Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656850 | XP_003629671.2 | 98.194 | 443 | 5 | 1 | 1 | 440 | 1 | 443 | 0.0 | 894 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656850 | sp|Q8R3D1|TBC13_MOUSE | 35.433 | 381 | 193 | 11 | 103 | 436 | 23 | 397 | 5.64e-62 | 209 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0656850 | Msa1420700 | 0.924640 | 5.373492e-90 | -8.615850e-47 |
| Msa0142070 | Msa0656850 | 0.868262 | 7.440549e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656850 | MtrunA17_Chr8g0378291 | 98.194 | 443 | 5 | 1 | 1 | 440 | 1 | 443 | 0.0 | 894 |
| Msa0656850 | MtrunA17_Chr3g0121451 | 71.136 | 440 | 119 | 2 | 1 | 440 | 1 | 432 | 0.0 | 644 |
| Msa0656850 | MtrunA17_Chr4g0063771 | 61.134 | 247 | 95 | 1 | 187 | 432 | 48 | 294 | 4.42e-109 | 324 |
| Msa0656850 | MtrunA17_Chr4g0033831 | 25.946 | 370 | 205 | 8 | 71 | 427 | 116 | 429 | 1.52e-27 | 114 |
| Msa0656850 | MtrunA17_Chr2g0329691 | 26.316 | 342 | 183 | 8 | 96 | 424 | 134 | 419 | 3.43e-25 | 107 |
| Msa0656850 | MtrunA17_Chr1g0183581 | 29.054 | 296 | 162 | 10 | 106 | 387 | 68 | 329 | 2.96e-24 | 104 |
| Msa0656850 | MtrunA17_Chr4g0064141 | 27.160 | 324 | 168 | 11 | 99 | 417 | 351 | 611 | 2.04e-22 | 100 |
| Msa0656850 | MtrunA17_Chr4g0041821 | 27.682 | 289 | 176 | 9 | 104 | 379 | 54 | 322 | 2.88e-20 | 92.8 |
| Msa0656850 | MtrunA17_Chr2g0319591 | 26.712 | 292 | 178 | 8 | 104 | 379 | 55 | 326 | 2.52e-18 | 87.0 |
| Msa0656850 | MtrunA17_Chr2g0329651 | 30.189 | 159 | 88 | 5 | 223 | 379 | 378 | 515 | 4.45e-15 | 77.8 |
| Msa0656850 | MtrunA17_Chr1g0146661 | 25.405 | 185 | 101 | 6 | 248 | 412 | 387 | 554 | 4.75e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656850 | AT4G13730.1 | 67.136 | 426 | 110 | 4 | 39 | 438 | 28 | 449 | 0.0 | 596 |
| Msa0656850 | AT1G04830.1 | 63.087 | 447 | 150 | 3 | 1 | 436 | 1 | 443 | 0.0 | 583 |
| Msa0656850 | AT4G13730.3 | 65.728 | 426 | 105 | 5 | 39 | 438 | 28 | 438 | 0.0 | 577 |
| Msa0656850 | AT1G04830.2 | 62.557 | 438 | 149 | 3 | 1 | 427 | 1 | 434 | 0.0 | 568 |
| Msa0656850 | AT4G13730.2 | 65.067 | 375 | 101 | 4 | 39 | 387 | 28 | 398 | 2.85e-178 | 504 |
| Msa0656850 | AT1G04830.3 | 56.376 | 447 | 137 | 4 | 1 | 436 | 1 | 400 | 1.16e-172 | 490 |
| Msa0656850 | AT2G30710.1 | 27.616 | 344 | 180 | 8 | 96 | 426 | 126 | 413 | 3.07e-27 | 113 |
| Msa0656850 | AT4G28550.3 | 28.620 | 297 | 182 | 9 | 101 | 394 | 57 | 326 | 3.10e-25 | 106 |
| Msa0656850 | AT4G28550.2 | 29.181 | 281 | 169 | 9 | 101 | 378 | 57 | 310 | 1.14e-24 | 104 |
| Msa0656850 | AT4G28550.1 | 29.078 | 282 | 170 | 9 | 101 | 379 | 57 | 311 | 2.47e-24 | 105 |
| Msa0656850 | AT2G20440.3 | 27.083 | 288 | 168 | 10 | 101 | 379 | 57 | 311 | 1.60e-23 | 101 |
| Msa0656850 | AT2G20440.1 | 27.083 | 288 | 168 | 10 | 101 | 379 | 57 | 311 | 4.82e-23 | 101 |
| Msa0656850 | AT2G20440.2 | 27.083 | 288 | 168 | 10 | 101 | 379 | 57 | 311 | 4.82e-23 | 101 |
| Msa0656850 | AT2G20440.4 | 31.677 | 161 | 92 | 4 | 219 | 379 | 53 | 195 | 1.65e-18 | 86.3 |
| Msa0656850 | AT4G27100.1 | 27.986 | 293 | 165 | 10 | 104 | 379 | 54 | 317 | 9.59e-18 | 85.5 |
| Msa0656850 | AT4G27100.2 | 27.986 | 293 | 165 | 10 | 104 | 379 | 54 | 317 | 1.01e-17 | 85.5 |
| Msa0656850 | AT5G52580.3 | 26.000 | 200 | 127 | 6 | 220 | 417 | 445 | 625 | 1.91e-16 | 82.4 |
| Msa0656850 | AT5G52580.2 | 26.000 | 200 | 127 | 6 | 220 | 417 | 456 | 636 | 1.96e-16 | 82.4 |
| Msa0656850 | AT5G54780.1 | 31.579 | 171 | 96 | 5 | 217 | 384 | 171 | 323 | 2.06e-16 | 81.3 |
| Msa0656850 | AT5G52580.1 | 26.000 | 200 | 127 | 6 | 220 | 417 | 439 | 619 | 2.09e-16 | 82.0 |
| Msa0656850 | AT3G59570.1 | 27.473 | 182 | 107 | 7 | 223 | 400 | 369 | 529 | 1.28e-14 | 76.6 |
| Msa0656850 | AT3G59570.3 | 27.473 | 182 | 107 | 7 | 223 | 400 | 369 | 529 | 1.42e-14 | 76.6 |
| Msa0656850 | AT3G59570.2 | 27.473 | 182 | 107 | 7 | 223 | 400 | 369 | 529 | 1.65e-14 | 76.3 |
Find 117 sgRNAs with CRISPR-Local
Find 452 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTGACAGCCTTCATATT+TGG | 0.129257 | 4_3:+66181167 | Msa0656850:CDS |
| GGAGGTTGGGGAGGTGAAAT+TGG | 0.209496 | 4_3:-66176322 | None:intergenic |
| TTTCGTGTACAGTCAGTCTA+AGG | 0.270139 | 4_3:+66181852 | Msa0656850:CDS |
| CCAAGGGATGAATGAGTTAT+TGG | 0.275612 | 4_3:+66178339 | Msa0656850:CDS |
| TGACTGTACACGAAACTTAT+TGG | 0.277194 | 4_3:-66181844 | None:intergenic |
| ATCCCCAATTCTATGCATTT+AGG | 0.289787 | 4_3:+66181110 | Msa0656850:CDS |
| TGCTGACAGCCTTCATATTT+GGG | 0.302632 | 4_3:+66181168 | Msa0656850:CDS |
| TCCACCTAAATGCATAGAAT+TGG | 0.362457 | 4_3:-66181114 | None:intergenic |
| CCACCTAAATGCATAGAATT+GGG | 0.363506 | 4_3:-66181113 | None:intergenic |
| CAAGGTGTGCCTGATTCTGC+TGG | 0.370235 | 4_3:+66176620 | Msa0656850:CDS |
| GTGGTGGTGGTAGCCGCGGC+GGG | 0.372911 | 4_3:-66176262 | None:intergenic |
| GATGGGAGGAGACGGAGGTT+GGG | 0.375456 | 4_3:-66176335 | None:intergenic |
| ATGAGCATCCTTTGAGTCTT+GGG | 0.382293 | 4_3:+66177479 | Msa0656850:CDS |
| GATTGTACCTGTGGACCCTC+TGG | 0.387698 | 4_3:-66181208 | None:intergenic |
| GAACGTATCCCAGCAGAATC+AGG | 0.398899 | 4_3:-66176629 | None:intergenic |
| GGTGGTGGTAGCCGCGGCGG+GGG | 0.399551 | 4_3:-66176260 | None:intergenic |
| ATGGGAGGAGACGGAGGTTG+GGG | 0.399846 | 4_3:-66176334 | None:intergenic |
| CCTTGGACATACTTTACTCC+TGG | 0.415852 | 4_3:-66178322 | None:intergenic |
| AATTGAATTCCTGAGTCAAT+AGG | 0.428026 | 4_3:-66181144 | None:intergenic |
| CGATGGGAGGAGACGGAGGT+TGG | 0.428180 | 4_3:-66176336 | None:intergenic |
| GAGAGAGCTGTTAAGCCAAT+CGG | 0.429636 | 4_3:-66176212 | None:intergenic |
| GATGAGCATCCTTTGAGTCT+TGG | 0.430115 | 4_3:+66177478 | Msa0656850:CDS |
| GGAGGAGACGGAGGTTGGGG+AGG | 0.432198 | 4_3:-66176331 | None:intergenic |
| GGTGGTGGTGGTAGCCGCGG+CGG | 0.442943 | 4_3:-66176263 | None:intergenic |
| GAGCAAGGCCCTGTCACGTT+TGG | 0.443402 | 4_3:-66177434 | None:intergenic |
| CAACTAGACAATAGTGTTGT+GGG | 0.444669 | 4_3:+66180462 | Msa0656850:CDS |
| GGATTCTTCGGTGGTGGTGG+TGG | 0.445126 | 4_3:-66176284 | None:intergenic |
| TTAGAGTCATTTACAAACAT+TGG | 0.446330 | 4_3:-66181926 | None:intergenic |
| TGTAAATGACTCTAAATTTG+AGG | 0.447123 | 4_3:+66181934 | Msa0656850:three_prime_UTR |
| TTCTTCGGTGGTGGTGGTGG+TGG | 0.447749 | 4_3:-66176281 | None:intergenic |
| ATGATGCCGCCAAACGTGAC+AGG | 0.452162 | 4_3:+66177425 | Msa0656850:CDS |
| GAGGTTGGGGAGGTGAAATT+GGG | 0.454258 | 4_3:-66176321 | None:intergenic |
| TGGTGGTGGTAGCCGCGGCG+GGG | 0.455632 | 4_3:-66176261 | None:intergenic |
| CCAATAACTCATTCATCCCT+TGG | 0.457394 | 4_3:-66178339 | None:intergenic |
| TTCTGCAGGAGACTCTTCTC+CGG | 0.461362 | 4_3:+66181703 | Msa0656850:intron |
| GGTGAAATTGGGCTGTGGAC+GGG | 0.462866 | 4_3:-66176310 | None:intergenic |
