AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1116950


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1116950 MtrunA17_Chr7g0259491 92.081 442 10 1 1 442 1 417 0.0 823
Msa1116950 MtrunA17_Chr1g0196611 54.186 430 163 5 1 428 2 399 6.12e-148 427
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1116950 AT4G02920.2 33.036 448 259 11 4 442 3 418 4.32e-62 207
Msa1116950 AT4G02920.1 32.816 451 255 13 4 442 3 417 2.06e-61 205
Msa1116950 AT1G03340.1 32.723 382 187 11 69 442 66 385 9.61e-43 155

Find 114 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACCTTAATTGCTCCTTTA+AGG 0.086245 7_3:-64999503 Msa1116950:CDS
TGTCATCAAACCATTTATTT+TGG 0.095179 7_3:+65001792 None:intergenic
TGATGGTCAAATCACATTTA+TGG 0.142350 7_3:-65001008 Msa1116950:CDS
TTGGGTTAGTTTGGCTTTCT+TGG 0.148840 7_3:-64998084 Msa1116950:CDS
CATAGTGCATACCTCCTTAA+AGG 0.165058 7_3:+64999489 None:intergenic
TTCAATACCGGGTTAGGATT+TGG 0.235587 7_3:-64998103 Msa1116950:CDS
CCTCCTTAAAGGAGCAATTA+AGG 0.241525 7_3:+64999500 None:intergenic
AGTTTGTTGAACTGTAAATT+TGG 0.267176 7_3:-64997880 Msa1116950:three_prime_UTR
TTAGTATGGGATTCCTATTC+AGG 0.269221 7_3:-65002531 Msa1116950:five_prime_UTR
CGATGGAAACCCAAAATAAA+TGG 0.279469 7_3:-65001802 Msa1116950:CDS
GGTTTGAGTTTCACTTTCTT+AGG 0.281846 7_3:+64998391 None:intergenic
ACCGGAGGACCGTCTTCTTT+TGG 0.285085 7_3:+65000370 None:intergenic
AGTTCAACAAACTACATCTT+TGG 0.285924 7_3:+64997890 None:intergenic
CAAATTTCTGCAGGCATTGC+TGG 0.307977 7_3:-64998202 Msa1116950:CDS
TAAAGATTTCTTAGTGGAAC+TGG 0.308051 7_3:+64997828 None:intergenic
GAAGTTAGGGAGAGAAATAA+TGG 0.309953 7_3:-65000414 Msa1116950:CDS
AAGATTACAGTTGATCTTGA+TGG 0.311103 7_3:-65001025 Msa1116950:CDS
GATGGTCAAATCACATTTAT+GGG 0.314731 7_3:-65001007 Msa1116950:CDS
TCAATACCGGGTTAGGATTT+GGG 0.322556 7_3:-64998102 Msa1116950:CDS
TGGTTCAGAAACTCGATAAA+AGG 0.333502 7_3:-64997985 Msa1116950:CDS
GTAGCGGTGCAAAGGAAGTT+AGG 0.336131 7_3:-65000428 Msa1116950:intron
CGCCATTGGTTGAACGACTT+TGG 0.354888 7_3:-65002500 Msa1116950:five_prime_UTR
TTGAGGTCAAATTTGTCATC+AGG 0.356612 7_3:+65001091 None:intergenic
TATAAAAGAGATGATGAAAA+TGG 0.366840 7_3:+65001115 None:intergenic
GATTGCATCTTCACTGTAGA+TGG 0.367369 7_3:+64999525 None:intergenic
ATTCAGCGGTTCCAGACTTT+AGG 0.367769 7_3:+65001218 None:intergenic
TGGGTTAGTTTGGCTTTCTT+GGG 0.372441 7_3:-64998083 Msa1116950:CDS
GGTTAGGATTTGGGTTAGTT+TGG 0.373556 7_3:-64998093 Msa1116950:CDS
GAAATCTTTAAGACAACAAT+TGG 0.385420 7_3:-64997815 Msa1116950:three_prime_UTR
CTCTGATTTCCTTCAGAAGA+TGG 0.388377 7_3:-65002341 Msa1116950:exon
GCGTCCAGCTTGTTCAATAC+CGG 0.391238 7_3:-64998115 Msa1116950:CDS
AACTGTAATCTTTGAAGAAA+AGG 0.393747 7_3:+65001036 None:intergenic
ACAAGAAAATTGACAGAGAA+AGG 0.405326 7_3:-64998354 Msa1116950:CDS
CACTGGTAACTGAGCACGTC+TGG 0.407106 7_3:+65001857 None:intergenic
AGCAAGAATGCAGGGAAGTT+GGG 0.415107 7_3:-64998025 Msa1116950:CDS
AGCTTGTTCAATACCGGGTT+AGG 0.421443 7_3:-64998109 Msa1116950:CDS
CAGCAAGAATGCAGGGAAGT+TGG 0.427856 7_3:-64998026 Msa1116950:CDS
TTGTCTTAAAGATTTCTTAG+TGG 0.434096 7_3:+64997822 None:intergenic
ATTTCAAAGCACCTAAAGTC+TGG 0.434478 7_3:-65001229 Msa1116950:CDS
TTGATGAAATTGCAGTTGTC+AGG 0.446115 7_3:-65001157 Msa1116950:CDS
GGGTTTGAAAGAAGAGGAAA+TGG 0.452832 7_3:-64998005 Msa1116950:CDS
TGGCGGGCATGAGCCTGAAT+AGG 0.454899 7_3:+65002518 None:intergenic
TCTGCAGGCATTGCTGGGAC+AGG 0.455168 7_3:-64998196 Msa1116950:CDS
GCCTCTCATACCTACCCTCC+AGG 0.457429 7_3:-65002298 Msa1116950:CDS
TGCTTGTTCCATACTTCAGC+AGG 0.457775 7_3:-65000898 Msa1116950:intron
CCTTGGGTGTCAACTGATAC+AGG 0.458456 7_3:+65001734 None:intergenic
TTCAGGCTCATGCCCGCCAT+TGG 0.465194 7_3:-65002514 Msa1116950:five_prime_UTR
CTTGCTGATGCTGACAATTG+TGG 0.469254 7_3:+64998042 None:intergenic
GCAATATCATAGTTTGATGT+AGG 0.475868 7_3:-64997766 Msa1116950:three_prime_UTR
TTTCTTACACAAATTTCTGC+AGG 0.480521 7_3:-64998211 Msa1116950:CDS
GTCAGCATCAGCAAGAATGC+AGG 0.487002 7_3:-64998034 Msa1116950:CDS
ATTCCTTCGCTGAAGAAATC+CGG 0.487763 7_3:-64998250 Msa1116950:CDS
GATAGACTTGGCTTAAGAAA+AGG 0.490107 7_3:+65001833 None:intergenic
