Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655930 | XP_039685192.1 | 98.817 | 169 | 2 | 0 | 1 | 169 | 1 | 169 | 1.28e-118 | 349 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655930 | sp|Q39263|ZFP4_ARATH | 50.735 | 136 | 39 | 6 | 57 | 168 | 78 | 209 | 1.55e-32 | 123 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655930 | A0A396GPM5 | 98.817 | 169 | 2 | 0 | 1 | 169 | 1 | 169 | 6.09e-119 | 349 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0655930 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0616460 | Msa0655930 | 0.985193 | 8.248807e-163 | -8.615850e-47 |
| Msa0655930 | Msa0699790 | 0.954146 | 5.700220e-112 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655930 | MtrunA17_Chr8g0376021 | 98.817 | 169 | 2 | 0 | 1 | 169 | 1 | 169 | 1.17e-122 | 349 |
| Msa0655930 | MtrunA17_Chr1g0161901 | 53.365 | 208 | 57 | 8 | 1 | 169 | 2 | 208 | 2.35e-61 | 194 |
| Msa0655930 | MtrunA17_Chr3g0110091 | 49.324 | 148 | 71 | 3 | 21 | 168 | 47 | 190 | 6.45e-44 | 149 |
| Msa0655930 | MtrunA17_Chr5g0434121 | 49.682 | 157 | 71 | 5 | 17 | 167 | 39 | 193 | 7.25e-40 | 139 |
| Msa0655930 | MtrunA17_Chr2g0333741 | 66.667 | 81 | 21 | 2 | 59 | 133 | 78 | 158 | 7.46e-29 | 110 |
| Msa0655930 | MtrunA17_Chr1g0149811 | 38.194 | 144 | 63 | 3 | 15 | 132 | 37 | 180 | 4.11e-23 | 95.5 |
| Msa0655930 | MtrunA17_Chr4g0001081 | 40.426 | 141 | 66 | 4 | 2 | 136 | 6 | 134 | 1.42e-22 | 93.2 |
| Msa0655930 | MtrunA17_Chr1g0207691 | 45.192 | 104 | 49 | 3 | 46 | 149 | 51 | 146 | 3.31e-19 | 83.6 |
| Msa0655930 | MtrunA17_Chr3g0137111 | 50.562 | 89 | 26 | 4 | 61 | 132 | 71 | 158 | 9.76e-19 | 83.2 |
| Msa0655930 | MtrunA17_Chr4g0072571 | 65.517 | 58 | 18 | 1 | 62 | 119 | 45 | 100 | 1.54e-17 | 78.2 |
| Msa0655930 | MtrunA17_Chr4g0053691 | 47.368 | 76 | 26 | 2 | 57 | 132 | 62 | 123 | 6.14e-14 | 68.6 |
| Msa0655930 | MtrunA17_Chr3g0079221 | 50.794 | 63 | 31 | 0 | 227 | 289 | 5 | 67 | 1.13e-13 | 65.5 |
| Msa0655930 | MtrunA17_Chr7g0254221 | 58.000 | 50 | 19 | 1 | 51 | 98 | 20 | 69 | 4.82e-12 | 62.8 |
| Msa0655930 | MtrunA17_Chr7g0251581 | 68.421 | 38 | 12 | 0 | 57 | 94 | 34 | 71 | 8.74e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655930 | AT1G66140.1 | 50.735 | 136 | 39 | 6 | 57 | 168 | 78 | 209 | 1.58e-33 | 123 |
| Msa0655930 | AT1G80730.1 | 55.056 | 89 | 23 | 2 | 61 | 132 | 65 | 153 | 1.84e-24 | 99.0 |
| Msa0655930 | AT1G24625.1 | 47.107 | 121 | 43 | 5 | 59 | 173 | 54 | 159 | 9.50e-23 | 94.0 |
| Msa0655930 | AT5G25160.1 | 54.762 | 84 | 31 | 3 | 55 | 132 | 52 | 134 | 1.52e-21 | 91.3 |
| Msa0655930 | AT5G10970.1 | 41.985 | 131 | 66 | 5 | 11 | 132 | 46 | 175 | 1.96e-21 | 91.7 |
| Msa0655930 | AT5G57520.1 | 76.923 | 39 | 9 | 0 | 61 | 99 | 49 | 87 | 5.25e-16 | 73.9 |
| Msa0655930 | AT5G14010.1 | 72.222 | 36 | 10 | 0 | 62 | 97 | 36 | 71 | 6.22e-13 | 65.9 |
| Msa0655930 | AT5G01860.1 | 67.647 | 34 | 11 | 0 | 62 | 95 | 65 | 98 | 7.95e-11 | 61.2 |
Find 64 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTTGATAGAAACCATTT+TGG | 0.216847 | 4_3:-64927366 | Msa0655930:CDS |
| TTCGAGTGAGGCCGAGTTAA+TGG | 0.228364 | 4_3:-64927721 | Msa0655930:CDS |
| TTCGCAGCAGCTCTCATATC+TGG | 0.318459 | 4_3:+64927387 | None:intergenic |
| GCATGTTGAAGTTGTCTATA+GGG | 0.333306 | 4_3:-64923731 | Msa0655930:CDS |
| CTTGCATCTCTACCTCTTCA+TGG | 0.342785 | 4_3:-64927492 | Msa0655930:CDS |
| TCAGGTTCCAAGTTCAAGTT+TGG | 0.345240 | 4_3:+64927807 | None:intergenic |
| CGAAAACTAGCGATCCAAAA+TGG | 0.355731 | 4_3:+64927352 | None:intergenic |
| TGCAAGGCTTGTATACCTTT+CGG | 0.407124 | 4_3:+64927509 | None:intergenic |
| TGTCTACATAAGAGATGAAA+TGG | 0.420278 | 4_3:-64923542 | Msa0655930:CDS |
| GGCATGTTGAAGTTGTCTAT+AGG | 0.425631 | 4_3:-64923732 | Msa0655930:CDS |
| AGCTTCAATAAAGTAGGAAT+TGG | 0.428315 | 4_3:-64923565 | Msa0655930:CDS |
| TCGAGTGAGGCCGAGTTAAT+GGG | 0.432246 | 4_3:-64927720 | Msa0655930:CDS |
| GTCATCAGAACGCTCACAAA+AGG | 0.433204 | 4_3:-64927575 | Msa0655930:CDS |
| GGTCATAGGATCTAGATCTT+GGG | 0.441405 | 4_3:+64927767 | None:intergenic |
| GGGTCATAGGATCTAGATCT+TGG | 0.448749 | 4_3:+64927766 | None:intergenic |
| GGCTAAACGTGCAATGCGAA+TGG | 0.452909 | 4_3:-64927541 | Msa0655930:CDS |
| TTCTATAGCTCGCAAGCATT+AGG | 0.456033 | 4_3:-64927600 | Msa0655930:CDS |
| GATGACTCCAAACTTGAACT+TGG | 0.465674 | 4_3:-64927814 | Msa0655930:CDS |
| AGTGATGCTAGTAGTGAAGT+AGG | 0.485652 | 4_3:-64927693 | Msa0655930:CDS |
| AATCCATACTTCCGGAATTG+AGG | 0.500625 | 4_3:+64924654 | None:intergenic |
| TAATTACAAGAGAATATCCT+TGG | 0.504702 | 4_3:+64927636 | None:intergenic |
| GGACGCAACCACTTCATTTG+AGG | 0.505288 | 4_3:+64923634 | None:intergenic |
| TCTAGGAATGCAAAGTTGAA+TGG | 0.511144 | 4_3:-64923753 | Msa0655930:intron |
| GGCAGAAGCAGAGGAGCAAT+GGG | 0.513812 | 4_3:-64923667 | Msa0655930:CDS |
| AGTGTCAAGTCAAGGGTCAT+AGG | 0.518887 | 4_3:+64927753 | None:intergenic |
| GGGCAGAAGCAGAGGAGCAA+TGG | 0.524300 | 4_3:-64923668 | Msa0655930:CDS |