| ATTCGCAAGCGCCTCCTAGC+GGG | 0.468068 | 4_3:+66181750 | Msa0656850:CDS |
| GAGCAAATGGCTAATGTTTG+TGG | 0.469058 | 4_3:-66181814 | None:intergenic |
| AGGATGTACAACTCCACTAT+TGG | 0.471200 | 4_3:+66177394 | Msa0656850:CDS |
| TATTGGCAACATAGAGCAAA+TGG | 0.475487 | 4_3:-66181827 | None:intergenic |
| CAAGGCCCTGTCACGTTTGG+CGG | 0.478192 | 4_3:-66177431 | None:intergenic |
| ATCATCAGCATCACCAATAG+TGG | 0.481244 | 4_3:-66177407 | None:intergenic |
| GAGATACAAAAGCAAAATGC+GGG | 0.485520 | 4_3:-66181885 | None:intergenic |
| AGAGGATTCTTCGGTGGTGG+TGG | 0.488706 | 4_3:-66176287 | None:intergenic |
| TGATGGATATGCGGGAATTG+AGG | 0.491397 | 4_3:+66176585 | Msa0656850:CDS |
| TTTGGTTCAGTTGTCGAAGA+AGG | 0.493660 | 4_3:+66176562 | Msa0656850:intron |
| TTCCACCGGATCGAGCGCTT+TGG | 0.498866 | 4_3:+66176909 | Msa0656850:CDS |
| AGGTGAAATTGGGCTGTGGA+CGG | 0.501179 | 4_3:-66176311 | None:intergenic |
| ATTGGCTTAACAGCTCTCTC+TGG | 0.514874 | 4_3:+66176215 | Msa0656850:CDS |
| TCTGCAGGAGACTCTTCTCC+GGG | 0.520583 | 4_3:+66181704 | Msa0656850:intron |
| AGAGAGCTGTTAAGCCAATC+GGG | 0.522903 | 4_3:-66176211 | None:intergenic |
| GGGAGAGGATTCTTCGGTGG+TGG | 0.524785 | 4_3:-66176290 | None:intergenic |
| AAGGAGGCACATCGTGGTCA+TGG | 0.525068 | 4_3:-66176414 | None:intergenic |
| TGTATGGAATCAGTTCTTCC+AGG | 0.526492 | 4_3:+66177510 | Msa0656850:CDS |
| AATTGGGCTGTGGACGGGAG+AGG | 0.526572 | 4_3:-66176305 | None:intergenic |
| AAAGAGTGTCCCAAATATGA+AGG | 0.535343 | 4_3:-66181177 | None:intergenic |
| GATGAGTGCGCTTTACATCT+CGG | 0.537521 | 4_3:-66178107 | None:intergenic |
| GTGGACGGGAGAGGATTCTT+CGG | 0.540862 | 4_3:-66176296 | None:intergenic |
| CCCAATTCTATGCATTTAGG+TGG | 0.542027 | 4_3:+66181113 | Msa0656850:CDS |
| GATGACCAAAGCGCTCGATC+CGG | 0.543453 | 4_3:-66176914 | None:intergenic |
| TCAATTATCTGCTTAGGCGG+AGG | 0.544656 | 4_3:-66176370 | None:intergenic |
| CCAGGAGTAAAGTATGTCCA+AGG | 0.545746 | 4_3:+66178322 | Msa0656850:CDS |
| GTCTTGGGAAGACCAGTGTA+TGG | 0.548559 | 4_3:+66177494 | Msa0656850:CDS |
| AATGGCTAATGTTTGTGGAC+GGG | 0.557969 | 4_3:-66181809 | None:intergenic |
| ATTGTACCTGTGGACCCTCT+GGG | 0.559228 | 4_3:-66181207 | None:intergenic |
| AGGTGACCCAGAGGGTCCAC+AGG | 0.559474 | 4_3:+66181201 | Msa0656850:CDS |
| GAAGAAGGTGATGGATATGC+GGG | 0.560352 | 4_3:+66176577 | Msa0656850:CDS |
| GAATCTTCAATTATCTGCTT+AGG | 0.560421 | 4_3:-66176376 | None:intergenic |
| GACCAAAGCGCTCGATCCGG+TGG | 0.561984 | 4_3:-66176911 | None:intergenic |
| CGGAGGATCTTGAACTACGA+TGG | 0.565129 | 4_3:-66176353 | None:intergenic |
| ACAACTAGACAATAGTGTTG+TGG | 0.571818 | 4_3:+66180461 | Msa0656850:CDS |
| TGAAGAAGAAAGTTCCCGAT+TGG | 0.572438 | 4_3:+66176197 | Msa0656850:CDS |
| CTGGGATACGTTCTACATTG+TGG | 0.573104 | 4_3:+66176639 | Msa0656850:CDS |
| TAAATTTGCAAAATCTAACC+AGG | 0.575295 | 4_3:+66178158 | Msa0656850:CDS |
| TTTGCTTGGATATCTTCCAC+CGG | 0.578588 | 4_3:+66176895 | Msa0656850:CDS |
| TCAGTTGTCGAAGAAGGTGA+TGG | 0.579146 | 4_3:+66176568 | Msa0656850:intron |
| CTGGTCTTCCCAAGACTCAA+AGG | 0.582046 | 4_3:-66177487 | None:intergenic |
| AAATGGCTAATGTTTGTGGA+CGG | 0.587156 | 4_3:-66181810 | None:intergenic |
| AAGGTGTGCCTGATTCTGCT+GGG | 0.588507 | 4_3:+66176621 | Msa0656850:CDS |
| GGGGAGGTGAAATTGGGCTG+TGG | 0.597013 | 4_3:-66176315 | None:intergenic |
| TGATGCCGCCAAACGTGACA+GGG | 0.597721 | 4_3:+66177426 | Msa0656850:CDS |
| CACCTAAATGCATAGAATTG+GGG | 0.597939 | 4_3:-66181112 | None:intergenic |
| TTCGTGTACAGTCAGTCTAA+GGG | 0.598813 | 4_3:+66181853 | Msa0656850:CDS |
| TGAACTACGATGGGAGGAGA+CGG | 0.599786 | 4_3:-66176343 | None:intergenic |
| ATCGTGGTCATGGTGATCGT+CGG | 0.601526 | 4_3:-66176404 | None:intergenic |
| GATCACTCTCCTATTGACTC+AGG | 0.601704 | 4_3:+66181135 | Msa0656850:CDS |
| AATTTCTGATCTAGAGAGCA+AGG | 0.603350 | 4_3:-66177449 | None:intergenic |
| CGAAGAAGGTGATGGATATG+CGG | 0.604704 | 4_3:+66176576 | Msa0656850:CDS |
| GAAAACATGATGAAGAGTTG+TGG | 0.605842 | 4_3:+66180523 | Msa0656850:CDS |
| TTGAAGTGAAATCACCCGCT+AGG | 0.608053 | 4_3:-66181764 | None:intergenic |
| GGAGGATCTTGAACTACGAT+GGG | 0.609089 | 4_3:-66176352 | None:intergenic |
| GAACGCATCAGCTTCAGCAA+AGG | 0.610521 | 4_3:-66180391 | None:intergenic |
| ATGGTGAGAGACGTCGTAAG+CGG | 0.612342 | 4_3:-66176437 | None:intergenic |
| CTCAAAGGATGCTCATCATG+AGG | 0.616214 | 4_3:-66177472 | None:intergenic |
| CATTCGCAAGCGCCTCCTAG+CGG | 0.617934 | 4_3:+66181749 | Msa0656850:CDS |
| CTAGCTAGTCAGAAATCACA+AGG | 0.621456 | 4_3:+66177371 | Msa0656850:intron |
| TTAGCATTGCACAACACACC+CGG | 0.621818 | 4_3:-66181722 | None:intergenic |
| CATCTGAATTAGCTAAGAAG+AGG | 0.622349 | 4_3:+66176933 | Msa0656850:CDS |
| TCTTCAATTATCTGCTTAGG+CGG | 0.629345 | 4_3:-66176373 | None:intergenic |
| TGAGAGACGTCGTAAGCGGA+AGG | 0.629928 | 4_3:-66176433 | None:intergenic |
| CCTCAGTCAATAATTGAGCA+TGG | 0.630182 | 4_3:-66176456 | None:intergenic |
| AGAGATACAAAAGCAAAATG+CGG | 0.636518 | 4_3:-66181886 | None:intergenic |
| AAGTGAAATCACCCGCTAGG+AGG | 0.642330 | 4_3:-66181761 | None:intergenic |
| TTGAGGAGGATCTCATGTCA+AGG | 0.643029 | 4_3:+66176602 | Msa0656850:CDS |
| TGGATATGCGGGAATTGAGG+AGG | 0.644082 | 4_3:+66176588 | Msa0656850:CDS |
| CAGGAGTAAAGTATGTCCAA+GGG | 0.651387 | 4_3:+66178323 | Msa0656850:CDS |
| GGATCTTGAACTACGATGGG+AGG | 0.652054 | 4_3:-66176349 | None:intergenic |
| GATACGTTCTACATTGTGGA+AGG | 0.654463 | 4_3:+66176643 | Msa0656850:CDS |
| GACGGGAGAGGATTCTTCGG+TGG | 0.655523 | 4_3:-66176293 | None:intergenic |
| ACAGTACAAACAGTTCAAAG+AGG | 0.670694 | 4_3:+66176958 | Msa0656850:CDS |
| CCATGCTCAATTATTGACTG+AGG | 0.677781 | 4_3:+66176456 | Msa0656850:CDS |
| GAGACGTCGTAAGCGGAAGG+AGG | 0.685988 | 4_3:-66176430 | None:intergenic |
| AGATACAAAAGCAAAATGCG+GGG | 0.688638 | 4_3:-66181884 | None:intergenic |
| ACTACGATGGGAGGAGACGG+AGG | 0.699325 | 4_3:-66176340 | None:intergenic |
| GAAGAACTGATTCCATACAC+TGG | 0.704179 | 4_3:-66177506 | None:intergenic |
| AAGCGGAAGGAGGCACATCG+TGG | 0.724513 | 4_3:-66176420 | None:intergenic |
| GCTAGTCAGAAATCACAAGG+AGG | 0.771386 | 4_3:+66177374 | Msa0656850:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTATTGTTAGTAATA+AGG | + | chr4_3:66180284-66180303 | Msa0656850:intron | 10.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr4_3:66177840-66177859 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr4_3:66177839-66177858 | Msa0656850:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr4_3:66177863-66177882 | Msa0656850:intron | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | + | chr4_3:66177966-66177985 | Msa0656850:intron | 15.0% |
