48438452-48438471 None:intergenic 30.0%
AAACTTCATCTCATTCAATG+TGG + chr4_3:48438453-48438472 None:intergenic 30.0%
TTAACTCATCCTTACAAAAC+TGG + chr4_3:48438517-48438536 None:intergenic 30.0%
!! AACATCTAGCCTTAGAATAT+GGG + chr4_3:48438546-48438565 None:intergenic 30.0%
!! TAACATCTAGCCTTAGAATA+TGG + chr4_3:48438547-48438566 None:intergenic 30.0%
! ATTGCATATTCGAGCTTTAT+AGG + chr4_3:48438735-48438754 None:intergenic 30.0%
TAAAGCTCGAATATGCAATA+CGG - chr4_3:48438736-48438755 Msa0644530:intron 30.0%
TCAAAATGGTTGTGAATTGT+TGG + chr4_3:48438975-48438994 None:intergenic 30.0%
!!! TCATGTTTTTTTATGGGTGA+TGG + chr4_3:48439038-48439057 None:intergenic 30.0%
TAATGTTGGACTTCTTGAAT+TGG + chr4_3:48439094-48439113 None:intergenic 30.0%
TTAAAATGTGAGACAGTTGT+AGG + chr4_3:48439151-48439170 None:intergenic 30.0%
CATATCTTAGGAAAGATGAA+GGG + chr4_3:48439176-48439195 None:intergenic 30.0%
ACATATCTTAGGAAAGATGA+AGG + chr4_3:48439177-48439196 None:intergenic 30.0%
!!! AAAAATAAGCTTTTGGAACC+AGG - chr4_3:48439448-48439467 Msa0644530:intron 30.0%
! ATTTGTTGGAGACAACAATA+TGG + chr4_3:48439483-48439502 None:intergenic 30.0%
!!! TATTTTGGCAACTGATTTGT+TGG + chr4_3:48439497-48439516 None:intergenic 30.0%
! AGAGTTCCTCACATATATTT+TGG + chr4_3:48439512-48439531 None:intergenic 30.0%
!!! TAAATCACCAACCTTGTTTT+TGG + chr4_3:48439892-48439911 None:intergenic 30.0%
GATTTCATGGAAATGTTTGT+CGG - chr4_3:48440296-48440315 Msa0644530:intron 30.0%
ATTGATGAGATTGATGCAAT+TGG - chr4_3:48440386-48440405 Msa0644530:intron 30.0%
! AAATCAATTGTTGGTGGAAA+TGG - chr4_3:48440466-48440485 Msa0644530:intron 30.0%
ATTGATGTACCTGACATTAA+AGG - chr4_3:48440596-48440615 Msa0644530:intron 30.0%
AGCCTTCATATTATTCTCAA+AGG - chr4_3:48440669-48440688 Msa0644530:intron 30.0%
! AGCCTTTGAGAATAATATGA+AGG + chr4_3:48440674-48440693 None:intergenic 30.0%
! GTTAAGCTGTTTAAAACAGT+CGG - chr4_3:48440932-48440951 Msa0644530:intron 30.0%
AATACTCATGTTTCTTGTCT+AGG - chr4_3:48441297-48441316 Msa0644530:CDS 30.0%
AAGAGGTGAGTAAACAAAAT+TGG + chr4_3:48441565-48441584 None:intergenic 30.0%
CATCTCATGACTTACAATAT+TGG + chr4_3:48441762-48441781 None:intergenic 30.0%
!! GTTTAGTCATTTTGCTGATA+TGG - chr4_3:48442328-48442347 Msa0644530:five_prime_UTR 30.0%
! GAAATAGACTTTGATTAGCT+TGG + chr4_3:48442422-48442441 None:intergenic 30.0%
TGGTGATATTTGTAGTTGTC+GGG + chr4_3:48436899-48436918 None:intergenic 35.0%
!! GTCATGTAGAATTTGTTGCA+CGG - chr4_3:48437169-48437188 Msa0644530:CDS 35.0%
GATGATGTTGAAAAGGGATT+AGG - chr4_3:48437244-48437263 Msa0644530:CDS 35.0%
!! AAGGGATTAGGGTTTTTAAG+GGG - chr4_3:48437256-48437275 Msa0644530:CDS 35.0%
AAACCCATTATTACGAGCTA+TGG + chr4_3:48437296-48437315 None:intergenic 35.0%
! GTTTTATCCCAAGGAAAAGA+AGG - chr4_3:48437517-48437536 Msa0644530:CDS 35.0%
!! CATATGATTTTGGTCTGTAC+TGG - chr4_3:48437804-48437823 Msa0644530:intron 35.0%
! TGAGGTATTTATATGTGTGG+GGG - chr4_3:48437835-48437854 Msa0644530:CDS 35.0%
CAGTTTGTCTTGCGATAAAT+GGG - chr4_3:48437880-48437899 Msa0644530:CDS 35.0%
AGTTTGTCTTGCGATAAATG+GGG - chr4_3:48437881-48437900 Msa0644530:CDS 35.0%
TTTCTTTCATCCCTTTCTCT+TGG - chr4_3:48438042-48438061 Msa0644530:intron 35.0%
TTAACACACTCACACCTTTA+CGG + chr4_3:48438424-48438443 None:intergenic 35.0%
! TAAAGGTGTGAGTGTGTTAA+GGG - chr4_3:48438424-48438443 Msa0644530:intron 35.0%
ACTTCATCTCATTCAATGTG+GGG + chr4_3:48438451-48438470 None:intergenic 35.0%
TGAACACAAGTTTACAAGTG+AGG - chr4_3:48438472-48438491 Msa0644530:intron 35.0%
GAACACAAGTTTACAAGTGA+GGG - chr4_3:48438473-48438492 Msa0644530:intron 35.0%
TAAACCCAACCCATATTCTA+AGG - chr4_3:48438534-48438553 Msa0644530:CDS 35.0%
!! TTTCCATGTTTTTGCTTGCT+TGG - chr4_3:48438696-48438715 Msa0644530:CDS 35.0%
ATACCAAGCAAGCAAAAACA+TGG + chr4_3:48438702-48438721 None:intergenic 35.0%