| GAATAATGTTAATAGAAGAA+TGG | 0.528397 | 4_3:-64923708 | Msa0655930:CDS |
| TCTACAAGCTTCAATAAAGT+AGG | 0.530671 | 4_3:-64923571 | Msa0655930:CDS |
| TCTCTTGTAATTACTGCAAG+AGG | 0.530679 | 4_3:-64927626 | Msa0655930:CDS |
| GCTAAACGTGCAATGCGAAT+GGG | 0.536618 | 4_3:-64927540 | Msa0655930:CDS |
| AGGAAGGAATCACTATGGAC+TGG | 0.542809 | 4_3:-64924746 | Msa0655930:CDS |
| TGGATAGAAGCTAGAACGGT+GGG | 0.545301 | 4_3:-64923688 | Msa0655930:CDS |
| TGAAATTGAGTGTCAAGTCA+AGG | 0.555713 | 4_3:+64927745 | None:intergenic |
| TTACCAGGAAGGAATCACTA+TGG | 0.558404 | 4_3:-64924751 | Msa0655930:intron |
| AAGCAGAGGAGCAATGGGTA+TGG | 0.558685 | 4_3:-64923662 | Msa0655930:CDS |
| TCATCAGAACGCTCACAAAA+GGG | 0.564572 | 4_3:-64927574 | Msa0655930:CDS |
| TCAACACCAAGGGACCGAAA+AGG | 0.568839 | 4_3:+64927465 | None:intergenic |
| AGAACGGTGGGCAGAAGCAG+AGG | 0.570484 | 4_3:-64923676 | Msa0655930:CDS |
| GAAATTGAGTGTCAAGTCAA+GGG | 0.590766 | 4_3:+64927746 | None:intergenic |
| GTCATAGGATCTAGATCTTG+GGG | 0.590838 | 4_3:+64927768 | None:intergenic |
| TGGTAAATCCTCAAATGAAG+TGG | 0.591816 | 4_3:-64923642 | Msa0655930:CDS |
| CATGTTGAAGTTGTCTATAG+GGG | 0.596490 | 4_3:-64923730 | Msa0655930:CDS |
| CTTCGCCATCGGTAACTCCA+AGG | 0.598331 | 4_3:-64927653 | Msa0655930:CDS |
| TGCAACCATCGTCAACAATG+AGG | 0.600965 | 4_3:-64927413 | Msa0655930:CDS |
| TTCGTGGAAGATGATGATGT+AGG | 0.604810 | 4_3:-64927333 | Msa0655930:intron |
| GCAACCATCGTCAACAATGA+GGG | 0.605847 | 4_3:-64927412 | Msa0655930:CDS |
| ACTCAATTTCAGTTCGAGTG+AGG | 0.611871 | 4_3:-64927733 | Msa0655930:CDS |
| TGAAGTTCATGCTTCGCCAT+CGG | 0.612721 | 4_3:-64927664 | Msa0655930:CDS |
| ATCACTTGAACCCATTAACT+CGG | 0.613671 | 4_3:+64927710 | None:intergenic |
| AGAATGGATAGAAGCTAGAA+CGG | 0.614590 | 4_3:-64923692 | Msa0655930:CDS |
| AGAACGCTCACAAAAGGGAG+AGG | 0.635123 | 4_3:-64927569 | Msa0655930:CDS |
| CAGAATGAGCTTCAACACCA+AGG | 0.638470 | 4_3:+64927454 | None:intergenic |
| ATGGATAGAAGCTAGAACGG+TGG | 0.638817 | 4_3:-64923689 | Msa0655930:CDS |
| CATGAAGAGGTAGAGATGCA+AGG | 0.640521 | 4_3:+64927493 | None:intergenic |
| AATATCCTTGGAGTTACCGA+TGG | 0.642699 | 4_3:+64927648 | None:intergenic |
| GGAAGGAATCACTATGGACT+GGG | 0.645819 | 4_3:-64924745 | Msa0655930:CDS |
| GAATGGGAATGTTCACCGAA+AGG | 0.647190 | 4_3:-64927524 | Msa0655930:CDS |
| CGAAAAGGCGAACCATGAAG+AGG | 0.651068 | 4_3:+64927480 | None:intergenic |
| AGAATGAGCTTCAACACCAA+GGG | 0.655962 | 4_3:+64927455 | None:intergenic |
| TATAGCTCGCAAGCATTAGG+CGG | 0.663928 | 4_3:-64927597 | Msa0655930:CDS |
| GGAGCCCTCATTGTTGACGA+TGG | 0.667173 | 4_3:+64927408 | None:intergenic |
| TCACAAAAGGGAGAGGACGA+TGG | 0.689083 | 4_3:-64927562 | Msa0655930:CDS |
| AAGTGGTTGCGTCCTCCACG+AGG | 0.692583 | 4_3:-64923625 | Msa0655930:CDS |
| TCGTTGGAGCTAAAACAGTG+TGG | 0.704637 | 4_3:-64923513 | Msa0655930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAAAATAATAATTTTTA+TGG | + | chr4_3:64927006-64927025 | None:intergenic | 0.0% |
| !!! | AAATTATTATTTTAATAAAA+AGG | - | chr4_3:64927009-64927028 | Msa0655930:intron | 0.0% |
| !!! | TTATTATTATTTTTTATGAG+GGG | - | chr4_3:64924398-64924417 | Msa0655930:intron | 10.0% |
| !! | ATTTAATAATTGAAAAGAAA+AGG | - | chr4_3:64925271-64925290 | Msa0655930:intron | 10.0% |
| !!! | TAATACAATATTTTATTTTC+AGG | + | chr4_3:64927356-64927375 | None:intergenic | 10.0% |
| !!! | GATTTGATTTAAATTTATTT+GGG | - | chr4_3:64927384-64927403 | Msa0655930:CDS | 10.0% |
| !! | AAGGTGAAATTAAAATAAAA+AGG | + | chr4_3:64924578-64924597 | None:intergenic | 15.0% |
| !! | ATTAGAAGAAAACATTAATA+AGG | + | chr4_3:64924597-64924616 | None:intergenic | 15.0% |
| !! | TTGGTTACAAAAAATAAAAA+AGG | + | chr4_3:64926053-64926072 | None:intergenic | 15.0% |
| !!! | AAAAAAGATCTAATTCTTTT+GGG | + | chr4_3:64926418-64926437 | None:intergenic | 15.0% |
| !!! | AAAAAAAGATCTAATTCTTT+TGG | + | chr4_3:64926419-64926438 | None:intergenic | 15.0% |
| !!! | TTTTAATAATAGTACCTAAT+AGG | - | chr4_3:64926885-64926904 | Msa0655930:intron | 15.0% |
| !! | TTGTGGAAAAAAAAAATTAA+GGG | + | chr4_3:64927090-64927109 | None:intergenic | 15.0% |
| !! | ATTGTGGAAAAAAAAAATTA+AGG | + | chr4_3:64927091-64927110 | None:intergenic | 15.0% |
| !!! | TTAATTTTTTTTTTCCACAA+TGG | - | chr4_3:64927090-64927109 | Msa0655930:intron | 15.0% |
| !!! | TAATTTTTTTTTTCCACAAT+GGG | - | chr4_3:64927091-64927110 | Msa0655930:intron | 15.0% |
| !!! | CGATTTGATTTAAATTTATT+TGG | - | chr4_3:64927383-64927402 | Msa0655930:CDS | 15.0% |
| !! | TTAAAAAATATGTCAATTCA+AGG | - | chr4_3:64927451-64927470 | Msa0655930:CDS | 15.0% |
| !!! | AAATTTGATAGAAACCATTT+TGG | - | chr4_3:64923957-64923976 | Msa0655930:intron | 20.0% |
| !! | ATCTTAAGATTATTTGTCTT+TGG | - | chr4_3:64924463-64924482 | Msa0655930:intron | 20.0% |
| !!! | CTATTTTGCTAAACTTAATA+GGG | + | chr4_3:64924662-64924681 | None:intergenic | 20.0% |
| !! | CTATTAAGTTTAGCAAAATA+GGG | - | chr4_3:64924661-64924680 | Msa0655930:intron | 20.0% |
