AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0649240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0649240 MtrunA17_Chr4g0041131 98.758 966 12 0 1 966 1 966 0.0 1978
Msa0649240 MtrunA17_Chr2g0325821 91.511 966 82 0 1 966 1 966 0.0 1821
Msa0649240 MtrunA17_Chr8g0360571 86.674 968 126 2 1 966 1 967 0.0 1743
Msa0649240 MtrunA17_Chr2g0315891 84.679 966 145 2 3 966 2 966 0.0 1697
Msa0649240 MtrunA17_Chr1g0198921 45.673 624 290 5 359 966 449 1039 1.70e-173 533
Msa0649240 MtrunA17_Chr1g0198921 39.223 283 156 6 77 359 71 337 2.71e-51 196
Msa0649240 MtrunA17_Chr0c01g0489521 45.853 639 281 8 359 966 548 1152 4.77e-171 530
Msa0649240 MtrunA17_Chr0c01g0489521 34.539 304 170 6 77 367 113 400 2.95e-45 177
Msa0649240 MtrunA17_Chr1g0148101 64.815 378 67 7 461 838 1 312 1.06e-149 446
Msa0649240 MtrunA17_Chr1g0148111 46.154 130 30 2 339 428 9 138 2.88e-25 102
Msa0649240 MtrunA17_Chr1g0148091 88.235 51 6 0 916 966 1 51 4.07e-24 95.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0649240 AT2G42600.2 86.749 966 125 3 1 966 1 963 0.0 1732
Msa0649240 AT2G42600.1 86.749 966 125 3 1 966 1 963 0.0 1732
Msa0649240 AT2G42600.3 86.749 966 125 3 1 966 1 963 0.0 1732
Msa0649240 AT1G53310.2 85.729 967 137 1 1 966 1 967 0.0 1728
Msa0649240 AT1G53310.1 85.729 967 137 1 1 966 1 967 0.0 1728
Msa0649240 AT1G53310.3 85.729 967 137 1 1 966 1 967 0.0 1728
Msa0649240 AT3G14940.1 85.124 968 142 2 1 966 1 968 0.0 1715
Msa0649240 AT3G14940.2 85.124 968 142 2 1 966 1 968 0.0 1715
Msa0649240 AT1G68750.1 47.097 620 279 6 363 966 446 1032 1.25e-175 538
Msa0649240 AT1G68750.1 35.238 315 181 6 36 342 23 322 1.51e-46 181
Msa0649240 AT3G42628.1 86.667 45 6 0 1 45 1 45 1.05e-17 77.8

Find 265 sgRNAs with CRISPR-Local

Find 485 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGCTTAACTTGGCCAATT+TGG 0.190934 4_3:+55853083 Msa0649240:CDS
CTATTATTCAATTCTCTTCA+TGG 0.222283 4_3:+55854309 Msa0649240:CDS
TACCCTTCATTGTCAGAATA+AGG 0.227713 4_3:-55858482 None:intergenic
TTGAACTTCTTCTGCCAAAT+TGG 0.233645 4_3:-55853097 None:intergenic
TGAATAATAGGGGCATTATA+TGG 0.240141 4_3:-55854296 None:intergenic
CATGAAGAGAATTGAATAAT+AGG 0.245501 4_3:-55854308 None:intergenic
AGTGGAAAGCGCCCTCTCTT+TGG 0.285577 4_3:+55856095 Msa0649240:CDS
GAAGAGCCAAACTGTTGATT+TGG 0.288566 4_3:+55853266 Msa0649240:CDS
TGCGGCAAGTTTCCACCTTC+GGG 0.288964 4_3:+55855931 Msa0649240:CDS
TCTTCATTGCTGCAGAGTTT+TGG 0.292517 4_3:+55855120 Msa0649240:intron
GAGCCATATCGTGTTATTCT+TGG 0.294821 4_3:+55855161 Msa0649240:CDS
ATAATCAATGGCCATTCTTC+AGG 0.296599 4_3:+55857813 Msa0649240:CDS
TTGCGGCAAGTTTCCACCTT+CGG 0.300761 4_3:+55855930 Msa0649240:CDS
TCAGACAAGGTTTCACTTAC+CGG 0.310740 4_3:+55857712 Msa0649240:CDS
AATCTTTGTTTGTAGGTTGC+TGG 0.319850 4_3:+55858222 Msa0649240:intron
AGGGTACGCCATTCTGGTTT+TGG 0.320605 4_3:-55856737 None:intergenic
AAAATATTTCGAAGGTATTC+GGG 0.321914 4_3:+55851506 Msa0649240:five_prime_UTR
GGTCATTTGGAGAGAGATTA+AGG 0.331605 4_3:+55857927 Msa0649240:CDS
TCCATGAGGGTACGCCATTC+TGG 0.336540 4_3:-55856743 None:intergenic
TACTATTCATGGCTCACTTC+GGG 0.343501 4_3:+55856598 Msa0649240:CDS
GAAGTTATTGAACAGTCATT+TGG 0.344843 4_3:+55856635 Msa0649240:CDS
TCGTTTCCTTGATATTCTTC+AGG 0.348595 4_3:+55851861 Msa0649240:CDS
CTCAACTTCACATGGTAATC+AGG 0.350176 4_3:-55858360 None:intergenic
ATGAAGAGAATTGAATAATA+GGG 0.356078 4_3:-55854307 None:intergenic
GCAACTCCTGAGTTGGAGTA+TGG 0.358150 4_3:+55857599 Msa0649240:CDS
TATACATATCTCGAAGCATT+TGG 0.361346 4_3:-55857793 None:intergenic
ATAAAGGTTGCAAAGGAGTT+TGG 0.362494 4_3:+55856485 Msa0649240:CDS
GAACTTCCTTCAGACAGCTT+TGG 0.374977 4_3:+55856179 Msa0649240:CDS
TTGTTTGTGCCGCTACTTTG+AGG 0.377654 4_3:+55851559 Msa0649240:five_prime_UTR
AGAAGACTTCCATCAGCTAT+TGG 0.379239 4_3:-55855900 None:intergenic
TCGTAAAGAGTTGCGATCCC+TGG 0.380973 4_3:-55857878 None:intergenic
AGAGATGCAAAACATTATAT+TGG 0.382727 4_3:+55854885 Msa0649240:CDS
TTACCGGTATGGCTTGGCTT+TGG 0.386851 4_3:+55857728 Msa0649240:CDS
CGGAGTCTTTGCTTCAAGTA+AGG 0.387544 4_3:-55858270 None:intergenic
TCACCAAGAATAACACGATA+TGG 0.393974 4_3:-55855164 None:intergenic
GGGACTGTAGGAAGGGGAGG+AGG 0.394120 4_3:+55856539 Msa0649240:CDS
GGAGGGACTGTAGGAAGGGG+AGG 0.395148 4_3:+55856536 Msa0649240:CDS
GGCTCAAGAAGAACTTATAA+AGG 0.396803 4_3:+55856469 Msa0649240:CDS
ATGCTGACCGGTCTTGATGC+TGG 0.403921 4_3:+55853027 Msa0649240:CDS
CTATCCCTTGGATCTTTGCC+TGG 0.406100 4_3:+55857687 Msa0649240:CDS
AGAGGAGGGACTGTAGGAAG+GGG 0.408426 4_3:+55856533 Msa0649240:CDS
CTGGTCGTTTCTCTGCAGCT+TGG 0.409189 4_3:+55856435 Msa0649240:CDS
GCTTGATTCCATGCAGTCCT+TGG 0.409758 4_3:-55858394 None:intergenic
TTGATTCACAAGCCTCTTGA+AGG 0.409994 4_3:-55853208 None:intergenic
TGCTGACCGGTCTTGATGCT+GGG 0.410058 4_3:+55853028 Msa0649240:CDS
AGGATTAAGTTATTAAAGAA+GGG 0.411137 4_3:+55853135 Msa0649240:CDS
AACTGTTATGAGCTGTCTGC+TGG 0.415140 4_3:+55852958 Msa0649240:CDS
AAGGATTAAGTTATTAAAGA+AGG 0.415758 4_3:+55853134 Msa0649240:CDS
CAGCCACCAGATACTATTCA+TGG 0.419660 4_3:+55856587 Msa0649240:CDS
TGTACCATTCTATAGAGAAT+AGG 0.420676 4_3:-55856352 None:intergenic
TGGTCGTTTCTCTGCAGCTT+GGG 0.420848 4_3:+55856436 Msa0649240:CDS
TGTAACTTCAGGAGTTACTC+TGG 0.421093 4_3:-55854608 None:intergenic
TCAGATGAACTGTGGTCATT+TGG 0.428309 4_3:+55857914 Msa0649240:CDS
TCATCATCAGACACCTTACT+AGG 0.429084 4_3:-55851805 None:intergenic
CCTGCCCTCATTTCGTCTTG+TGG 0.432737 4_3:-55854176 None:intergenic
TATCTTCACAAATGTTGAAC+AGG 0.432953 4_3:+55855268 Msa0649240:CDS
ATAACAAACCACTTGGAGAT+TGG 0.434973 4_3:+55856017 Msa0649240:CDS
GCTACTTTCATGAGACAATC+TGG 0.436940 4_3:+55854204 Msa0649240:CDS
AATAATGGAACGACCCTTAG+TGG 0.437559 4_3:-55856284 None:intergenic
AAGAGGAGGGACTGTAGGAA+GGG 0.437847 4_3:+55856532 Msa0649240:CDS
TACCATGAGGAGAAGGCTCT+TGG 0.438418 4_3:-55857966 None:intergenic
TACAAGGGATGTGTGTTTGC+TGG 0.438525 4_3:+55854627 Msa0649240:CDS
AGTTTCACAAGCTCTGCTGC+CGG 0.438981 4_3:-55858420 None:intergenic
TGGTGCTTATATCATTTCAA+TGG 0.439632 4_3:+55856199 Msa0649240:CDS
GTAACTTCAGGAGTTACTCT+GGG 0.439694 4_3:-55854607 None:intergenic
TTAAGACCAAATCAACAGTT+TGG 0.440272 4_3:-55853272 None:intergenic
TCACTTCGGGTTACAGTTCA+AGG 0.446799 4_3:+55856611 Msa0649240:CDS
ACCCTTCATTGTCAGAATAA+GGG 0.448948 4_3:-55858481 None:intergenic
ATACAATGTTTGTAACTTTG+TGG 0.449645 4_3:+55858561 Msa0649240:three_prime_UTR
AGTGAGCCATGAATAGTATC+TGG 0.452577 4_3:-55856593 None:intergenic
ATGATAGGATACTCAGACTC+AGG 0.456922 4_3:+55856404 Msa0649240:CDS
AATTGAGGATCTCATGTTTG+AGG 0.457137 4_3:+55854684 Msa0649240:CDS
TCAAGTAAGGGTCTCCTTCA+AGG 0.457214 4_3:-55858257 None:intergenic
GAGGTTGTTAGCACCTAGTA+AGG 0.458731 4_3:+55851792 Msa0649240:CDS
GGAAAACAAGAAGTTATGAT+AGG 0.459137 4_3:+55856389 Msa0649240:CDS
TTCAAATTGCCTACCGCAGA+AGG 0.459407 4_3:+55853115 Msa0649240:CDS
GAATAATAGGGGCATTATAT+GGG 0.461196 4_3:-55854295 None:intergenic
TGCGATCCCTGGGTCTCCCT+TGG 0.462950 4_3:-55857867 None:intergenic
GTTTCACAAGCTCTGCTGCC+GGG 0.463997 4_3:-55858419 None:intergenic
GAGTGACTATGCTCCTGGTT+TGG 0.464165 4_3:+55858452 Msa0649240:CDS
CTACAGTCCCTCCTCTTCCA+TGG 0.466555 4_3:-55856526 None:intergenic
TGAAGAAATTGCTGATGTGC+TGG 0.468666 4_3:+55856136 Msa0649240:CDS
TATTCAATTCTCTTCATGGA+TGG 0.469817 4_3:+55854313 Msa0649240:CDS
GAACAATAATCCTCAGAAGT+TGG 0.469847 4_3:+55852990 Msa0649240:CDS
CTCATTTCGTCTTGTGGTGT+AGG 0.471557 4_3:-55854170 None:intergenic
CACCCTTGACTTAGTTGAGA+TGG 0.471618 4_3:+55857838 Msa0649240:CDS
CACACATCCCTTGTAACTTC+AGG 0.472871 4_3:-55854619 None:intergenic
ATTCTCTCACATGCTTAACT+TGG 0.475948 4_3:+55853074 Msa0649240:CDS
TCAAGTTCCTGCTTATCATC+TGG 0.476984 4_3:-55853485 None:intergenic
CTGAGGAACGCAGGCAGGAA+TGG 0.477948 4_3:+55856057 Msa0649240:CDS
CAAGGTTTCACTTACCGGTA+TGG 0.478906 4_3:+55857717 Msa0649240:CDS
GAGCTGTCTGCTGGGTATGA+AGG 0.478971 4_3:+55852967 Msa0649240:CDS
TGTGCCTGTCTGATTCTTGA+CGG 0.480358 4_3:-55855977 None:intergenic