ACAATATGGTCTACTAATCC+TGG + chr4_3:48439469-48439488 None:intergenic 35.0%
CAGTTGCCAAAATATATGTG+AGG - chr4_3:48439503-48439522 Msa0644530:CDS 35.0%
GGTCGTGGAATATTTAACAT+TGG - chr4_3:48439834-48439853 Msa0644530:CDS 35.0%
CCTAAAGAAAAAGTGGACAT+GGG + chr4_3:48439987-48440006 None:intergenic 35.0%
!!! CCATGTCCACTTTTTCTTTA+GGG - chr4_3:48439985-48440004 Msa0644530:intron 35.0%
ACAACTCCCTAAAGAAAAAG+TGG + chr4_3:48439994-48440013 None:intergenic 35.0%
!! ACTTTTTCTTTAGGGAGTTG+TGG - chr4_3:48439993-48440012 Msa0644530:intron 35.0%
CGTATTTCTTAGGATTCTTG+AGG + chr4_3:48440151-48440170 None:intergenic 35.0%
!!! AAGAGCACCTTTTGGAATTT+TGG + chr4_3:48440186-48440205 None:intergenic 35.0%
!!! TGCAGTTGCTTTTGCTAAAA+GGG + chr4_3:48440237-48440256 None:intergenic 35.0%
! TTTTAGCAAAAGCAACTGCA+GGG - chr4_3:48440237-48440256 Msa0644530:intron 35.0%
GAACCAGATATGGAAAGAAA+TGG + chr4_3:48440275-48440294 None:intergenic 35.0%
CATGAAATCAGAACCAGATA+TGG + chr4_3:48440285-48440304 None:intergenic 35.0%
!! CATATCTGGTTCTGATTTCA+TGG - chr4_3:48440283-48440302 Msa0644530:intron 35.0%
ATGAGATTGATGCAATTGGT+CGG - chr4_3:48440390-48440409 Msa0644530:intron 35.0%
TATTAGACAACGCCTTACTT+AGG - chr4_3:48440546-48440565 Msa0644530:intron 35.0%
GTACATCAATTGATATCGTG+CGG + chr4_3:48440586-48440605 None:intergenic 35.0%
TGATGAATCACAAGTCACAA+TGG - chr4_3:48440772-48440791 Msa0644530:intron 35.0%
TGTCTAGGTAATAAGTAAGC+TGG - chr4_3:48441312-48441331 Msa0644530:CDS 35.0%
AGGTAATAAGTAAGCTGGAA+AGG - chr4_3:48441317-48441336 Msa0644530:CDS 35.0%
AAAGTAACTATTGTTCCTCG+CGG - chr4_3:48441412-48441431 Msa0644530:intron 35.0%
GTTCTCACTAGGAACATATT+GGG + chr4_3:48441458-48441477 None:intergenic 35.0%
AAATGATGAAACAACCTGCT+CGG + chr4_3:48441542-48441561 None:intergenic 35.0%
!! TACAATATTGGGAAGCATCA+AGG + chr4_3:48441750-48441769 None:intergenic 35.0%
AAGTCATGAGATGAGTATGA+TGG - chr4_3:48441769-48441788 Msa0644530:intron 35.0%
TATTTGGGCATATGTCATCT+TGG + chr4_3:48441868-48441887 None:intergenic 35.0%
TACTGGTAACATCATTGATC+AGG - chr4_3:48441971-48441990 Msa0644530:CDS 35.0%
GTGTTCTTCTATAAGCTGTA+TGG + chr4_3:48442033-48442052 None:intergenic 35.0%
ACAGCTTATAGAAGAACACA+AGG - chr4_3:48442034-48442053 Msa0644530:CDS 35.0%
TCTGCCATAGCTCGTAATAA+TGG - chr4_3:48437289-48437308 Msa0644530:CDS 40.0%
CTGCCATAGCTCGTAATAAT+GGG - chr4_3:48437290-48437309 Msa0644530:CDS 40.0%
AATCAATTGCTGCAAACCCT+AGG - chr4_3:48437338-48437357 Msa0644530:CDS 40.0%
AAAACATGCGATGAAGCCTA+GGG + chr4_3:48437357-48437376 None:intergenic 40.0%
!! GAAAAGAAGGAAGTGCCAAA+GGG - chr4_3:48437530-48437549 Msa0644530:CDS 40.0%
!!! GATTTTTTCTCCTCTCCCTT+TGG + chr4_3:48437548-48437567 None:intergenic 40.0%
CCATTTATCGCAAGACAAAC+TGG + chr4_3:48437882-48437901 None:intergenic 40.0%
CCAGTTTGTCTTGCGATAAA+TGG - chr4_3:48437879-48437898 Msa0644530:CDS 40.0%
TGAGTCAAAGTCAAACACAG+AGG - chr4_3:48437945-48437964 Msa0644530:CDS 40.0%
TCAAAGTCAAACACAGAGGA+TGG - chr4_3:48437949-48437968 Msa0644530:CDS 40.0%
AAACTATCTCACCCCATTGT+TGG - chr4_3:48438008-48438027 Msa0644530:CDS 40.0%
! TAATTTTCTTATGTGGGGGG+AGG - chr4_3:48438127-48438146 Msa0644530:intron 40.0%
! AATTTTCTTATGTGGGGGGA+GGG - chr4_3:48438128-48438147 Msa0644530:intron 40.0%
AACTCAAACAATGCCGAACA+CGG + chr4_3:48438192-48438211 None:intergenic 40.0%
TTGAGTTAAGAGTCCTACAC+TGG - chr4_3:48438205-48438224 Msa0644530:intron 40.0%
! GTCCTACACTGGATTAGATA+AGG - chr4_3:48438216-48438235 Msa0644530:intron 40.0%
! GTAAAGGTGTGAGTGTGTTA+AGG - chr4_3:48438423-48438442 Msa0644530:intron 40.0%
! AAAGGTGTGAGTGTGTTAAG+GGG - chr4_3:48438425-48438444 Msa0644530:intron 40.0%
CCTTACAAAACTGGTCAGTA+AGG + chr4_3:48438508-48438527 None:intergenic 40.0%
!! CCTTACTGACCAGTTTTGTA+AGG - chr4_3:48438505-48438524 Msa0644530:intron 40.0%