| !!! | TTTATATTACATATTTTCCT+AGG | + | chr4_3:66178621-66178640 | Msa0656850:intron | 15.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | - | chr4_3:66179337-66179356 | None:intergenic | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | + | chr4_3:66179336-66179355 | Msa0656850:intron | 15.0% |
| !!! | TTTATGTTCTCTTTTATTAT+TGG | + | chr4_3:66180330-66180349 | Msa0656850:intron | 15.0% |
| !! | TATATTAAAAACACTTACTT+TGG | - | chr4_3:66180568-66180587 | None:intergenic | 15.0% |
| !! | TATATTAAAAACTCTTACTT+TGG | - | chr4_3:66180624-66180643 | None:intergenic | 15.0% |
| !!! | ATTTGTTAAATAAACTAACA+TGG | + | chr4_3:66180825-66180844 | Msa0656850:intron | 15.0% |
| !! | CAATTATTTACAAAGTAAAT+CGG | - | chr4_3:66181239-66181258 | None:intergenic | 15.0% |
| !! | TTACTTTGTAAATAATTGAT+TGG | + | chr4_3:66181241-66181260 | Msa0656850:intron | 15.0% |
| !! | TTCTTAAAAGAACTTAAATT+GGG | + | chr4_3:66181666-66181685 | Msa0656850:intron | 15.0% |
| !! | TTCAACGTATTTGTTTATTA+TGG | + | chr4_3:66176500-66176519 | Msa0656850:intron | 20.0% |
| !!! | CTATATGTTCTTTTTTGTTA+TGG | + | chr4_3:66176809-66176828 | Msa0656850:intron | 20.0% |
| !!! | TTCTATTTGCTTTATCTTTT+TGG | + | chr4_3:66177330-66177349 | Msa0656850:intron | 20.0% |
| !! | TTAAAAAGTCTAGAGATTAA+TGG | - | chr4_3:66177684-66177703 | None:intergenic | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | + | chr4_3:66177806-66177825 | Msa0656850:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr4_3:66177849-66177868 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr4_3:66177926-66177945 | Msa0656850:intron | 20.0% |
| !! | TTAACAAGACATTACAAAAA+GGG | - | chr4_3:66178511-66178530 | None:intergenic | 20.0% |
| !! | GTTACACAAATTATTGTTAA+AGG | - | chr4_3:66178649-66178668 | None:intergenic | 20.0% |
| !! | AAGTGTATGCATAAATTAAA+GGG | + | chr4_3:66178807-66178826 | Msa0656850:intron | 20.0% |
| !!! | ACAATTTTGTAATAGTTGAA+CGG | - | chr4_3:66180491-66180510 | None:intergenic | 20.0% |
| !!! | ATTGATGGATAAACATAAAA+AGG | - | chr4_3:66180951-66180970 | None:intergenic | 20.0% |
| !! | AAATACATGGTTGAATAATT+TGG | - | chr4_3:66181027-66181046 | None:intergenic | 20.0% |
| !! | ATGGAAATAATAAGTTAGAT+TGG | + | chr4_3:66181299-66181318 | Msa0656850:intron | 20.0% |
| !! | GTTCTTAAAAGAACTTAAAT+TGG | + | chr4_3:66181665-66181684 | Msa0656850:intron | 20.0% |
| !! | ATCGATGAATTTTACGTTTA+GGG | - | chr4_3:66176162-66176181 | None:intergenic | 25.0% |
| !! | AATCGATGAATTTTACGTTT+AGG | - | chr4_3:66176163-66176182 | None:intergenic | 25.0% |
| !! | TTCTTCTTCATCATTTTGAA+CGG | - | chr4_3:66176187-66176206 | None:intergenic | 25.0% |
| !!! | TGTTTGTGAGTTTTGATTTT+TGG | + | chr4_3:66176523-66176542 | Msa0656850:intron | 25.0% |
| ! | AATGTTATCATCTCAGATTA+TGG | + | chr4_3:66177029-66177048 | Msa0656850:intron | 25.0% |
| ! | ATGTTATCATCTCAGATTAT+GGG | + | chr4_3:66177030-66177049 | Msa0656850:intron | 25.0% |
| !!! | TACTGTTTTTTCTGTTACAT+TGG | + | chr4_3:66177247-66177266 | Msa0656850:intron | 25.0% |
| ! | TAAATTTGCAAAATCTAACC+AGG | + | chr4_3:66178158-66178177 | Msa0656850:CDS | 25.0% |
| ! | ACAAAAATAAAGGAATAACC+TGG | - | chr4_3:66178179-66178198 | None:intergenic | 25.0% |
| !!! | AGGTTATTCCTTTATTTTTG+TGG | + | chr4_3:66178178-66178197 | Msa0656850:intron | 25.0% |
| !!! | TCCTTTATTTTTGTGGAAAT+TGG | + | chr4_3:66178185-66178204 | Msa0656850:intron | 25.0% |
| ! | ACCAATTTCCACAAAAATAA+AGG | - | chr4_3:66178189-66178208 | None:intergenic | 25.0% |
| !!! | TTATTTTTGCTGACATTTTC+AGG | + | chr4_3:66178258-66178277 | Msa0656850:intron | 25.0% |
| !! | TTTTTGAACACATAGAATAG+AGG | - | chr4_3:66178367-66178386 | None:intergenic | 25.0% |
| ! | TGTAATATTCTTCTCAATGA+TGG | - | chr4_3:66178465-66178484 | None:intergenic | 25.0% |
| ! | TAACAAGACATTACAAAAAG+GGG | - | chr4_3:66178510-66178529 | None:intergenic | 25.0% |
| ! | GTTAACAAGACATTACAAAA+AGG | - | chr4_3:66178512-66178531 | None:intergenic | 25.0% |
| ! | AATTATTGTTAAAGGTTCCT+AGG | - | chr4_3:66178641-66178660 | None:intergenic | 25.0% |
| !! | CTTTAATTTATGCATACACT+TGG | - | chr4_3:66178808-66178827 | None:intergenic | 25.0% |
| ! | CAAGTGTATGCATAAATTAA+AGG | + | chr4_3:66178806-66178825 | Msa0656850:intron | 25.0% |
| ! | AGTGTATGCATAAATTAAAG+GGG | + | chr4_3:66178808-66178827 | Msa0656850:intron | 25.0% |
| ! | GAGATGACAAATCAAAATTT+AGG | + | chr4_3:66178848-66178867 | Msa0656850:intron | 25.0% |
| ! | ATTCCAATCTATAAGAACAA+AGG | + | chr4_3:66178896-66178915 | Msa0656850:intron | 25.0% |
| ! | TTCCAATCTATAAGAACAAA+GGG | + | chr4_3:66178897-66178916 | Msa0656850:intron | 25.0% |
| !!! | ACACTTAGTTTTCATTGATT+TGG | + | chr4_3:66179123-66179142 | Msa0656850:intron | 25.0% |
| ! | TATTGTTATGGGAAAATCTA+CGG | - | chr4_3:66179287-66179306 | None:intergenic | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | - | chr4_3:66179329-66179348 | None:intergenic | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | - | chr4_3:66179330-66179349 | None:intergenic | 25.0% |
| ! | ATATTTAAACCGTGTAACTT+GGG | - | chr4_3:66179599-66179618 | None:intergenic | 25.0% |
| ! | TTACACGGTTTAAATATCTT+GGG | + | chr4_3:66179602-66179621 | Msa0656850:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr4_3:66179924-66179943 | Msa0656850:intron | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr4_3:66180066-66180085 | Msa0656850:intron | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | - | chr4_3:66180106-66180125 | None:intergenic | 25.0% |
| !! | TTGTTGTTGTATCAGTATAA+AGG | + | chr4_3:66180190-66180209 | Msa0656850:intron | 25.0% |
| !!! | TTTCGCTTTTAGTTTACATT+TGG | + | chr4_3:66180653-66180672 | Msa0656850:intron | 25.0% |
| ! | ACATGGAATATACAAAAATG+CGG | + | chr4_3:66180842-66180861 | Msa0656850:intron | 25.0% |
| ! | CAAAATAACAATTCTAACAC+AGG | - | chr4_3:66180904-66180923 | None:intergenic | 25.0% |
| ! | ATTAAACAGTGTTTCAGTAA+TGG | + | chr4_3:66181057-66181076 | Msa0656850:intron | 25.0% |
| ! | AAACAATAGTCACTAAAAAC+TGG | - | chr4_3:66181542-66181561 | None:intergenic | 25.0% |
| ! | TCTTAAACTGTATATAGAAC+TGG | + | chr4_3:66181584-66181603 | Msa0656850:intron | 25.0% |
| ! | TTAGAGTCATTTACAAACAT+TGG | - | chr4_3:66181929-66181948 | None:intergenic | 25.0% |
| ! | TGTAAATGACTCTAAATTTG+AGG | + | chr4_3:66181934-66181953 | Msa0656850:three_prime_UTR | 25.0% |
| !! | AATTTTACGTTTAGGGTTTC+TGG | - | chr4_3:66176155-66176174 | None:intergenic | 30.0% |
| GAATCTTCAATTATCTGCTT+AGG | - | chr4_3:66176379-66176398 | None:intergenic | 30.0% | |
| !!! | GTGAGTTTTGATTTTTGGAA+TGG | + | chr4_3:66176528-66176547 | Msa0656850:intron | 30.0% |
| !!! | GGAATGGTTTGTTTTTGTTT+TGG | + | chr4_3:66176544-66176563 | Msa0656850:intron | 30.0% |