ACAAAGATCTGCGAACAGAC+TGG 0.483079 4_3:-55853308 None:intergenic
CCTCAGAAGTTGGAGGAACT+CGG 0.488140 4_3:+55853000 Msa0649240:CDS
CCGAGTTCCTCCAACTTCTG+AGG 0.491030 4_3:-55853000 None:intergenic
AGAGTGAGAAAATGACAAGT+AGG 0.492768 4_3:+55851734 Msa0649240:exon
ATACCGTTTCTCGGATATCA+TGG 0.493166 4_3:-55851894 None:intergenic
ATTCTTCCATACTCCAACTC+AGG 0.496776 4_3:-55857605 None:intergenic
AAGTAGGAAGCTAGAGAAGA+TGG 0.499729 4_3:+55851750 Msa0649240:CDS
ACCAGAATGGCGTACCCTCA+TGG 0.502777 4_3:+55856742 Msa0649240:CDS
ATTCAATTCTCTTCATGGAT+GGG 0.502789 4_3:+55854314 Msa0649240:CDS
AGATTGGATCTTATCGAGAA+TGG 0.503039 4_3:+55856033 Msa0649240:CDS
AATCACTCCGTGCTATCCCT+TGG 0.506311 4_3:+55857675 Msa0649240:CDS
CTACACCACAAGACGAAATG+AGG 0.506313 4_3:+55854171 Msa0649240:CDS
CGTAAAGAGTTGCGATCCCT+GGG 0.509144 4_3:-55857877 None:intergenic
TTTCACTTACCGGTATGGCT+TGG 0.511174 4_3:+55857722 Msa0649240:CDS
GTGATGTGAAGCAGCCACTA+AGG 0.511270 4_3:+55856270 Msa0649240:CDS
CCCGCCTATTCTCTATAGAA+TGG 0.513282 4_3:+55856348 Msa0649240:CDS
ATACTATTCATGGCTCACTT+CGG 0.516752 4_3:+55856597 Msa0649240:CDS
AATAGGCGGGCTATTGCAGC+AGG 0.518347 4_3:-55856335 None:intergenic
TACCCTTATTCTGACAATGA+AGG 0.519844 4_3:+55858479 Msa0649240:CDS
TGTAGGCTTGCAAGACATTG+AGG 0.520686 4_3:-55858317 None:intergenic
ATGGTCTGAGGAACGCAGGC+AGG 0.520864 4_3:+55856052 Msa0649240:CDS
GAAGAGGAGGGACTGTAGGA+AGG 0.521831 4_3:+55856531 Msa0649240:CDS
GAGTAACTCCTGAAGTTACA+AGG 0.522320 4_3:+55854611 Msa0649240:CDS
AACCAAGAGCCTTCTCCTCA+TGG 0.523734 4_3:+55857964 Msa0649240:CDS
GATAATATAGCAAGATGAGT+GGG 0.523758 4_3:-55856563 None:intergenic
CTTACAATGTTCCATGGAAG+AGG 0.523977 4_3:+55856515 Msa0649240:CDS
TAACTTAATCCTTCTGCGGT+AGG 0.524246 4_3:-55853124 None:intergenic
ACTGCAGGCAACTCCTGAGT+TGG 0.524473 4_3:+55857592 Msa0649240:intron
CTTTGTTGCAGAAGCACGGA+AGG 0.524687 4_3:+55853325 Msa0649240:CDS
GTTAAGCTTACAATGTTCCA+TGG 0.524698 4_3:+55856509 Msa0649240:CDS
TAATCAATGGCCATTCTTCA+GGG 0.525272 4_3:+55857814 Msa0649240:CDS
TGACTATGCTCCTGGTTTGG+AGG 0.526313 4_3:+55858455 Msa0649240:CDS
GGACACAAAGATATCCTTGA+AGG 0.526819 4_3:+55858243 Msa0649240:CDS
GTTGAGATGGTGTTTGCCAA+GGG 0.527027 4_3:+55857851 Msa0649240:CDS
GATATTCTTCAGGATTTGCA+TGG 0.527119 4_3:+55851871 Msa0649240:CDS
TGCAGCTTGGGCAATGTACA+AGG 0.527253 4_3:+55856448 Msa0649240:CDS
TTCGAGATATGTATAATCAA+TGG 0.527674 4_3:+55857801 Msa0649240:CDS
ATAACACGATATGGCTCAGT+TGG 0.528058 4_3:-55855155 None:intergenic
GTGTTTGCCAAGGGAGACCC+AGG 0.532556 4_3:+55857860 Msa0649240:CDS
TCCCATCGGCTAGTAACTGT+CGG 0.533020 4_3:-55855223 None:intergenic
CCCATCGGCTAGTAACTGTC+GGG 0.533655 4_3:-55855222 None:intergenic
AGTTGAGATGGTGTTTGCCA+AGG 0.534758 4_3:+55857850 Msa0649240:CDS
GGAGTCTTTGCTTCAAGTAA+GGG 0.540491 4_3:-55858269 None:intergenic
GACCTATAGCATAGTTCAAG+AGG 0.540658 4_3:-55855855 None:intergenic
CTCATCATTGCAGCGCCACA+TGG 0.541143 4_3:-55854823 None:intergenic
ACGGATTCGCTTCAGTGTGT+AGG 0.541619 4_3:-55858334 None:intergenic
AGGAGTTCTTCGAATTTCAT+CGG 0.542789 4_3:-55854147 None:intergenic
TGTTTGTAACTTTGTGGCAT+GGG 0.544048 4_3:+55858567 Msa0649240:three_prime_UTR
ACAATGAAGGGTATAGCTGC+TGG 0.544608 4_3:+55858492 Msa0649240:CDS
AGCTGTCTGCTGGGTATGAA+GGG 0.547157 4_3:+55852968 Msa0649240:CDS
TCAAGGGTGACCCTGAAGAA+TGG 0.548543 4_3:-55857824 None:intergenic
ACACGATATGGCTCAGTTGG+AGG 0.549242 4_3:-55855152 None:intergenic
GTGTTTGCTGGCTAGAATGA+TGG 0.549302 4_3:+55854639 Msa0649240:CDS
CCTACGAGTGACTATGCTCC+TGG 0.549690 4_3:+55858447 Msa0649240:CDS
GCTCCAAAGCCAAGCCATAC+CGG 0.551875 4_3:-55857731 None:intergenic
AGTGATTCAATTCCTCCACT+TGG 0.553696 4_3:-55857659 None:intergenic
GCAAATCCTGAAGAATATCA+AGG 0.554159 4_3:-55851867 None:intergenic
GTGAAACCTTGTCTGAGTCC+AGG 0.556828 4_3:-55857705 None:intergenic
CTCAGAAGTTGGAGGAACTC+GGG 0.558753 4_3:+55853001 Msa0649240:CDS
GCCCGACAGTTACTAGCCGA+TGG 0.559429 4_3:+55855221 Msa0649240:CDS
TGAGTCCAGGCAAAGATCCA+AGG 0.561806 4_3:-55857692 None:intergenic
TCTTTGCCTGGACTCAGACA+AGG 0.562118 4_3:+55857699 Msa0649240:CDS
ATTCAAGCATGTAATTGAGA+AGG 0.562441 4_3:+55857757 Msa0649240:CDS
AGATCTTTGTTGCAGAAGCA+CGG 0.562470 4_3:+55853321 Msa0649240:CDS
TGGCCATGATATCCGAGAAA+CGG 0.562619 4_3:+55851891 Msa0649240:CDS
TATTACACCAGATGATAAGC+AGG 0.563105 4_3:+55853478 Msa0649240:CDS
AGCCTCTTGAACTATGCTAT+AGG 0.564036 4_3:+55855853 Msa0649240:CDS
GGATTAAGTTATTAAAGAAG+GGG 0.564747 4_3:+55853136 Msa0649240:CDS
GTTACAAACATTGTATACAT+AGG 0.564999 4_3:-55858554 None:intergenic
TTCAATGTCTGACTCAGTGA+TGG 0.567281 4_3:-55853181 None:intergenic
ATTTCGTCTTGTGGTGTAGG+AGG 0.568285 4_3:-55854167 None:intergenic
CATGGAAGAGGAGGGACTGT+AGG 0.570009 4_3:+55856527 Msa0649240:CDS
ACATTTGTCCAAGGACTGCA+TGG 0.570460 4_3:+55858386 Msa0649240:CDS
CCGTCTCACCAAAACCAGAA+TGG 0.571215 4_3:+55856729 Msa0649240:CDS
CAAAGATCTGCGAACAGACT+GGG 0.572091 4_3:-55853307 None:intergenic
AGAACTTATAAAGGTTGCAA+AGG 0.572152 4_3:+55856478 Msa0649240:CDS
GTGTTATTCTTGGTGATGTG+AGG 0.573831 4_3:+55855171 Msa0649240:CDS
TCAGACTCAGGAAAAGATGC+TGG 0.574696 4_3:+55856416 Msa0649240:CDS
AATAGTTTACCATGAGGAGA+AGG 0.575180 4_3:-55857973 None:intergenic
ATGTTTGTAACTTTGTGGCA+TGG 0.575310 4_3:+55858566 Msa0649240:three_prime_UTR
ACCCTTATTCTGACAATGAA+GGG 0.575663 4_3:+55858480 Msa0649240:CDS
CTTCGATTGATGCTCAGTTG+AGG 0.580081 4_3:+55851773 Msa0649240:CDS
TGATGTGAAGCAGCCACTAA+GGG 0.581438 4_3:+55856271 Msa0649240:CDS
AAAGCATCAAAGACTTCAAG+AGG 0.582260 4_3:-55853243 None:intergenic
GAATGCTATAACAAACCACT+TGG 0.583481 4_3:+55856010 Msa0649240:CDS
GAAGTCTTCTTGATTTCTTG+CGG 0.587199 4_3:+55855913 Msa0649240:CDS
GATTAAGTTATTAAAGAAGG+GGG 0.587980 4_3:+55853137 Msa0649240:CDS
ACATCTGCAAAATACAACAT+AGG 0.588803 4_3:-55858605 None:intergenic
ATAAGGGTATCCTCCAAACC+AGG 0.589191 4_3:-55858465 None:intergenic
AGAATCCCCAGCATCAAGAC+CGG 0.589969 4_3:-55853034 None:intergenic
TGAAGAGAATTGAATAATAG+GGG 0.590100 4_3:-55854306 None:intergenic
CACCATCTCAACTAAGTCAA+GGG 0.593552 4_3:-55857840 None:intergenic
TCTACAGCAAGCACATCAGA+TGG 0.593636 4_3:-55856230 None:intergenic
TAAGCACCAAAGCTGTCTGA+AGG 0.593841 4_3:-55856185 None:intergenic
GAACTCGGGAACATGCTGAC+CGG 0.593857 4_3:+55853015 Msa0649240:CDS
TATTGAACAGTCATTTGGAG+AGG 0.595426 4_3:+55856640 Msa0649240:CDS
TCTGTACTTCTCTCAAATTG+AGG 0.596083 4_3:+55854669 Msa0649240:CDS
ACACCATCTCAACTAAGTCA+AGG 0.600414 4_3:-55857841 None:intergenic
ACCATTCTATAGAGAATAGG+CGG 0.600556 4_3:-55856349 None:intergenic
GTCTGATGATGATAAGCTTG+TGG 0.600718 4_3:+55851816 Msa0649240:CDS
GGAAGATCGGGGCCAAAGAG+AGG 0.600986 4_3:-55856107 None:intergenic
CCCGACAGTTACTAGCCGAT+GGG 0.601273 4_3:+55855222 Msa0649240:CDS
CTGATTACCATGTGAAGTTG+AGG 0.601477 4_3:+55858361 Msa0649240:CDS
GAAGATCGGGGCCAAAGAGA+GGG 0.602774 4_3:-55856106 None:intergenic
GCTGACCGGTCTTGATGCTG+GGG 0.603524 4_3:+55853029 Msa0649240:CDS
ATGCAGTCCTTGGACAAATG+TGG 0.604566 4_3:-55858384 None:intergenic
GAGCTCTGCAATACCTCAAG+AGG 0.604871 4_3:+55855244 Msa0649240:CDS
CACAAGTGAAAGCCCGAAGG+TGG 0.605272 4_3:-55855943 None:intergenic
GTTGAGGCCACATTTGTCCA+AGG 0.605540 4_3:+55858377 Msa0649240:CDS
TGGTACAGAAACCGTATCAA+CGG 0.605661 4_3:+55856368 Msa0649240:CDS
CAATTCTCTTCATGGATGGG+AGG 0.605900 4_3:+55854317 Msa0649240:CDS
CAAAGATCCAAGGGATAGCA+CGG 0.607034 4_3:-55857682 None:intergenic
ACAATGTTCCATGGAAGAGG+AGG 0.607364 4_3:+55856518 Msa0649240:CDS
TTAATAACTTAATCCTTCTG+CGG 0.611062 4_3:-55853128 None:intergenic
GACACCGCTCTGAAGAACAT+TGG 0.612346 4_3:+55854257 Msa0649240:CDS
ACATCCGTCAAGAATCAGAC+AGG 0.612394 4_3:+55855973 Msa0649240:CDS
CCATTCTATAGAGAATAGGC+GGG 0.612451 4_3:-55856348 None:intergenic
GATGGCTGTCATTGCAACAA+AGG 0.614061 4_3:+55856769 Msa0649240:CDS
CCACAAGACGAAATGAGGGC+AGG 0.614499 4_3:+55854176 Msa0649240:CDS
ACTGCTGCTACACTTGAGCA+TGG 0.615211 4_3:+55856695 Msa0649240:CDS
ACTGTTATGAGCTGTCTGCT+GGG 0.615569 4_3:+55852959 Msa0649240:CDS