| !!! | TTTATTTTTTTCTCTCTATC+AGG | + | chr4_3:64925133-64925152 | None:intergenic | 20.0% |
| !! | AATTAATAAACAAAGATGAG+TGG | + | chr4_3:64925247-64925266 | None:intergenic | 20.0% |
| !! | ATAATTGAAAAGAAAAGGAA+CGG | - | chr4_3:64925276-64925295 | Msa0655930:intron | 20.0% |
| !! | ATATATATTTATAGCCTACA+GGG | - | chr4_3:64925959-64925978 | Msa0655930:intron | 20.0% |
| !! | AAATGCAATGATATTTGTTT+GGG | + | chr4_3:64926123-64926142 | None:intergenic | 20.0% |
| !! | AAAATGCAATGATATTTGTT+TGG | + | chr4_3:64926124-64926143 | None:intergenic | 20.0% |
| !!! | ACAAATATCATTGCATTTTT+TGG | - | chr4_3:64926125-64926144 | Msa0655930:intron | 20.0% |
| !!! | ATTTTAATAAAAAGGTGATG+TGG | - | chr4_3:64927017-64927036 | Msa0655930:intron | 20.0% |
| !!! | TTTTAATAAAAAGGTGATGT+GGG | - | chr4_3:64927018-64927037 | Msa0655930:intron | 20.0% |
| !! | CATTGTTCAATGTATTATTA+TGG | + | chr4_3:64927190-64927209 | None:intergenic | 20.0% |
| !!! | AAGTTCTTTTTCATATTTTG+TGG | - | chr4_3:64927474-64927493 | Msa0655930:CDS | 20.0% |
| !! | GAATAATGTTAATAGAAGAA+TGG | - | chr4_3:64927615-64927634 | Msa0655930:CDS | 20.0% |
| ! | TAATTACAAGAGAATATCCT+TGG | + | chr4_3:64923690-64923709 | None:intergenic | 25.0% |
| ! | ATATCCTCAAACTTCAAATT+CGG | - | chr4_3:64924070-64924089 | Msa0655930:intron | 25.0% |
| ! | TAAAAAGGTAAAATCGCTAT+TGG | + | chr4_3:64924563-64924582 | None:intergenic | 25.0% |
| !! | CCTATTTTGCTAAACTTAAT+AGG | + | chr4_3:64924663-64924682 | None:intergenic | 25.0% |
| ! | CCTATTAAGTTTAGCAAAAT+AGG | - | chr4_3:64924660-64924679 | Msa0655930:intron | 25.0% |
| ! | AATGAGAAAACAAAGATATG+TGG | - | chr4_3:64924985-64925004 | Msa0655930:intron | 25.0% |
| ! | AGAGAGAAAAAAATAAAGAG+TGG | - | chr4_3:64925136-64925155 | Msa0655930:intron | 25.0% |
| ! | AAGAGAAATGCATGAAAAAT+AGG | - | chr4_3:64925433-64925452 | Msa0655930:intron | 25.0% |
| ! | AGAGAAATGCATGAAAAATA+GGG | - | chr4_3:64925434-64925453 | Msa0655930:intron | 25.0% |
| ! | ATGAAAAATAGGGTCTTAAA+TGG | - | chr4_3:64925444-64925463 | Msa0655930:intron | 25.0% |
| ! | TGAAAAATAGGGTCTTAAAT+GGG | - | chr4_3:64925445-64925464 | Msa0655930:intron | 25.0% |
| !!! | GTTTTTTGGGTAATTATACT+TGG | + | chr4_3:64925491-64925510 | None:intergenic | 25.0% |
| !!! | ACCTACTATTAGTGTTTTTT+GGG | + | chr4_3:64925504-64925523 | None:intergenic | 25.0% |
| !!! | AACCTACTATTAGTGTTTTT+TGG | + | chr4_3:64925505-64925524 | None:intergenic | 25.0% |
| ! | AAAAACACTAATAGTAGGTT+TGG | - | chr4_3:64925505-64925524 | Msa0655930:intron | 25.0% |
| !!! | GTTAGGAAATTTTTTTACCA+TGG | - | chr4_3:64925622-64925641 | Msa0655930:intron | 25.0% |
| !! | ATAATAAGTTTGTTCTTGTC+TGG | + | chr4_3:64925865-64925884 | None:intergenic | 25.0% |
| ! | CATATATATTTATAGCCTAC+AGG | - | chr4_3:64925958-64925977 | Msa0655930:intron | 25.0% |
| ! | TTAATATTAAATGTCCCTGT+AGG | + | chr4_3:64925976-64925995 | None:intergenic | 25.0% |
| !! | ATATGGCAATTTTCTTCTTT+TGG | + | chr4_3:64926072-64926091 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTCTTAGATGAAG+TGG | - | chr4_3:64926210-64926229 | Msa0655930:intron | 25.0% |
| ! | ATTATTCAGAATTAGATCTG+TGG | - | chr4_3:64926444-64926463 | Msa0655930:intron | 25.0% |
| ! | TTATTCAGAATTAGATCTGT+GGG | - | chr4_3:64926445-64926464 | Msa0655930:intron | 25.0% |
| !!! | GGATTTTTTTATGAAATAGG+AGG | + | chr4_3:64926636-64926655 | None:intergenic | 25.0% |
| !!! | CAGGGATTTTTTTATGAAAT+AGG | + | chr4_3:64926639-64926658 | None:intergenic | 25.0% |
| ! | AATTGAGGTAAAAAAAGTCA+GGG | + | chr4_3:64926657-64926676 | None:intergenic | 25.0% |
| ! | TCTCAAAGTAGAAAATCATA+TGG | - | chr4_3:64926711-64926730 | Msa0655930:intron | 25.0% |
| ! | CTCAAAGTAGAAAATCATAT+GGG | - | chr4_3:64926712-64926731 | Msa0655930:intron | 25.0% |
| ! | TTAAGACCTCATTCTTAAAT+GGG | + | chr4_3:64927044-64927063 | None:intergenic | 25.0% |
| ! | ATTAAGACCTCATTCTTAAA+TGG | + | chr4_3:64927045-64927064 | None:intergenic | 25.0% |
| TATCCTCAAACTTCAAATTC+GGG | - | chr4_3:64924071-64924090 | Msa0655930:intron | 30.0% | |
| ATTTGAGAGATGATACAAAC+TGG | - | chr4_3:64924162-64924181 | Msa0655930:intron | 30.0% | |
| TTTGAGAGATGATACAAACT+GGG | - | chr4_3:64924163-64924182 | Msa0655930:intron | 30.0% | |
| !! | AAACCATTTTTATGAGGTGT+CGG | - | chr4_3:64924188-64924207 | Msa0655930:intron | 30.0% |
| ! | ATTTTACGACTGTCCATAAA+GGG | + | chr4_3:64924262-64924281 | None:intergenic | 30.0% |
| ! | CCAACTCATTATTTTCTCAA+GGG | + | chr4_3:64924317-64924336 | None:intergenic | 30.0% |
| ! | ACCAACTCATTATTTTCTCA+AGG | + | chr4_3:64924318-64924337 | None:intergenic | 30.0% |
| ! | TTGAGAAAATAATGAGTTGG+TGG | - | chr4_3:64924317-64924336 | Msa0655930:intron | 30.0% |
| ! | AATGAGTGATTGAGCAATTT+TGG | + | chr4_3:64924379-64924398 | None:intergenic | 30.0% |
| AGATAAATGATACAAGCACT+TGG | + | chr4_3:64924447-64924466 | None:intergenic | 30.0% | |