TTGGATCTCTAAAGTGATGA+TGG 0.493386 7_3:-64997861 Msa1116950:three_prime_UTR
TGTTGACCATCAAGGACAAA+AGG 0.493852 7_3:+64998296 None:intergenic
ATGTTAATTCCTCACCTCAA+TGG 0.502348 7_3:-65001757 Msa1116950:CDS
CGTCCAGCTTGTTCAATACC+GGG 0.505852 7_3:-64998114 Msa1116950:CDS
CTTGGGCAGTAAGTAAGCTA+AGG 0.507686 7_3:-64998066 Msa1116950:CDS
GAGAGAAATAATGGGAAAGC+AGG 0.508621 7_3:-65000405 Msa1116950:CDS
CATGTCAAAGAGCTTACATA+AGG 0.508648 7_3:-65000936 Msa1116950:CDS
AAGTCTATCTGCCGAGTCGA+TGG 0.511435 7_3:-65001819 Msa1116950:CDS
TGTTGTTGTAAGACAAGGCC+TGG 0.512061 7_3:+65002280 None:intergenic
GCCAAAAGAAGACGGTCCTC+CGG 0.519094 7_3:-65000371 Msa1116950:intron
AGGATTAGAGATATTTACTT+CGG 0.519138 7_3:-64997965 Msa1116950:CDS
CAAGAAAATTGACAGAGAAA+GGG 0.521736 7_3:-64998353 Msa1116950:CDS
TGTAAGAAACTCAGAAAGCT+CGG 0.527161 7_3:+64998225 None:intergenic
AAACTCAGAAAGCTCGGGAC+CGG 0.527375 7_3:+64998231 None:intergenic
AAGTTAGGGAGAGAAATAAT+GGG 0.527866 7_3:-65000413 Msa1116950:CDS
TGAGGTCAAATTTGTCATCA+GGG 0.532738 7_3:+65001092 None:intergenic
TAGCGGTGCAAAGGAAGTTA+GGG 0.538252 7_3:-65000427 Msa1116950:CDS
TAAAAGTACAGCATTTGAGC+AGG 0.542688 7_3:+65001291 None:intergenic
TTGATGTAGGAAGCATTGCT+TGG 0.543808 7_3:-64997753 Msa1116950:three_prime_UTR
ATCGACTCGGCAGATAGACT+TGG 0.543922 7_3:+65001821 None:intergenic
TCTGTAAACTAGCTTGTGGA+AGG 0.546336 7_3:-64998150 Msa1116950:CDS
AAATTTCTGCAGGCATTGCT+GGG 0.547448 7_3:-64998201 Msa1116950:CDS
TTTCATCAAGTCTAACATCA+AGG 0.557831 7_3:+65001171 None:intergenic
TTCCAAAGTCGTTCAACCAA+TGG 0.558820 7_3:+65002498 None:intergenic
GCCTGGAGGGTAGGTATGAG+AGG 0.559656 7_3:+65002297 None:intergenic
GTCTCTGCACCATCTTCTGA+AGG 0.565605 7_3:+65002332 None:intergenic
GAAGTTGGGTTTGAAAGAAG+AGG 0.568730 7_3:-64998011 Msa1116950:CDS
TAAGACAAGGCCTGGAGGGT+AGG 0.568949 7_3:+65002288 None:intergenic
GTAATCTGTAAACTAGCTTG+TGG 0.570115 7_3:-64998154 Msa1116950:CDS
TTAAACTTGTAGCGGTGCAA+AGG 0.570473 7_3:-65000436 Msa1116950:intron
TATTAAACAAACAAAACAAG+TGG 0.578838 7_3:-65002465 Msa1116950:five_prime_UTR
GTAAGAAACTCAGAAAGCTC+GGG 0.580957 7_3:+64998226 None:intergenic
AAAGTCGTTCAACCAATGGC+GGG 0.581039 7_3:+65002502 None:intergenic
TTGGGCAGTAAGTAAGCTAA+GGG 0.581175 7_3:-64998065 Msa1116950:CDS
GGACCGGATTTCTTCAGCGA+AGG 0.582537 7_3:+64998247 None:intergenic
CTGTAAACTAGCTTGTGGAA+GGG 0.584100 7_3:-64998149 Msa1116950:CDS
CCTTAATTGCTCCTTTAAGG+AGG 0.588973 7_3:-64999500 Msa1116950:intron
GTTGTAAGACAAGGCCTGGA+GGG 0.590880 7_3:+65002284 None:intergenic
TCAACTGATACAGGCCATTG+AGG 0.595001 7_3:+65001743 None:intergenic
ACTATCTTTACGCGATTCAG+CGG 0.596799 7_3:+65001204 None:intergenic
ACAACAACAACTTCATCTCA+AGG 0.596977 7_3:-65002263 Msa1116950:intron
ATGGATATCAATGAAGCAGA+AGG 0.597338 7_3:-64999558 Msa1116950:CDS
GATGATGAAAATGGTTGTTG+AGG 0.605604 7_3:+65001124 None:intergenic
CAAAGTCGTTCAACCAATGG+CGG 0.608335 7_3:+65002501 None:intergenic
TAATATTATTAATATTTGTG+TGG 0.610596 7_3:+65002405 None:intergenic
TAACCCGGTATTGAACAAGC+TGG 0.611936 7_3:+64998111 None:intergenic
AACTAACCCAAATCCTAACC+CGG 0.615247 7_3:+64998096 None:intergenic
TCAGCATCAGCAAGAATGCA+GGG 0.620127 7_3:-64998033 Msa1116950:CDS
TCTTGAAGAAAATACAGCAA+AGG 0.629477 7_3:+65001064 None:intergenic
AATGCTCAGCCAAAAGAAGA+CGG 0.632574 7_3:-65000379 Msa1116950:CDS
ATTAAACAAACAAAACAAGT+GGG 0.639802 7_3:-65002464 Msa1116950:five_prime_UTR
TTGGCTTAAGAAAAGGACAC+TGG 0.645172 7_3:+65001840 None:intergenic
CCTGTATCAGTTGACACCCA+AGG 0.646830 7_3:-65001734 Msa1116950:intron
TGATACAGGCCATTGAGGTG+AGG 0.651565 7_3:+65001748 None:intergenic
GGGTAGGTATGAGAGGCCAT+CGG 0.654610 7_3:+65002304 None:intergenic
AGATATTTACTTCGGCTCTG+CGG 0.655008 7_3:-64997957 Msa1116950:CDS
GGTGCAGAGACTGTGTCCGA+TGG 0.661426 7_3:-65002320 Msa1116950:CDS
AATACAGCAAAGGCTTCTTG+AGG 0.683189 7_3:+65001074 None:intergenic
GTTGTTGTTGTTGTAAGACA+AGG 0.689463 7_3:+65002275 None:intergenic
TGTTGTAAGACAAGGCCTGG+AGG 0.699115 7_3:+65002283 None:intergenic
TTACAGATAGTAGAACAGCA+AGG 0.718556 7_3:+64998173 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTATAATAATTATTAT+TGG + chr7_3:65002505-65002524 None:intergenic 0.0%