!! CTAGCCTTAGAATATGGGTT+GGG + chr4_3:48438541-48438560 None:intergenic 40.0%
!! TCTAGCCTTAGAATATGGGT+TGG + chr4_3:48438542-48438561 None:intergenic 40.0%
AATGGTTGTGAATTGTTGGC+TGG + chr4_3:48438971-48438990 None:intergenic 40.0%
! TTATGGGTGATGGTAATGTG+AGG + chr4_3:48439028-48439047 None:intergenic 40.0%
CAATACTTCGAGGTTACACA+TGG + chr4_3:48439273-48439292 None:intergenic 40.0%
CATGTGTAACCTCGAAGTAT+TGG - chr4_3:48439271-48439290 Msa0644530:intron 40.0%
TATCGGATACCAATACTTCG+AGG + chr4_3:48439283-48439302 None:intergenic 40.0%
CAATTCAAAGGCTCGCATAT+CGG + chr4_3:48439300-48439319 None:intergenic 40.0%
AGACGTGTGGTTCAATTCAA+AGG + chr4_3:48439312-48439331 None:intergenic 40.0%
GATGACTCTACATCTTTGTC+TGG - chr4_3:48439343-48439362 Msa0644530:intron 40.0%
!! TTCTCTGCAGATTAGTTTCC+AGG - chr4_3:48439420-48439439 Msa0644530:intron 40.0%
TTCGCTGTCTGCTTGATTAA+GGG + chr4_3:48439535-48439554 None:intergenic 40.0%
!!! TGGAAGTGTTGAGTCTTTTG+AGG - chr4_3:48439614-48439633 Msa0644530:CDS 40.0%
!! GTCTTTTGAGGAGAAGTTAG+AGG - chr4_3:48439626-48439645 Msa0644530:CDS 40.0%
!! TTCTGAAATGGTTTGGTACC+AGG - chr4_3:48439704-48439723 Msa0644530:CDS 40.0%
GAGAGTTCCCAAAATCAACA+GGG + chr4_3:48439751-48439770 None:intergenic 40.0%
AGAGAGTTCCCAAAATCAAC+AGG + chr4_3:48439752-48439771 None:intergenic 40.0%
!!! TGTTGATTTTGGGAACTCTC+TGG - chr4_3:48439751-48439770 Msa0644530:intron 40.0%
! TTTGGGAACTCTCTGGTTTA+TGG - chr4_3:48439758-48439777 Msa0644530:intron 40.0%
! TTGGGAACTCTCTGGTTTAT+GGG - chr4_3:48439759-48439778 Msa0644530:intron 40.0%
! TTTATGGGAAGGAAAGTGCA+AGG - chr4_3:48439774-48439793 Msa0644530:CDS 40.0%
GGAAAGGCAATGATCAACTA+GGG + chr4_3:48439966-48439985 None:intergenic 40.0%
AGAAAAAGTGGACATGGGAA+AGG + chr4_3:48439982-48440001 None:intergenic 40.0%
!!! CCCATGTCCACTTTTTCTTT+AGG - chr4_3:48439984-48440003 Msa0644530:intron 40.0%
CCCTAAAGAAAAAGTGGACA+TGG + chr4_3:48439988-48440007 None:intergenic 40.0%
CGAGGCAAAGCAAGAAATTA+TGG - chr4_3:48440112-48440131 Msa0644530:intron 40.0%
CCAAGCTCTTCGTATTTCTT+AGG + chr4_3:48440161-48440180 None:intergenic 40.0%
CCTAAGAAATACGAAGAGCT+TGG - chr4_3:48440158-48440177 Msa0644530:intron 40.0%
!! CTTGGTGCCAAAATTCCAAA+AGG - chr4_3:48440176-48440195 Msa0644530:intron 40.0%
!! AATTCCAAAAGGTGCTCTTC+TGG - chr4_3:48440187-48440206 Msa0644530:intron 40.0%
!!! CTGCAGTTGCTTTTGCTAAA+AGG + chr4_3:48440238-48440257 None:intergenic 40.0%
! CTTTTAGCAAAAGCAACTGC+AGG - chr4_3:48440236-48440255 Msa0644530:intron 40.0%
TTTAGCAAAAGCAACTGCAG+GGG - chr4_3:48440238-48440257 Msa0644530:intron 40.0%
!! GTGCCATTTCTTTCCATATC+TGG - chr4_3:48440269-48440288 Msa0644530:intron 40.0%
ATGGAAATGTTTGTCGGTGT+TGG - chr4_3:48440302-48440321 Msa0644530:intron 40.0%
! GAAACTTGTTTCACGAAGCA+AGG - chr4_3:48440339-48440358 Msa0644530:intron 40.0%
TTGATGCAATTGGTCGGAAA+AGG - chr4_3:48440396-48440415 Msa0644530:intron 40.0%
TGATGCAATTGGTCGGAAAA+GGG - chr4_3:48440397-48440416 Msa0644530:intron 40.0%
! CAATTGTTGGTGGAAATGGA+TGG - chr4_3:48440470-48440489 Msa0644530:intron 40.0%
! TTGGTGGAAATGGATGGTTT+TGG - chr4_3:48440476-48440495 Msa0644530:intron 40.0%
GAGAATAATATGAAGGCTCG+TGG + chr4_3:48440667-48440686 None:intergenic 40.0%
AGTCACAATGGATCATTTCG+AGG - chr4_3:48440784-48440803 Msa0644530:intron 40.0%
! TGGTTTGGAGAAGAAGAACA+GGG - chr4_3:48440829-48440848 Msa0644530:intron 40.0%
GGTTCTCACTAGGAACATAT+TGG + chr4_3:48441459-48441478 None:intergenic 40.0%
! GATATGACTTGTATGACCCT+TGG - chr4_3:48441505-48441524 Msa0644530:intron 40.0%
! GATGGTTTCTGTCCCTTTTA+CGG - chr4_3:48441787-48441806 Msa0644530:CDS 40.0%
AATGAGAACCTGCCGTAAAA+GGG + chr4_3:48441802-48441821 None:intergenic 40.0%
AGTACTTCACCAAGATGACT+TGG - chr4_3:48442097-48442116 Msa0644530:CDS 40.0%