TGACGAGGCTTTGCAAAGAG+AGG 0.616489 4_3:+55853505 Msa0649240:CDS
TAACTTCAGGAGTTACTCTG+GGG 0.623262 4_3:-55854606 None:intergenic
GCTGCTGGCATGCAGAACAC+TGG 0.624743 4_3:+55858507 Msa0649240:CDS
CTGCATGGAATCAAGCAACC+CGG 0.626686 4_3:+55858401 Msa0649240:CDS
GCGTACCCTCATGGATGAGA+TGG 0.627180 4_3:+55856751 Msa0649240:CDS
GTAGGCTTGCAAGACATTGA+GGG 0.628108 4_3:-55858316 None:intergenic
AGGTATTGCAGAGCTCCCAT+CGG 0.628979 4_3:-55855237 None:intergenic
TTTCATGAGACAATCTGGAA+AGG 0.631111 4_3:+55854209 Msa0649240:CDS
CAATGTTCCATGGAAGAGGA+GGG 0.631205 4_3:+55856519 Msa0649240:CDS
TCACATGGTAATCAGGATCA+CGG 0.633722 4_3:-55858353 None:intergenic
TGATGTATGAATCACGAAGA+CGG 0.635558 4_3:-55858290 None:intergenic
TGTTATTCTTGGTGATGTGA+GGG 0.638196 4_3:+55855172 Msa0649240:CDS
GAGTCCAGGCAAAGATCCAA+GGG 0.639201 4_3:-55857691 None:intergenic
GAGAATGGTCTGAGGAACGC+AGG 0.640650 4_3:+55856048 Msa0649240:CDS
TACACCACAAGACGAAATGA+GGG 0.641703 4_3:+55854172 Msa0649240:CDS
CAATAATCCTCAGAAGTTGG+AGG 0.642253 4_3:+55852993 Msa0649240:CDS
GGTATGGCTTGGCTTTGGAG+CGG 0.643119 4_3:+55857733 Msa0649240:CDS
GGTGATCAACCAATAGCTGA+TGG 0.643736 4_3:+55855891 Msa0649240:CDS
CCAGGAGCATAGTCACTCGT+AGG 0.645716 4_3:-55858447 None:intergenic
AGTAACTCCTGAAGTTACAA+GGG 0.646275 4_3:+55854612 Msa0649240:CDS
TATTCCAATGTTCTTCAGAG+CGG 0.650101 4_3:-55854261 None:intergenic
TCAAAACGAAAGCCAAGTGG+AGG 0.650753 4_3:+55857647 Msa0649240:CDS
AAGGAAGTTCAGCAATGACA+CGG 0.653952 4_3:-55856166 None:intergenic
ACTTCTGGCAGTTGTCCATG+TGG 0.655068 4_3:+55854808 Msa0649240:intron
AAGCATCAAAGACTTCAAGA+GGG 0.656351 4_3:-55853242 None:intergenic
GACAGCCATCTCATCCATGA+GGG 0.659814 4_3:-55856756 None:intergenic
CTGAAGTATTCAACAAAACG+AGG 0.664039 4_3:-55856818 None:intergenic
AGATAATATAGCAAGATGAG+TGG 0.666798 4_3:-55856564 None:intergenic
ACCACAGTTCATCTGACACT+AGG 0.667819 4_3:-55857907 None:intergenic
ACATTGAAGAGACCTTCAAG+AGG 0.670422 4_3:+55853196 Msa0649240:CDS
TGAGCTACGTATTCGTGCTG+AGG 0.670800 4_3:+55854842 Msa0649240:CDS
AGCATCAAAGACTTCAAGAG+GGG 0.675368 4_3:-55853241 None:intergenic
AAGCATGTGAGAGAATGACT+TGG 0.675389 4_3:-55853067 None:intergenic
ATAATATAGCAAGATGAGTG+GGG 0.676032 4_3:-55856562 None:intergenic
TGACAGCCATCTCATCCATG+AGG 0.676223 4_3:-55856757 None:intergenic
TTTCACAAGTGAAAGCCCGA+AGG 0.678001 4_3:-55855946 None:intergenic
TGATAAGCAGGAACTTGACG+AGG 0.689451 4_3:+55853490 Msa0649240:CDS
TATAGGTCATTGTGTGCATG+TGG 0.689708 4_3:+55855870 Msa0649240:CDS
GAGTATGGAAGAATGAACAT+TGG 0.689769 4_3:+55857614 Msa0649240:CDS
TCCTAGTGTCAGATGAACTG+TGG 0.691469 4_3:+55857906 Msa0649240:CDS
AATGTGGCCTCAACTTCACA+TGG 0.693710 4_3:-55858368 None:intergenic
ATCTTATCGAGAATGGTCTG+AGG 0.695701 4_3:+55856040 Msa0649240:CDS
GATAAGATCCAATCTCCAAG+TGG 0.700718 4_3:-55856025 None:intergenic
GATCTGCGAACAGACTGGGT+AGG 0.701911 4_3:-55853303 None:intergenic
TTTGTGAAGATAGCCTCTTG+AGG 0.704026 4_3:-55855257 None:intergenic
TGGATGGGAGGAGATCGTGA+TGG 0.708625 4_3:+55854329 Msa0649240:CDS
CCGTCAAAACGAAAGCCAAG+TGG 0.709520 4_3:+55857644 Msa0649240:CDS
TGGCTGTTGTCTGAGCTCAG+TGG 0.716988 4_3:+55856077 Msa0649240:CDS
TCTTCAGAGCGGTGTCAATG+CGG 0.718451 4_3:-55854250 None:intergenic
TGTTTGCCAAGGGAGACCCA+GGG 0.723712 4_3:+55857861 Msa0649240:CDS
GAGCCATGAATAGTATCTGG+TGG 0.761934 4_3:-55856590 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTATTATTTTTTATCTG+GGG + chr4_3:55852179-55852198 Msa0649240:intron 10.0%
!!! GATATAAAAAAAAATTTGTT+TGG + chr4_3:55852526-55852545 Msa0649240:intron 10.0%
!!! AAGTCATTATTTTATTTTTT+TGG + chr4_3:55854719-55854738 Msa0649240:intron 10.0%
!!! TCATTTTACGTTTTTTTTTT+TGG + chr4_3:55851942-55851961 Msa0649240:intron 15.0%
!! ATTTCACAAAAAAACAAAAA+GGG - chr4_3:55852117-55852136 None:intergenic 15.0%
!! AATTTCACAAAAAAACAAAA+AGG - chr4_3:55852118-55852137 None:intergenic 15.0%
!!! ATTTTAAATCTTTTTAGTCA+TGG + chr4_3:55852135-55852154 Msa0649240:intron 15.0%
!!! TGATTTTCTCAAATTATTAA+CGG + chr4_3:55852281-55852300 Msa0649240:intron 15.0%
!!! TAAAAAAAAATTTGTTTGGT+TGG + chr4_3:55852530-55852549 Msa0649240:intron 15.0%
!!! AAGTTATAAATTATTTTCCT+TGG + chr4_3:55853719-55853738 Msa0649240:intron 15.0%
!!! GAGTCATAAAATTTTAATTT+TGG - chr4_3:55853908-55853927 None:intergenic 15.0%
!! CTTAATAATATTATAATCCT+CGG + chr4_3:55854029-55854048 Msa0649240:intron 15.0%
!!! TCATAAATCAAGTATATTTT+TGG + chr4_3:55854395-55854414 Msa0649240:intron 15.0%
!! TAAATATGATTAATAATGAC+CGG - chr4_3:55854754-55854773 None:intergenic 15.0%
!!! TTGAACATTTTCATTTATAA+AGG + chr4_3:55855337-55855356 Msa0649240:intron 15.0%
!!! ACCAAAATTAATAATCTTTT+AGG + chr4_3:55856934-55856953 Msa0649240:intron 15.0%
!!! TTTTTATCTTCTTTTAAAAC+TGG - chr4_3:55857026-55857045 None:intergenic 15.0%
!! AAATAAGAAAAGAAATTTCA+AGG - chr4_3:55857522-55857541 None:intergenic 15.0%
!!! TTTTTTATCGCATTTTTATT+TGG + chr4_3:55858028-55858047 Msa0649240:intron 15.0%
!!! TTTTTTATTTCATTCATCAT+TGG + chr4_3:55858073-55858092 Msa0649240:intron 15.0%
!! AAGATTTATAGAAATACATT+AGG - chr4_3:55858208-55858227 None:intergenic 15.0%
!! AAAAATCTGGTATTATTATA+CGG - chr4_3:55858666-55858685 None:intergenic 15.0%
!!! AAAAATATTTCGAAGGTATT+CGG + chr4_3:55851505-55851524 Msa0649240:five_prime_UTR 20.0%
!! AAATAAAAAATACCGTTTCT+CGG - chr4_3:55851906-55851925 None:intergenic 20.0%
!! CATTACATAAAATTGAAGTA+GGG - chr4_3:55852030-55852049 None:intergenic 20.0%
!! TCATTACATAAAATTGAAGT+AGG - chr4_3:55852031-55852050 None:intergenic 20.0%
!! TTTCACAAAAAAACAAAAAG+GGG - chr4_3:55852116-55852135 None:intergenic 20.0%
!! TTTAAATATTCATTCCATTG+AGG - chr4_3:55852356-55852375 None:intergenic 20.0%
!! AGTTTAAAAAAACAACACAA+CGG - chr4_3:55852724-55852743 None:intergenic 20.0%
!! ATATCAAATCTAATTCTTCA+TGG + chr4_3:55852832-55852851 Msa0649240:intron 20.0%
!!! TAGTTTCATTAATTTGATGT+TGG + chr4_3:55852925-55852944 Msa0649240:intron 20.0%
!! AAGGATTAAGTTATTAAAGA+AGG + chr4_3:55853134-55853153 Msa0649240:CDS 20.0%
!! AGGATTAAGTTATTAAAGAA+GGG + chr4_3:55853135-55853154 Msa0649240:CDS 20.0%
!!! TGTCTTTTTATTTTCTTTTC+AGG + chr4_3:55853420-55853439 Msa0649240:intron 20.0%
!!! GTCTTTTTATTTTCTTTTCA+GGG + chr4_3:55853421-55853440 Msa0649240:intron 20.0%
!!! TGTGTTTTTTTTTTTTTGAG+AGG + chr4_3:55853767-55853786 Msa0649240:intron 20.0%
!! TATTTGTACAAATCAAAGTA+TGG + chr4_3:55853971-55853990 Msa0649240:intron 20.0%
!! ATGAAGAGAATTGAATAATA+GGG - chr4_3:55854310-55854329 None:intergenic 20.0%
!!! TTTTGGTCAAAGTATTTATT+TGG + chr4_3:55854412-55854431 Msa0649240:intron 20.0%
!!! AATTCTATCATATTCAGTTT+TGG + chr4_3:55854509-55854528 Msa0649240:intron 20.0%
!!! TCTTTTTAAAAATATGAAGC+TGG + chr4_3:55855582-55855601 Msa0649240:intron 20.0%
!!! CTTTTTAAAAATATGAAGCT+GGG + chr4_3:55855583-55855602 Msa0649240:intron 20.0%
!! TTAAAATGCTAGAATTTCAA+CGG - chr4_3:55856903-55856922 None:intergenic 20.0%
!!! GCCTAAAAGATTATTAATTT+TGG - chr4_3:55856938-55856957 None:intergenic 20.0%
!!! AGTTTTGAAAATTTTAAGTC+CGG + chr4_3:55856977-55856996 Msa0649240:intron 20.0%
!! AAAAAAAACTTAAAGTTTCC+TGG + chr4_3:55857047-55857066 Msa0649240:intron 20.0%
!! AAAAAAACTTAAAGTTTCCT+GGG + chr4_3:55857048-55857067 Msa0649240:intron 20.0%
!! AAAAAAACTTAATAGTTTCC+TGG + chr4_3:55857145-55857164 Msa0649240:intron 20.0%
!! AAAAAACTTAATAGTTTCCT+GGG + chr4_3:55857146-55857165 Msa0649240:intron 20.0%
!! ATATACATCTTTAATACACT+TGG + chr4_3:55857336-55857355 Msa0649240:intron 20.0%
!! AGTTTGCAATTAATAAAGTA+AGG - chr4_3:55857575-55857594 None:intergenic 20.0%
!! TAAAATAATAGTTTACCATG+AGG - chr4_3:55857982-55858001 None:intergenic 20.0%
!!! TTCTATAAATCTTTGTTTGT+AGG + chr4_3:55858215-55858234 Msa0649240:intron 20.0%
!!! AAAATATTTCGAAGGTATTC+GGG + chr4_3:55851506-55851525 Msa0649240:five_prime_UTR 25.0%
! AAATTCTATGATACTTTGCA+AGG - chr4_3:55851632-55851651 None:intergenic 25.0%
! AGTATCATAGAATTTGATCA+AGG + chr4_3:55851637-55851656 Msa0649240:intron 25.0%