!! TAATATTATTAATATTTGTG+TGG + chr7_3:64997765-64997784 None:intergenic 10.0%
!!! TTTCATAAATGTTTAACTTT+CGG - chr7_3:64998006-64998025 Msa1116950:CDS 15.0%
!! TAGAAAAATAAACGATAAAA+TGG + chr7_3:64998473-64998492 None:intergenic 15.0%
!! AAAATCTTATAAACATAGAA+TGG + chr7_3:64999357-64999376 None:intergenic 15.0%
!! ATATTTACAAAACATCTAAA+AGG + chr7_3:64999453-64999472 None:intergenic 15.0%
!! ATAAAATTAGTGTAAAGAAT+AGG + chr7_3:65000263-65000282 None:intergenic 15.0%
!! AAATAACTGTTATTGTATTT+AGG - chr7_3:65001059-65001078 Msa1116950:CDS 15.0%
!! GAAACATTTACAATAAAAAT+TGG + chr7_3:65001285-65001304 None:intergenic 15.0%
!!! TTTATTGTAAATGTTTCTTT+TGG - chr7_3:65001288-65001307 Msa1116950:CDS 15.0%
!!! CTACTTTTTATTCAAAAATT+TGG - chr7_3:65001314-65001333 Msa1116950:intron 15.0%
!!! TGTAATATAGAATTTTGTTA+TGG - chr7_3:65002447-65002466 Msa1116950:five_prime_UTR 15.0%
!! TATTAAACAAACAAAACAAG+TGG - chr7_3:64997702-64997721 Msa1116950:three_prime_UTR 20.0%
!! ATTAAACAAACAAAACAAGT+GGG - chr7_3:64997703-64997722 Msa1116950:three_prime_UTR 20.0%
!!! TCATGTTTTCTAATTGTTTA+TGG - chr7_3:64997945-64997964 Msa1116950:CDS 20.0%
!! GAAAGTTAAACATTTATGAA+AGG + chr7_3:64998007-64998026 None:intergenic 20.0%
!!! TTCATAAATGTTTAACTTTC+GGG - chr7_3:64998007-64998026 Msa1116950:CDS 20.0%
!!! TTTTTAATATTTTCCATGAC+AGG - chr7_3:64998252-64998271 Msa1116950:CDS 20.0%
!!! CTAGTTCTAATATATGATAA+TGG + chr7_3:64998517-64998536 None:intergenic 20.0%
!! ACTGATAACAATTTGAAAAA+TGG + chr7_3:64998667-64998686 None:intergenic 20.0%
!! TAGATACAACATAAAAACAT+AGG + chr7_3:64998812-64998831 None:intergenic 20.0%
!!! TTTTATGTTGTATCTAATTC+TGG - chr7_3:64998816-64998835 Msa1116950:intron 20.0%
!! TATAAAAGAGATGATGAAAA+TGG + chr7_3:64999055-64999074 None:intergenic 20.0%
!! TTATAATCTACGTTGATATT+TGG - chr7_3:64999320-64999339 Msa1116950:intron 20.0%
!! TAAATATTAGAGTCGTATTT+CGG - chr7_3:64999466-64999485 Msa1116950:intron 20.0%
!!! ATTAGTAATGTTAGTTTCTA+AGG + chr7_3:64999546-64999565 None:intergenic 20.0%
!!! GTTAGTCTGAATTAAATTTT+CGG - chr7_3:65000100-65000119 Msa1116950:intron 20.0%
!!! TCTTTACACTAATTTTATGT+CGG - chr7_3:65000265-65000284 Msa1116950:intron 20.0%
!! ATTCAACTATCATGAATAAA+AGG + chr7_3:65000413-65000432 None:intergenic 20.0%
!!! CAGACACAAATTATATATTT+TGG - chr7_3:65001214-65001233 Msa1116950:CDS 20.0%
!! ATTCATGAAATAAAAAATGC+AGG + chr7_3:65001426-65001445 None:intergenic 20.0%
!! AAAAATTACTGTAAGCAATT+AGG + chr7_3:65001710-65001729 None:intergenic 20.0%
!! TCATAAATGTTTAACTTTCG+GGG - chr7_3:64998008-64998027 Msa1116950:CDS 25.0%
!!! TCTTAATTTGCACAATTCAA+AGG - chr7_3:64998051-64998070 Msa1116950:CDS 25.0%
!!! GTCATCAAACCATTTATTTT+GGG + chr7_3:64998377-64998396 None:intergenic 25.0%
!! TGTCATCAAACCATTTATTT+TGG + chr7_3:64998378-64998397 None:intergenic 25.0%
!! AACTGTAATCTTTGAAGAAA+AGG + chr7_3:64999134-64999153 None:intergenic 25.0%
! AAAACATGTCTTAATGATGA+AGG - chr7_3:64999595-64999614 Msa1116950:intron 25.0%
! ACCGCAAAAAGTTATTAAAA+CGG + chr7_3:64999890-64999909 None:intergenic 25.0%
! AAAAGGTTAAAATCTATAGC+TGG + chr7_3:65000396-65000415 None:intergenic 25.0%
! CAAATGTATTGAATAGTTCA+AGG + chr7_3:65000459-65000478 None:intergenic 25.0%
! CAACATTTATATGCTAAACA+AGG + chr7_3:65000772-65000791 None:intergenic 25.0%
!!! TGCAGATAAATCTTATTTTC+TGG - chr7_3:65000880-65000899 Msa1116950:intron 25.0%
!!! ATCTTATTTTCTGGTGTTTT+AGG - chr7_3:65000889-65000908 Msa1116950:intron 25.0%
! ACTAATTGTTATGTGTAGTT+TGG - chr7_3:65000962-65000981 Msa1116950:CDS 25.0%
! ATTCAAAGAATCAGTTTAGA+TGG + chr7_3:65001470-65001489 None:intergenic 25.0%
! TCATGTTGAAAATTTATCTG+TGG + chr7_3:65001573-65001592 None:intergenic 25.0%
! AGGATTAGAGATATTTACTT+CGG - chr7_3:65002202-65002221 Msa1116950:intron 25.0%
!!! AGTTTGTTGAACTGTAAATT+TGG - chr7_3:65002287-65002306 Msa1116950:CDS 25.0%
! TTGTCTTAAAGATTTCTTAG+TGG + chr7_3:65002348-65002367 None:intergenic 25.0%
!!! GAAATCTTTAAGACAACAAT+TGG - chr7_3:65002352-65002371 Msa1116950:five_prime_UTR 25.0%