AGATTCGAACCAAGTCATCT+TGG + chr4_3:48442109-48442128 None:intergenic 40.0%
!! AGATGACTTGGTTCGAATCT+TGG - chr4_3:48442109-48442128 Msa0644530:CDS 40.0%
!! GATGACTTGGTTCGAATCTT+GGG - chr4_3:48442110-48442129 Msa0644530:CDS 40.0%
TAAGCTAGGGTTTCAAGATG+AGG - chr4_3:48442178-48442197 Msa0644530:intron 40.0%
GCTGATATGGACAACTTGTA+CGG - chr4_3:48442341-48442360 Msa0644530:five_prime_UTR 40.0%
TTGCACGGTGAAGCAAGATT+GGG - chr4_3:48437184-48437203 Msa0644530:CDS 45.0%
GCAAGATTGGGAACGCTTTA+TGG - chr4_3:48437196-48437215 Msa0644530:CDS 45.0%
GAAAACATGCGATGAAGCCT+AGG + chr4_3:48437358-48437377 None:intergenic 45.0%
! GGCACTTCCTTCTTTTCCTT+GGG + chr4_3:48437527-48437546 None:intergenic 45.0%
! TGGCACTTCCTTCTTTTCCT+TGG + chr4_3:48437528-48437547 None:intergenic 45.0%
!! GGAAAAGAAGGAAGTGCCAA+AGG - chr4_3:48437529-48437548 Msa0644530:CDS 45.0%
AAGTCAAACACAGAGGATGG+AGG - chr4_3:48437952-48437971 Msa0644530:CDS 45.0%
ATAGTCCCACCACCAACAAT+GGG + chr4_3:48438023-48438042 None:intergenic 45.0%
AATAGTCCCACCACCAACAA+TGG + chr4_3:48438024-48438043 None:intergenic 45.0%
ATCACGAGGACCAAGAGAAA+GGG + chr4_3:48438055-48438074 None:intergenic 45.0%
! ATTTTCTTATGTGGGGGGAG+GGG - chr4_3:48438129-48438148 Msa0644530:intron 45.0%
! GGCCTTATCTAATCCAGTGT+AGG + chr4_3:48438221-48438240 None:intergenic 45.0%
CCTTACAAAACTGTCCAGTG+AGG + chr4_3:48438278-48438297 None:intergenic 45.0%
!! CCTCACTGGACAGTTTTGTA+AGG - chr4_3:48438275-48438294 Msa0644530:intron 45.0%
AGACAGTTGTAGGACATCAG+TGG + chr4_3:48439141-48439160 None:intergenic 45.0%
TCTCATTGCTAAGAGACGTG+TGG + chr4_3:48439325-48439344 None:intergenic 45.0%
CTTCGCTGTCTGCTTGATTA+AGG + chr4_3:48439536-48439555 None:intergenic 45.0%
GCGCAAATCTCATTAACTCC+TGG + chr4_3:48439725-48439744 None:intergenic 45.0%
GTTCCCAAAATCAACAGGGT+TGG + chr4_3:48439747-48439766 None:intergenic 45.0%
! GAACTCTCTGGTTTATGGGA+AGG - chr4_3:48439763-48439782 Msa0644530:CDS 45.0%
! AGGAAAGTGCAAGGTGGATT+TGG - chr4_3:48439783-48439802 Msa0644530:CDS 45.0%
GGGAAAGGCAATGATCAACT+AGG + chr4_3:48439967-48439986 None:intergenic 45.0%
! AAAGGGTTTTTCCTGTGCCT+GGG + chr4_3:48440220-48440239 None:intergenic 45.0%
! AAAAGGGTTTTTCCTGTGCC+TGG + chr4_3:48440221-48440240 None:intergenic 45.0%
AACAAGTTTCTCACCCTGGA+TGG + chr4_3:48440329-48440348 None:intergenic 45.0%
GTGAAACAAGTTTCTCACCC+TGG + chr4_3:48440333-48440352 None:intergenic 45.0%
GATGCAATTGGTCGGAAAAG+GGG - chr4_3:48440398-48440417 Msa0644530:intron 45.0%
TGGTCACGACCTTTAATGTC+AGG + chr4_3:48440608-48440627 None:intergenic 45.0%
TCCAGCAAATCCTGGAGTAA+GGG + chr4_3:48440702-48440721 None:intergenic 45.0%
ATTTCGAGGCAGCTATCGAT+AGG - chr4_3:48440798-48440817 Msa0644530:intron 45.0%
GCAGCTATCGATAGGATCAT+TGG - chr4_3:48440806-48440825 Msa0644530:intron 45.0%
GCTATCGATAGGATCATTGG+TGG - chr4_3:48440809-48440828 Msa0644530:intron 45.0%
! CGATAGGATCATTGGTGGTT+TGG - chr4_3:48440814-48440833 Msa0644530:intron 45.0%
! GTGGTTTGGAGAAGAAGAAC+AGG - chr4_3:48440828-48440847 Msa0644530:intron 45.0%
TTGGAGAAGAAGAACAGGGT+AGG - chr4_3:48440833-48440852 Msa0644530:intron 45.0%
TTCCTAGTGAGAACCTTCTC+AGG - chr4_3:48441464-48441483 Msa0644530:intron 45.0%
TGAGAACCTTCTCAGGACAA+AGG - chr4_3:48441471-48441490 Msa0644530:intron 45.0%
! ATGACTTGTATGACCCTTGG+TGG - chr4_3:48441508-48441527 Msa0644530:intron 45.0%
CAATGAGAACCTGCCGTAAA+AGG + chr4_3:48441803-48441822 None:intergenic 45.0%
! CTTTTACGGCAGGTTCTCAT+TGG - chr4_3:48441801-48441820 Msa0644530:CDS 45.0%
!! CAAGTCATTTTGTGCTCCAG+TGG + chr4_3:48441835-48441854 None:intergenic 45.0%
CACTGGAGCACAAAATGACT+TGG - chr4_3:48441833-48441852 Msa0644530:CDS 45.0%
!! CATTTTGAGGGAAAGAGAGG+AGG + chr4_3:48441920-48441939 None:intergenic 45.0%