! GTAATGATGATAAAGCTTAA+AGG + chr4_3:55852044-55852063 Msa0649240:intron 25.0%
!!! GTTGTGTTGTTTTTTTAAAC+TGG + chr4_3:55852723-55852742 Msa0649240:intron 25.0%
! TTAATAACTTAATCCTTCTG+CGG - chr4_3:55853131-55853150 None:intergenic 25.0%
! GGATTAAGTTATTAAAGAAG+GGG + chr4_3:55853136-55853155 Msa0649240:CDS 25.0%
! GATTAAGTTATTAAAGAAGG+GGG + chr4_3:55853137-55853156 Msa0649240:CDS 25.0%
! ATCAAGAAAAATCAGAAGTT+AGG - chr4_3:55853533-55853552 None:intergenic 25.0%
! ATACAACTTATACAATCATG+TGG - chr4_3:55853588-55853607 None:intergenic 25.0%
! ATACATAAACATCATGATTG+AGG + chr4_3:55853631-55853650 Msa0649240:intron 25.0%
!! TATAAATTATTTTCCTTGGC+TGG + chr4_3:55853723-55853742 Msa0649240:intron 25.0%
!! ATAAATTATTTTCCTTGGCT+GGG + chr4_3:55853724-55853743 Msa0649240:intron 25.0%
! AAAATAAATAATTTGGACCG+AGG - chr4_3:55854049-55854068 None:intergenic 25.0%
! TGAAGAGAATTGAATAATAG+GGG - chr4_3:55854309-55854328 None:intergenic 25.0%
! CATGAAGAGAATTGAATAAT+AGG - chr4_3:55854311-55854330 None:intergenic 25.0%
! CTATTATTCAATTCTCTTCA+TGG + chr4_3:55854309-55854328 Msa0649240:CDS 25.0%
! CATTAGACAAATATTATGAC+AGG - chr4_3:55854572-55854591 None:intergenic 25.0%
! AGAGATGCAAAACATTATAT+TGG + chr4_3:55854885-55854904 Msa0649240:CDS 25.0%
!! TTACTTATCAAAGCATCAAA+AGG - chr4_3:55855073-55855092 None:intergenic 25.0%
!! TAATGTCTTTTCTGAATTTG+TGG - chr4_3:55855729-55855748 None:intergenic 25.0%
!!! TCAGCAAGTTTTTCAAATAA+TGG - chr4_3:55856302-55856321 None:intergenic 25.0%
! CACAAAATAGAAAAATGTTC+CGG - chr4_3:55856999-55857018 None:intergenic 25.0%
! TAAACAACAATAATTTCCAC+AGG - chr4_3:55857423-55857442 None:intergenic 25.0%
!!! CATTAGTTTTGTGATGTAAA+AGG - chr4_3:55857498-55857517 None:intergenic 25.0%
! TTCGAGATATGTATAATCAA+TGG + chr4_3:55857801-55857820 Msa0649240:CDS 25.0%
!! CGTATATTTTCAACTTTACA+TGG - chr4_3:55858121-55858140 None:intergenic 25.0%
! AAAAAGTGAAATATTCTGCA+AGG - chr4_3:55858183-55858202 None:intergenic 25.0%
! GTTACAAACATTGTATACAT+AGG - chr4_3:55858557-55858576 None:intergenic 25.0%
! ATACAATGTTTGTAACTTTG+TGG + chr4_3:55858561-55858580 Msa0649240:three_prime_UTR 25.0%
!! AAAAAAGTACCTCAAAGTAG+CGG - chr4_3:55851571-55851590 None:intergenic 30.0%
AGTCATGGAAGATTGTAATT+TGG + chr4_3:55852150-55852169 Msa0649240:intron 30.0%
AAAATCACATGATTCAGTGT+CGG - chr4_3:55852268-55852287 None:intergenic 30.0%
TCTCAAATTATTAACGGTGT+CGG + chr4_3:55852287-55852306 Msa0649240:intron 30.0%
! ATTATGTTTGATAGTCCCTT+AGG + chr4_3:55852376-55852395 Msa0649240:intron 30.0%
!!! GTTAGGCTTGAAATTTTTTG+TGG + chr4_3:55852426-55852445 Msa0649240:intron 30.0%
ATCTCAAGTTCTTTGAATCT+GGG - chr4_3:55852455-55852474 None:intergenic 30.0%
TACATAAAACACACGATTCA+AGG - chr4_3:55852572-55852591 None:intergenic 30.0%
CGTAGTTCTTTGTAATTTCA+AGG - chr4_3:55852622-55852641 None:intergenic 30.0%
!!! ACTTTTAGCTCAAAACACAA+AGG - chr4_3:55852779-55852798 None:intergenic 30.0%
!! GTGTTTTGAGCTAAAAGTTA+AGG + chr4_3:55852781-55852800 Msa0649240:intron 30.0%
! TGAGCTAAAAGTTAAGGTTT+TGG + chr4_3:55852787-55852806 Msa0649240:intron 30.0%
! TCATTAATTTGATGTTGGCT+AGG + chr4_3:55852930-55852949 Msa0649240:intron 30.0%
! TTATTAAAGAAGGGGGATTT+TGG + chr4_3:55853144-55853163 Msa0649240:CDS 30.0%
TTAAGACCAAATCAACAGTT+TGG - chr4_3:55853275-55853294 None:intergenic 30.0%
!! TTTATTTTCTTTTCAGGGTC+AGG + chr4_3:55853426-55853445 Msa0649240:intron 30.0%
!! TTATTTTCTTTTCAGGGTCA+GGG + chr4_3:55853427-55853446 Msa0649240:intron 30.0%
AAACTACTTTGAATGTTCAC+GGG - chr4_3:55853667-55853686 None:intergenic 30.0%
GAAACTACTTTGAATGTTCA+CGG - chr4_3:55853668-55853687 None:intergenic 30.0%
GAACATTCAAAGTAGTTTCA+AGG + chr4_3:55853669-55853688 Msa0649240:intron 30.0%
AGTTTCAAGGAGTTTAGATA+TGG + chr4_3:55853682-55853701 Msa0649240:intron 30.0%
TAAGATATTGCACTACTTGA+AGG - chr4_3:55854013-55854032 None:intergenic 30.0%
!! GAATAATAGGGGCATTATAT+GGG - chr4_3:55854298-55854317 None:intergenic 30.0%
!! TGAATAATAGGGGCATTATA+TGG - chr4_3:55854299-55854318 None:intergenic 30.0%
TATTCAATTCTCTTCATGGA+TGG + chr4_3:55854313-55854332 Msa0649240:CDS 30.0%
ATTCAATTCTCTTCATGGAT+GGG + chr4_3:55854314-55854333 Msa0649240:CDS 30.0%
TATCCACTCATTATTTGCTT+CGG - chr4_3:55854369-55854388 None:intergenic 30.0%
! TCCCTCATATTTTCTTCATT+CGG + chr4_3:55854471-55854490 Msa0649240:intron 30.0%
ACCGAATGAAGAAAATATGA+GGG - chr4_3:55854475-55854494 None:intergenic 30.0%
AACCGAATGAAGAAAATATG+AGG - chr4_3:55854476-55854495 None:intergenic 30.0%
!!! ATTTTTTTGGTCAAGTATGC+CGG + chr4_3:55854732-55854751 Msa0649240:intron 30.0%
TATCTTCACAAATGTTGAAC+AGG + chr4_3:55855268-55855287 Msa0649240:CDS 30.0%
ATGTTCAACTATTTGTACTG+TGG - chr4_3:55855325-55855344 None:intergenic 30.0%
TTATCCAACAATTCACTTCA+AGG - chr4_3:55855369-55855388 None:intergenic 30.0%
AACGAAAGAACTCAAGAAAA+TGG - chr4_3:55855448-55855467 None:intergenic 30.0%
AAGAGGTGAAACAATTTCTA+GGG - chr4_3:55855506-55855525 None:intergenic 30.0%
ATTGTTTCACCTCTTGATTA+TGG + chr4_3:55855511-55855530 Msa0649240:intron 30.0%
TTGTTTCACCTCTTGATTAT+GGG + chr4_3:55855512-55855531 Msa0649240:intron 30.0%
TGATTATGGGAACATTAGTT+TGG + chr4_3:55855525-55855544 Msa0649240:intron 30.0%
TTATCTAGTGCTTCTTAATC+TGG + chr4_3:55855559-55855578 Msa0649240:intron 30.0%
AAAAGACATTACCAAATGCA+TGG + chr4_3:55855738-55855757 Msa0649240:intron 30.0%
CCAAGAACTACATGAAAAAT+TGG - chr4_3:55855833-55855852 None:intergenic 30.0%
! CCAATTTTTCATGTAGTTCT+TGG + chr4_3:55855830-55855849 Msa0649240:intron 30.0%
!!! TTCTTCAGTTTTAGGAAGAT+CGG - chr4_3:55856123-55856142 None:intergenic 30.0%
! TCAGCAATTTCTTCAGTTTT+AGG - chr4_3:55856131-55856150 None:intergenic 30.0%
TGGTGCTTATATCATTTCAA+TGG + chr4_3:55856199-55856218 Msa0649240:CDS 30.0%
TGTACCATTCTATAGAGAAT+AGG - chr4_3:55856355-55856374 None:intergenic 30.0%
GGAAAACAAGAAGTTATGAT+AGG + chr4_3:55856389-55856408 Msa0649240:CDS 30.0%
ATAATATAGCAAGATGAGTG+GGG - chr4_3:55856565-55856584 None:intergenic 30.0%
GATAATATAGCAAGATGAGT+GGG - chr4_3:55856566-55856585 None:intergenic 30.0%
AGATAATATAGCAAGATGAG+TGG - chr4_3:55856567-55856586 None:intergenic 30.0%
GAAGTTATTGAACAGTCATT+TGG + chr4_3:55856635-55856654 Msa0649240:CDS 30.0%
!! TAATCTTTTAGGCATTGTTC+AGG + chr4_3:55856945-55856964 Msa0649240:intron 30.0%
! CGGAACATTTTTCTATTTTG+TGG + chr4_3:55856997-55857016 Msa0649240:intron 30.0%
CAAAATCAAAAATGTTGAGG+CGG - chr4_3:55857101-55857120 None:intergenic 30.0%
CCACAAAATCAAAAATGTTG+AGG - chr4_3:55857104-55857123 None:intergenic 30.0%
!!! CCTCAACATTTTTGATTTTG+TGG + chr4_3:55857101-55857120 Msa0649240:intron 30.0%
AAACTAAAAACTCAATCACC+CGG + chr4_3:55857239-55857258 Msa0649240:intron 30.0%
CTTTATTAATTGCAAACTGC+AGG + chr4_3:55857577-55857596 Msa0649240:intron 30.0%
ATTCAAGCATGTAATTGAGA+AGG + chr4_3:55857757-55857776 Msa0649240:CDS 30.0%
! TATACATATCTCGAAGCATT+TGG - chr4_3:55857796-55857815 None:intergenic 30.0%
CGATAAAAAAAATCCCTAAG+AGG - chr4_3:55858018-55858037 None:intergenic 30.0%
ACATCTGCAAAATACAACAT+AGG - chr4_3:55858608-55858627 None:intergenic 30.0%
CTATGATACTTTGCAAGGAA+AGG - chr4_3:55851627-55851646 None:intergenic 35.0%
AGAGTGAGAAAATGACAAGT+AGG + chr4_3:55851734-55851753 Msa0649240:exon 35.0%
TCGTTTCCTTGATATTCTTC+AGG + chr4_3:55851861-55851880 Msa0649240:CDS 35.0%
GCAAATCCTGAAGAATATCA+AGG - chr4_3:55851870-55851889 None:intergenic 35.0%
GATATTCTTCAGGATTTGCA+TGG + chr4_3:55851871-55851890 Msa0649240:CDS 35.0%
TACTTTATCCCTATGAAGCA+CGG + chr4_3:55852211-55852230 Msa0649240:intron 35.0%
TCAGCATTGTCAATTGATCT+AGG - chr4_3:55852402-55852421 None:intergenic 35.0%
TTGACAATGCTGAGATTGTT+AGG + chr4_3:55852409-55852428 Msa0649240:intron 35.0%
GATCTCAAGTTCTTTGAATC+TGG - chr4_3:55852456-55852475 None:intergenic 35.0%
CTTAAAACTCACACACACAA+AGG - chr4_3:55852482-55852501 None:intergenic 35.0%
! CTTTGTGTGTGTGAGTTTTA+AGG + chr4_3:55852480-55852499 Msa0649240:intron 35.0%
AAAACAACACAACGGCAATT+TGG - chr4_3:55852716-55852735 None:intergenic 35.0%