! CATAAATGTTTAACTTTCGG+GGG - chr7_3:64998009-64998028 Msa1116950:CDS 30.0%
ATACAAGGAAGAGTTTGTAA+CGG + chr7_3:64998091-64998110 None:intergenic 30.0%
! TTTGCTACTTATTGTCTATG+TGG - chr7_3:64998153-64998172 Msa1116950:CDS 30.0%
ACGCATTCAATATGCAATAT+CGG + chr7_3:64998583-64998602 None:intergenic 30.0%
! ACCAATTTGTTTCATTGACA+CGG - chr7_3:64998740-64998759 Msa1116950:intron 30.0%
TTTCATCAAGTCTAACATCA+AGG + chr7_3:64998999-64999018 None:intergenic 30.0%
TCTTGAAGAAAATACAGCAA+AGG + chr7_3:64999106-64999125 None:intergenic 30.0%
AAGATTACAGTTGATCTTGA+TGG - chr7_3:64999142-64999161 Msa1116950:intron 30.0%
TGATGGTCAAATCACATTTA+TGG - chr7_3:64999159-64999178 Msa1116950:intron 30.0%
GATGGTCAAATCACATTTAT+GGG - chr7_3:64999160-64999179 Msa1116950:intron 30.0%
AAGTTGTGCATAATTGATAG+CGG - chr7_3:64999678-64999697 Msa1116950:intron 30.0%
ACTTAGGTTTAAACTTGTAG+CGG - chr7_3:64999723-64999742 Msa1116950:intron 30.0%
AAGTTAGGGAGAGAAATAAT+GGG - chr7_3:64999754-64999773 Msa1116950:intron 30.0%
!! TATTTTCTCTGGTTTCTTAC+CGG + chr7_3:64999818-64999837 None:intergenic 30.0%
CGCAAAAAGTTATTAAAACG+GGG + chr7_3:64999888-64999907 None:intergenic 30.0%
CCGCAAAAAGTTATTAAAAC+GGG + chr7_3:64999889-64999908 None:intergenic 30.0%
!! CCCGTTTTAATAACTTTTTG+CGG - chr7_3:64999886-64999905 Msa1116950:intron 30.0%
GGTTAATGCAAAATAAACCA+GGG + chr7_3:64999952-64999971 None:intergenic 30.0%
AAACAAGTAAAACAAGAGGT+GGG + chr7_3:65000055-65000074 None:intergenic 30.0%
AAAACAAGTAAAACAAGAGG+TGG + chr7_3:65000056-65000075 None:intergenic 30.0%
!!! ACCTCTTGTTTTACTTGTTT+TGG - chr7_3:65000055-65000074 Msa1116950:intron 30.0%
ACCAAAACAAGTAAAACAAG+AGG + chr7_3:65000059-65000078 None:intergenic 30.0%
!!! CTTGTTTTACTTGTTTTGGT+AGG - chr7_3:65000059-65000078 Msa1116950:intron 30.0%
TCTATCTCACTGTATTATGT+TGG - chr7_3:65000288-65000307 Msa1116950:intron 30.0%
TGATAACCTTTCTCTAATAG+AGG - chr7_3:65000354-65000373 Msa1116950:intron 30.0%
GATAACCTTTCTCTAATAGA+GGG - chr7_3:65000355-65000374 Msa1116950:intron 30.0%
ATAACCTTTCTCTAATAGAG+GGG - chr7_3:65000356-65000375 Msa1116950:intron 30.0%
GATCCTTTCATTATGTTCTT+CGG - chr7_3:65000488-65000507 Msa1116950:intron 30.0%
TTACCGAAGAACATAATGAA+AGG + chr7_3:65000494-65000513 None:intergenic 30.0%
CAAATCAAGAGACTAAAAAG+TGG + chr7_3:65000530-65000549 None:intergenic 30.0%
!! CACTTTTTAGTCTCTTGATT+TGG - chr7_3:65000528-65000547 Msa1116950:intron 30.0%
GTAAAAAAAGGTCAACAATC+AGG + chr7_3:65000718-65000737 None:intergenic 30.0%
GAGCATATCACAGTAAAAAA+AGG + chr7_3:65000730-65000749 None:intergenic 30.0%
! TGTGATATGCTCTGATATTT+TGG - chr7_3:65000738-65000757 Msa1116950:intron 30.0%
ATTTATATGCTAAACAAGGC+TGG + chr7_3:65000768-65000787 None:intergenic 30.0%
AATTGTTATGTGTAGTTTGG+CGG - chr7_3:65000965-65000984 Msa1116950:CDS 30.0%
!! AAAGTACTGCTTTCTAAGTT+TGG - chr7_3:65001106-65001125 Msa1116950:CDS 30.0%
!! TACGAGTTATTTTCATTGAC+TGG + chr7_3:65001156-65001175 None:intergenic 30.0%
CATGAATACTTGAGATTATG+AGG - chr7_3:65001439-65001458 Msa1116950:intron 30.0%
AGAAGATAATCCTTTCTCAT+CGG + chr7_3:65001499-65001518 None:intergenic 30.0%
TTTAATACTACCATCAGACA+AGG - chr7_3:65001531-65001550 Msa1116950:intron 30.0%
TTAATACTACCATCAGACAA+GGG - chr7_3:65001532-65001551 Msa1116950:intron 30.0%
! ACTTTTCAGCTTCAATTGTT+TGG - chr7_3:65001601-65001620 Msa1116950:intron 30.0%
!! CTTAAATGAAAGCACTAATG+TGG + chr7_3:65001627-65001646 None:intergenic 30.0%
GTATATTTCAGTAGGTATGT+AGG + chr7_3:65001683-65001702 None:intergenic 30.0%
! TAGGCATTGTATATTTCAGT+AGG + chr7_3:65001691-65001710 None:intergenic 30.0%
! TTCTTGTTCTTCTTTTGTGA+TGG + chr7_3:65001800-65001819 None:intergenic 30.0%
ACAAGAAAATTGACAGAGAA+AGG - chr7_3:65001813-65001832 Msa1116950:CDS 30.0%
CAAGAAAATTGACAGAGAAA+GGG - chr7_3:65001814-65001833 Msa1116950:CDS 30.0%
!!! TTTTTTCTTGTTGACCATCA+AGG + chr7_3:65001882-65001901 None:intergenic 30.0%
TGGTCAACAAGAAAAAAAGT+CGG - chr7_3:65001885-65001904 Msa1116950:CDS 30.0%
TTTCTTACACAAATTTCTGC+AGG - chr7_3:65001956-65001975 Msa1116950:intron 30.0%
AGTTCAACAAACTACATCTT+TGG + chr7_3:65002280-65002299 None:intergenic 30.0%