| !!! | TATTGATGTCTTGTTTTTCG+CGG | + | chr4_3:66176718-66176737 | Msa0656850:intron | 30.0% |
| ! | TGTATTGATGATTCCCAAAT+AGG | + | chr4_3:66176768-66176787 | Msa0656850:intron | 30.0% |
| ! | GTATTGATGATTCCCAAATA+GGG | + | chr4_3:66176769-66176788 | Msa0656850:intron | 30.0% |
| ! | TATTGATGATTCCCAAATAG+GGG | + | chr4_3:66176770-66176789 | Msa0656850:intron | 30.0% |
| ACTAACTAAATCCCCTATTT+GGG | - | chr4_3:66176784-66176803 | None:intergenic | 30.0% | |
| TACTAACTAAATCCCCTATT+TGG | - | chr4_3:66176785-66176804 | None:intergenic | 30.0% | |
| TGTTATCATCTCAGATTATG+GGG | + | chr4_3:66177031-66177050 | Msa0656850:intron | 30.0% | |
| ATTCTTTAATCGTGAGTTGT+TGG | + | chr4_3:66177073-66177092 | Msa0656850:intron | 30.0% | |
| ATGTAAGAACCAATAGAGAT+TGG | - | chr4_3:66177151-66177170 | None:intergenic | 30.0% | |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr4_3:66177757-66177776 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr4_3:66177758-66177777 | Msa0656850:intron | 30.0% |
| TATAATGCTTTGGTATGCAA+AGG | + | chr4_3:66178021-66178040 | Msa0656850:intron | 30.0% | |
| AAAAACCAATAAGTTCATGC+TGG | - | chr4_3:66178239-66178258 | None:intergenic | 30.0% | |
| ! | ATTTTTGCGAAGTTAAATCC+AGG | + | chr4_3:66178304-66178323 | Msa0656850:CDS | 30.0% |
| ! | AAAGCATGGATTACAAAAAG+AGG | - | chr4_3:66178534-66178553 | None:intergenic | 30.0% |
| TTAAATGTAAAGGAGACTAC+AGG | - | chr4_3:66178567-66178586 | None:intergenic | 30.0% | |
| AAGAATTACAGGTATGCATA+TGG | - | chr4_3:66178725-66178744 | None:intergenic | 30.0% | |
| TGGAAAAGGTAAAGAATTAC+AGG | - | chr4_3:66178736-66178755 | None:intergenic | 30.0% | |
| AAAACATGAAATTCTATGCG+TGG | - | chr4_3:66178756-66178775 | None:intergenic | 30.0% | |
| AAATATAAACCAGTGGAATG+AGG | - | chr4_3:66178785-66178804 | None:intergenic | 30.0% | |
| TCCAATCTATAAGAACAAAG+GGG | + | chr4_3:66178898-66178917 | Msa0656850:intron | 30.0% | |
| !!! | AGTTTTCATTGATTTGGAGA+AGG | + | chr4_3:66179129-66179148 | Msa0656850:intron | 30.0% |
| ! | GTAGATTTTCCCATAACAAT+AGG | + | chr4_3:66179286-66179305 | Msa0656850:intron | 30.0% |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | + | chr4_3:66179348-66179367 | Msa0656850:intron | 30.0% |
| TATTTAAACCGTGTAACTTG+GGG | - | chr4_3:66179598-66179617 | None:intergenic | 30.0% | |
| GATATTTAAACCGTGTAACT+TGG | - | chr4_3:66179600-66179619 | None:intergenic | 30.0% | |
| GTTACACGGTTTAAATATCT+TGG | + | chr4_3:66179601-66179620 | Msa0656850:intron | 30.0% | |
| TATTCAAACTGTGGTTGAAA+TGG | + | chr4_3:66179672-66179691 | Msa0656850:intron | 30.0% | |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr4_3:66179920-66179939 | None:intergenic | 30.0% |
| TTGATCTACTCTTCTTACAA+CGG | - | chr4_3:66179990-66180009 | None:intergenic | 30.0% | |
| TGTAAGAAGAGTAGATCAAA+TGG | + | chr4_3:66179991-66180010 | Msa0656850:intron | 30.0% | |
| !!! | GTTTCTCGAATGGTTTTTTT+AGG | - | chr4_3:66180049-66180068 | None:intergenic | 30.0% |
| ! | TTTTCTAATGGTTTCTCGAA+TGG | - | chr4_3:66180059-66180078 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr4_3:66180071-66180090 | None:intergenic | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | + | chr4_3:66180110-66180129 | Msa0656850:intron | 30.0% |
| TAAGGAGTCATGTATGATTA+TGG | + | chr4_3:66180302-66180321 | Msa0656850:intron | 30.0% | |
| CATTTGGACATATATTGAGT+AGG | + | chr4_3:66180669-66180688 | Msa0656850:intron | 30.0% | |
| !!! | ATTTTTTTGTTCGCACATTG+TGG | + | chr4_3:66180748-66180767 | Msa0656850:intron | 30.0% |
| TACTGTTATGCAATTGATTG+TGG | + | chr4_3:66180775-66180794 | Msa0656850:intron | 30.0% | |
| CATGGAATATACAAAAATGC+GGG | + | chr4_3:66180843-66180862 | Msa0656850:intron | 30.0% | |
| TTATCCATCAATTAAGCAAC+AGG | + | chr4_3:66180959-66180978 | Msa0656850:intron | 30.0% | |
| TATCCATCAATTAAGCAACA+GGG | + | chr4_3:66180960-66180979 | Msa0656850:intron | 30.0% | |
| !! | TTCAACCATGTATTTGCTAT+TGG | + | chr4_3:66181032-66181051 | Msa0656850:intron | 30.0% |
| AATAGCCAATAGCAAATACA+TGG | - | chr4_3:66181040-66181059 | None:intergenic | 30.0% | |
| AATTGAATTCCTGAGTCAAT+AGG | - | chr4_3:66181147-66181166 | None:intergenic | 30.0% | |
| ! | TTCCATCTTTTCTTCACAAT+CGG | - | chr4_3:66181431-66181450 | None:intergenic | 30.0% |
| TGAAGAAAAGATGGAAGATA+TGG | + | chr4_3:66181435-66181454 | Msa0656850:intron | 30.0% | |
| TGCACAAAAGAAAATAAGGA+GGG | - | chr4_3:66181497-66181516 | None:intergenic | 30.0% | |
| ATGCACAAAAGAAAATAAGG+AGG | - | chr4_3:66181498-66181517 | None:intergenic | 30.0% | |
| CACATGCACAAAAGAAAATA+AGG | - | chr4_3:66181501-66181520 | None:intergenic | 30.0% | |
| TATACAGTTTAAGAAGCAAC+AGG | - | chr4_3:66181578-66181597 | None:intergenic | 30.0% | |
| AGAGATACAAAAGCAAAATG+CGG | - | chr4_3:66181889-66181908 | None:intergenic | 30.0% | |
| TCTTCAATTATCTGCTTAGG+CGG | - | chr4_3:66176376-66176395 | None:intergenic | 35.0% | |
| CGTTGAATCAGTTGTTAAAG+TGG | - | chr4_3:66176487-66176506 | None:intergenic | 35.0% | |
| AAAGAATGGAAATGCAGTGA+TGG | + | chr4_3:66176742-66176761 | Msa0656850:intron | 35.0% | |
| CATCTGAATTAGCTAAGAAG+AGG | + | chr4_3:66176933-66176952 | Msa0656850:CDS | 35.0% | |
| ACAGTACAAACAGTTCAAAG+AGG | + | chr4_3:66176958-66176977 | Msa0656850:CDS | 35.0% | |
| TTTAATCGTGAGTTGTTGGT+AGG | + | chr4_3:66177077-66177096 | Msa0656850:intron | 35.0% | |
| ACATCATCTCCAATCTCTAT+TGG | + | chr4_3:66177139-66177158 | Msa0656850:intron | 35.0% | |
| TGGTTCTTACATCAAACTAC+TGG | + | chr4_3:66177159-66177178 | Msa0656850:intron | 35.0% | |
| ! | TTACATCAAACTACTGGCTA+GGG | + | chr4_3:66177165-66177184 | Msa0656850:intron | 35.0% |
| AAGTCAACAAAGATTGCACT+TGG | - | chr4_3:66177289-66177308 | None:intergenic | 35.0% | |
| ! | AAGTGCAATCTTTGTTGACT+TGG | + | chr4_3:66177288-66177307 | Msa0656850:intron | 35.0% |
| AATTTCTGATCTAGAGAGCA+AGG | - | chr4_3:66177452-66177471 | None:intergenic | 35.0% | |
| AGATTCATTTGCATAGTACC+TGG | - | chr4_3:66177531-66177550 | None:intergenic | 35.0% | |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr4_3:66177888-66177907 | Msa0656850:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr4_3:66177892-66177911 | Msa0656850:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr4_3:66177992-66178011 | Msa0656850:intron | 35.0% |
| TCATTGCATTCTGTAGGATA+CGG | + | chr4_3:66178065-66178084 | Msa0656850:intron | 35.0% | |
| CCAGAGAAAAAATGCATATC+AGG | - | chr4_3:66178132-66178151 | None:intergenic | 35.0% | |
| !!! | CCTGATATGCATTTTTTCTC+TGG | + | chr4_3:66178129-66178148 | Msa0656850:CDS | 35.0% |
| ! | CTTTTCCAGCATGAACTTAT+TGG | + | chr4_3:66178231-66178250 | Msa0656850:intron | 35.0% |