| TGTCTAAATAAATGCATCTC+TGG | - | chr4_3:64924701-64924720 | Msa0655930:CDS | 30.0% | |
| GAACTCAAACCAAACAAAAT+CGG | + | chr4_3:64924766-64924785 | None:intergenic | 30.0% | |
| AGACTGTTTAATGGAAAACT+TGG | - | chr4_3:64924818-64924837 | Msa0655930:intron | 30.0% | |
| ! | ATTGGCTAAAGACTCTTTTA+AGG | - | chr4_3:64924922-64924941 | Msa0655930:intron | 30.0% |
| !!! | AGACTCTTTTAAGGTTTGAA+AGG | - | chr4_3:64924931-64924950 | Msa0655930:intron | 30.0% |
| !!! | GACTCTTTTAAGGTTTGAAA+GGG | - | chr4_3:64924932-64924951 | Msa0655930:intron | 30.0% |
| ! | TTTCTCATTTTCATGTCCTT+GGG | + | chr4_3:64924974-64924993 | None:intergenic | 30.0% |
| ! | TTTTCTCATTTTCATGTCCT+TGG | + | chr4_3:64924975-64924994 | None:intergenic | 30.0% |
| TGTACACTACTGCATTAAAA+CGG | - | chr4_3:64925046-64925065 | Msa0655930:intron | 30.0% | |
| GATATAAGGACACAAAAAGA+TGG | - | chr4_3:64925083-64925102 | Msa0655930:intron | 30.0% | |
| !! | TATGTTGGTAATGTGATAGA+AGG | - | chr4_3:64925177-64925196 | Msa0655930:intron | 30.0% |
| !! | ATGTTGGTAATGTGATAGAA+GGG | - | chr4_3:64925178-64925197 | Msa0655930:intron | 30.0% |
| ACCCAAAAAACACTAATAGT+AGG | - | chr4_3:64925500-64925519 | Msa0655930:intron | 30.0% | |
| ! | AAAAAAAAACGCGTCCTTTT+CGG | + | chr4_3:64926190-64926209 | None:intergenic | 30.0% |
| !!! | ACACGTTTTAATTGGGTAAT+GGG | - | chr4_3:64926342-64926361 | Msa0655930:intron | 30.0% |
| GAATTGAGGTAAAAAAAGTC+AGG | + | chr4_3:64926658-64926677 | None:intergenic | 30.0% | |
| !!! | GACTTTTTTTACCTCAATTC+CGG | - | chr4_3:64926658-64926677 | Msa0655930:intron | 30.0% |
| TCATATGGGTTTGAATTTCA+AGG | - | chr4_3:64926726-64926745 | Msa0655930:intron | 30.0% | |
| !!! | GGATTGGTTTTTCCTTAAAA+AGG | - | chr4_3:64926747-64926766 | Msa0655930:intron | 30.0% |
| ! | GGTTTTTCCTTAAAAAGGAT+CGG | - | chr4_3:64926752-64926771 | Msa0655930:intron | 30.0% |
| ! | GTTTTTCCTTAAAAAGGATC+GGG | - | chr4_3:64926753-64926772 | Msa0655930:intron | 30.0% |
| ! | TTTTTCCTTAAAAAGGATCG+GGG | - | chr4_3:64926754-64926773 | Msa0655930:intron | 30.0% |
| !! | TCATCTTTGAGGTCTTAAAT+GGG | - | chr4_3:64926831-64926850 | Msa0655930:intron | 30.0% |
| CTCTAACAAAAGGTCTAATT+GGG | - | chr4_3:64926927-64926946 | Msa0655930:intron | 30.0% | |
| ATGCATAAATATCGCAATCT+AGG | - | chr4_3:64927553-64927572 | Msa0655930:CDS | 30.0% | |
| ! | TTACACTTTAAAAAACCTCG+TGG | + | chr4_3:64927716-64927735 | None:intergenic | 30.0% |
| TCTACAAGCTTCAATAAAGT+AGG | - | chr4_3:64927752-64927771 | Msa0655930:CDS | 30.0% | |
| AGCTTCAATAAAGTAGGAAT+TGG | - | chr4_3:64927758-64927777 | Msa0655930:CDS | 30.0% | |
| TGTCTACATAAGAGATGAAA+TGG | - | chr4_3:64927781-64927800 | Msa0655930:CDS | 30.0% | |
| GAAATTGAGTGTCAAGTCAA+GGG | + | chr4_3:64923580-64923599 | None:intergenic | 35.0% | |
| TGAAATTGAGTGTCAAGTCA+AGG | + | chr4_3:64923581-64923600 | None:intergenic | 35.0% | |
| ATCACTTGAACCCATTAACT+CGG | + | chr4_3:64923616-64923635 | None:intergenic | 35.0% | |
| TCTCTTGTAATTACTGCAAG+AGG | - | chr4_3:64923697-64923716 | Msa0655930:CDS | 35.0% | |
| !! | ATGATGATGTAGGTAGCTTT+TGG | - | chr4_3:64924000-64924019 | Msa0655930:intron | 35.0% |
| CTATATTAACACTTCCTCCT+TGG | + | chr4_3:64924049-64924068 | None:intergenic | 35.0% | |
| !! | CAAGGAGGAAGTGTTAATAT+AGG | - | chr4_3:64924047-64924066 | Msa0655930:intron | 35.0% |
| ! | AAACCCGAATTTGAAGTTTG+AGG | + | chr4_3:64924077-64924096 | None:intergenic | 35.0% |
| !!! | AAATTCGGGTTTTGTTCCAA+TGG | - | chr4_3:64924085-64924104 | Msa0655930:intron | 35.0% |
| TATAGCTTCAGTGTAAGATC+AGG | + | chr4_3:64924140-64924159 | None:intergenic | 35.0% | |
| TTGAGAGATGATACAAACTG+GGG | - | chr4_3:64924164-64924183 | Msa0655930:intron | 35.0% | |
| !! | TGGGGTAAACCATTTTTATG+AGG | - | chr4_3:64924182-64924201 | Msa0655930:intron | 35.0% |
| ACAGAGTTCAAATCCCTTTA+TGG | - | chr4_3:64924246-64924265 | Msa0655930:intron | 35.0% | |
| ! | CATTTTACGACTGTCCATAA+AGG | + | chr4_3:64924263-64924282 | None:intergenic | 35.0% |
| CTTTATGGACAGTCGTAAAA+TGG | - | chr4_3:64924261-64924280 | Msa0655930:intron | 35.0% | |
| ACAGTCGTAAAATGGTCAAT+AGG | - | chr4_3:64924269-64924288 | Msa0655930:intron | 35.0% | |
| CCCTTGAGAAAATAATGAGT+TGG | - | chr4_3:64924314-64924333 | Msa0655930:intron | 35.0% | |
| ACAGCAATCATCAACAATGA+TGG | + | chr4_3:64924631-64924650 | None:intergenic | 35.0% | |
| ATATATAGTACCGTGAGATG+TGG | - | chr4_3:64924729-64924748 | Msa0655930:CDS | 35.0% | |
| !! | TAAACAGTCTTTCTGAGGTA+AGG | + | chr4_3:64924808-64924827 | None:intergenic | 35.0% |
| ACCTCAGAAAGACTGTTTAA+TGG | - | chr4_3:64924809-64924828 | Msa0655930:intron | 35.0% | |
| TCCATTAAACAGTCTTTCTG+AGG | + | chr4_3:64924813-64924832 | None:intergenic | 35.0% | |
| AGAGTCTTTAGCCAATATTG+TGG | + | chr4_3:64924918-64924937 | None:intergenic | 35.0% | |
| CAGTAGTGTACATAGATTGA+TGG | + | chr4_3:64925038-64925057 | None:intergenic | 35.0% | |
| AAGGAATGACAGTGGATATA+AGG | - | chr4_3:64925069-64925088 | Msa0655930:intron | 35.0% | |