TAAAGATTTCTTAGTGGAAC+TGG + chr7_3:65002342-65002361 None:intergenic 30.0%
GCAATATCATAGTTTGATGT+AGG - chr7_3:65002401-65002420 Msa1116950:five_prime_UTR 30.0%
TTAGTATGGGATTCCTATTC+AGG - chr7_3:64997636-64997655 Msa1116950:three_prime_UTR 35.0%
! GTTGTTGTTGTTGTAAGACA+AGG + chr7_3:64997895-64997914 None:intergenic 35.0%
ACAACAACAACTTCATCTCA+AGG - chr7_3:64997904-64997923 Msa1116950:exon 35.0%
AAACTAACGCTGTGAATACA+AGG + chr7_3:64998106-64998125 None:intergenic 35.0%
!!! GCTAGTTTTGCTTAATAGTC+TGG - chr7_3:64998189-64998208 Msa1116950:CDS 35.0%
! AACGTTTTTGCCTTCTTCTT+TGG - chr7_3:64998282-64998301 Msa1116950:CDS 35.0%
GATAGACTTGGCTTAAGAAA+AGG + chr7_3:64998337-64998356 None:intergenic 35.0%
CGATGGAAACCCAAAATAAA+TGG - chr7_3:64998365-64998384 Msa1116950:CDS 35.0%
ATGTTAATTCCTCACCTCAA+TGG - chr7_3:64998410-64998429 Msa1116950:intron 35.0%
GGTTAGATGAAACATACCTT+GGG + chr7_3:64998452-64998471 None:intergenic 35.0%
TGGTTAGATGAAACATACCT+TGG + chr7_3:64998453-64998472 None:intergenic 35.0%
TCCGTGTCAATGAAACAAAT+TGG + chr7_3:64998744-64998763 None:intergenic 35.0%
! TAAAAGTACAGCATTTGAGC+AGG + chr7_3:64998879-64998898 None:intergenic 35.0%
! TGCTCAAATGCTGTACTTTT+AGG - chr7_3:64998878-64998897 Msa1116950:intron 35.0%
! AATGCTGTACTTTTAGGCTT+TGG - chr7_3:64998884-64998903 Msa1116950:intron 35.0%
! ATTTCAAAGCACCTAAAGTC+TGG - chr7_3:64998938-64998957 Msa1116950:intron 35.0%
TTGATGAAATTGCAGTTGTC+AGG - chr7_3:64999010-64999029 Msa1116950:intron 35.0%
GATGATGAAAATGGTTGTTG+AGG + chr7_3:64999046-64999065 None:intergenic 35.0%
TGAGGTCAAATTTGTCATCA+GGG + chr7_3:64999078-64999097 None:intergenic 35.0%
TTGAGGTCAAATTTGTCATC+AGG + chr7_3:64999079-64999098 None:intergenic 35.0%
CATGTCAAAGAGCTTACATA+AGG - chr7_3:64999231-64999250 Msa1116950:intron 35.0%
!! TGTTTTTACCTGCTGAAGTA+TGG + chr7_3:64999280-64999299 None:intergenic 35.0%
CAGCAACATGTATCAAATGA+TGG + chr7_3:64999638-64999657 None:intergenic 35.0%
! GCACAACTTCATTTTCTACT+AGG + chr7_3:64999667-64999686 None:intergenic 35.0%
GAAGTTAGGGAGAGAAATAA+TGG - chr7_3:64999753-64999772 Msa1116950:intron 35.0%
! GAGTTGTCTTCTATTTTCTC+TGG + chr7_3:64999829-64999848 None:intergenic 35.0%
ACAACTCATATCTGACTATC+TGG - chr7_3:64999842-64999861 Msa1116950:intron 35.0%
AATGCAAAATAAACCAGGGA+CGG + chr7_3:64999948-64999967 None:intergenic 35.0%
GGGTTAATGCAAAATAAACC+AGG + chr7_3:64999953-64999972 None:intergenic 35.0%
AATACACAAAATATGCGCAG+GGG + chr7_3:64999973-64999992 None:intergenic 35.0%
GAATACACAAAATATGCGCA+GGG + chr7_3:64999974-64999993 None:intergenic 35.0%
TGAATACACAAAATATGCGC+AGG + chr7_3:64999975-64999994 None:intergenic 35.0%
CTTCATTCTTTCTGATCATG+CGG + chr7_3:65000004-65000023 None:intergenic 35.0%
TGTATTATGTTGGCAACTGA+GGG - chr7_3:65000298-65000317 Msa1116950:intron 35.0%
ACATGTGCTGAGATTCTATA+TGG - chr7_3:65000581-65000600 Msa1116950:intron 35.0%
GAGATTCTATATGGACAGAA+TGG - chr7_3:65000590-65000609 Msa1116950:intron 35.0%
ATGGATATCAATGAAGCAGA+AGG - chr7_3:65000609-65000628 Msa1116950:intron 35.0%
CAACCTTAATTGCTCCTTTA+AGG - chr7_3:65000664-65000683 Msa1116950:intron 35.0%
ACTGCTTTCTAAGTTTGGTA+TGG - chr7_3:65001111-65001130 Msa1116950:CDS 35.0%
GCTATTCTTTGCAAGACAAA+TGG - chr7_3:65001345-65001364 Msa1116950:intron 35.0%
ATTCTTTGCAAGACAAATGG+AGG - chr7_3:65001348-65001367 Msa1116950:intron 35.0%
! CAAATGGAGGTTTTCTGTAA+AGG - chr7_3:65001361-65001380 Msa1116950:intron 35.0%
! GGTTTGAGTTTCACTTTCTT+AGG + chr7_3:65001779-65001798 None:intergenic 35.0%
TGTAAGAAACTCAGAAAGCT+CGG + chr7_3:65001945-65001964 None:intergenic 35.0%
TTACAGATAGTAGAACAGCA+AGG + chr7_3:65001997-65002016 None:intergenic 35.0%
! GTAATCTGTAAACTAGCTTG+TGG - chr7_3:65002013-65002032 Msa1116950:intron 35.0%
TGGTTCAGAAACTCGATAAA+AGG - chr7_3:65002182-65002201 Msa1116950:intron 35.0%
!! TTGGATCTCTAAAGTGATGA+TGG - chr7_3:65002306-65002325 Msa1116950:CDS 35.0%
TTCCAAAGTCGTTCAACCAA+TGG + chr7_3:64997672-64997691 None:intergenic 40.0%
CTCTGATTTCCTTCAGAAGA+TGG - chr7_3:64997826-64997845 Msa1116950:three_prime_UTR 40.0%
TTAACTTTCGGGGGAAAGTT+TGG - chr7_3:64998018-64998037 Msa1116950:CDS 40.0%