| !! | TTTTTGCTGACATTTTCAGG+AGG | + | chr4_3:66178261-66178280 | Msa0656850:intron | 35.0% |
| AAGGGGTTAACAAAACATCA+GGG | - | chr4_3:66178493-66178512 | None:intergenic | 35.0% | |
| AAAGGGGTTAACAAAACATC+AGG | - | chr4_3:66178494-66178513 | None:intergenic | 35.0% | |
| TATGGTGCTTCTGATTATCA+CGG | - | chr4_3:66178707-66178726 | None:intergenic | 35.0% | |
| TGAAATTCTATGCGTGGAAA+AGG | - | chr4_3:66178750-66178769 | None:intergenic | 35.0% | |
| CACTTGGAAATATAAACCAG+TGG | - | chr4_3:66178792-66178811 | None:intergenic | 35.0% | |
| AATTAAAGGGGAAGCCATAA+TGG | + | chr4_3:66178820-66178839 | Msa0656850:intron | 35.0% | |
| ATTAAAGGGGAAGCCATAAT+GGG | + | chr4_3:66178821-66178840 | Msa0656850:intron | 35.0% | |
| TCCCCTTTGTTCTTATAGAT+TGG | - | chr4_3:66178902-66178921 | None:intergenic | 35.0% | |
| TACAACATTGCGCGAATTAT+AGG | + | chr4_3:66178924-66178943 | Msa0656850:intron | 35.0% | |
| ACAACATTGCGCGAATTATA+GGG | + | chr4_3:66178925-66178944 | Msa0656850:intron | 35.0% | |
| TGAGTCATACCATGAAGTTA+TGG | + | chr4_3:66178960-66178979 | Msa0656850:intron | 35.0% | |
| GAGTCATACCATGAAGTTAT+GGG | + | chr4_3:66178961-66178980 | Msa0656850:intron | 35.0% | |
| ATACCATGAAGTTATGGGAA+AGG | + | chr4_3:66178966-66178985 | Msa0656850:intron | 35.0% | |
| TACCATGAAGTTATGGGAAA+GGG | + | chr4_3:66178967-66178986 | Msa0656850:intron | 35.0% | |
| TTACGTACGGATAACCAATT+TGG | + | chr4_3:66179023-66179042 | Msa0656850:intron | 35.0% | |
| !! | ATCCTGGATAGCTCTAATAT+AGG | - | chr4_3:66179218-66179237 | None:intergenic | 35.0% |
| ATATTAGAGCTATCCAGGAT+AGG | + | chr4_3:66179218-66179237 | Msa0656850:intron | 35.0% | |
| TACATCTTTGTGCTAACTCT+TGG | - | chr4_3:66179381-66179400 | None:intergenic | 35.0% | |
| TGGAATGTAACTTCAGCAAA+AGG | + | chr4_3:66179527-66179546 | Msa0656850:intron | 35.0% | |
| ATTTAAACCGTGTAACTTGG+GGG | - | chr4_3:66179597-66179616 | None:intergenic | 35.0% | |
| !! | TTCTCCGTCATTTTGTACTA+TGG | - | chr4_3:66179629-66179648 | None:intergenic | 35.0% |
| ACATCATCGTATTCAAACTG+TGG | + | chr4_3:66179663-66179682 | Msa0656850:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | + | chr4_3:66179725-66179744 | Msa0656850:intron | 35.0% |
| AACTTTCCTTTCAGCTTAAG+TGG | - | chr4_3:66179734-66179753 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr4_3:66179913-66179932 | Msa0656850:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | chr4_3:66179933-66179952 | Msa0656850:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr4_3:66179938-66179957 | Msa0656850:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr4_3:66179994-66180013 | Msa0656850:intron | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr4_3:66180078-66180097 | Msa0656850:intron | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr4_3:66180090-66180109 | Msa0656850:intron | 35.0% |
| TATAAAGGTAGCATTGCTCA+CGG | + | chr4_3:66180205-66180224 | Msa0656850:intron | 35.0% | |
| AAGGCCTGCATATTGTAATA+GGG | - | chr4_3:66180375-66180394 | None:intergenic | 35.0% | |
| AAAGGCCTGCATATTGTAAT+AGG | - | chr4_3:66180376-66180395 | None:intergenic | 35.0% | |
| !! | TGTTTTGTTGAGCTATTGAG+TGG | + | chr4_3:66180417-66180436 | Msa0656850:CDS | 35.0% |
| !! | GTTTTGTTGAGCTATTGAGT+GGG | + | chr4_3:66180418-66180437 | Msa0656850:CDS | 35.0% |
| ACAACTAGACAATAGTGTTG+TGG | + | chr4_3:66180461-66180480 | Msa0656850:CDS | 35.0% | |
| CAACTAGACAATAGTGTTGT+GGG | + | chr4_3:66180462-66180481 | Msa0656850:CDS | 35.0% | |
| GAAAACATGATGAAGAGTTG+TGG | + | chr4_3:66180523-66180542 | Msa0656850:CDS | 35.0% | |
| TATCATCAAAGCAATGAAGC+AGG | - | chr4_3:66180875-66180894 | None:intergenic | 35.0% | |
| ATCCCCAATTCTATGCATTT+AGG | + | chr4_3:66181110-66181129 | Msa0656850:CDS | 35.0% | |
| CACCTAAATGCATAGAATTG+GGG | - | chr4_3:66181115-66181134 | None:intergenic | 35.0% | |
| CCACCTAAATGCATAGAATT+GGG | - | chr4_3:66181116-66181135 | None:intergenic | 35.0% | |
| TCCACCTAAATGCATAGAAT+TGG | - | chr4_3:66181117-66181136 | None:intergenic | 35.0% | |
| !! | AAAGAGTGTCCCAAATATGA+AGG | - | chr4_3:66181180-66181199 | None:intergenic | 35.0% |
| !! | CATATTTGGGACACTCTTTT+AGG | + | chr4_3:66181181-66181200 | Msa0656850:CDS | 35.0% |
| AATGGCTCATGTTTCTTTGA+TGG | + | chr4_3:66181280-66181299 | Msa0656850:intron | 35.0% | |
| ! | TAGTGTCAATTTGCTCATAC+TGG | + | chr4_3:66181345-66181364 | Msa0656850:intron | 35.0% |
| CTACTCTTATTCCACTTTAG+AGG | + | chr4_3:66181402-66181421 | Msa0656850:intron | 35.0% | |
| ! | TCCATCTTTTCTTCACAATC+GGG | - | chr4_3:66181430-66181449 | None:intergenic | 35.0% |
| GGAAGATATGGCCATATTAT+CGG | + | chr4_3:66181447-66181466 | Msa0656850:intron | 35.0% | |
| GAAGATATGGCCATATTATC+GGG | + | chr4_3:66181448-66181467 | Msa0656850:intron | 35.0% | |
| GTTCTAATGTCCCGATAATA+TGG | - | chr4_3:66181461-66181480 | None:intergenic | 35.0% | |
| ATCGGGAAGTTAATGAGTTT+GGG | + | chr4_3:66181623-66181642 | Msa0656850:intron | 35.0% | |
| AAATGGCTAATGTTTGTGGA+CGG | - | chr4_3:66181813-66181832 | None:intergenic | 35.0% | |
| TATTGGCAACATAGAGCAAA+TGG | - | chr4_3:66181830-66181849 | None:intergenic | 35.0% | |
| TGACTGTACACGAAACTTAT+TGG | - | chr4_3:66181847-66181866 | None:intergenic | 35.0% | |
| AGATACAAAAGCAAAATGCG+GGG | - | chr4_3:66181887-66181906 | None:intergenic | 35.0% | |
| GAGATACAAAAGCAAAATGC+GGG | - | chr4_3:66181888-66181907 | None:intergenic | 35.0% | |
| TGAAGAAGAAAGTTCCCGAT+TGG | + | chr4_3:66176197-66176216 | Msa0656850:CDS | 40.0% | |
| CCTCAGTCAATAATTGAGCA+TGG | - | chr4_3:66176459-66176478 | None:intergenic | 40.0% | |
| ! | CCATGCTCAATTATTGACTG+AGG | + | chr4_3:66176456-66176475 | Msa0656850:CDS | 40.0% |
| ! | TTTGGTTCAGTTGTCGAAGA+AGG | + | chr4_3:66176562-66176581 | Msa0656850:intron | 40.0% |
| GATACGTTCTACATTGTGGA+AGG | + | chr4_3:66176643-66176662 | Msa0656850:CDS | 40.0% | |
| !! | TTGTTTTTCGCGGCAAAGAA+TGG | + | chr4_3:66176728-66176747 | Msa0656850:intron | 40.0% |
| ! | TGATGTTTGCAGCTTTTGCT+TGG | + | chr4_3:66176881-66176900 | Msa0656850:intron | 40.0% |
| TTTGCTTGGATATCTTCCAC+CGG | + | chr4_3:66176895-66176914 | Msa0656850:CDS | 40.0% | |
| ATCCTGTAAGTCAACTGCTT+AGG | + | chr4_3:66176993-66177012 | Msa0656850:intron | 40.0% | |
| ! | TTCCTAAGCAGTTGACTTAC+AGG | - | chr4_3:66176998-66177017 | None:intergenic | 40.0% |
| TATCATCTCAGATTATGGGG+TGG | + | chr4_3:66177034-66177053 | Msa0656850:intron | 40.0% | |
| ! | CTTACATCAAACTACTGGCT+AGG | + | chr4_3:66177164-66177183 | Msa0656850:intron | 40.0% |
| ! | TACATCAAACTACTGGCTAG+GGG | + | chr4_3:66177166-66177185 | Msa0656850:intron | 40.0% |
| GGGGAAGAGAGATAATTCTA+AGG | + | chr4_3:66177185-66177204 | Msa0656850:intron | 40.0% | |