| ! | TTTTCTCTCTATCAGGTGTA+TGG | + | chr4_3:64925126-64925145 | None:intergenic | 35.0% |
| ATCTAATAGCGGTGATATGT+TGG | - | chr4_3:64925162-64925181 | Msa0655930:intron | 35.0% | |
| ATAAACAAAGATGAGTGGAC+TGG | + | chr4_3:64925242-64925261 | None:intergenic | 35.0% | |
| ! | CCAATGAGGTTTTTAATGGA+GGG | + | chr4_3:64925321-64925340 | None:intergenic | 35.0% |
| ! | TCCAATGAGGTTTTTAATGG+AGG | + | chr4_3:64925322-64925341 | None:intergenic | 35.0% |
| ! | CTCTCCAATGAGGTTTTTAA+TGG | + | chr4_3:64925325-64925344 | None:intergenic | 35.0% |
| ! | TCTCTCTAGTGTTTCTATCA+CGG | + | chr4_3:64925357-64925376 | None:intergenic | 35.0% |
| TAGGTTTGGATACATGTTTC+AGG | - | chr4_3:64925519-64925538 | Msa0655930:intron | 35.0% | |
| !! | CTTTTGAGTAATCGTGTGTT+AGG | - | chr4_3:64925605-64925624 | Msa0655930:intron | 35.0% |
| TTAGTACTCGTTTGATTCCA+TGG | + | chr4_3:64925642-64925661 | None:intergenic | 35.0% | |
| TGAATAATGCATACCATCCA+TGG | - | chr4_3:64925713-64925732 | Msa0655930:intron | 35.0% | |
| !! | AAGTTTTATCGCTAGGTTCT+TGG | + | chr4_3:64925745-64925764 | None:intergenic | 35.0% |
| !! | TGTGTGTAAGTTTTATCGCT+AGG | + | chr4_3:64925752-64925771 | None:intergenic | 35.0% |
| ATTTACTTTCTCGGGAGATA+TGG | + | chr4_3:64926089-64926108 | None:intergenic | 35.0% | |
| GCAATGATATTTGTTTGGGA+AGG | + | chr4_3:64926119-64926138 | None:intergenic | 35.0% | |
| !! | GTGTGTGAGTTTATTTTCAG+TGG | + | chr4_3:64926240-64926259 | None:intergenic | 35.0% |
| !! | AGGAAAGGACACGTTTTAAT+TGG | - | chr4_3:64926334-64926353 | Msa0655930:intron | 35.0% |
| !!! | GGAAAGGACACGTTTTAATT+GGG | - | chr4_3:64926335-64926354 | Msa0655930:intron | 35.0% |
| !!! | GACACGTTTTAATTGGGTAA+TGG | - | chr4_3:64926341-64926360 | Msa0655930:intron | 35.0% |
| !! | TAATTGGGTAATGGGTGTAT+CGG | - | chr4_3:64926350-64926369 | Msa0655930:intron | 35.0% |
| ! | TTATTTCAATGCTGCTTACC+AGG | - | chr4_3:64926557-64926576 | Msa0655930:intron | 35.0% |
| !! | AATTCCGGAAGTATGGATTT+TGG | - | chr4_3:64926673-64926692 | Msa0655930:intron | 35.0% |
| !! | ATTCCGGAAGTATGGATTTT+GGG | - | chr4_3:64926674-64926693 | Msa0655930:intron | 35.0% |
| TGGGTTTGAATTTCAAGGAT+TGG | - | chr4_3:64926731-64926750 | Msa0655930:intron | 35.0% | |
| !! | CTCATCTTTGAGGTCTTAAA+TGG | - | chr4_3:64926830-64926849 | Msa0655930:intron | 35.0% |
| ! | CCAATTAGACCTTTTGTTAG+AGG | + | chr4_3:64926929-64926948 | None:intergenic | 35.0% |
| CCTCTAACAAAAGGTCTAAT+TGG | - | chr4_3:64926926-64926945 | Msa0655930:intron | 35.0% | |
| ! | TTTAAGACCTGGTACCTAAT+AGG | + | chr4_3:64927121-64927140 | None:intergenic | 35.0% |
| ! | GAGTCTAAACATTTAAGACC+TGG | + | chr4_3:64927132-64927151 | None:intergenic | 35.0% |
| ! | TTGAACAATGAACTTGCTTC+TGG | - | chr4_3:64927200-64927219 | Msa0655930:intron | 35.0% |
| AAATGTTAACTAGTACCCCT+GGG | - | chr4_3:64927407-64927426 | Msa0655930:CDS | 35.0% | |
| TCTAGGAATGCAAAGTTGAA+TGG | - | chr4_3:64927570-64927589 | Msa0655930:CDS | 35.0% | |
| GCATGTTGAAGTTGTCTATA+GGG | - | chr4_3:64927592-64927611 | Msa0655930:CDS | 35.0% | |
| CATGTTGAAGTTGTCTATAG+GGG | - | chr4_3:64927593-64927612 | Msa0655930:CDS | 35.0% | |
| AGAATGGATAGAAGCTAGAA+CGG | - | chr4_3:64927631-64927650 | Msa0655930:CDS | 35.0% | |
| TGGTAAATCCTCAAATGAAG+TGG | - | chr4_3:64927681-64927700 | Msa0655930:CDS | 35.0% | |
| ! | GATGAAATGGAGTTTTTCGT+TGG | - | chr4_3:64927794-64927813 | Msa0655930:CDS | 35.0% |
| GATGACTCCAAACTTGAACT+TGG | - | chr4_3:64923509-64923528 | Msa0655930:CDS | 40.0% | |
| ! | TCAGGTTCCAAGTTCAAGTT+TGG | + | chr4_3:64923519-64923538 | None:intergenic | 40.0% |
| GTCATAGGATCTAGATCTTG+GGG | + | chr4_3:64923558-64923577 | None:intergenic | 40.0% | |
| GGTCATAGGATCTAGATCTT+GGG | + | chr4_3:64923559-64923578 | None:intergenic | 40.0% | |
| ACTCAATTTCAGTTCGAGTG+AGG | - | chr4_3:64923590-64923609 | Msa0655930:CDS | 40.0% | |
| AGTGATGCTAGTAGTGAAGT+AGG | - | chr4_3:64923630-64923649 | Msa0655930:CDS | 40.0% | |
| AATATCCTTGGAGTTACCGA+TGG | + | chr4_3:64923678-64923697 | None:intergenic | 40.0% | |
| TTCTATAGCTCGCAAGCATT+AGG | - | chr4_3:64923723-64923742 | Msa0655930:CDS | 40.0% | |
| TCATCAGAACGCTCACAAAA+GGG | - | chr4_3:64923749-64923768 | Msa0655930:CDS | 40.0% | |
| TGCAAGGCTTGTATACCTTT+CGG | + | chr4_3:64923817-64923836 | None:intergenic | 40.0% | |
| AGAATGAGCTTCAACACCAA+GGG | + | chr4_3:64923871-64923890 | None:intergenic | 40.0% | |
| CGAAAACTAGCGATCCAAAA+TGG | + | chr4_3:64923974-64923993 | None:intergenic | 40.0% | |
| !!! | TTTTGGATCGCTAGTTTTCG+TGG | - | chr4_3:64923974-64923993 | Msa0655930:intron | 40.0% |
| ! | TTCGTGGAAGATGATGATGT+AGG | - | chr4_3:64923990-64924009 | Msa0655930:intron | 40.0% |
| GAACCGACACCTCATAAAAA+TGG | + | chr4_3:64924194-64924213 | None:intergenic | 40.0% | |
| GAGCTTGACTATGTAACTTC+AGG | - | chr4_3:64924223-64924242 | Msa0655930:intron | 40.0% | |
| AGGGGTTTATGACTTTGTGA+AGG | - | chr4_3:64924416-64924435 | Msa0655930:intron | 40.0% | |