TAACTTTCGGGGGAAAGTTT+GGG - chr7_3:64998019-64998038 Msa1116950:CDS 40.0%
! AACGTTTGATAGTCCTGTCA+TGG + chr7_3:64998268-64998287 None:intergenic 40.0%
!!! TCTGGTTTTGCCAAAGAAGA+AGG + chr7_3:64998295-64998314 None:intergenic 40.0%
TTGGCTTAAGAAAAGGACAC+TGG + chr7_3:64998330-64998349 None:intergenic 40.0%
!!! ATTTTGGGTTTCCATCGACT+CGG + chr7_3:64998362-64998381 None:intergenic 40.0%
GCATATTGAATGCGTGTTAG+TGG - chr7_3:64998588-64998607 Msa1116950:intron 40.0%
ACTATCTTTACGCGATTCAG+CGG + chr7_3:64998966-64998985 None:intergenic 40.0%
AATACAGCAAAGGCTTCTTG+AGG + chr7_3:64999096-64999115 None:intergenic 40.0%
TATTAGAGTCGTATTTCGGC+AGG - chr7_3:64999470-64999489 Msa1116950:intron 40.0%
! CTATAGGAGTTCTAACCAAG+AGG - chr7_3:64999507-64999526 Msa1116950:CDS 40.0%
TTAAACTTGTAGCGGTGCAA+AGG - chr7_3:64999731-64999750 Msa1116950:intron 40.0%
! GAGAGAAATAATGGGAAAGC+AGG - chr7_3:64999762-64999781 Msa1116950:intron 40.0%
AATGCTCAGCCAAAAGAAGA+CGG - chr7_3:64999788-64999807 Msa1116950:intron 40.0%
GGACGGTTACAACTGAAATA+TGG + chr7_3:64999931-64999950 None:intergenic 40.0%
CTGTATTATGTTGGCAACTG+AGG - chr7_3:65000297-65000316 Msa1116950:intron 40.0%
GATTGCATCTTCACTGTAGA+TGG + chr7_3:65000645-65000664 None:intergenic 40.0%
CCTCCTTAAAGGAGCAATTA+AGG + chr7_3:65000670-65000689 None:intergenic 40.0%
! CCTTAATTGCTCCTTTAAGG+AGG - chr7_3:65000667-65000686 Msa1116950:intron 40.0%
CATAGTGCATACCTCCTTAA+AGG + chr7_3:65000681-65000700 None:intergenic 40.0%
TCACCACAGAAAGAAGAATG+TGG - chr7_3:65000855-65000874 Msa1116950:intron 40.0%
CACCACAGAAAGAAGAATGT+GGG - chr7_3:65000856-65000875 Msa1116950:intron 40.0%
! AGGTGTTATCGAATGCTTTG+AGG - chr7_3:65000909-65000928 Msa1116950:CDS 40.0%
! GGTGTTATCGAATGCTTTGA+GGG - chr7_3:65000910-65000929 Msa1116950:CDS 40.0%
! GTCTGCTTTGTTCTTGAGAA+TGG + chr7_3:65001199-65001218 None:intergenic 40.0%
GAATATCTGTCCGATGAGAA+AGG - chr7_3:65001486-65001505 Msa1116950:intron 40.0%
ACTTTCATACCCTTGTCTGA+TGG + chr7_3:65001544-65001563 None:intergenic 40.0%
! CAGACAAGGGTATGAAAGTA+TGG - chr7_3:65001545-65001564 Msa1116950:intron 40.0%
TGTTGACCATCAAGGACAAA+AGG + chr7_3:65001874-65001893 None:intergenic 40.0%
ATTCCTTCGCTGAAGAAATC+CGG - chr7_3:65001917-65001936 Msa1116950:intron 40.0%
GTAAGAAACTCAGAAAGCTC+GGG + chr7_3:65001944-65001963 None:intergenic 40.0%
! AAATTTCTGCAGGCATTGCT+GGG - chr7_3:65001966-65001985 Msa1116950:intron 40.0%
! TCTGTAAACTAGCTTGTGGA+AGG - chr7_3:65002017-65002036 Msa1116950:intron 40.0%
! CTGTAAACTAGCTTGTGGAA+GGG - chr7_3:65002018-65002037 Msa1116950:intron 40.0%
! TTCAATACCGGGTTAGGATT+TGG - chr7_3:65002064-65002083 Msa1116950:intron 40.0%
! TCAATACCGGGTTAGGATTT+GGG - chr7_3:65002065-65002084 Msa1116950:intron 40.0%
AACTAACCCAAATCCTAACC+CGG + chr7_3:65002074-65002093 None:intergenic 40.0%
!! GGTTAGGATTTGGGTTAGTT+TGG - chr7_3:65002074-65002093 Msa1116950:intron 40.0%
!! TTGGGTTAGTTTGGCTTTCT+TGG - chr7_3:65002083-65002102 Msa1116950:intron 40.0%
!! TGGGTTAGTTTGGCTTTCTT+GGG - chr7_3:65002084-65002103 Msa1116950:intron 40.0%
TTGGGCAGTAAGTAAGCTAA+GGG - chr7_3:65002102-65002121 Msa1116950:intron 40.0%
GAAGTTGGGTTTGAAAGAAG+AGG - chr7_3:65002156-65002175 Msa1116950:intron 40.0%
GGGTTTGAAAGAAGAGGAAA+TGG - chr7_3:65002162-65002181 Msa1116950:intron 40.0%
AGATATTTACTTCGGCTCTG+CGG - chr7_3:65002210-65002229 Msa1116950:intron 40.0%
!! TTGATGTAGGAAGCATTGCT+TGG - chr7_3:65002414-65002433 Msa1116950:five_prime_UTR 40.0%
AAAGTCGTTCAACCAATGGC+GGG + chr7_3:64997668-64997687 None:intergenic 45.0%
CAAAGTCGTTCAACCAATGG+CGG + chr7_3:64997669-64997688 None:intergenic 45.0%
TGTTGTTGTAAGACAAGGCC+TGG + chr7_3:64997890-64997909 None:intergenic 45.0%
AACTTTCGGGGGAAAGTTTG+GGG - chr7_3:64998020-64998039 Msa1116950:CDS 45.0%
TCAACTGATACAGGCCATTG+AGG + chr7_3:64998427-64998446 None:intergenic 45.0%
ATTCAGCGGTTCCAGACTTT+AGG + chr7_3:64998952-64998971 None:intergenic 45.0%
TGCTTGTTCCATACTTCAGC+AGG - chr7_3:64999269-64999288 Msa1116950:intron 45.0%
TATTTCGGCAGGTGAGGTAA+GGG - chr7_3:64999481-64999500 Msa1116950:intron 45.0%