| CTAGCTAGTCAGAAATCACA+AGG | + | chr4_3:66177371-66177390 | Msa0656850:intron | 40.0% | |
| AGGATGTACAACTCCACTAT+TGG | + | chr4_3:66177394-66177413 | Msa0656850:CDS | 40.0% | |
| ATCATCAGCATCACCAATAG+TGG | - | chr4_3:66177410-66177429 | None:intergenic | 40.0% | |
| ATGAGCATCCTTTGAGTCTT+GGG | + | chr4_3:66177479-66177498 | Msa0656850:CDS | 40.0% | |
| ! | GAAGAACTGATTCCATACAC+TGG | - | chr4_3:66177509-66177528 | None:intergenic | 40.0% |
| TGTATGGAATCAGTTCTTCC+AGG | + | chr4_3:66177510-66177529 | Msa0656850:CDS | 40.0% | |
| ATGAAGTCACTGATCATGCA+TGG | + | chr4_3:66177580-66177599 | Msa0656850:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr4_3:66177996-66178015 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr4_3:66177891-66177910 | Msa0656850:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr4_3:66177996-66178015 | Msa0656850:intron | 40.0% |
| GTATCCTACAGAATGCAATG+AGG | - | chr4_3:66178066-66178085 | None:intergenic | 40.0% | |
| CAGGAGTAAAGTATGTCCAA+GGG | + | chr4_3:66178323-66178342 | Msa0656850:CDS | 40.0% | |
| CCAATAACTCATTCATCCCT+TGG | - | chr4_3:66178342-66178361 | None:intergenic | 40.0% | |
| CCAAGGGATGAATGAGTTAT+TGG | + | chr4_3:66178339-66178358 | Msa0656850:CDS | 40.0% | |
| ! | TCACTGCATTTTCTTCGTCT+GGG | - | chr4_3:66178393-66178412 | None:intergenic | 40.0% |
| AATGTAAAGGAGACTACAGG+TGG | - | chr4_3:66178564-66178583 | None:intergenic | 40.0% | |
| ATGGTGCTTCTGATTATCAC+GGG | - | chr4_3:66178706-66178725 | None:intergenic | 40.0% | |
| TTTCTGTTTCCTCATTCCAC+TGG | + | chr4_3:66178773-66178792 | Msa0656850:intron | 40.0% | |
| TTAAAGGGGAAGCCATAATG+GGG | + | chr4_3:66178822-66178841 | Msa0656850:intron | 40.0% | |
| CAACATTGCGCGAATTATAG+GGG | + | chr4_3:66178926-66178945 | Msa0656850:intron | 40.0% | |
| AAAGAGACTCACGTTACGTA+CGG | + | chr4_3:66179010-66179029 | Msa0656850:intron | 40.0% | |
| !!! | AACCAATTTGGTTTTGTGCC+TGG | + | chr4_3:66179035-66179054 | Msa0656850:intron | 40.0% |
| !!! | ACCAATTTGGTTTTGTGCCT+GGG | + | chr4_3:66179036-66179055 | Msa0656850:intron | 40.0% |
| ! | GAGTACCTAGAGAGATTTTG+TGG | + | chr4_3:66179161-66179180 | Msa0656850:intron | 40.0% |
| GCTTTCCACAAAATCTCTCT+AGG | - | chr4_3:66179169-66179188 | None:intergenic | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | + | chr4_3:66179213-66179232 | Msa0656850:intron | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | - | chr4_3:66179298-66179317 | None:intergenic | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | - | chr4_3:66179299-66179318 | None:intergenic | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | + | chr4_3:66179298-66179317 | Msa0656850:intron | 40.0% | |
| TAACAATAGGACTGCACCAA+GGG | + | chr4_3:66179299-66179318 | Msa0656850:intron | 40.0% | |
| TAGAAGCAAGACGGAGTATA+TGG | + | chr4_3:66179507-66179526 | Msa0656850:intron | 40.0% | |
| AACTTCAGCAAAAGGAGAAG+TGG | + | chr4_3:66179535-66179554 | Msa0656850:intron | 40.0% | |
| ACTTCAGCAAAAGGAGAAGT+GGG | + | chr4_3:66179536-66179555 | Msa0656850:intron | 40.0% | |
| ATATCATCCCCCAAGTTACA+CGG | + | chr4_3:66179587-66179606 | Msa0656850:intron | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | + | chr4_3:66179622-66179641 | Msa0656850:intron | 40.0% | |
| CACTTACTTTACTCTCGTGT+TGG | - | chr4_3:66179806-66179825 | None:intergenic | 40.0% | |
| CGAGAGTAAAGTAAGTGTAG+CGG | + | chr4_3:66179809-66179828 | Msa0656850:intron | 40.0% | |
| AGACTAGACAGGATAGGATT+AGG | + | chr4_3:66179862-66179881 | Msa0656850:intron | 40.0% | |
| TCTTCTTACAACGGCATCTA+CGG | - | chr4_3:66179981-66180000 | None:intergenic | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr4_3:66180019-66180038 | Msa0656850:intron | 40.0% | |
| ATAAAGGTAGCATTGCTCAC+GGG | + | chr4_3:66180206-66180225 | Msa0656850:intron | 40.0% | |
| ! | CTTGCTGTGATGTATGATCA+CGG | + | chr4_3:66180245-66180264 | Msa0656850:intron | 40.0% |
| TTGCTGTGATGTATGATCAC+GGG | + | chr4_3:66180246-66180265 | Msa0656850:intron | 40.0% | |
| AGCTCCCTATTACAATATGC+AGG | + | chr4_3:66180368-66180387 | Msa0656850:intron | 40.0% | |
| CATCAATTAAGCAACAGGGA+GGG | + | chr4_3:66180964-66180983 | Msa0656850:intron | 40.0% | |
| ATCAATTAAGCAACAGGGAG+GGG | + | chr4_3:66180965-66180984 | Msa0656850:intron | 40.0% | |
| CCCAATTCTATGCATTTAGG+TGG | + | chr4_3:66181113-66181132 | Msa0656850:CDS | 40.0% | |
| TTGCTGACAGCCTTCATATT+TGG | + | chr4_3:66181167-66181186 | Msa0656850:CDS | 40.0% | |
| TGCTGACAGCCTTCATATTT+GGG | + | chr4_3:66181168-66181187 | Msa0656850:CDS | 40.0% | |
| GGCATGTAGCATTTCAGTAA+TGG | + | chr4_3:66181262-66181281 | Msa0656850:intron | 40.0% | |
| TCCCGATTGTGAAGAAAAGA+TGG | + | chr4_3:66181426-66181445 | Msa0656850:intron | 40.0% | |
| CTGTATATAGAACTGGTGAG+TGG | + | chr4_3:66181591-66181610 | Msa0656850:intron | 40.0% | |
| GATCGGGAAGTTAATGAGTT+TGG | + | chr4_3:66181622-66181641 | Msa0656850:intron | 40.0% | |
| AAACTGACACAATGTTCTGC+AGG | + | chr4_3:66181689-66181708 | Msa0656850:intron | 40.0% | |
| AATGGCTAATGTTTGTGGAC+GGG | - | chr4_3:66181812-66181831 | None:intergenic | 40.0% | |
| GAGCAAATGGCTAATGTTTG+TGG | - | chr4_3:66181817-66181836 | None:intergenic | 40.0% | |
| TTTCGTGTACAGTCAGTCTA+AGG | + | chr4_3:66181852-66181871 | Msa0656850:CDS | 40.0% | |
| TTCGTGTACAGTCAGTCTAA+GGG | + | chr4_3:66181853-66181872 | Msa0656850:CDS | 40.0% | |
| AGAGAGCTGTTAAGCCAATC+GGG | - | chr4_3:66176214-66176233 | None:intergenic | 45.0% | |
| GAGAGAGCTGTTAAGCCAAT+CGG | - | chr4_3:66176215-66176234 | None:intergenic | 45.0% | |
| ! | ATTGGCTTAACAGCTCTCTC+TGG | + | chr4_3:66176215-66176234 | Msa0656850:CDS | 45.0% |
| GGAGGATCTTGAACTACGAT+GGG | - | chr4_3:66176355-66176374 | None:intergenic | 45.0% | |
| TCAATTATCTGCTTAGGCGG+AGG | - | chr4_3:66176373-66176392 | None:intergenic | 45.0% | |
| TCAGTTGTCGAAGAAGGTGA+TGG | + | chr4_3:66176568-66176587 | Msa0656850:intron | 45.0% | |
| !! | CGAAGAAGGTGATGGATATG+CGG | + | chr4_3:66176576-66176595 | Msa0656850:CDS | 45.0% |
| !! | GAAGAAGGTGATGGATATGC+GGG | + | chr4_3:66176577-66176596 | Msa0656850:CDS | 45.0% |
| ! | TGATGGATATGCGGGAATTG+AGG | + | chr4_3:66176585-66176604 | Msa0656850:CDS | 45.0% |
| TTGAGGAGGATCTCATGTCA+AGG | + | chr4_3:66176602-66176621 | Msa0656850:CDS | 45.0% | |
| CTGGGATACGTTCTACATTG+TGG | + | chr4_3:66176639-66176658 | Msa0656850:CDS | 45.0% | |
| ATCTCAGATTATGGGGTGGA+GGG | + | chr4_3:66177038-66177057 | Msa0656850:intron | 45.0% | |
| GCTAGTCAGAAATCACAAGG+AGG | + | chr4_3:66177374-66177393 | Msa0656850:intron | 45.0% | |
| CTCAAAGGATGCTCATCATG+AGG | - | chr4_3:66177475-66177494 | None:intergenic | 45.0% | |
| GATGAGCATCCTTTGAGTCT+TGG | + | chr4_3:66177478-66177497 | Msa0656850:CDS | 45.0% | |