| !! | CAAAGTGGACCGATTTTGTT+TGG | - | chr4_3:64924754-64924773 | Msa0655930:intron | 40.0% |
| ! | GACAAGAATCTAGAACCACT+GGG | + | chr4_3:64924889-64924908 | None:intergenic | 40.0% |
| !! | TGGTTCTAGATTCTTGTCCA+TGG | - | chr4_3:64924891-64924910 | Msa0655930:intron | 40.0% |
| TTGTCCATGGACCACAATAT+TGG | - | chr4_3:64924904-64924923 | Msa0655930:intron | 40.0% | |
| TTAGCCAATATTGTGGTCCA+TGG | + | chr4_3:64924911-64924930 | None:intergenic | 40.0% | |
| CACTACTGCATTAAAACGGA+AGG | - | chr4_3:64925050-64925069 | Msa0655930:intron | 40.0% | |
| TAAAACGGAAGGAATGACAG+TGG | - | chr4_3:64925061-64925080 | Msa0655930:intron | 40.0% | |
| AAGAGTGGTCGATCTAATAG+CGG | - | chr4_3:64925151-64925170 | Msa0655930:intron | 40.0% | |
| !! | TTGGTAATGTGATAGAAGGG+AGG | - | chr4_3:64925181-64925200 | Msa0655930:intron | 40.0% |
| CCCTCCATTAAAAACCTCAT+TGG | - | chr4_3:64925318-64925337 | Msa0655930:intron | 40.0% | |
| CACACGATTACTCAAAAGCT+AGG | + | chr4_3:64925603-64925622 | None:intergenic | 40.0% | |
| TTCTTGGAACATTCCATGGA+TGG | + | chr4_3:64925729-64925748 | None:intergenic | 40.0% | |
| TAGGTTCTTGGAACATTCCA+TGG | + | chr4_3:64925733-64925752 | None:intergenic | 40.0% | |
| TCTGGTAAGTGTAGCTCATA+TGG | + | chr4_3:64925847-64925866 | None:intergenic | 40.0% | |
| GCTTCGCTATTTACTTTCTC+GGG | + | chr4_3:64926097-64926116 | None:intergenic | 40.0% | |
| GGCTTCGCTATTTACTTTCT+CGG | + | chr4_3:64926098-64926117 | None:intergenic | 40.0% | |
| AAGGAGGAGAGAGAAAATTC+AGG | + | chr4_3:64926162-64926181 | None:intergenic | 40.0% | |
| TAAACTCACACACAACTGTG+AGG | - | chr4_3:64926247-64926266 | Msa0655930:intron | 40.0% | |
| TGACAAATGCCGAAATTGCA+AGG | + | chr4_3:64926293-64926312 | None:intergenic | 40.0% | |
| !! | AATTGGGTAATGGGTGTATC+GGG | - | chr4_3:64926351-64926370 | Msa0655930:intron | 40.0% |
| TTACCAGGAAGGAATCACTA+TGG | - | chr4_3:64926572-64926591 | Msa0655930:intron | 40.0% | |
| TTACCTCAATTCCGGAAGTA+TGG | - | chr4_3:64926666-64926685 | Msa0655930:intron | 40.0% | |
| AATCCATACTTCCGGAATTG+AGG | + | chr4_3:64926672-64926691 | None:intergenic | 40.0% | |
| !! | TTCCGGAAGTATGGATTTTG+GGG | - | chr4_3:64926675-64926694 | Msa0655930:intron | 40.0% |
| AAAGATGAGAGTCTCCATTG+TGG | + | chr4_3:64926819-64926838 | None:intergenic | 40.0% | |
| AATGGAGACTCTCATCTTTG+AGG | - | chr4_3:64926820-64926839 | Msa0655930:intron | 40.0% | |
| ! | TTTTGTTAGAGGATCTCCAG+TGG | + | chr4_3:64926918-64926937 | None:intergenic | 40.0% |
| ACTGGAGATCCTCTAACAAA+AGG | - | chr4_3:64926917-64926936 | Msa0655930:intron | 40.0% | |
| ATGTTTAGACTCTCCCATTG+TGG | - | chr4_3:64927140-64927159 | Msa0655930:intron | 40.0% | |
| GAAATGTTAACTAGTACCCC+TGG | - | chr4_3:64927406-64927425 | Msa0655930:CDS | 40.0% | |
| GGAAACTTACTCGCGATAAT+AGG | - | chr4_3:64927495-64927514 | Msa0655930:CDS | 40.0% | |
| GGCATGTTGAAGTTGTCTAT+AGG | - | chr4_3:64927591-64927610 | Msa0655930:CDS | 40.0% | |
| ! | CACTTTAAAAAACCTCGTGG+AGG | + | chr4_3:64927713-64927732 | None:intergenic | 40.0% |
| !! | GGTGCTTCTGACTGATTTTC+AGG | + | chr4_3:64923537-64923556 | None:intergenic | 45.0% |
| GGGTCATAGGATCTAGATCT+TGG | + | chr4_3:64923560-64923579 | None:intergenic | 45.0% | |
| AGTGTCAAGTCAAGGGTCAT+AGG | + | chr4_3:64923573-64923592 | None:intergenic | 45.0% | |
| TGAAGTTCATGCTTCGCCAT+CGG | - | chr4_3:64923659-64923678 | Msa0655930:CDS | 45.0% | |
| TATAGCTCGCAAGCATTAGG+CGG | - | chr4_3:64923726-64923745 | Msa0655930:CDS | 45.0% | |
| GTCATCAGAACGCTCACAAA+AGG | - | chr4_3:64923748-64923767 | Msa0655930:CDS | 45.0% | |
| GCTAAACGTGCAATGCGAAT+GGG | - | chr4_3:64923783-64923802 | Msa0655930:intron | 45.0% | |
| GAATGGGAATGTTCACCGAA+AGG | - | chr4_3:64923799-64923818 | Msa0655930:intron | 45.0% | |
| CATGAAGAGGTAGAGATGCA+AGG | + | chr4_3:64923833-64923852 | None:intergenic | 45.0% | |
| CTTGCATCTCTACCTCTTCA+TGG | - | chr4_3:64923831-64923850 | Msa0655930:intron | 45.0% | |
| ! | CTCTTCATGGTTCGCCTTTT+CGG | - | chr4_3:64923844-64923863 | Msa0655930:intron | 45.0% |
| CAGAATGAGCTTCAACACCA+AGG | + | chr4_3:64923872-64923891 | None:intergenic | 45.0% | |
| TGCAACCATCGTCAACAATG+AGG | - | chr4_3:64923910-64923929 | Msa0655930:intron | 45.0% | |
| GCAACCATCGTCAACAATGA+GGG | - | chr4_3:64923911-64923930 | Msa0655930:intron | 45.0% | |
| ! | TCCACCTGTCTAAAACTTCC+GGG | + | chr4_3:64924026-64924045 | None:intergenic | 45.0% |
| ! | GTCCACCTGTCTAAAACTTC+CGG | + | chr4_3:64924027-64924046 | None:intergenic | 45.0% |
| !!! | AGTTTTAGACAGGTGGACCA+AGG | - | chr4_3:64924029-64924048 | Msa0655930:intron | 45.0% |
| !! | TTATGAGGTGTCGGTTCAAG+TGG | - | chr4_3:64924197-64924216 | Msa0655930:intron | 45.0% |
| !! | GAGTTGGTGGTTGTAAGAAG+TGG | - | chr4_3:64924330-64924349 | Msa0655930:intron | 45.0% |
| CCACTTTGAACCACATCTCA+CGG | + | chr4_3:64924742-64924761 | None:intergenic | 45.0% | |
| AGAACCACTGGGACTTTACT+TGG | + | chr4_3:64924878-64924897 | None:intergenic | 45.0% | |