GGTGAAATAGATTCATGCTT+CGG + chr4_3:55852808-55852827 Msa0649240:intron 35.0%
GAACAATAATCCTCAGAAGT+TGG + chr4_3:55852990-55853009 Msa0649240:CDS 35.0%
ATTCTCTCACATGCTTAACT+TGG + chr4_3:55853074-55853093 Msa0649240:CDS 35.0%
TTGAACTTCTTCTGCCAAAT+TGG - chr4_3:55853100-55853119 None:intergenic 35.0%
AAGCATCAAAGACTTCAAGA+GGG - chr4_3:55853245-55853264 None:intergenic 35.0%
! AAAGCATCAAAGACTTCAAG+AGG - chr4_3:55853246-55853265 None:intergenic 35.0%
TATTACACCAGATGATAAGC+AGG + chr4_3:55853478-55853497 Msa0649240:CDS 35.0%
AATCATGTGGTTGTCAATGA+TGG - chr4_3:55853575-55853594 None:intergenic 35.0%
TCAATGCTATCTGTGCTAAT+AGG - chr4_3:55853813-55853832 None:intergenic 35.0%
TTTATATGGCAAACCTTGTG+TGG + chr4_3:55854072-55854091 Msa0649240:intron 35.0%
AGGAGTTCTTCGAATTTCAT+CGG - chr4_3:55854150-55854169 None:intergenic 35.0%
TTTCATGAGACAATCTGGAA+AGG + chr4_3:55854209-55854228 Msa0649240:CDS 35.0%
TATTCCAATGTTCTTCAGAG+CGG - chr4_3:55854264-55854283 None:intergenic 35.0%
AGTAACTCCTGAAGTTACAA+GGG + chr4_3:55854612-55854631 Msa0649240:CDS 35.0%
TCTGTACTTCTCTCAAATTG+AGG + chr4_3:55854669-55854688 Msa0649240:CDS 35.0%
AATTGAGGATCTCATGTTTG+AGG + chr4_3:55854684-55854703 Msa0649240:CDS 35.0%
GAAGTAGACAATAAGCAAGA+TGG - chr4_3:55854793-55854812 None:intergenic 35.0%
TCTTGCTTATTGTCTACTTC+TGG + chr4_3:55854793-55854812 Msa0649240:intron 35.0%
TCACCAAGAATAACACGATA+TGG - chr4_3:55855167-55855186 None:intergenic 35.0%
!! TGTTATTCTTGGTGATGTGA+GGG + chr4_3:55855172-55855191 Msa0649240:CDS 35.0%
! TAGGTTATTTGGCAGTTTTG+AGG - chr4_3:55855300-55855319 None:intergenic 35.0%
AACTATTTGTACTGTGGCAT+AGG - chr4_3:55855319-55855338 None:intergenic 35.0%
ACTTCCTTGAAGTGAATTGT+TGG + chr4_3:55855362-55855381 Msa0649240:intron 35.0%
CAAGAGGTGAAACAATTTCT+AGG - chr4_3:55855507-55855526 None:intergenic 35.0%
CTAATGTTCCCATAATCAAG+AGG - chr4_3:55855523-55855542 None:intergenic 35.0%
! TGATTTTCAAACTGCTTGGA+AGG + chr4_3:55855606-55855625 Msa0649240:intron 35.0%
CTTAGAGTTGACAACATTGT+TGG - chr4_3:55855670-55855689 None:intergenic 35.0%
ATAATCTCATGCCATGCATT+TGG - chr4_3:55855752-55855771 None:intergenic 35.0%
GAAGTCTTCTTGATTTCTTG+CGG + chr4_3:55855913-55855932 Msa0649240:CDS 35.0%
GAATGCTATAACAAACCACT+TGG + chr4_3:55856010-55856029 Msa0649240:CDS 35.0%
ATAACAAACCACTTGGAGAT+TGG + chr4_3:55856017-55856036 Msa0649240:CDS 35.0%
AGATTGGATCTTATCGAGAA+TGG + chr4_3:55856033-55856052 Msa0649240:CDS 35.0%
!!! TCTTCAGTTTTAGGAAGATC+GGG - chr4_3:55856122-55856141 None:intergenic 35.0%
!! TGAAAAACTTGCTGATCTTG+AGG + chr4_3:55856307-55856326 Msa0649240:CDS 35.0%
ACCATTCTATAGAGAATAGG+CGG - chr4_3:55856352-55856371 None:intergenic 35.0%
!!! CTTCTTGTTTTCCGTTGATA+CGG - chr4_3:55856382-55856401 None:intergenic 35.0%
GGCTCAAGAAGAACTTATAA+AGG + chr4_3:55856469-55856488 Msa0649240:CDS 35.0%
GTTAAGCTTACAATGTTCCA+TGG + chr4_3:55856509-55856528 Msa0649240:CDS 35.0%
ATACTATTCATGGCTCACTT+CGG + chr4_3:55856597-55856616 Msa0649240:CDS 35.0%
TATTGAACAGTCATTTGGAG+AGG + chr4_3:55856640-55856659 Msa0649240:CDS 35.0%
! CTGAAGTATTCAACAAAACG+AGG - chr4_3:55856821-55856840 None:intergenic 35.0%
CATTAACTGAAGGAATGTTC+TGG - chr4_3:55857267-55857286 None:intergenic 35.0%
TGAAAGCTTGCATTAACTGA+AGG - chr4_3:55857277-55857296 None:intergenic 35.0%
GAGTATGGAAGAATGAACAT+TGG + chr4_3:55857614-55857633 Msa0649240:CDS 35.0%
ATAATCAATGGCCATTCTTC+AGG + chr4_3:55857813-55857832 Msa0649240:CDS 35.0%
TAATCAATGGCCATTCTTCA+GGG + chr4_3:55857814-55857833 Msa0649240:CDS 35.0%
AATAGTTTACCATGAGGAGA+AGG - chr4_3:55857976-55857995 None:intergenic 35.0%
!!! ATTGCTGCTATTTTCCTCTT+AGG + chr4_3:55858001-55858020 Msa0649240:intron 35.0%
!!! TTGCTGCTATTTTCCTCTTA+GGG + chr4_3:55858002-55858021 Msa0649240:intron 35.0%
!! TTTTATTTGGCTGCTGTACA+TGG + chr4_3:55858041-55858060 Msa0649240:intron 35.0%
! AATCTTTGTTTGTAGGTTGC+TGG + chr4_3:55858222-55858241 Msa0649240:intron 35.0%
TGATGTATGAATCACGAAGA+CGG - chr4_3:55858293-55858312 None:intergenic 35.0%
TACCCTTATTCTGACAATGA+AGG + chr4_3:55858479-55858498 Msa0649240:CDS 35.0%
ACCCTTATTCTGACAATGAA+GGG + chr4_3:55858480-55858499 Msa0649240:CDS 35.0%
ACCCTTCATTGTCAGAATAA+GGG - chr4_3:55858484-55858503 None:intergenic 35.0%
TACCCTTCATTGTCAGAATA+AGG - chr4_3:55858485-55858504 None:intergenic 35.0%
ATGTTTGTAACTTTGTGGCA+TGG + chr4_3:55858566-55858585 Msa0649240:three_prime_UTR 35.0%
TGTTTGTAACTTTGTGGCAT+GGG + chr4_3:55858567-55858586 Msa0649240:three_prime_UTR 35.0%
AAGTAGGAAGCTAGAGAAGA+TGG + chr4_3:55851750-55851769 Msa0649240:CDS 40.0%
TCATCATCAGACACCTTACT+AGG - chr4_3:55851808-55851827 None:intergenic 40.0%
! GTCTGATGATGATAAGCTTG+TGG + chr4_3:55851816-55851835 Msa0649240:CDS 40.0%
ATACCGTTTCTCGGATATCA+TGG - chr4_3:55851897-55851916 None:intergenic 40.0%
CTTCATAGCTGTATCCTCAA+TGG + chr4_3:55852339-55852358 Msa0649240:intron 40.0%
GTCAATTGATCTAGGCCTAA+GGG - chr4_3:55852394-55852413 None:intergenic 40.0%
TGTCAATTGATCTAGGCCTA+AGG - chr4_3:55852395-55852414 None:intergenic 40.0%
!!! TGTGTGTGTGAGTTTTAAGG+TGG + chr4_3:55852483-55852502 Msa0649240:intron 40.0%
AAACTGAGAAGAGACAGTTG+TGG - chr4_3:55852753-55852772 None:intergenic 40.0%
CAATAATCCTCAGAAGTTGG+AGG + chr4_3:55852993-55853012 Msa0649240:CDS 40.0%
AAGCATGTGAGAGAATGACT+TGG - chr4_3:55853070-55853089 None:intergenic 40.0%
! CATGCTTAACTTGGCCAATT+TGG + chr4_3:55853083-55853102 Msa0649240:CDS 40.0%
TAACTTAATCCTTCTGCGGT+AGG - chr4_3:55853127-55853146 None:intergenic 40.0%
TTCAATGTCTGACTCAGTGA+TGG - chr4_3:55853184-55853203 None:intergenic 40.0%
ACATTGAAGAGACCTTCAAG+AGG + chr4_3:55853196-55853215 Msa0649240:CDS 40.0%
TTGATTCACAAGCCTCTTGA+AGG - chr4_3:55853211-55853230 None:intergenic 40.0%
AGCATCAAAGACTTCAAGAG+GGG - chr4_3:55853244-55853263 None:intergenic 40.0%
! GAAGAGCCAAACTGTTGATT+TGG + chr4_3:55853266-55853285 Msa0649240:CDS 40.0%
AGATCTTTGTTGCAGAAGCA+CGG + chr4_3:55853321-55853340 Msa0649240:CDS 40.0%
TCAAGTTCCTGCTTATCATC+TGG - chr4_3:55853488-55853507 None:intergenic 40.0%
ATGCTACTACACTCATTGCA+TGG + chr4_3:55853845-55853864 Msa0649240:intron 40.0%
!! AGCATTTGGTGCATCATCTT+TGG + chr4_3:55853936-55853955 Msa0649240:intron 40.0%
!! GCATTTGGTGCATCATCTTT+GGG + chr4_3:55853937-55853956 Msa0649240:intron 40.0%
TAAGACCTTATCACCACACA+AGG - chr4_3:55854088-55854107 None:intergenic 40.0%
TACACCACAAGACGAAATGA+GGG + chr4_3:55854172-55854191 Msa0649240:CDS 40.0%
! GCTACTTTCATGAGACAATC+TGG + chr4_3:55854204-55854223 Msa0649240:CDS 40.0%
! TCAATGCGGCGCAAAAATTT+TGG - chr4_3:55854239-55854258 None:intergenic 40.0%
TCTCCGAAGCAAATAATGAG+TGG + chr4_3:55854363-55854382 Msa0649240:intron 40.0%
ATATGAGGGATCAGAGATCT+AGG - chr4_3:55854461-55854480 None:intergenic 40.0%
ATTTGTCTAATGCGCATTGC+AGG + chr4_3:55854580-55854599 Msa0649240:intron 40.0%
TAACTTCAGGAGTTACTCTG+GGG - chr4_3:55854609-55854628 None:intergenic 40.0%
GTAACTTCAGGAGTTACTCT+GGG - chr4_3:55854610-55854629 None:intergenic 40.0%
TGTAACTTCAGGAGTTACTC+TGG - chr4_3:55854611-55854630 None:intergenic 40.0%
GAGTAACTCCTGAAGTTACA+AGG + chr4_3:55854611-55854630 Msa0649240:CDS 40.0%
! TCTTCATTGCTGCAGAGTTT+TGG + chr4_3:55855120-55855139 Msa0649240:intron 40.0%
ATAACACGATATGGCTCAGT+TGG - chr4_3:55855158-55855177 None:intergenic 40.0%
! GAGCCATATCGTGTTATTCT+TGG + chr4_3:55855161-55855180 Msa0649240:CDS 40.0%
!! GTGTTATTCTTGGTGATGTG+AGG + chr4_3:55855171-55855190 Msa0649240:CDS 40.0%
TTTGTGAAGATAGCCTCTTG+AGG - chr4_3:55855260-55855279 None:intergenic 40.0%
GTACTGTGGCATAGGTTATT+TGG - chr4_3:55855311-55855330 None:intergenic 40.0%
! GGTGAAACAATTTCTAGGGA+TGG - chr4_3:55855502-55855521 None:intergenic 40.0%
! TGGGTGATTTTCAAACTGCT+TGG + chr4_3:55855602-55855621 Msa0649240:intron 40.0%
TTCTGAATTTGTGGAGTCGA+TGG - chr4_3:55855720-55855739 None:intergenic 40.0%
AGCCTCTTGAACTATGCTAT+AGG + chr4_3:55855853-55855872 Msa0649240:CDS 40.0%
GACCTATAGCATAGTTCAAG+AGG - chr4_3:55855858-55855877 None:intergenic 40.0%