| AACGGAGGGAGTAGTACATT+AGG | - | chr4_3:66177739-66177758 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4_3:66177995-66178014 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr4_3:66177995-66178014 | Msa0656850:intron | 45.0% |
| ! | ACGGAGGGAGTATAATGCTT+TGG | + | chr4_3:66178011-66178030 | Msa0656850:intron | 45.0% |
| CGATCCTCATTGCATTCTGT+AGG | + | chr4_3:66178059-66178078 | Msa0656850:intron | 45.0% | |
| GATGAGTGCGCTTTACATCT+CGG | - | chr4_3:66178110-66178129 | None:intergenic | 45.0% | |
| CCTTGGACATACTTTACTCC+TGG | - | chr4_3:66178325-66178344 | None:intergenic | 45.0% | |
| CCAGGAGTAAAGTATGTCCA+AGG | + | chr4_3:66178322-66178341 | Msa0656850:CDS | 45.0% | |
| ! | CTCACTGCATTTTCTTCGTC+TGG | - | chr4_3:66178394-66178413 | None:intergenic | 45.0% |
| TAAAGGGGAAGCCATAATGG+GGG | + | chr4_3:66178823-66178842 | Msa0656850:intron | 45.0% | |
| TGTCATCTCTACCCCCATTA+TGG | - | chr4_3:66178837-66178856 | None:intergenic | 45.0% | |
| CACCCTTTCCCATAACTTCA+TGG | - | chr4_3:66178972-66178991 | None:intergenic | 45.0% | |
| TCCCAGGCACAAAACCAAAT+TGG | - | chr4_3:66179040-66179059 | None:intergenic | 45.0% | |
| !!! | AATTTGGTTTTGTGCCTGGG+AGG | + | chr4_3:66179039-66179058 | Msa0656850:intron | 45.0% |
| CTACTTACTTTGACGCGTGA+TGG | + | chr4_3:66179079-66179098 | Msa0656850:intron | 45.0% | |
| ! | AGAGATTTTGTGGAAAGCCC+TGG | + | chr4_3:66179171-66179190 | Msa0656850:intron | 45.0% |
| AGCTATCCAGGATAGGTATG+AGG | + | chr4_3:66179225-66179244 | Msa0656850:intron | 45.0% | |
| GCTATCCAGGATAGGTATGA+GGG | + | chr4_3:66179226-66179245 | Msa0656850:intron | 45.0% | |
| ! | GCAGATGATGTAGTCTTGCT+TGG | + | chr4_3:66179409-66179428 | Msa0656850:intron | 45.0% |
| AGTCGAGGGAGGAGTTAAAT+GGG | + | chr4_3:66179434-66179453 | Msa0656850:intron | 45.0% | |
| GTCTCTAACTTTCACCTCCA+AGG | - | chr4_3:66179566-66179585 | None:intergenic | 45.0% | |
| GTGTAACTTGGGGGATGATA+TGG | - | chr4_3:66179588-66179607 | None:intergenic | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | chr4_3:66179686-66179705 | Msa0656850:intron | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | - | chr4_3:66179705-66179724 | None:intergenic | 45.0% | |
| TCAGACAACAACAGTCAGAC+CGG | + | chr4_3:66179757-66179776 | Msa0656850:intron | 45.0% | |
| ! | AAGTAAGTGTAGCGGAGATG+AGG | + | chr4_3:66179817-66179836 | Msa0656850:intron | 45.0% |
| !! | AGGATGTTGTGATGGATGAG+TGG | + | chr4_3:66179837-66179856 | Msa0656850:intron | 45.0% |
| GATGAGTGGTAAGACTAGAC+AGG | + | chr4_3:66179851-66179870 | Msa0656850:intron | 45.0% | |
| GTGGTAAGACTAGACAGGAT+AGG | + | chr4_3:66179856-66179875 | Msa0656850:intron | 45.0% | |
| TGACACCATTAGAGAGAGAG+TGG | + | chr4_3:66179887-66179906 | Msa0656850:intron | 45.0% | |
| GACACCATTAGAGAGAGAGT+GGG | + | chr4_3:66179888-66179907 | Msa0656850:intron | 45.0% | |
| ACACCATTAGAGAGAGAGTG+GGG | + | chr4_3:66179889-66179908 | Msa0656850:intron | 45.0% | |
| CTTCTTACAACGGCATCTAC+GGG | - | chr4_3:66179980-66179999 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr4_3:66180003-66180022 | Msa0656850:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr4_3:66180013-66180032 | Msa0656850:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4_3:66180159-66180178 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4_3:66180160-66180179 | None:intergenic | 45.0% |
| TGTGATGTATGATCACGGGA+AGG | + | chr4_3:66180250-66180269 | Msa0656850:intron | 45.0% | |
| GTGATGTATGATCACGGGAA+GGG | + | chr4_3:66180251-66180270 | Msa0656850:intron | 45.0% | |
| ! | CCTCCCTGTTGCTTAATTGA+TGG | - | chr4_3:66180966-66180985 | None:intergenic | 45.0% |
| CCATCAATTAAGCAACAGGG+AGG | + | chr4_3:66180963-66180982 | Msa0656850:intron | 45.0% | |
| TCAATTAAGCAACAGGGAGG+GGG | + | chr4_3:66180966-66180985 | Msa0656850:intron | 45.0% | |
| !! | GATCACTCTCCTATTGACTC+AGG | + | chr4_3:66181135-66181154 | Msa0656850:CDS | 45.0% |
| !! | ACTCTTTTAGGTGACCCAGA+GGG | + | chr4_3:66181193-66181212 | Msa0656850:CDS | 45.0% |
| TCGGAACAAGATTGTACCTG+TGG | - | chr4_3:66181220-66181239 | None:intergenic | 45.0% | |
| ! | ACAATCGGGATCCTCTAAAG+TGG | - | chr4_3:66181416-66181435 | None:intergenic | 45.0% |
| ATAGAACTGGTGAGTGGTGA+TGG | + | chr4_3:66181597-66181616 | Msa0656850:intron | 45.0% | |
| TTAGCATTGCACAACACACC+CGG | - | chr4_3:66181725-66181744 | None:intergenic | 45.0% | |
| TTGAAGTGAAATCACCCGCT+AGG | - | chr4_3:66181767-66181786 | None:intergenic | 45.0% | |
| !! | ATATAATTAATTAAATGTAA+AGG | - | chr4_3:66178577-66178596 | None:intergenic | 5.0% |
| AGGTGAAATTGGGCTGTGGA+CGG | - | chr4_3:66176314-66176333 | None:intergenic | 50.0% | |
| GAGGTTGGGGAGGTGAAATT+GGG | - | chr4_3:66176324-66176343 | None:intergenic | 50.0% | |
| TGAACTACGATGGGAGGAGA+CGG | - | chr4_3:66176346-66176365 | None:intergenic | 50.0% | |
| GGATCTTGAACTACGATGGG+AGG | - | chr4_3:66176352-66176371 | None:intergenic | 50.0% | |
| CGGAGGATCTTGAACTACGA+TGG | - | chr4_3:66176356-66176375 | None:intergenic | 50.0% | |
| ATCGTGGTCATGGTGATCGT+CGG | - | chr4_3:66176407-66176426 | None:intergenic | 50.0% | |
| ATGGTGAGAGACGTCGTAAG+CGG | - | chr4_3:66176440-66176459 | None:intergenic | 50.0% | |
| TGGATATGCGGGAATTGAGG+AGG | + | chr4_3:66176588-66176607 | Msa0656850:CDS | 50.0% | |
| AAGGTGTGCCTGATTCTGCT+GGG | + | chr4_3:66176621-66176640 | Msa0656850:CDS | 50.0% | |
| GAACGTATCCCAGCAGAATC+AGG | - | chr4_3:66176632-66176651 | None:intergenic | 50.0% | |
| CATCTCAGATTATGGGGTGG+AGG | + | chr4_3:66177037-66177056 | Msa0656850:intron | 50.0% | |
| TCTCAGATTATGGGGTGGAG+GGG | + | chr4_3:66177039-66177058 | Msa0656850:intron | 50.0% | |
| ! | CTGGTCTTCCCAAGACTCAA+AGG | - | chr4_3:66177490-66177509 | None:intergenic | 50.0% |
| GTCTTGGGAAGACCAGTGTA+TGG | + | chr4_3:66177494-66177513 | Msa0656850:CDS | 50.0% | |
| ! | CAGGTGGACTTAGCAAAGCA+TGG | - | chr4_3:66178548-66178567 | None:intergenic | 50.0% |
| ! | TTTTGTGGAAAGCCCTGGAG+AGG | + | chr4_3:66179176-66179195 | Msa0656850:intron | 50.0% |
| GAAAGCCCTGGAGAGGAAAA+GGG | + | chr4_3:66179183-66179202 | Msa0656850:intron | 50.0% | |
| AAGCTCCCTCATACCTATCC+TGG | - | chr4_3:66179234-66179253 | None:intergenic | 50.0% | |
| ACTAGTGTGAGGACGCAAGA+TGG | + | chr4_3:66179256-66179275 | Msa0656850:intron | 50.0% | |
| CTAGTGTGAGGACGCAAGAT+GGG | + | chr4_3:66179257-66179276 | Msa0656850:intron | 50.0% | |
| TAGTGTGAGGACGCAAGATG+GGG | + | chr4_3:66179258-66179277 | Msa0656850:intron | 50.0% | |
| AAGGACTTAGGGTTGACCCT+TGG | - | chr4_3:66179318-66179337 | None:intergenic | 50.0% | |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | + | chr4_3:66179419-66179438 | Msa0656850:intron | 50.0% |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | + | chr4_3:66179420-66179439 | Msa0656850:intron | 50.0% |