! AGTTCTAACCAAGAGGCTCA+GGG - chr7_3:64999514-64999533 Msa1116950:CDS 45.0%
AAGTTCCTTTACCCTACAGC+AGG + chr7_3:64999707-64999726 None:intergenic 45.0%
GCTGTAGGGTAAAGGAACTT+AGG - chr7_3:64999707-64999726 Msa1116950:intron 45.0%
TAGCGGTGCAAAGGAAGTTA+GGG - chr7_3:64999740-64999759 Msa1116950:intron 45.0%
! TTTCTCTGGTTTCTTACCGG+AGG + chr7_3:64999815-64999834 None:intergenic 45.0%
ATTTCAGTTGTAACCGTCCC+TGG - chr7_3:64999932-64999951 Msa1116950:intron 45.0%
AGTGTATGTGTGTGTGTGTG+TGG + chr7_3:65000224-65000243 None:intergenic 45.0%
TTATGTTGGCAACTGAGGGA+TGG - chr7_3:65000302-65000321 Msa1116950:intron 45.0%
ACTGAGGGATGGCATTAAAC+AGG - chr7_3:65000313-65000332 Msa1116950:intron 45.0%
TGAGCCCCTCTATTAGAGAA+AGG + chr7_3:65000363-65000382 None:intergenic 45.0%
AGCCCACATTCTTCTTTCTG+TGG + chr7_3:65000861-65000880 None:intergenic 45.0%
CTGTGTTTCAGTGAGCTTCA+CGG - chr7_3:65001015-65001034 Msa1116950:CDS 45.0%
! GGAGCACTATCATATGCTAG+AGG - chr7_3:65001036-65001055 Msa1116950:CDS 45.0%
AGGTCAGACTACGAACAACT+TGG + chr7_3:65001663-65001682 None:intergenic 45.0%
! TGAGAGCCTTTTGTCCTTGA+TGG - chr7_3:65001865-65001884 Msa1116950:CDS 45.0%
! CAAATTTCTGCAGGCATTGC+TGG - chr7_3:65001965-65001984 Msa1116950:intron 45.0%
! TAACCCGGTATTGAACAAGC+TGG + chr7_3:65002059-65002078 None:intergenic 45.0%
! AGCTTGTTCAATACCGGGTT+AGG - chr7_3:65002058-65002077 Msa1116950:intron 45.0%
CTTGGGCAGTAAGTAAGCTA+AGG - chr7_3:65002101-65002120 Msa1116950:intron 45.0%
CTTGCTGATGCTGACAATTG+TGG + chr7_3:65002128-65002147 None:intergenic 45.0%
TCAGCATCAGCAAGAATGCA+GGG - chr7_3:65002134-65002153 Msa1116950:intron 45.0%
AGCAAGAATGCAGGGAAGTT+GGG - chr7_3:65002142-65002161 Msa1116950:intron 45.0%
! CGCCATTGGTTGAACGACTT+TGG - chr7_3:64997667-64997686 Msa1116950:three_prime_UTR 50.0%
GTCTCTGCACCATCTTCTGA+AGG + chr7_3:64997838-64997857 None:intergenic 50.0%
GTTGTAAGACAAGGCCTGGA+GGG + chr7_3:64997886-64997905 None:intergenic 50.0%
TGTTGTAAGACAAGGCCTGG+AGG + chr7_3:64997887-64997906 None:intergenic 50.0%
!! ATCGACTCGGCAGATAGACT+TGG + chr7_3:64998349-64998368 None:intergenic 50.0%
AAGTCTATCTGCCGAGTCGA+TGG - chr7_3:64998348-64998367 Msa1116950:CDS 50.0%
TGATACAGGCCATTGAGGTG+AGG + chr7_3:64998422-64998441 None:intergenic 50.0%
CCTTGGGTGTCAACTGATAC+AGG + chr7_3:64998436-64998455 None:intergenic 50.0%
CCTGTATCAGTTGACACCCA+AGG - chr7_3:64998433-64998452 Msa1116950:intron 50.0%
GTATTTCGGCAGGTGAGGTA+AGG - chr7_3:64999480-64999499 Msa1116950:intron 50.0%
! GAGTTCTAACCAAGAGGCTC+AGG - chr7_3:64999513-64999532 Msa1116950:CDS 50.0%
GTAGCGGTGCAAAGGAAGTT+AGG - chr7_3:64999739-64999758 Msa1116950:intron 50.0%
CGTGAAGCTCACTGAAACAC+AGG + chr7_3:65001017-65001036 None:intergenic 50.0%
AAACTCAGAAAGCTCGGGAC+CGG + chr7_3:65001939-65001958 None:intergenic 50.0%
! GCGTCCAGCTTGTTCAATAC+CGG - chr7_3:65002052-65002071 Msa1116950:intron 50.0%
! CGTCCAGCTTGTTCAATACC+GGG - chr7_3:65002053-65002072 Msa1116950:intron 50.0%
GTCAGCATCAGCAAGAATGC+AGG - chr7_3:65002133-65002152 Msa1116950:intron 50.0%
CAGCAAGAATGCAGGGAAGT+TGG - chr7_3:65002141-65002160 Msa1116950:intron 50.0%
GGGTAGGTATGAGAGGCCAT+CGG + chr7_3:64997866-64997885 None:intergenic 55.0%
TAAGACAAGGCCTGGAGGGT+AGG + chr7_3:64997882-64997901 None:intergenic 55.0%
CACTGGTAACTGAGCACGTC+TGG + chr7_3:64998313-64998332 None:intergenic 55.0%
GAGTCGTATTTCGGCAGGTG+AGG - chr7_3:64999475-64999494 Msa1116950:intron 55.0%
GGTGAGGTAAGGGAGGCTAT+AGG - chr7_3:64999491-64999510 Msa1116950:intron 55.0%
GGTTTGAACCCTGAGCCTCT+TGG + chr7_3:64999525-64999544 None:intergenic 55.0%
!! TGATAGCGGATGCCTGCTGT+AGG - chr7_3:64999692-64999711 Msa1116950:intron 55.0%
!! GATAGCGGATGCCTGCTGTA+GGG - chr7_3:64999693-64999712 Msa1116950:intron 55.0%
GGATGCCTGCTGTAGGGTAA+AGG - chr7_3:64999699-64999718 Msa1116950:intron 55.0%
GCCAAAAGAAGACGGTCCTC+CGG - chr7_3:64999796-64999815 Msa1116950:intron 55.0%
! ACCGGAGGACCGTCTTCTTT+TGG + chr7_3:64999800-64999819 None:intergenic 55.0%
GTCTGTGTGCGTGTGTATGC+TGG + chr7_3:65000192-65000211 None:intergenic 55.0%
GGACCGGATTTCTTCAGCGA+AGG + chr7_3:65001923-65001942 None:intergenic 55.0%