TATAGGTCATTGTGTGCATG+TGG + chr4_3:55855870-55855889 Msa0649240:CDS 40.0%
AGAAGACTTCCATCAGCTAT+TGG - chr4_3:55855903-55855922 None:intergenic 40.0%
GATAAGATCCAATCTCCAAG+TGG - chr4_3:55856028-55856047 None:intergenic 40.0%
ATCTTATCGAGAATGGTCTG+AGG + chr4_3:55856040-55856059 Msa0649240:CDS 40.0%
!!! CTTCAGTTTTAGGAAGATCG+GGG - chr4_3:55856121-55856140 None:intergenic 40.0%
TGAAGAAATTGCTGATGTGC+TGG + chr4_3:55856136-55856155 Msa0649240:CDS 40.0%
AAGGAAGTTCAGCAATGACA+CGG - chr4_3:55856169-55856188 None:intergenic 40.0%
! AATAATGGAACGACCCTTAG+TGG - chr4_3:55856287-55856306 None:intergenic 40.0%
CCATTCTATAGAGAATAGGC+GGG - chr4_3:55856351-55856370 None:intergenic 40.0%
TGGTACAGAAACCGTATCAA+CGG + chr4_3:55856368-55856387 Msa0649240:CDS 40.0%
ATGATAGGATACTCAGACTC+AGG + chr4_3:55856404-55856423 Msa0649240:CDS 40.0%
CTTACAATGTTCCATGGAAG+AGG + chr4_3:55856515-55856534 Msa0649240:CDS 40.0%
AGTGAGCCATGAATAGTATC+TGG - chr4_3:55856596-55856615 None:intergenic 40.0%
TACTATTCATGGCTCACTTC+GGG + chr4_3:55856598-55856617 Msa0649240:CDS 40.0%
!! GTATCGCTCCATTGTTTTTC+TGG + chr4_3:55856793-55856812 Msa0649240:CDS 40.0%
ACGAGGTTCCAGAAAAACAA+TGG - chr4_3:55856804-55856823 None:intergenic 40.0%
!! CTTTTAGGCATTGTTCAGGT+TGG + chr4_3:55856949-55856968 Msa0649240:intron 40.0%
AATCAAAAATGTTGAGGCGG+TGG - chr4_3:55857098-55857117 None:intergenic 40.0%
!!! GGTGGAAATTTTTTCAGCAG+TGG - chr4_3:55857177-55857196 None:intergenic 40.0%
TTCATTCTTCTCTAGTCCTG+TGG + chr4_3:55857404-55857423 Msa0649240:intron 40.0%
ATTCTTCCATACTCCAACTC+AGG - chr4_3:55857608-55857627 None:intergenic 40.0%
AGTGATTCAATTCCTCCACT+TGG - chr4_3:55857662-55857681 None:intergenic 40.0%
TCAGACAAGGTTTCACTTAC+CGG + chr4_3:55857712-55857731 Msa0649240:CDS 40.0%
CACCATCTCAACTAAGTCAA+GGG - chr4_3:55857843-55857862 None:intergenic 40.0%
ACACCATCTCAACTAAGTCA+AGG - chr4_3:55857844-55857863 None:intergenic 40.0%
TCAGATGAACTGTGGTCATT+TGG + chr4_3:55857914-55857933 Msa0649240:CDS 40.0%
GGTCATTTGGAGAGAGATTA+AGG + chr4_3:55857927-55857946 Msa0649240:CDS 40.0%
GGACACAAAGATATCCTTGA+AGG + chr4_3:55858243-55858262 Msa0649240:CDS 40.0%
GGAGTCTTTGCTTCAAGTAA+GGG - chr4_3:55858272-55858291 None:intergenic 40.0%
TCACATGGTAATCAGGATCA+CGG - chr4_3:55858356-55858375 None:intergenic 40.0%
CTCAACTTCACATGGTAATC+AGG - chr4_3:55858363-55858382 None:intergenic 40.0%
CTGATTACCATGTGAAGTTG+AGG + chr4_3:55858361-55858380 Msa0649240:CDS 40.0%
GCGGCACAAACAAAAAGAGA+GGG - chr4_3:55851552-55851571 None:intergenic 45.0%
AGCGGCACAAACAAAAAGAG+AGG - chr4_3:55851553-55851572 None:intergenic 45.0%
! TTGTTTGTGCCGCTACTTTG+AGG + chr4_3:55851559-55851578 Msa0649240:five_prime_UTR 45.0%
CTTCGATTGATGCTCAGTTG+AGG + chr4_3:55851773-55851792 Msa0649240:CDS 45.0%
GAGGTTGTTAGCACCTAGTA+AGG + chr4_3:55851792-55851811 Msa0649240:CDS 45.0%
TGGCCATGATATCCGAGAAA+CGG + chr4_3:55851891-55851910 Msa0649240:CDS 45.0%
CAGACACAACACGTAATCCA+AGG - chr4_3:55852242-55852261 None:intergenic 45.0%
GAGGATACAGCTATGAAGCA+CGG - chr4_3:55852337-55852356 None:intergenic 45.0%
TTACTTCGCTGCTGCATACA+TGG + chr4_3:55852888-55852907 Msa0649240:intron 45.0%
TGCTGCATACATGGATTCTG+TGG + chr4_3:55852897-55852916 Msa0649240:intron 45.0%
AACTGTTATGAGCTGTCTGC+TGG + chr4_3:55852958-55852977 Msa0649240:CDS 45.0%
ACTGTTATGAGCTGTCTGCT+GGG + chr4_3:55852959-55852978 Msa0649240:CDS 45.0%
TTCAAATTGCCTACCGCAGA+AGG + chr4_3:55853115-55853134 Msa0649240:CDS 45.0%
CAAAGATCTGCGAACAGACT+GGG - chr4_3:55853310-55853329 None:intergenic 45.0%
ACAAAGATCTGCGAACAGAC+TGG - chr4_3:55853311-55853330 None:intergenic 45.0%
TGATAAGCAGGAACTTGACG+AGG + chr4_3:55853490-55853509 Msa0649240:CDS 45.0%
TGATTATTCAAGCCCAGCCA+AGG - chr4_3:55853739-55853758 None:intergenic 45.0%
CTACTACACTCATTGCATGG+CGG + chr4_3:55853848-55853867 Msa0649240:intron 45.0%
TGACTCTTCACGTGAGCATT+TGG + chr4_3:55853922-55853941 Msa0649240:intron 45.0%
GCAAACCTTGTGTGGTGATA+AGG + chr4_3:55854080-55854099 Msa0649240:intron 45.0%
GAAATGCAGCTTGAATCTGC+AGG - chr4_3:55854124-55854143 None:intergenic 45.0%
ATTTCGTCTTGTGGTGTAGG+AGG - chr4_3:55854170-55854189 None:intergenic 45.0%
CTCATTTCGTCTTGTGGTGT+AGG - chr4_3:55854173-55854192 None:intergenic 45.0%
CTACACCACAAGACGAAATG+AGG + chr4_3:55854171-55854190 Msa0649240:CDS 45.0%
CAATTCTCTTCATGGATGGG+AGG + chr4_3:55854317-55854336 Msa0649240:CDS 45.0%
CACACATCCCTTGTAACTTC+AGG - chr4_3:55854622-55854641 None:intergenic 45.0%
TACAAGGGATGTGTGTTTGC+TGG + chr4_3:55854627-55854646 Msa0649240:CDS 45.0%
! GTGTTTGCTGGCTAGAATGA+TGG + chr4_3:55854639-55854658 Msa0649240:CDS 45.0%
!!! TGCTGCAGAGTTTTGGAAAC+AGG + chr4_3:55855127-55855146 Msa0649240:intron 45.0%
ATTAACACCACTAGCAGTGC+TGG + chr4_3:55855471-55855490 Msa0649240:intron 45.0%
GGTGATCAACCAATAGCTGA+TGG + chr4_3:55855891-55855910 Msa0649240:CDS 45.0%
TTTCACAAGTGAAAGCCCGA+AGG - chr4_3:55855949-55855968 None:intergenic 45.0%
ACATCCGTCAAGAATCAGAC+AGG + chr4_3:55855973-55855992 Msa0649240:CDS 45.0%
TGTGCCTGTCTGATTCTTGA+CGG - chr4_3:55855980-55855999 None:intergenic 45.0%
GAACTTCCTTCAGACAGCTT+TGG + chr4_3:55856179-55856198 Msa0649240:CDS 45.0%
TAAGCACCAAAGCTGTCTGA+AGG - chr4_3:55856188-55856207 None:intergenic 45.0%
TCTACAGCAAGCACATCAGA+TGG - chr4_3:55856233-55856252 None:intergenic 45.0%
TGATGTGAAGCAGCCACTAA+GGG + chr4_3:55856271-55856290 Msa0649240:CDS 45.0%
CCCGCCTATTCTCTATAGAA+TGG + chr4_3:55856348-55856367 Msa0649240:CDS 45.0%
TCAGACTCAGGAAAAGATGC+TGG + chr4_3:55856416-55856435 Msa0649240:CDS 45.0%
ACAATGTTCCATGGAAGAGG+AGG + chr4_3:55856518-55856537 Msa0649240:CDS 45.0%
CAATGTTCCATGGAAGAGGA+GGG + chr4_3:55856519-55856538 Msa0649240:CDS 45.0%
CAGCCACCAGATACTATTCA+TGG + chr4_3:55856587-55856606 Msa0649240:CDS 45.0%
GAGCCATGAATAGTATCTGG+TGG - chr4_3:55856593-55856612 None:intergenic 45.0%
! TCACTTCGGGTTACAGTTCA+AGG + chr4_3:55856611-55856630 Msa0649240:CDS 45.0%
!!! CATTCTGGTTTTGGTGAGAC+GGG - chr4_3:55856731-55856750 None:intergenic 45.0%
!!! CCATTCTGGTTTTGGTGAGA+CGG - chr4_3:55856732-55856751 None:intergenic 45.0%
GATGGCTGTCATTGCAACAA+AGG + chr4_3:55856769-55856788 Msa0649240:CDS 45.0%
!! GGAAGTATCAAGTTGAGTGG+CGG - chr4_3:55857198-55857217 None:intergenic 45.0%
!! GTGGGAAGTATCAAGTTGAG+TGG - chr4_3:55857201-55857220 None:intergenic 45.0%
ATACTTCCCACCATTGCTGA+GGG + chr4_3:55857210-55857229 Msa0649240:intron 45.0%
!!! GTTTTTGAAGCCCTCAGCAA+TGG - chr4_3:55857223-55857242 None:intergenic 45.0%
!! TGAAGGAATGTTCTGGTTCC+GGG - chr4_3:55857260-55857279 None:intergenic 45.0%
!! CTGAAGGAATGTTCTGGTTC+CGG - chr4_3:55857261-55857280 None:intergenic 45.0%
!! CACTTGGCTTTCGTTTTGAC+GGG - chr4_3:55857646-55857665 None:intergenic 45.0%
!! CCACTTGGCTTTCGTTTTGA+CGG - chr4_3:55857647-55857666 None:intergenic 45.0%
TCAAAACGAAAGCCAAGTGG+AGG + chr4_3:55857647-55857666 Msa0649240:CDS 45.0%
CAAAGATCCAAGGGATAGCA+CGG - chr4_3:55857685-55857704 None:intergenic 45.0%
CAAGGTTTCACTTACCGGTA+TGG + chr4_3:55857717-55857736 Msa0649240:CDS 45.0%
TTTCACTTACCGGTATGGCT+TGG + chr4_3:55857722-55857741 Msa0649240:CDS 45.0%
CACCCTTGACTTAGTTGAGA+TGG + chr4_3:55857838-55857857 Msa0649240:CDS 45.0%
AGTTGAGATGGTGTTTGCCA+AGG + chr4_3:55857850-55857869 Msa0649240:CDS 45.0%
GTTGAGATGGTGTTTGCCAA+GGG + chr4_3:55857851-55857870 Msa0649240:CDS 45.0%
TCCTAGTGTCAGATGAACTG+TGG + chr4_3:55857906-55857925 Msa0649240:CDS 45.0%
ACCACAGTTCATCTGACACT+AGG - chr4_3:55857910-55857929 None:intergenic 45.0%
TCAAGTAAGGGTCTCCTTCA+AGG - chr4_3:55858260-55858279 None:intergenic 45.0%
CGGAGTCTTTGCTTCAAGTA+AGG - chr4_3:55858273-55858292 None:intergenic 45.0%
GTAGGCTTGCAAGACATTGA+GGG - chr4_3:55858319-55858338 None:intergenic 45.0%
TGTAGGCTTGCAAGACATTG+AGG - chr4_3:55858320-55858339 None:intergenic 45.0%
AATGTGGCCTCAACTTCACA+TGG - chr4_3:55858371-55858390 None:intergenic 45.0%
ATGCAGTCCTTGGACAAATG+TGG - chr4_3:55858387-55858406 None:intergenic 45.0%