!! CGTCATTTTGAGGGAAAGAG+AGG + chr4_3:48441923-48441942 None:intergenic 45.0%
!! CAAACGCGTCGTCATTTTGA+GGG + chr4_3:48441932-48441951 None:intergenic 45.0%
CTCAAAATGACGACGCGTTT+GGG - chr4_3:48441931-48441950 Msa0644530:intron 45.0%
AAACCATACAGTGGCGATAC+TGG - chr4_3:48441954-48441973 Msa0644530:intron 45.0%
TTACCAGTATCGCCACTGTA+TGG + chr4_3:48441960-48441979 None:intergenic 45.0%
! TTGATCAGGAAGTGCGAGAT+TGG - chr4_3:48441985-48442004 Msa0644530:CDS 45.0%
! TGATCAGGAAGTGCGAGATT+GGG - chr4_3:48441986-48442005 Msa0644530:CDS 45.0%
AACTATGTGGGAACAACCTC+AGG + chr4_3:48442266-48442285 None:intergenic 45.0%
!!! TTTATTAATGATTTTTAATT+GGG - chr4_3:48437147-48437166 Msa0644530:CDS 5.0%
!!! AAACATTTTATATTTTAAAA+AGG + chr4_3:48440898-48440917 None:intergenic 5.0%
GTTGCACGGTGAAGCAAGAT+TGG - chr4_3:48437183-48437202 Msa0644530:CDS 50.0%
CTATCTCACCCCATTGTTGG+TGG - chr4_3:48438011-48438030 Msa0644530:CDS 50.0%
TAGTCCCACCACCAACAATG+GGG + chr4_3:48438022-48438041 None:intergenic 50.0%
GATCACGAGGACCAAGAGAA+AGG + chr4_3:48438056-48438075 None:intergenic 50.0%
! CAGGGCAATTTTCACCTCAC+TGG - chr4_3:48438261-48438280 Msa0644530:intron 50.0%
CAGAGTCTATCCAAGATCCG+CGG - chr4_3:48438333-48438352 Msa0644530:intron 50.0%
AGAGTCTATCCAAGATCCGC+GGG - chr4_3:48438334-48438353 Msa0644530:intron 50.0%
! TGCACTCAGGTCACCGTTTT+GGG - chr4_3:48438361-48438380 Msa0644530:intron 50.0%
CGCTCCAGATGTTTAGTCGT+AGG - chr4_3:48438396-48438415 Msa0644530:intron 50.0%
! TTTAGTCGTAGGCGCCGTAA+AGG - chr4_3:48438407-48438426 Msa0644530:intron 50.0%
! TTGGCTGGCTATTGCAGAGA+CGG + chr4_3:48438956-48438975 None:intergenic 50.0%
CAAGGAACCCTTCCTGCAAA+GGG - chr4_3:48439558-48439577 Msa0644530:CDS 50.0%
ACCAGATCCCTTTGCAGGAA+GGG + chr4_3:48439568-48439587 None:intergenic 50.0%
!!! TGCGCCAACCCTGTTGATTT+TGG - chr4_3:48439740-48439759 Msa0644530:intron 50.0%
!!! GCGCCAACCCTGTTGATTTT+GGG - chr4_3:48439741-48439760 Msa0644530:intron 50.0%
! ATGGGAAGGAAAGTGCAAGG+TGG - chr4_3:48439777-48439796 Msa0644530:CDS 50.0%
!! GTGCAAGGTGGATTTGGTGT+TGG - chr4_3:48439789-48439808 Msa0644530:CDS 50.0%
!! CAAGGTGGATTTGGTGTTGG+TGG - chr4_3:48439792-48439811 Msa0644530:CDS 50.0%
TCCACTGGTAAGAATGGTCG+TGG - chr4_3:48439819-48439838 Msa0644530:CDS 50.0%
TCCACGACCATTCTTACCAG+TGG + chr4_3:48439823-48439842 None:intergenic 50.0%
!! TCCAAAAGGTGCTCTTCTGG+TGG - chr4_3:48440190-48440209 Msa0644530:intron 50.0%
!! CCAAAAGGTGCTCTTCTGGT+GGG - chr4_3:48440191-48440210 Msa0644530:intron 50.0%
! AAGGGTTTTTCCTGTGCCTG+GGG + chr4_3:48440219-48440238 None:intergenic 50.0%
!!! GATGGTTTTGGAACCACTGC+TGG - chr4_3:48440488-48440507 Msa0644530:intron 50.0%
TAGCACAACAACTCCAGCAG+TGG + chr4_3:48440504-48440523 None:intergenic 50.0%
ACAACGCCTTACTTAGGCCT+GGG - chr4_3:48440552-48440571 Msa0644530:intron 50.0%
AAAACGCCCAGGCCTAAGTA+AGG + chr4_3:48440561-48440580 None:intergenic 50.0%
CTCCAGCAAATCCTGGAGTA+AGG + chr4_3:48440703-48440722 None:intergenic 50.0%
ATGTCTGCTCCAGCAAATCC+TGG + chr4_3:48440710-48440729 None:intergenic 50.0%
AAGCTGCTCTGATTGCTGCA+AGG - chr4_3:48440747-48440766 Msa0644530:intron 50.0%
ACCGTTGCTTACCATGAAGC+AGG - chr4_3:48441343-48441362 Msa0644530:CDS 50.0%
GCCTGCTTCATGGTAAGCAA+CGG + chr4_3:48441347-48441366 None:intergenic 50.0%
AGAACCAACCTGCAACAGCA+TGG + chr4_3:48441369-48441388 None:intergenic 50.0%
!! TGCTGTTGCAGGTTGGTTCT+TGG - chr4_3:48441369-48441388 Msa0644530:CDS 50.0%
GTCCTGAGAAGGTTCTCACT+AGG + chr4_3:48441469-48441488 None:intergenic 50.0%
! CAGGACAAAGGAGCAGCTTT+TGG - chr4_3:48441483-48441502 Msa0644530:intron 50.0%
! CTTGTATGACCCTTGGTGGT+CGG - chr4_3:48441512-48441531 Msa0644530:intron 50.0%
! TTGTATGACCCTTGGTGGTC+GGG - chr4_3:48441513-48441532 Msa0644530:intron 50.0%
!! ATTGGGAAGCATCAAGGAGC+AGG + chr4_3:48441744-48441763 None:intergenic 50.0%