! TGGCGGGCATGAGCCTGAAT+AGG + chr7_3:64997652-64997671 None:intergenic 60.0%
TTCAGGCTCATGCCCGCCAT+TGG - chr7_3:64997653-64997672 Msa1116950:three_prime_UTR 60.0%
GGTGCAGAGACTGTGTCCGA+TGG - chr7_3:64997847-64997866 Msa1116950:three_prime_UTR 60.0%
GCCTCTCATACCTACCCTCC+AGG - chr7_3:64997869-64997888 Msa1116950:three_prime_UTR 60.0%
GCCTGGAGGGTAGGTATGAG+AGG + chr7_3:64997873-64997892 None:intergenic 60.0%
TTCGGCAGGTGAGGTAAGGG+AGG - chr7_3:64999484-64999503 Msa1116950:intron 60.0%
! TCTGCAGGCATTGCTGGGAC+AGG - chr7_3:65001971-65001990 Msa1116950:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 64997631 65002558 64997631 ID=Msa1116950;Name=Msa1116950
chr7_3 mRNA 64997631 65002558 64997631 ID=Msa1116950-mRNA-1;Parent=Msa1116950;Name=Msa1116950-mRNA-1;_AED=0.05;_eAED=0.05;_QI=214|0.6|0.83|0.83|1|1|6|291|442
chr7_3 exon 64997631 64998414 64997631 ID=Msa1116950-mRNA-1:exon:15444;Parent=Msa1116950-mRNA-1
chr7_3 exon 64999501 64999581 64999501 ID=Msa1116950-mRNA-1:exon:15443;Parent=Msa1116950-mRNA-1
chr7_3 exon 65000372 65000446 65000372 ID=Msa1116950-mRNA-1:exon:15442;Parent=Msa1116950-mRNA-1
chr7_3 exon 65000899 65001316 65000899 ID=Msa1116950-mRNA-1:exon:15441;Parent=Msa1116950-mRNA-1
chr7_3 exon 65001735 65001915 65001735 ID=Msa1116950-mRNA-1:exon:15440;Parent=Msa1116950-mRNA-1
chr7_3 exon 65002264 65002558 65002264 ID=Msa1116950-mRNA-1:exon:15439;Parent=Msa1116950-mRNA-1
chr7_3 five_prime_UTR 65002345 65002558 65002345 ID=Msa1116950-mRNA-1:five_prime_utr;Parent=Msa1116950-mRNA-1
chr7_3 CDS 65002264 65002344 65002264 ID=Msa1116950-mRNA-1:cds;Parent=Msa1116950-mRNA-1
chr7_3 CDS 65001735 65001915 65001735 ID=Msa1116950-mRNA-1:cds;Parent=Msa1116950-mRNA-1
chr7_3 CDS 65000899 65001316 65000899 ID=Msa1116950-mRNA-1:cds;Parent=Msa1116950-mRNA-1
chr7_3 CDS 65000372 65000446 65000372 ID=Msa1116950-mRNA-1:cds;Parent=Msa1116950-mRNA-1
chr7_3 CDS 64999501 64999581 64999501 ID=Msa1116950-mRNA-1:cds;Parent=Msa1116950-mRNA-1
chr7_3 CDS 64997922 64998414 64997922 ID=Msa1116950-mRNA-1:cds;Parent=Msa1116950-mRNA-1
chr7_3 three_prime_UTR 64997631 64997921 64997631 ID=Msa1116950-mRNA-1:three_prime_utr;Parent=Msa1116950-mRNA-1
Gene Sequence

>Msa1116950

ATGGTGCAGAGACTGTGTCCGATGGCCTCTCATACCTACCCTCCAGGCCTTGTCTTACAACAACAACAACTTCATCTCAAGGACTATCAAACGTTTTTGCCTTCTTCTTTGGCAAAACCAGACGTGCTCAGTTACCAGTGTCCTTTTCTTAAGCCAAGTCTATCTGCCGAGTCGATGGAAACCCAAAATAAATGGTTTGATGACAATCACTTTGTCAATGTTAATTCCTCACCTCAATGGCCTGTATCAGTTGACACCCAAGAATCCTGCTCAAATGCTGTACTTTTAGGCTTTGGCATTGTTGAACAATGCACTAAGCATGATAAAATTTCAAAGCACCTAAAGTCTGGAACCGCTGAATCGCGTAAAGATAGTGCAAACATATCCTTGATGTTAGACTTGATGAAATTGCAGTTGTCAGGCATTGATGAACCTCAACAACCATTTTCATCATCTCTTTTATACCCTGATGACAAATTTGACCTCAAGAAGCCTTTGCTGTATTTTCTTCAAGATTCAGCCTTTTCTTCAAAGATTACAGTTGATCTTGATGGTCAAATCACATTTATGGGTACTGAGATTCAGATGAAAGATCTTCTTTCTGTAGTTGCTGAGTCATACATGTCAAAGAGCTTACATAAGGTTGAAAAGCACTCAATGCTTGTTCCATACTTCAGCAGCGGTGCAAAGGAAGTTAGGGAGAGAAATAATGGGAAAGCAGGTCTAATGCTCAGCCAAAAGAAGACGGTCCTCCGAATGGATATCAATGAAGCAGAAGGACAGAGTCGTCCATCTACAGTGAAGATGCAATCAACCTTAATTGCTCCTTTAAGGAGTCCTAAGAAAGTGAAACTCAAACCATCACAAAAGAAGAACAAGAAAATTGACAGAGAAAGGGATCTCTACAAAAACTATTCACATGCATGTGAGAGCCTTTTGTCCTTGATGGTCAACAAGAAAAAAAGTCGGAAAACGATGATTCCTTCGCTGAAGAAATCCGGTCCCGAGCTTTCTGAGTTTCTTACACAAATTTCTGCAGGCATTGCTGGGACAGGCCTTGCTGTTCTACTATCTGTAATCTGTAAACTAGCTTGTGGAAGGGTTCTTCTTTCTGCGTCCAGCTTGTTCAATACCGGGTTAGGATTTGGGTTAGTTTGGCTTTCTTGGGCAGTAAGTAAGCTAAGGGCCACAATTGTCAGCATCAGCAAGAATGCAGGGAAGTTGGGTTTGAAAGAAGAGGAAATGGTTCAGAAACTCGATAAAAGGATTAGAGATATTTACTTCGGCTCTGCGGCATTGCTAGCAGTTGCAGTGCTAAGTATTGCTTGA

Protein sequence

>Msa1116950

MVQRLCPMASHTYPPGLVLQQQQLHLKDYQTFLPSSLAKPDVLSYQCPFLKPSLSAESMETQNKWFDDNHFVNVNSSPQWPVSVDTQESCSNAVLLGFGIVEQCTKHDKISKHLKSGTAESRKDSANISLMLDLMKLQLSGIDEPQQPFSSSLLYPDDKFDLKKPLLYFLQDSAFSSKITVDLDGQITFMGTEIQMKDLLSVVAESYMSKSLHKVEKHSMLVPYFSSGAKEVRERNNGKAGLMLSQKKTVLRMDINEAEGQSRPSTVKMQSTLIAPLRSPKKVKLKPSQKKNKKIDRERDLYKNYSHACESLLSLMVNKKKSRKTMIPSLKKSGPELSEFLTQISAGIAGTGLAVLLSVICKLACGRVLLSASSLFNTGLGFGLVWLSWAVSKLRATIVSISKNAGKLGLKEEEMVQKLDKRIRDIYFGSAALLAVAVLSIA*