ACATTTGTCCAAGGACTGCA+TGG + chr4_3:55858386-55858405 Msa0649240:CDS 45.0%
!! ATAAGGGTATCCTCCAAACC+AGG - chr4_3:55858468-55858487 None:intergenic 45.0%
! ACAATGAAGGGTATAGCTGC+TGG + chr4_3:55858492-55858511 Msa0649240:CDS 45.0%
!!! AAAAATTATTATTTTTTATC+TGG + chr4_3:55852177-55852196 Msa0649240:intron 5.0%
!!! AAAATTATTATTTTTTATCT+GGG + chr4_3:55852178-55852197 Msa0649240:intron 5.0%
!! AATTTATAACTTAATATATA+AGG - chr4_3:55853711-55853730 None:intergenic 5.0%
!! TAAACATAAAATAAATAATT+TGG - chr4_3:55854056-55854075 None:intergenic 5.0%
!!! TTATTTATTTTATGTTTATA+TGG + chr4_3:55854058-55854077 Msa0649240:intron 5.0%
!!! TTTTTATCTATTTTTAAAAA+TGG - chr4_3:55857130-55857149 None:intergenic 5.0%
!! AGGAGTGTCCGTGCTTCATA+GGG - chr4_3:55852222-55852241 None:intergenic 50.0%
!! AAGGAGTGTCCGTGCTTCAT+AGG - chr4_3:55852223-55852242 None:intergenic 50.0%
TATGAAGCACGGACACTCCT+TGG + chr4_3:55852222-55852241 Msa0649240:intron 50.0%
ATGAAGCACGGATGCAGACA+CGG - chr4_3:55852325-55852344 None:intergenic 50.0%
ACGATCAAGTGCAGCTGATC+TGG + chr4_3:55852639-55852658 Msa0649240:intron 50.0%
CCTCAATCACAGCTGCATTG+CGG + chr4_3:55852662-55852681 Msa0649240:intron 50.0%
AGCTGTCTGCTGGGTATGAA+GGG + chr4_3:55852968-55852987 Msa0649240:CDS 50.0%
CCTCAGAAGTTGGAGGAACT+CGG + chr4_3:55853000-55853019 Msa0649240:CDS 50.0%
CTCAGAAGTTGGAGGAACTC+GGG + chr4_3:55853001-55853020 Msa0649240:CDS 50.0%
AGAATCCCCAGCATCAAGAC+CGG - chr4_3:55853037-55853056 None:intergenic 50.0%
! CTTTGTTGCAGAAGCACGGA+AGG + chr4_3:55853325-55853344 Msa0649240:CDS 50.0%
TGACGAGGCTTTGCAAAGAG+AGG + chr4_3:55853505-55853524 Msa0649240:CDS 50.0%
! TCTTCAGAGCGGTGTCAATG+CGG - chr4_3:55854253-55854272 None:intergenic 50.0%
!! GACACCGCTCTGAAGAACAT+TGG + chr4_3:55854257-55854276 Msa0649240:CDS 50.0%
ACTTCTGGCAGTTGTCCATG+TGG + chr4_3:55854808-55854827 Msa0649240:intron 50.0%
TGAGCTACGTATTCGTGCTG+AGG + chr4_3:55854842-55854861 Msa0649240:CDS 50.0%
ACACGATATGGCTCAGTTGG+AGG - chr4_3:55855155-55855174 None:intergenic 50.0%
! TCCCATCGGCTAGTAACTGT+CGG - chr4_3:55855226-55855245 None:intergenic 50.0%
! AGGTATTGCAGAGCTCCCAT+CGG - chr4_3:55855240-55855259 None:intergenic 50.0%
GAGCTCTGCAATACCTCAAG+AGG + chr4_3:55855244-55855263 Msa0649240:CDS 50.0%
GGAAAATCCAGCACTGCTAG+TGG - chr4_3:55855481-55855500 None:intergenic 50.0%
TTGCGGCAAGTTTCCACCTT+CGG + chr4_3:55855930-55855949 Msa0649240:CDS 50.0%
GTGATGTGAAGCAGCCACTA+AGG + chr4_3:55856270-55856289 Msa0649240:CDS 50.0%
TGGTCGTTTCTCTGCAGCTT+GGG + chr4_3:55856436-55856455 Msa0649240:CDS 50.0%
TGCAGCTTGGGCAATGTACA+AGG + chr4_3:55856448-55856467 Msa0649240:CDS 50.0%
AAGAGGAGGGACTGTAGGAA+GGG + chr4_3:55856532-55856551 Msa0649240:CDS 50.0%
ACTGCTGCTACACTTGAGCA+TGG + chr4_3:55856695-55856714 Msa0649240:CDS 50.0%
CCGTCTCACCAAAACCAGAA+TGG + chr4_3:55856729-55856748 Msa0649240:CDS 50.0%
!!! AGGGTACGCCATTCTGGTTT+TGG - chr4_3:55856740-55856759 None:intergenic 50.0%
GACAGCCATCTCATCCATGA+GGG - chr4_3:55856759-55856778 None:intergenic 50.0%
TGACAGCCATCTCATCCATG+AGG - chr4_3:55856760-55856779 None:intergenic 50.0%
!!! GGATTTTTTCAGCAGTGCCC+AGG - chr4_3:55857068-55857087 None:intergenic 50.0%
CAAAAATGTTGAGGCGGTGG+TGG - chr4_3:55857095-55857114 None:intergenic 50.0%
!! AGTATCAAGTTGAGTGGCGG+TGG - chr4_3:55857195-55857214 None:intergenic 50.0%
GATACTTCCCACCATTGCTG+AGG + chr4_3:55857209-55857228 Msa0649240:intron 50.0%
TTGAAGCCCTCAGCAATGGT+GGG - chr4_3:55857219-55857238 None:intergenic 50.0%
! TTTGAAGCCCTCAGCAATGG+TGG - chr4_3:55857220-55857239 None:intergenic 50.0%
! GCAACTCCTGAGTTGGAGTA+TGG + chr4_3:55857599-55857618 Msa0649240:CDS 50.0%
!! TTGGCTTTCGTTTTGACGGG+CGG - chr4_3:55857643-55857662 None:intergenic 50.0%
CCGTCAAAACGAAAGCCAAG+TGG + chr4_3:55857644-55857663 Msa0649240:CDS 50.0%
AATCACTCCGTGCTATCCCT+TGG + chr4_3:55857675-55857694 Msa0649240:CDS 50.0%
CTATCCCTTGGATCTTTGCC+TGG + chr4_3:55857687-55857706 Msa0649240:CDS 50.0%
GAGTCCAGGCAAAGATCCAA+GGG - chr4_3:55857694-55857713 None:intergenic 50.0%
TGAGTCCAGGCAAAGATCCA+AGG - chr4_3:55857695-55857714 None:intergenic 50.0%
TCTTTGCCTGGACTCAGACA+AGG + chr4_3:55857699-55857718 Msa0649240:CDS 50.0%
GTGAAACCTTGTCTGAGTCC+AGG - chr4_3:55857708-55857727 None:intergenic 50.0%
! TTACCGGTATGGCTTGGCTT+TGG + chr4_3:55857728-55857747 Msa0649240:CDS 50.0%
TCAAGGGTGACCCTGAAGAA+TGG - chr4_3:55857827-55857846 None:intergenic 50.0%
CGTAAAGAGTTGCGATCCCT+GGG - chr4_3:55857880-55857899 None:intergenic 50.0%
TCGTAAAGAGTTGCGATCCC+TGG - chr4_3:55857881-55857900 None:intergenic 50.0%
AACCAAGAGCCTTCTCCTCA+TGG + chr4_3:55857964-55857983 Msa0649240:CDS 50.0%
TACCATGAGGAGAAGGCTCT+TGG - chr4_3:55857969-55857988 None:intergenic 50.0%
TTGGCTGCTGTACATGGATG+CGG + chr4_3:55858047-55858066 Msa0649240:intron 50.0%
ACGGATTCGCTTCAGTGTGT+AGG - chr4_3:55858337-55858356 None:intergenic 50.0%
GTTGAGGCCACATTTGTCCA+AGG + chr4_3:55858377-55858396 Msa0649240:CDS 50.0%
GCTTGATTCCATGCAGTCCT+TGG - chr4_3:55858397-55858416 None:intergenic 50.0%
CTGCATGGAATCAAGCAACC+CGG + chr4_3:55858401-55858420 Msa0649240:CDS 50.0%
AGTTTCACAAGCTCTGCTGC+CGG - chr4_3:55858423-55858442 None:intergenic 50.0%
GAGTGACTATGCTCCTGGTT+TGG + chr4_3:55858452-55858471 Msa0649240:CDS 50.0%
!! TGACTATGCTCCTGGTTTGG+AGG + chr4_3:55858455-55858474 Msa0649240:CDS 50.0%
!! ATTAACGGTGTCGGCGTGTC+CGG + chr4_3:55852296-55852315 Msa0649240:intron 55.0%
CCGCAATGCAGCTGTGATTG+AGG - chr4_3:55852665-55852684 None:intergenic 55.0%
GAGCTGTCTGCTGGGTATGA+AGG + chr4_3:55852967-55852986 Msa0649240:CDS 55.0%
CCGAGTTCCTCCAACTTCTG+AGG - chr4_3:55853003-55853022 None:intergenic 55.0%
GAACTCGGGAACATGCTGAC+CGG + chr4_3:55853015-55853034 Msa0649240:CDS 55.0%
ATGCTGACCGGTCTTGATGC+TGG + chr4_3:55853027-55853046 Msa0649240:CDS 55.0%
TGCTGACCGGTCTTGATGCT+GGG + chr4_3:55853028-55853047 Msa0649240:CDS 55.0%
GATCTGCGAACAGACTGGGT+AGG - chr4_3:55853306-55853325 None:intergenic 55.0%
CCTGCCCTCATTTCGTCTTG+TGG - chr4_3:55854179-55854198 None:intergenic 55.0%
CCACAAGACGAAATGAGGGC+AGG + chr4_3:55854176-55854195 Msa0649240:CDS 55.0%
TGGATGGGAGGAGATCGTGA+TGG + chr4_3:55854329-55854348 Msa0649240:CDS 55.0%
CTCATCATTGCAGCGCCACA+TGG - chr4_3:55854826-55854845 None:intergenic 55.0%
! CCCATCGGCTAGTAACTGTC+GGG - chr4_3:55855225-55855244 None:intergenic 55.0%
CCCGACAGTTACTAGCCGAT+GGG + chr4_3:55855222-55855241 Msa0649240:CDS 55.0%
TGCGGCAAGTTTCCACCTTC+GGG + chr4_3:55855931-55855950 Msa0649240:CDS 55.0%
CACAAGTGAAAGCCCGAAGG+TGG - chr4_3:55855946-55855965 None:intergenic 55.0%
GAGAATGGTCTGAGGAACGC+AGG + chr4_3:55856048-55856067 Msa0649240:CDS 55.0%
TGGCTGTTGTCTGAGCTCAG+TGG + chr4_3:55856077-55856096 Msa0649240:CDS 55.0%
!! AGTGGAAAGCGCCCTCTCTT+TGG + chr4_3:55856095-55856114 Msa0649240:CDS 55.0%
GAAGATCGGGGCCAAAGAGA+GGG - chr4_3:55856109-55856128 None:intergenic 55.0%
!! AATAGGCGGGCTATTGCAGC+AGG - chr4_3:55856338-55856357 None:intergenic 55.0%
CTGGTCGTTTCTCTGCAGCT+TGG + chr4_3:55856435-55856454 Msa0649240:CDS 55.0%
CTACAGTCCCTCCTCTTCCA+TGG - chr4_3:55856529-55856548 None:intergenic 55.0%
CATGGAAGAGGAGGGACTGT+AGG + chr4_3:55856527-55856546 Msa0649240:CDS 55.0%
GAAGAGGAGGGACTGTAGGA+AGG + chr4_3:55856531-55856550 Msa0649240:CDS 55.0%
AGAGGAGGGACTGTAGGAAG+GGG + chr4_3:55856533-55856552 Msa0649240:CDS 55.0%
!!! CTGGTTTTGGTGAGACGGGA+GGG - chr4_3:55856727-55856746 None:intergenic 55.0%
!!! TCTGGTTTTGGTGAGACGGG+AGG - chr4_3:55856728-55856747 None:intergenic 55.0%
ACCAGAATGGCGTACCCTCA+TGG + chr4_3:55856742-55856761 Msa0649240:CDS 55.0%
! TCCATGAGGGTACGCCATTC+TGG - chr4_3:55856746-55856765 None:intergenic 55.0%
GCGTACCCTCATGGATGAGA+TGG + chr4_3:55856751-55856770 Msa0649240:CDS 55.0%
! AAATGTTGAGGCGGTGGTGG+TGG - chr4_3:55857092-55857111 None:intergenic 55.0%
TTTCAGCAGTGGCAATGCCC+AGG - chr4_3:55857166-55857185 None:intergenic 55.0%
ACTGCAGGCAACTCCTGAGT+TGG + chr4_3:55857592-55857611 Msa0649240:intron 55.0%
GCTCCAAAGCCAAGCCATAC+CGG - chr4_3:55857734-55857753 None:intergenic 55.0%