| ! | GGACAAGAATCTAGAACCAC+TGG | + | chr4_3:64924890-64924909 | None:intergenic | 45.0% |
| ACAAAGATATGTGGACCACG+TGG | - | chr4_3:64924994-64925013 | Msa0655930:intron | 45.0% | |
| GGAACGGCAAAGATTAACAC+TGG | - | chr4_3:64925292-64925311 | Msa0655930:intron | 45.0% | |
| AACCTCATTGGAGAGAATCC+TGG | - | chr4_3:64925330-64925349 | Msa0655930:intron | 45.0% | |
| ! | TAGTGTTTCTATCACGGACC+AGG | + | chr4_3:64925351-64925370 | None:intergenic | 45.0% |
| GAGAGTGATCGATCTAGTAG+AGG | - | chr4_3:64925387-64925406 | Msa0655930:intron | 45.0% | |
| CTCCTCCTTGTATTCCGAAA+AGG | - | chr4_3:64926173-64926192 | Msa0655930:intron | 45.0% | |
| ! | GTCCTTTTCGGAATACAAGG+AGG | + | chr4_3:64926178-64926197 | None:intergenic | 45.0% |
| AAATGCCGAAATTGCAAGGC+CGG | + | chr4_3:64926289-64926308 | None:intergenic | 45.0% | |
| TTGAGCTAGGACTTCTAGAC+AGG | - | chr4_3:64926314-64926333 | Msa0655930:intron | 45.0% | |
| CTAGGACTTCTAGACAGGAA+AGG | - | chr4_3:64926319-64926338 | Msa0655930:intron | 45.0% | |
| TGGGTGTATCGGGATGATTT+CGG | - | chr4_3:64926361-64926380 | Msa0655930:intron | 45.0% | |
| TCTCGTCGCGTTATATAGCA+TGG | - | chr4_3:64926390-64926409 | Msa0655930:intron | 45.0% | |
| ! | TTCAATGCTGCTTACCAGGA+AGG | - | chr4_3:64926561-64926580 | Msa0655930:intron | 45.0% |
| AGTCCATAGTGATTCCTTCC+TGG | + | chr4_3:64926578-64926597 | None:intergenic | 45.0% | |
| AGGAAGGAATCACTATGGAC+TGG | - | chr4_3:64926577-64926596 | Msa0655930:intron | 45.0% | |
| GGAAGGAATCACTATGGACT+GGG | - | chr4_3:64926578-64926597 | Msa0655930:intron | 45.0% | |
| !!! | CACTATGGACTGGGTCTTTT+AGG | - | chr4_3:64926587-64926606 | Msa0655930:intron | 45.0% |
| !! | ACTGGGTCTTTTAGGTGCAA+AGG | - | chr4_3:64926595-64926614 | Msa0655930:intron | 45.0% |
| !! | CTGGGTCTTTTAGGTGCAAA+GGG | - | chr4_3:64926596-64926615 | Msa0655930:intron | 45.0% |
| !! | TCCGGAAGTATGGATTTTGG+GGG | - | chr4_3:64926676-64926695 | Msa0655930:intron | 45.0% |
| TTCCTTAAAAAGGATCGGGG+CGG | - | chr4_3:64926757-64926776 | Msa0655930:intron | 45.0% | |
| ! | ATGCTCTGAGTGGACAACAA+GGG | + | chr4_3:64926796-64926815 | None:intergenic | 45.0% |
| CCAGTGGTTGAGTACCTATT+AGG | + | chr4_3:64926902-64926921 | None:intergenic | 45.0% | |
| CCTAATAGGTACTCAACCAC+TGG | - | chr4_3:64926899-64926918 | Msa0655930:intron | 45.0% | |
| TGTGGGCCCATTTAAGAATG+AGG | - | chr4_3:64927035-64927054 | Msa0655930:intron | 45.0% | |
| CCTAATAGGTACTCCCATTG+TGG | + | chr4_3:64927107-64927126 | None:intergenic | 45.0% | |
| !! | CCACAATGGGAGTACCTATT+AGG | - | chr4_3:64927104-64927123 | Msa0655930:intron | 45.0% |
| !! | CACATGAGAGCATCCACAAT+GGG | + | chr4_3:64927156-64927175 | None:intergenic | 45.0% |
| !! | ACACATGAGAGCATCCACAA+TGG | + | chr4_3:64927157-64927176 | None:intergenic | 45.0% |
| CTACAACGCTGTAGAGTTTG+TGG | - | chr4_3:64927528-64927547 | Msa0655930:CDS | 45.0% | |
| ATGGATAGAAGCTAGAACGG+TGG | - | chr4_3:64927634-64927653 | Msa0655930:CDS | 45.0% | |
| TGGATAGAAGCTAGAACGGT+GGG | - | chr4_3:64927635-64927654 | Msa0655930:CDS | 45.0% | |
| TCGTTGGAGCTAAAACAGTG+TGG | - | chr4_3:64927810-64927829 | Msa0655930:CDS | 45.0% | |
| !!! | ATTTATTATTATTTTTTATG+AGG | - | chr4_3:64924396-64924415 | Msa0655930:intron | 5.0% |
| !!! | TTTATTATTATTTTTTATGA+GGG | - | chr4_3:64924397-64924416 | Msa0655930:intron | 5.0% |
| !! | ATTAAATAAATAATATTGAT+GGG | + | chr4_3:64926954-64926973 | None:intergenic | 5.0% |
| !! | TATTAAATAAATAATATTGA+TGG | + | chr4_3:64926955-64926974 | None:intergenic | 5.0% |
| !!! | TTAATTTTAATTTGATATAA+TGG | - | chr4_3:64927309-64927328 | Msa0655930:intron | 5.0% |
| TTCGAGTGAGGCCGAGTTAA+TGG | - | chr4_3:64923602-64923621 | Msa0655930:CDS | 50.0% | |
| TCGAGTGAGGCCGAGTTAAT+GGG | - | chr4_3:64923603-64923622 | Msa0655930:CDS | 50.0% | |
| AGAACGCTCACAAAAGGGAG+AGG | - | chr4_3:64923754-64923773 | Msa0655930:intron | 50.0% | |
| TCACAAAAGGGAGAGGACGA+TGG | - | chr4_3:64923761-64923780 | Msa0655930:intron | 50.0% | |
| GGCTAAACGTGCAATGCGAA+TGG | - | chr4_3:64923782-64923801 | Msa0655930:intron | 50.0% | |
| CGAAAAGGCGAACCATGAAG+AGG | + | chr4_3:64923846-64923865 | None:intergenic | 50.0% | |
| TCAACACCAAGGGACCGAAA+AGG | + | chr4_3:64923861-64923880 | None:intergenic | 50.0% | |
| TTCGCAGCAGCTCTCATATC+TGG | + | chr4_3:64923939-64923958 | None:intergenic | 50.0% | |
| ! | GATGTAGGTAGCTTTTGGCC+CGG | - | chr4_3:64924005-64924024 | Msa0655930:intron | 50.0% |
| !!! | TTGGCCCGGAAGTTTTAGAC+AGG | - | chr4_3:64924019-64924038 | Msa0655930:intron | 50.0% |
| TTTAGACAGGTGGACCAAGG+AGG | - | chr4_3:64924032-64924051 | Msa0655930:intron | 50.0% | |
| TCAGGAGATGCAGATGCTTG+AGG | + | chr4_3:64924122-64924141 | None:intergenic | 50.0% | |
| CCGTGAGATGTGGTTCAAAG+TGG | - | chr4_3:64924739-64924758 | Msa0655930:CDS | 50.0% | |
| GCTACCAAGTAAAGTCCCAG+TGG | - | chr4_3:64924871-64924890 | Msa0655930:intron | 50.0% | |