! GTTTCTGTCCCTTTTACGGC+AGG - chr4_3:48441791-48441810 Msa0644530:CDS 50.0%
CTCATTGGAGCAATCTCCAC+TGG - chr4_3:48441816-48441835 Msa0644530:CDS 50.0%
!! CCAAACGCGTCGTCATTTTG+AGG + chr4_3:48441933-48441952 None:intergenic 50.0%
CCTCAAAATGACGACGCGTT+TGG - chr4_3:48441930-48441949 Msa0644530:intron 50.0%
GCGTTTGGGAAACCATACAG+TGG - chr4_3:48441945-48441964 Msa0644530:intron 50.0%
GTGGGTTCTGCACTCTTGAA+GGG + chr4_3:48442143-48442162 None:intergenic 50.0%
TGTGGGTTCTGCACTCTTGA+AGG + chr4_3:48442144-48442163 None:intergenic 50.0%
AACCATCGTCGATGAAGCCA+AGG - chr4_3:48442214-48442233 Msa0644530:intron 50.0%
ATCGTCGATGAAGCCAAGGA+GGG - chr4_3:48442218-48442237 Msa0644530:intron 50.0%
!! GTCTTCACCTCTAGAACCTG+AGG - chr4_3:48442247-48442266 Msa0644530:intron 50.0%
! GGAACAACCTCAGGTTCTAG+AGG + chr4_3:48442257-48442276 None:intergenic 50.0%
!! GAAGGAAGTGCCAAAGGGAG+AGG - chr4_3:48437535-48437554 Msa0644530:intron 55.0%
! TCTCACCCCATTGTTGGTGG+TGG - chr4_3:48438014-48438033 Msa0644530:CDS 55.0%
!! CTCACCCCATTGTTGGTGGT+GGG - chr4_3:48438015-48438034 Msa0644530:CDS 55.0%
CTTACCTGCTGCTGATCACG+AGG + chr4_3:48438069-48438088 None:intergenic 55.0%
CAAAACGGTGACCTGAGTGC+AGG + chr4_3:48438362-48438381 None:intergenic 55.0%
! CTGCACTCAGGTCACCGTTT+TGG - chr4_3:48438360-48438379 Msa0644530:intron 55.0%
GGCGCCTACGACTAAACATC+TGG + chr4_3:48438403-48438422 None:intergenic 55.0%
! TGGCTGGCTATTGCAGAGAC+GGG + chr4_3:48438955-48438974 None:intergenic 55.0%
CAAGCAGACAGCGAAGTCCA+AGG - chr4_3:48439540-48439559 Msa0644530:CDS 55.0%
CCTTTGCAGGAAGGGTTCCT+TGG + chr4_3:48439560-48439579 None:intergenic 55.0%
CCAAGGAACCCTTCCTGCAA+AGG - chr4_3:48439557-48439576 Msa0644530:CDS 55.0%
ACCCTTCCTGCAAAGGGATC+TGG - chr4_3:48439564-48439583 Msa0644530:CDS 55.0%
CACCAGATCCCTTTGCAGGA+AGG + chr4_3:48439569-48439588 None:intergenic 55.0%
CTTCCTGCAAAGGGATCTGG+TGG - chr4_3:48439567-48439586 Msa0644530:CDS 55.0%
!! GAGGAAGCGCAAGAAGCACT+AGG - chr4_3:48439645-48439664 Msa0644530:CDS 55.0%
!! GGTGGATTTGGTGTTGGTGG+TGG - chr4_3:48439795-48439814 Msa0644530:CDS 55.0%
GGTGGCTCCACTGGTAAGAA+TGG - chr4_3:48439813-48439832 Msa0644530:CDS 55.0%
! AGATGTTGCTGGCTGTGACG+AGG - chr4_3:48440094-48440113 Msa0644530:intron 55.0%
!!! CCCACCAGAAGAGCACCTTT+TGG + chr4_3:48440194-48440213 None:intergenic 55.0%
! AGGGTTTTTCCTGTGCCTGG+GGG + chr4_3:48440218-48440237 None:intergenic 55.0%
AAAGCAACTGCAGGGGAGTC+TGG - chr4_3:48440245-48440264 Msa0644530:intron 55.0%
!! TTGTCGGTGTTGGACCATCC+AGG - chr4_3:48440312-48440331 Msa0644530:intron 55.0%
!! TGTCGGTGTTGGACCATCCA+GGG - chr4_3:48440313-48440332 Msa0644530:intron 55.0%
ATTGGTCGGAAAAGGGGTCG+TGG - chr4_3:48440404-48440423 Msa0644530:intron 55.0%
GCTGGAGTTGTTGTGCTAGC+AGG - chr4_3:48440506-48440525 Msa0644530:intron 55.0%
GACAACGCCTTACTTAGGCC+TGG - chr4_3:48440551-48440570 Msa0644530:intron 55.0%
GCCCTTACTCCAGGATTTGC+TGG - chr4_3:48440698-48440717 Msa0644530:intron 55.0%
CAACAGCATGGCCTGCTTCA+TGG + chr4_3:48441357-48441376 None:intergenic 55.0%
GCTGCTCCTTTGTCCTGAGA+AGG + chr4_3:48441480-48441499 None:intergenic 55.0%
CTCCTTGGCTTCATCGACGA+TGG + chr4_3:48442219-48442238 None:intergenic 55.0%
CATCGTCGATGAAGCCAAGG+AGG - chr4_3:48442217-48442236 Msa0644530:intron 55.0%
ATGAAGCCAAGGAGGGTGGT+GGG - chr4_3:48442225-48442244 Msa0644530:intron 55.0%
TGGTCCTCGTGATCAGCAGC+AGG - chr4_3:48438062-48438081 Msa0644530:intron 60.0%
!! GGTCACCGTTTTGGGCCACT+CGG - chr4_3:48438369-48438388 Msa0644530:intron 60.0%
!! GTCACCGTTTTGGGCCACTC+GGG - chr4_3:48438370-48438389 Msa0644530:intron 60.0%
GTGACCCGAGTGGCCCAAAA+CGG + chr4_3:48438377-48438396 None:intergenic 60.0%
TGGCCACCAGATCCCTTTGC+AGG + chr4_3:48439573-48439592 None:intergenic 60.0%