!! GGTATGGCTTGGCTTTGGAG+CGG + chr4_3:55857733-55857752 Msa0649240:CDS 55.0%
TGTTTGCCAAGGGAGACCCA+GGG + chr4_3:55857861-55857880 Msa0649240:CDS 55.0%
GTTTCACAAGCTCTGCTGCC+GGG - chr4_3:55858422-55858441 None:intergenic 55.0%
! CCAGGAGCATAGTCACTCGT+AGG - chr4_3:55858450-55858469 None:intergenic 55.0%
CCTACGAGTGACTATGCTCC+TGG + chr4_3:55858447-55858466 Msa0649240:CDS 55.0%
ACGGATGCAGACACGGACAC+CGG - chr4_3:55852318-55852337 None:intergenic 60.0%
GCTGACCGGTCTTGATGCTG+GGG + chr4_3:55853029-55853048 Msa0649240:CDS 60.0%
GCCCGACAGTTACTAGCCGA+TGG + chr4_3:55855221-55855240 Msa0649240:CDS 60.0%
ATGGTCTGAGGAACGCAGGC+AGG + chr4_3:55856052-55856071 Msa0649240:CDS 60.0%
CTGAGGAACGCAGGCAGGAA+TGG + chr4_3:55856057-55856076 Msa0649240:CDS 60.0%
GGAAGATCGGGGCCAAAGAG+AGG - chr4_3:55856110-55856129 None:intergenic 60.0%
GTGTTTGCCAAGGGAGACCC+AGG + chr4_3:55857860-55857879 Msa0649240:CDS 60.0%
GCTGCTGGCATGCAGAACAC+TGG + chr4_3:55858507-55858526 Msa0649240:CDS 60.0%
GGAGGGACTGTAGGAAGGGG+AGG + chr4_3:55856536-55856555 Msa0649240:CDS 65.0%
GGGACTGTAGGAAGGGGAGG+AGG + chr4_3:55856539-55856558 Msa0649240:CDS 65.0%
!! TGTTGAGGCGGTGGTGGTGG+AGG - chr4_3:55857089-55857108 None:intergenic 65.0%
TGCGATCCCTGGGTCTCCCT+TGG - chr4_3:55857870-55857889 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 55851499 55858695 55851499 ID=Msa0649240;Name=Msa0649240
chr4_3 mRNA 55851499 55858695 55851499 ID=Msa0649240-mRNA-1;Parent=Msa0649240;Name=Msa0649240-mRNA-1;_AED=0.02;_eAED=0.02;_QI=97|1|1|1|0.9|0.81|11|162|966
chr4_3 exon 55851499 55851580 55851499 ID=Msa0649240-mRNA-1:exon:14374;Parent=Msa0649240-mRNA-1
chr4_3 exon 55851730 55851912 55851730 ID=Msa0649240-mRNA-1:exon:14375;Parent=Msa0649240-mRNA-1
chr4_3 exon 55852952 55853346 55852952 ID=Msa0649240-mRNA-1:exon:14376;Parent=Msa0649240-mRNA-1
chr4_3 exon 55853442 55853526 55853442 ID=Msa0649240-mRNA-1:exon:14377;Parent=Msa0649240-mRNA-1
chr4_3 exon 55854128 55854350 55854128 ID=Msa0649240-mRNA-1:exon:14378;Parent=Msa0649240-mRNA-1
chr4_3 exon 55854602 55854705 55854602 ID=Msa0649240-mRNA-1:exon:14379;Parent=Msa0649240-mRNA-1
chr4_3 exon 55854819 55854906 55854819 ID=Msa0649240-mRNA-1:exon:14380;Parent=Msa0649240-mRNA-1
chr4_3 exon 55855135 55855289 55855135 ID=Msa0649240-mRNA-1:exon:14381;Parent=Msa0649240-mRNA-1
chr4_3 exon 55855846 55856844 55855846 ID=Msa0649240-mRNA-1:exon:14382;Parent=Msa0649240-mRNA-1
chr4_3 exon 55857599 55857985 55857599 ID=Msa0649240-mRNA-1:exon:14383;Parent=Msa0649240-mRNA-1
chr4_3 exon 55858237 55858695 55858237 ID=Msa0649240-mRNA-1:exon:14384;Parent=Msa0649240-mRNA-1
chr4_3 five_prime_UTR 55851499 55851580 55851499 ID=Msa0649240-mRNA-1:five_prime_utr;Parent=Msa0649240-mRNA-1
chr4_3 five_prime_UTR 55851730 55851744 55851730 ID=Msa0649240-mRNA-1:five_prime_utr;Parent=Msa0649240-mRNA-1
chr4_3 CDS 55851745 55851912 55851745 ID=Msa0649240-mRNA-1:cds;Parent=Msa0649240-mRNA-1
chr4_3 CDS 55852952 55853346 55852952 ID=Msa0649240-mRNA-1:cds;Parent=Msa0649240-mRNA-1
chr4_3 CDS 55853442 55853526 55853442 ID=Msa0649240-mRNA-1:cds;Parent=Msa0649240-mRNA-1
chr4_3 CDS 55854128 55854350 55854128 ID=Msa0649240-mRNA-1:cds;Parent=Msa0649240-mRNA-1
chr4_3 CDS 55854602 55854705 55854602 ID=Msa0649240-mRNA-1:cds;Parent=Msa0649240-mRNA-1
chr4_3 CDS 55854819 55854906 55854819 ID=Msa0649240-mRNA-1:cds;Parent=Msa0649240-mRNA-1
chr4_3 CDS 55855135 55855289 55855135 ID=Msa0649240-mRNA-1:cds;Parent=Msa0649240-mRNA-1
chr4_3 CDS 55855846 55856844 55855846 ID=Msa0649240-mRNA-1:cds;Parent=Msa0649240-mRNA-1
chr4_3 CDS 55857599 55857985 55857599 ID=Msa0649240-mRNA-1:cds;Parent=Msa0649240-mRNA-1
chr4_3 CDS 55858237 55858533 55858237 ID=Msa0649240-mRNA-1:cds;Parent=Msa0649240-mRNA-1
chr4_3 three_prime_UTR 55858534 55858695 55858534 ID=Msa0649240-mRNA-1:three_prime_utr;Parent=Msa0649240-mRNA-1
Gene Sequence

>Msa0649240

ATGACAAGTAGGAAGCTAGAGAAGATGGCTTCGATTGATGCTCAGTTGAGGTTGTTAGCACCTAGTAAGGTGTCTGATGATGATAAGCTTGTGGAGTATGATGCTTTGTTGCTTGATCGTTTCCTTGATATTCTTCAGGATTTGCATGGCCATGATATCCGAGAAACGGTTCAAAACTGTTATGAGCTGTCTGCTGGGTATGAAGGGAACAATAATCCTCAGAAGTTGGAGGAACTCGGGAACATGCTGACCGGTCTTGATGCTGGGGATTCTATCGTCATTGCCAAGTCATTCTCTCACATGCTTAACTTGGCCAATTTGGCAGAAGAAGTTCAAATTGCCTACCGCAGAAGGATTAAGTTATTAAAGAAGGGGGATTTTGGTGATGAGAACTCTGCCATCACTGAGTCAGACATTGAAGAGACCTTCAAGAGGCTTGTGAATCAACTGAAGAAGACCCCTCTTGAAGTCTTTGATGCTTTGAAGAGCCAAACTGTTGATTTGGTCTTAACTGCTCATCCTACCCAGTCTGTTCGCAGATCTTTGTTGCAGAAGCACGGAAGGGTCAGGGATTGTTTGACTCAGTTGTATGCAAAAGATATTACACCAGATGATAAGCAGGAACTTGACGAGGCTTTGCAAAGAGAGATTCAAGCTGCATTTCGCACCGATGAAATTCGAAGAACTCCTCCTACACCACAAGACGAAATGAGGGCAGGAATGAGCTACTTTCATGAGACAATCTGGAAAGGTGTACCAAAATTTTTGCGCCGCATTGACACCGCTCTGAAGAACATTGGAATAAATGAACGCATCCCATATAATGCCCCTATTATTCAATTCTCTTCATGGATGGGAGGAGATCGTGATGGAAACCCCAGAGTAACTCCTGAAGTTACAAGGGATGTGTGTTTGCTGGCTAGAATGATGGCTGCTAATCTGTACTTCTCTCAAATTGAGGATCTCATGTTTGAGTTGTCCATGTGGCGCTGCAATGATGAGCTACGTATTCGTGCTGAGGAACTTCACAGCTCAGCAAAAAGAGATGCAAAACATTATATTGAGTTTTGGAAACAGGTTCCTCCAACTGAGCCATATCGTGTTATTCTTGGTGATGTGAGGGACAAACTATATAATACACGTGAACATGCCCGACAGTTACTAGCCGATGGGAGCTCTGCAATACCTCAAGAGGCTATCTTCACAAATGTTGAACAGTTCTTGGAGCCTCTTGAACTATGCTATAGGTCATTGTGTGCATGTGGTGATCAACCAATAGCTGATGGAAGTCTTCTTGATTTCTTGCGGCAAGTTTCCACCTTCGGGCTTTCACTTGTGAAACTTGACATCCGTCAAGAATCAGACAGGCACACTGATGTTATGAATGCTATAACAAACCACTTGGAGATTGGATCTTATCGAGAATGGTCTGAGGAACGCAGGCAGGAATGGCTGTTGTCTGAGCTCAGTGGAAAGCGCCCTCTCTTTGGCCCCGATCTTCCTAAAACTGAAGAAATTGCTGATGTGCTGGATACTTTCCGTGTCATTGCTGAACTTCCTTCAGACAGCTTTGGTGCTTATATCATTTCAATGGCAACATCTCCATCTGATGTGCTTGCTGTAGAACTTTTACAACGTGAATGTGATGTGAAGCAGCCACTAAGGGTCGTTCCATTATTTGAAAAACTTGCTGATCTTGAGGCTGCTCCTGCTGCAATAGCCCGCCTATTCTCTATAGAATGGTACAGAAACCGTATCAACGGAAAACAAGAAGTTATGATAGGATACTCAGACTCAGGAAAAGATGCTGGTCGTTTCTCTGCAGCTTGGGCAATGTACAAGGCTCAAGAAGAACTTATAAAGGTTGCAAAGGAGTTTGGTGTTAAGCTTACAATGTTCCATGGAAGAGGAGGGACTGTAGGAAGGGGAGGAGGCCCCACTCATCTTGCTATATTATCTCAGCCACCAGATACTATTCATGGCTCACTTCGGGTTACAGTTCAAGGTGAAGTTATTGAACAGTCATTTGGAGAGGAGCACTTGTGCTTCAGAACACTTCAGCGTTTCACTGCTGCTACACTTGAGCATGGAATGCACCCTCCCGTCTCACCAAAACCAGAATGGCGTACCCTCATGGATGAGATGGCTGTCATTGCAACAAAGGAGTATCGCTCCATTGTTTTTCTGGAACCTCGTTTTGTTGAATACTTCAGATGTGCAACTCCTGAGTTGGAGTATGGAAGAATGAACATTGGCAGCCGCCCGTCAAAACGAAAGCCAAGTGGAGGAATTGAATCACTCCGTGCTATCCCTTGGATCTTTGCCTGGACTCAGACAAGGTTTCACTTACCGGTATGGCTTGGCTTTGGAGCGGCATTCAAGCATGTAATTGAGAAGGATTCAAAGAATCTCCAAATGCTTCGAGATATGTATAATCAATGGCCATTCTTCAGGGTCACCCTTGACTTAGTTGAGATGGTGTTTGCCAAGGGAGACCCAGGGATCGCAACTCTTTACGACAAACTCCTAGTGTCAGATGAACTGTGGTCATTTGGAGAGAGATTAAGGTCTGCTTATGAAGAAACCAAGAGCCTTCTCCTCATGGTTGCTGGACACAAAGATATCCTTGAAGGAGACCCTTACTTGAAGCAAAGACTCCGTCTTCGTGATTCATACATCACAACCCTCAATGTCTTGCAAGCCTACACACTGAAGCGAATCCGTGATCCTGATTACCATGTGAAGTTGAGGCCACATTTGTCCAAGGACTGCATGGAATCAAGCAACCCGGCAGCAGAGCTTGTGAAACTCAATCCTACGAGTGACTATGCTCCTGGTTTGGAGGATACCCTTATTCTGACAATGAAGGGTATAGCTGCTGGCATGCAGAACACTGGTTAA
Protein sequence

>Msa0649240

MTSRKLEKMASIDAQLRLLAPSKVSDDDKLVEYDALLLDRFLDILQDLHGHDIRETVQNCYELSAGYEGNNNPQKLEELGNMLTGLDAGDSIVIAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFGDENSAITESDIEETFKRLVNQLKKTPLEVFDALKSQTVDLVLTAHPTQSVRRSLLQKHGRVRDCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRIDTALKNIGINERIPYNAPIIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRIRAEELHSSAKRDAKHYIEFWKQVPPTEPYRVILGDVRDKLYNTREHARQLLADGSSAIPQEAIFTNVEQFLEPLELCYRSLCACGDQPIADGSLLDFLRQVSTFGLSLVKLDIRQESDRHTDVMNAITNHLEIGSYREWSEERRQEWLLSELSGKRPLFGPDLPKTEEIADVLDTFRVIAELPSDSFGAYIISMATSPSDVLAVELLQRECDVKQPLRVVPLFEKLADLEAAPAAIARLFSIEWYRNRINGKQEVMIGYSDSGKDAGRFSAAWAMYKAQEELIKVAKEFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRTLMDEMAVIATKEYRSIVFLEPRFVEYFRCATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIEKDSKNLQMLRDMYNQWPFFRVTLDLVEMVFAKGDPGIATLYDKLLVSDELWSFGERLRSAYEETKSLLLMVAGHKDILEGDPYLKQRLRLRDSYITTLNVLQAYTLKRIRDPDYHVKLRPHLSKDCMESSNPAAELVKLNPTSDYAPGLEDTLILTMKGIAAGMQNTG*