| CATGTGCATCTTCAACCACG+TGG | + | chr4_3:64925012-64925031 | None:intergenic | 50.0% | |
| !! | ATGAGTGGACTGGATTCCAC+TGG | + | chr4_3:64925232-64925251 | None:intergenic | 50.0% |
| GACCAGGATTCTCTCCAATG+AGG | + | chr4_3:64925335-64925354 | None:intergenic | 50.0% | |
| ! | CGCGTCCTTTTCGGAATACA+AGG | + | chr4_3:64926181-64926200 | None:intergenic | 50.0% |
| CGGCATTTGTCAGTTGAGCT+AGG | - | chr4_3:64926301-64926320 | Msa0655930:intron | 50.0% | |
| GGGTGTATCGGGATGATTTC+GGG | - | chr4_3:64926362-64926381 | Msa0655930:intron | 50.0% | |
| CCCCCCAAAATCCATACTTC+CGG | + | chr4_3:64926680-64926699 | None:intergenic | 50.0% | |
| !! | CCGGAAGTATGGATTTTGGG+GGG | - | chr4_3:64926677-64926696 | Msa0655930:intron | 50.0% |
| ! | GATGCTCTGAGTGGACAACA+AGG | + | chr4_3:64926797-64926816 | None:intergenic | 50.0% |
| ! | TCCACTCAGAGCATCCACAA+TGG | - | chr4_3:64926802-64926821 | Msa0655930:intron | 50.0% |
| ! | TCCATTGTGGATGCTCTGAG+TGG | + | chr4_3:64926806-64926825 | None:intergenic | 50.0% |
| !! | GGGAGTACCTATTAGGTACC+AGG | - | chr4_3:64927111-64927130 | Msa0655930:intron | 50.0% |
| AATGTCCAACCAGTGTCCCA+GGG | + | chr4_3:64927426-64927445 | None:intergenic | 50.0% | |
| AAATGTCCAACCAGTGTCCC+AGG | + | chr4_3:64927427-64927446 | None:intergenic | 50.0% | |
| AAGCAGAGGAGCAATGGGTA+TGG | - | chr4_3:64927661-64927680 | Msa0655930:CDS | 50.0% | |
| GGACGCAACCACTTCATTTG+AGG | + | chr4_3:64927692-64927711 | None:intergenic | 50.0% | |
| CTTCGCCATCGGTAACTCCA+AGG | - | chr4_3:64923670-64923689 | Msa0655930:CDS | 55.0% | |
| GGAGCCCTCATTGTTGACGA+TGG | + | chr4_3:64923918-64923937 | None:intergenic | 55.0% | |
| !!! | GCCCGGAAGTTTTAGACAGG+TGG | - | chr4_3:64924022-64924041 | Msa0655930:intron | 55.0% |
| GATGCAGATGCTTGAGGTGG+AGG | + | chr4_3:64924116-64924135 | None:intergenic | 55.0% | |
| GGAGATGCAGATGCTTGAGG+TGG | + | chr4_3:64924119-64924138 | None:intergenic | 55.0% | |
| ! | TTGAAAGGGCGTAGCAGCGT+AGG | - | chr4_3:64924946-64924965 | Msa0655930:intron | 55.0% |
| !! | GTGGACTGGATTCCACTGGA+CGG | + | chr4_3:64925228-64925247 | None:intergenic | 55.0% |
| CACACACAACTGTGAGGTCC+CGG | - | chr4_3:64926253-64926272 | Msa0655930:intron | 55.0% | |
| ACACACAACTGTGAGGTCCC+GGG | - | chr4_3:64926254-64926273 | Msa0655930:intron | 55.0% | |
| GACGTCCGGCCTTGCAATTT+CGG | - | chr4_3:64926281-64926300 | Msa0655930:intron | 55.0% | |
| ! | CACCGCCCCGATCCTTTTTA+AGG | + | chr4_3:64926762-64926781 | None:intergenic | 55.0% |
| AACTAGTACCCCTGGGACAC+TGG | - | chr4_3:64927414-64927433 | Msa0655930:CDS | 55.0% | |
| ATGTCCAACCAGTGTCCCAG+GGG | + | chr4_3:64927425-64927444 | None:intergenic | 55.0% | |
| GGCAGAAGCAGAGGAGCAAT+GGG | - | chr4_3:64927656-64927675 | Msa0655930:CDS | 55.0% | |
| ! | GGTTCGCCTTTTCGGTCCCT+TGG | - | chr4_3:64923852-64923871 | Msa0655930:intron | 60.0% |
| !! | TGAGGTGGAGGAGGTGCCAT+TGG | + | chr4_3:64924104-64924123 | None:intergenic | 60.0% |
| GCAGATGCTTGAGGTGGAGG+AGG | + | chr4_3:64924113-64924132 | None:intergenic | 60.0% | |
| AGTACCCCTGGGACACTGGT+TGG | - | chr4_3:64927418-64927437 | Msa0655930:CDS | 60.0% | |
| AGAACGGTGGGCAGAAGCAG+AGG | - | chr4_3:64927647-64927666 | Msa0655930:CDS | 60.0% | |
| GGGCAGAAGCAGAGGAGCAA+TGG | - | chr4_3:64927655-64927674 | Msa0655930:CDS | 60.0% | |
| AAGTGGTTGCGTCCTCCACG+AGG | - | chr4_3:64927698-64927717 | Msa0655930:CDS | 60.0% | |
| CGTAGCAGCGTAGGTGCCCA+AGG | - | chr4_3:64924955-64924974 | Msa0655930:intron | 65.0% | |
| GGACGGTGCAGTGACAGGAG+AGG | + | chr4_3:64925211-64925230 | None:intergenic | 65.0% | |
| CCACTGGACGGTGCAGTGAC+AGG | + | chr4_3:64925216-64925235 | None:intergenic | 65.0% | |
| CCTGTCACTGCACCGTCCAG+TGG | - | chr4_3:64925213-64925232 | Msa0655930:intron | 65.0% | |
| AGGTCCCGGGTCACGACGTC+CGG | - | chr4_3:64926267-64926286 | Msa0655930:intron | 70.0% | |
| AAGGCCGGACGTCGTGACCC+GGG | + | chr4_3:64926274-64926293 | None:intergenic | 70.0% | |
| CAAGGCCGGACGTCGTGACC+CGG | + | chr4_3:64926275-64926294 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 64923507 | 64927838 | 64923507 | ID=Msa0655930;Name=Msa0655930 |
| chr4_3 | mRNA | 64923507 | 64927838 | 64923507 | ID=Msa0655930-mRNA-1;Parent=Msa0655930;Name=Msa0655930-mRNA-1;_AED=0.45;_eAED=0.45;_QI=0|0|0|0.66|1|1|3|0|290 |
| chr4_3 | exon | 64927334 | 64927838 | 64927334 | ID=Msa0655930-mRNA-1:exon:18399;Parent=Msa0655930-mRNA-1 |
| chr4_3 | exon | 64924663 | 64924766 | 64924663 | ID=Msa0655930-mRNA-1:exon:18398;Parent=Msa0655930-mRNA-1 |
| chr4_3 | exon | 64923507 | 64923770 | 64923507 | ID=Msa0655930-mRNA-1:exon:18397;Parent=Msa0655930-mRNA-1 |
| chr4_3 | CDS | 64927334 | 64927838 | 64927334 | ID=Msa0655930-mRNA-1:cds;Parent=Msa0655930-mRNA-1 |
| chr4_3 | CDS | 64924663 | 64924766 | 64924663 | ID=Msa0655930-mRNA-1:cds;Parent=Msa0655930-mRNA-1 |
| chr4_3 | CDS | 64923507 | 64923770 | 64923507 | ID=Msa0655930-mRNA-1:cds;Parent=Msa0655930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