AGGGGTCGTGGAGGTTTCTC+TGG - chr4_3:48440416-48440435 Msa0644530:intron 60.0%
ATCGTGCGGTCAAAACGCCC+AGG + chr4_3:48440572-48440591 None:intergenic 60.0%
AGGCTTGCAGCCCTTACTCC+AGG - chr4_3:48440689-48440708 Msa0644530:intron 60.0%
GAAGCAGGCCATGCTGTTGC+AGG - chr4_3:48441358-48441377 Msa0644530:CDS 60.0%
CAGGCCATGCTGTTGCAGGT+TGG - chr4_3:48441362-48441381 Msa0644530:CDS 60.0%
GTCGATGAAGCCAAGGAGGG+TGG - chr4_3:48442221-48442240 Msa0644530:intron 60.0%
GATGAAGCCAAGGAGGGTGG+TGG - chr4_3:48442224-48442243 Msa0644530:intron 60.0%
TGAAGACCCACCACCCTCCT+TGG + chr4_3:48442234-48442253 None:intergenic 60.0%
! CATCTGGAGCGTGACCCGAG+TGG + chr4_3:48438387-48438406 None:intergenic 65.0%
!! GGTGTTGGTGGTGGCTCCAC+TGG - chr4_3:48439804-48439823 Msa0644530:CDS 65.0%
GGTCGGAAAAGGGGTCGTGG+AGG - chr4_3:48440407-48440426 Msa0644530:intron 65.0%
CTCGCGGCACAGCAGCACTT+GGG - chr4_3:48441428-48441447 Msa0644530:intron 65.0%
GTGCAGGTGCCCGCGGATCT+TGG + chr4_3:48438346-48438365 None:intergenic 70.0%
ATCCGCGGGCACCTGCACTC+AGG - chr4_3:48438348-48438367 Msa0644530:intron 70.0%
GACCTGAGTGCAGGTGCCCG+CGG + chr4_3:48438353-48438372 None:intergenic 70.0%
! GCTCTTCTGGTGGGTCCCCC+AGG - chr4_3:48440200-48440219 Msa0644530:intron 70.0%
! CCAAGTGCTGCTGTGCCGCG+AGG + chr4_3:48441430-48441449 None:intergenic 70.0%
CCTCGCGGCACAGCAGCACT+TGG - chr4_3:48441427-48441446 Msa0644530:intron 70.0%
CTCGGCAGCCCGACCACCAA+GGG + chr4_3:48441524-48441543 None:intergenic 70.0%
! CTGGTGGGTCCCCCAGGCAC+AGG - chr4_3:48440206-48440225 Msa0644530:intron 75.0%
GCTCGGCAGCCCGACCACCA+AGG + chr4_3:48441525-48441544 None:intergenic 75.0%
TGGTGGTCGGGCTGCCGAGC+AGG - chr4_3:48441525-48441544 Msa0644530:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 48436896 48442466 48436896 ID=Msa0644530;Name=Msa0644530
chr4_3 mRNA 48436896 48442466 48436896 ID=Msa0644530-mRNA-1;Parent=Msa0644530;Name=Msa0644530-mRNA-1;_AED=0.05;_eAED=0.05;_QI=148|0.6|0.54|1|0.6|0.54|11|183|768
chr4_3 exon 48436896 48437549 48436896 ID=Msa0644530-mRNA-1:exon:11523;Parent=Msa0644530-mRNA-1
chr4_3 exon 48437816 48438043 48437816 ID=Msa0644530-mRNA-1:exon:11522;Parent=Msa0644530-mRNA-1
chr4_3 exon 48438512 48438744 48438512 ID=Msa0644530-mRNA-1:exon:11521;Parent=Msa0644530-mRNA-1
chr4_3 exon 48438787 48439028 48438787 ID=Msa0644530-mRNA-1:exon:11520;Parent=Msa0644530-mRNA-1
chr4_3 exon 48439053 48439279 48439053 ID=Msa0644530-mRNA-1:exon:11519;Parent=Msa0644530-mRNA-1
chr4_3 exon 48439496 48439742 48439496 ID=Msa0644530-mRNA-1:exon:11518;Parent=Msa0644530-mRNA-1
chr4_3 exon 48439760 48439932 48439760 ID=Msa0644530-mRNA-1:exon:11517;Parent=Msa0644530-mRNA-1
chr4_3 exon 48441279 48441418 48441279 ID=Msa0644530-mRNA-1:exon:11516;Parent=Msa0644530-mRNA-1
chr4_3 exon 48441784 48441855 48441784 ID=Msa0644530-mRNA-1:exon:11515;Parent=Msa0644530-mRNA-1
chr4_3 exon 48441962 48442184 48441962 ID=Msa0644530-mRNA-1:exon:11514;Parent=Msa0644530-mRNA-1
chr4_3 exon 48442268 48442466 48442268 ID=Msa0644530-mRNA-1:exon:11513;Parent=Msa0644530-mRNA-1
chr4_3 five_prime_UTR 48442319 48442466 48442319 ID=Msa0644530-mRNA-1:five_prime_utr;Parent=Msa0644530-mRNA-1
chr4_3 CDS 48442268 48442318 48442268 ID=Msa0644530-mRNA-1:cds;Parent=Msa0644530-mRNA-1
chr4_3 CDS 48441962 48442184 48441962 ID=Msa0644530-mRNA-1:cds;Parent=Msa0644530-mRNA-1
chr4_3 CDS 48441784 48441855 48441784 ID=Msa0644530-mRNA-1:cds;Parent=Msa0644530-mRNA-1
chr4_3 CDS 48441279 48441418 48441279 ID=Msa0644530-mRNA-1:cds;Parent=Msa0644530-mRNA-1
chr4_3 CDS 48439760 48439932 48439760 ID=Msa0644530-mRNA-1:cds;Parent=Msa0644530-mRNA-1
chr4_3 CDS 48439496 48439742 48439496 ID=Msa0644530-mRNA-1:cds;Parent=Msa0644530-mRNA-1
chr4_3 CDS 48439053 48439279 48439053 ID=Msa0644530-mRNA-1:cds;Parent=Msa0644530-mRNA-1
chr4_3 CDS 48438787 48439028 48438787 ID=Msa0644530-mRNA-1:cds;Parent=Msa0644530-mRNA-1
chr4_3 CDS 48438512 48438744 48438512 ID=Msa0644530-mRNA-1:cds;Parent=Msa0644530-mRNA-1
chr4_3 CDS 48437816 48438043 48437816 ID=Msa0644530-mRNA-1:cds;Parent=Msa0644530-mRNA-1
chr4_3 CDS 48437079 48437549 48437079 ID=Msa0644530-mRNA-1:cds;Parent=Msa0644530-mRNA-1
chr4_3 three_prime_UTR 48436896 48437078 48436896 ID=Msa0644530-mRNA-1:three_prime_utr;Parent=Msa0644530-mRNA-1
Gene Sequence

>Msa0644530

ATGATTTTTTCAAGAATTGGGCGTTCTCTATCGCGTTCTTCTCGCGTTAAAAATTTGTTGCACGGTGAAGCAAGATTGGGAACGCTTTATGGAGTTTCGAGAACGAATGTTTTTATCGATGATGTTGAAAAGGGATTAGGGTTTTTAAGGGGTTATGTATCTTCTGCCATAGCTCGTAATAATGGGTTTGCTTCAAATTTGTATGATTTTAAATCAATTGCTGCAAACCCTAGGCTTCATCGCATGTTTTCGAGCGAATCCCCAAAGAAAAAGAATTATGAAAAGTTTTATCCCAAGGAAAAGAAGGAAGTGCCAAAGGGAGAGGAGAAAAAATCTGAGTCTAAAGATGAGTCAAAGTCAAACACAGAGGATGGAGGAAGTTTTCACGAAGCTTTTATCAAACAGTTTCAAAACTATCTCACCCCATTGTTGGTGGTGGGACTATTTCTTTCATCCCTTTCTCTTGGTCCTCGTGATCAGCAGCAGATTAGTTTCCAGGAGTTTAAAAATAAGCTTTTGGAACCAGGATTAGTAGACCATATTGTTGTCTCCAACAAATCAGTTGCCAAAATATATGTGAGGAACTCTCCCTTAATCAAGCAGACAGCGAAGTCCAAGGAACCCTTCCTGCAAAGGGATCTGGTGGCCAATTTAAATATTGTTGAGTCTTTTGAGGAGAAGTTAGAGGAAGCGCAAGAAGCACTAGGCGTTGACTCTCACAATTTTGTACCTGTTATATATTCTTCTGAAATGGTTTGGTACCAGGAGTTAATGAGATTTGCGCCAACCCTGTTGATTTTGGGAACTCTCTGGTTTATGGGAAGGAAAGTGCAAGGTGGATTTGGTGTTGGTGGTGGCTCCACTGGTAAGAATGGTCGTGGAATATTTAACATTGGAAAAGCACAAGTTTATTTTAAAGATGTTGCTGGCTGTGACGAGGCAAAGCAAGAAATTATGGAGTTTGTGCACTTCCTCAAGAATCCTAAGAAATACGAAGAGCTTGGTGCCAAAATTCCAAAAGGTGCTCTTCTGGTGGGTCCCCCAGGCACAGGAAAAACCCTTTTAGCAAAAGCAACTGCAGGGGAGTCTGGTGTGCCATTTCTTTCCATATCTGGTTCTGATTTCATGGAAATGGTGAGAAACTTGTTTCACGAAGCAAGGCAGTGTGCTCCCAGTATAGTATTTATTGATGAGATTGATGCAATTGGTCGGAAAAGGGGTCGTGGAGGTTTCTCTGGTTCAAATGATGAGCGTGAAAGTACTTTAAATCAATTGTTGGTGGAAATGGATGGTTTTGGAACCACTGCTGGAGTTGTTGTGCTAGCAGGTACAAATAGAGCTGATATATTAGACAACGCCTTACTTAGGCCTGGGCGTCGTGACCAGATATTTCAGATTTATTTGAAAAAAATCAAACTTGACCACGAGCCTTCATATTATTCTCAAAGGCTTGCAGCCCTTACTCCAGGATTTGCTGGAGCAGACATTGCTAATGTTTGCAATGAAGCTGCTCTGATTGCTGCAAGGACTGATGAATCACAAGTCACAATGGATCATTTCGAGGCAGCTATCGATAGGATCATTGGTGGTTTGGAGAAGAAGAACAGGGTAATAAGTAAGCTGGAAAGGCGTACCGTTGCTTACCATGAAGCAGGCCATGCTGTTGCAGGTTGGTTCTTGGAACATTGTGAGCCATTGTTGAAAGTAACTATTGTTCCTCGCGGCACAGCAGCACTTGGGTTTGCCCAATATGTTCCTAGTGAGAACCTTCTCAGGACAAAGGAGCAGCTTTTGGATATGACTTGTATGACCCTTGGTGGTCGGGCTGCCGAGCAGGTTCTCATTGGAGCAATCTCCACTGGAGCACAAAATGACTTGGAGAAAGTGACCAAGATGACATATGCCCAAATAGCCATCTATGGTTTCAGTGAAAAAGTGGGCCTCCTCTCTTTCCCTCAAAATGACGACGCGTTTGGGAAACCATACAGTGGCGATACTGGTAACATCATTGATCAGGAAGTGCGAGATTGGGTGAAACATGCATATGAACGTACCATACAGCTTATAGAAGAACACAAGGAGAAAATAGCTCAAATTGCAGAGTTACTTCTCGAAAAAGAAGTACTTCACCAAGATGACTTGGTTCGAATCTTGGGTGAACGACCCTTCAAGAGTGCAGAACCCACAAATTACGATAGATTTAAGCTAGGGTTTCAAGATGAGGAGAAAGCTGCAGAAACCATCGTCGATGAAGCCAAGGAGGGTGGTGGGTCTTCACCTCTAGAACCTGAGGTTGTTCCCACATAG
Protein sequence

>Msa0644530

MIFSRIGRSLSRSSRVKNLLHGEARLGTLYGVSRTNVFIDDVEKGLGFLRGYVSSAIARNNGFASNLYDFKSIAANPRLHRMFSSESPKKKNYEKFYPKEKKEVPKGEEKKSESKDESKSNTEDGGSFHEAFIKQFQNYLTPLLVVGLFLSSLSLGPRDQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKIYVRNSPLIKQTAKSKEPFLQRDLVANLNIVESFEEKLEEAQEALGVDSHNFVPVIYSSEMVWYQELMRFAPTLLILGTLWFMGRKVQGGFGVGGGSTGKNGRGIFNIGKAQVYFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMVRNLFHEARQCAPSIVFIDEIDAIGRKRGRGGFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRADILDNALLRPGRRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARTDESQVTMDHFEAAIDRIIGGLEKKNRVISKLERRTVAYHEAGHAVAGWFLEHCEPLLKVTIVPRGTAALGFAQYVPSENLLRTKEQLLDMTCMTLGGRAAEQVLIGAISTGAQNDLEKVTKMTYAQIAIYGFSEKVGLLSFPQNDDAFGKPYSGDTGNIIDQEVRDWVKHAYERTIQLIEEHKEKIAQIAELLLEKEVLHQDDLVRILGERPFKSAEPTNYDRFKLGFQDEEKAAETIVDEAKEGGGSSPLEPEVVPT*