| GAGTCGAGGGAGGAGTTAAA+TGG | + | chr4_3:66179433-66179452 | Msa0656850:intron | 50.0% | |
| TAAATGGGAGGCTAGAGACC+TGG | + | chr4_3:66179449-66179468 | Msa0656850:intron | 50.0% | |
| ! | AGGCAAGCCTTAGAAGCGTA+TGG | + | chr4_3:66179472-66179491 | Msa0656850:intron | 50.0% |
| GCAGAAGCCATACGCTTCTA+AGG | - | chr4_3:66179482-66179501 | None:intergenic | 50.0% | |
| CTGCCTGAGTAGAAGCAAGA+CGG | + | chr4_3:66179498-66179517 | Msa0656850:intron | 50.0% | |
| ACTCCGTCTTGCTTCTACTC+AGG | - | chr4_3:66179504-66179523 | None:intergenic | 50.0% | |
| AAGGAGAAGTGGGTCTACCT+TGG | + | chr4_3:66179546-66179565 | Msa0656850:intron | 50.0% | |
| ACAACAACAGTCAGACCGGA+CGG | + | chr4_3:66179761-66179780 | Msa0656850:intron | 50.0% | |
| CGGAGATGAGGATGTTGTGA+TGG | + | chr4_3:66179829-66179848 | Msa0656850:intron | 50.0% | |
| CTACCCCACTCTCTCTCTAA+TGG | - | chr4_3:66179895-66179914 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr4_3:66180155-66180174 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4_3:66180161-66180180 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4_3:66180158-66180177 | Msa0656850:intron | 50.0% | |
| GAACGCATCAGCTTCAGCAA+AGG | - | chr4_3:66180394-66180413 | None:intergenic | 50.0% | |
| !! | CACTCTTTTAGGTGACCCAG+AGG | + | chr4_3:66181192-66181211 | Msa0656850:CDS | 50.0% |
| ATTGTACCTGTGGACCCTCT+GGG | - | chr4_3:66181210-66181229 | None:intergenic | 50.0% | |
| !! | GGTGAGTGGTGATGGTAGAT+CGG | + | chr4_3:66181605-66181624 | Msa0656850:intron | 50.0% |
| !! | GTGAGTGGTGATGGTAGATC+GGG | + | chr4_3:66181606-66181625 | Msa0656850:intron | 50.0% |
| TTCTGCAGGAGACTCTTCTC+CGG | + | chr4_3:66181703-66181722 | Msa0656850:intron | 50.0% | |
| AAGTGAAATCACCCGCTAGG+AGG | - | chr4_3:66181764-66181783 | None:intergenic | 50.0% | |
| ! | AGAGGATTCTTCGGTGGTGG+TGG | - | chr4_3:66176290-66176309 | None:intergenic | 55.0% |
| GTGGACGGGAGAGGATTCTT+CGG | - | chr4_3:66176299-66176318 | None:intergenic | 55.0% | |
| GGTGAAATTGGGCTGTGGAC+GGG | - | chr4_3:66176313-66176332 | None:intergenic | 55.0% | |
| GGAGGTTGGGGAGGTGAAAT+TGG | - | chr4_3:66176325-66176344 | None:intergenic | 55.0% | |
| ! | AAGGAGGCACATCGTGGTCA+TGG | - | chr4_3:66176417-66176436 | None:intergenic | 55.0% |
| TGAGAGACGTCGTAAGCGGA+AGG | - | chr4_3:66176436-66176455 | None:intergenic | 55.0% | |
| CAAGGTGTGCCTGATTCTGC+TGG | + | chr4_3:66176620-66176639 | Msa0656850:CDS | 55.0% | |
| ! | GATGACCAAAGCGCTCGATC+CGG | - | chr4_3:66176917-66176936 | None:intergenic | 55.0% |
| ATGATGCCGCCAAACGTGAC+AGG | + | chr4_3:66177425-66177444 | Msa0656850:CDS | 55.0% | |
| TGATGCCGCCAAACGTGACA+GGG | + | chr4_3:66177426-66177445 | Msa0656850:CDS | 55.0% | |
| ! | TTTGACGCGTGATGGAGCGA+CGG | + | chr4_3:66179087-66179106 | Msa0656850:intron | 55.0% |
| GGAAAGCCCTGGAGAGGAAA+AGG | + | chr4_3:66179182-66179201 | Msa0656850:intron | 55.0% | |
| ! | CCTCACCCTTTTCCTCTCCA+GGG | - | chr4_3:66179191-66179210 | None:intergenic | 55.0% |
| ! | TCCTCACCCTTTTCCTCTCC+AGG | - | chr4_3:66179192-66179211 | None:intergenic | 55.0% |
| AGGGAGCTTCGACTAGTGTG+AGG | + | chr4_3:66179245-66179264 | Msa0656850:intron | 55.0% | |
| CGAGGGAGGAGTTAAATGGG+AGG | + | chr4_3:66179437-66179456 | Msa0656850:intron | 55.0% | |
| GAGAAGTGGGTCTACCTTGG+AGG | + | chr4_3:66179549-66179568 | Msa0656850:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr4_3:66180147-66180166 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr4_3:66180146-66180165 | Msa0656850:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr4_3:66180147-66180166 | Msa0656850:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr4_3:66180153-66180172 | Msa0656850:intron | 55.0% | |
| GATTGTACCTGTGGACCCTC+TGG | - | chr4_3:66181211-66181230 | None:intergenic | 55.0% | |
| TCTGCAGGAGACTCTTCTCC+GGG | + | chr4_3:66181704-66181723 | Msa0656850:intron | 55.0% | |
| !! | TTCTTCGGTGGTGGTGGTGG+TGG | - | chr4_3:66176284-66176303 | None:intergenic | 60.0% |
| !! | GGATTCTTCGGTGGTGGTGG+TGG | - | chr4_3:66176287-66176306 | None:intergenic | 60.0% |
| GGGAGAGGATTCTTCGGTGG+TGG | - | chr4_3:66176293-66176312 | None:intergenic | 60.0% | |
| GACGGGAGAGGATTCTTCGG+TGG | - | chr4_3:66176296-66176315 | None:intergenic | 60.0% | |
| AATTGGGCTGTGGACGGGAG+AGG | - | chr4_3:66176308-66176327 | None:intergenic | 60.0% | |
| GGGGAGGTGAAATTGGGCTG+TGG | - | chr4_3:66176318-66176337 | None:intergenic | 60.0% | |
| ATGGGAGGAGACGGAGGTTG+GGG | - | chr4_3:66176337-66176356 | None:intergenic | 60.0% | |
| GATGGGAGGAGACGGAGGTT+GGG | - | chr4_3:66176338-66176357 | None:intergenic | 60.0% | |
| ACTACGATGGGAGGAGACGG+AGG | - | chr4_3:66176343-66176362 | None:intergenic | 60.0% | |
| ! | AAGCGGAAGGAGGCACATCG+TGG | - | chr4_3:66176423-66176442 | None:intergenic | 60.0% |
| GAGACGTCGTAAGCGGAAGG+AGG | - | chr4_3:66176433-66176452 | None:intergenic | 60.0% | |
| TTCCACCGGATCGAGCGCTT+TGG | + | chr4_3:66176909-66176928 | Msa0656850:CDS | 60.0% | |
| CAAGGCCCTGTCACGTTTGG+CGG | - | chr4_3:66177434-66177453 | None:intergenic | 60.0% | |
| GAGCAAGGCCCTGTCACGTT+TGG | - | chr4_3:66177437-66177456 | None:intergenic | 60.0% | |
| TGTGCCTGGGAGGTCGACTA+TGG | + | chr4_3:66179049-66179068 | Msa0656850:intron | 60.0% | |
| GCTTCCATAGTCGACCTCCC+AGG | - | chr4_3:66179056-66179075 | None:intergenic | 60.0% | |
| CCCTGGAGAGGAAAAGGGTG+AGG | + | chr4_3:66179188-66179207 | Msa0656850:intron | 60.0% | |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | + | chr4_3:66179423-66179442 | Msa0656850:intron | 60.0% |
| ATGGGAGGCTAGAGACCTGG+AGG | + | chr4_3:66179452-66179471 | Msa0656850:intron | 60.0% | |
| !! | CGCTTCTAAGGCTTGCCTCC+AGG | - | chr4_3:66179470-66179489 | None:intergenic | 60.0% |
| AGTCAGACCGGACGGAGTGT+TGG | + | chr4_3:66179769-66179788 | Msa0656850:intron | 60.0% | |
| ! | GTCAGACCGGACGGAGTGTT+GGG | + | chr4_3:66179770-66179789 | Msa0656850:intron | 60.0% |
| TAACCGCCCAACACTCCGTC+CGG | - | chr4_3:66179779-66179798 | None:intergenic | 60.0% | |
| CATTCGCAAGCGCCTCCTAG+CGG | + | chr4_3:66181749-66181768 | Msa0656850:CDS | 60.0% | |
| ATTCGCAAGCGCCTCCTAGC+GGG | + | chr4_3:66181750-66181769 | Msa0656850:CDS | 60.0% | |
| GCGGGGGAGTGAGGAACAGT+GGG | - | chr4_3:66176247-66176266 | None:intergenic | 65.0% | |
| !! | TTCGGTGGTGGTGGTGGTGG+TGG | - | chr4_3:66176281-66176300 | None:intergenic | 65.0% |
| CGATGGGAGGAGACGGAGGT+TGG | - | chr4_3:66176339-66176358 | None:intergenic | 65.0% | |
| ! | GACCAAAGCGCTCGATCCGG+TGG | - | chr4_3:66176914-66176933 | None:intergenic | 65.0% |
| !! | AGACCGGACGGAGTGTTGGG+CGG | + | chr4_3:66179773-66179792 | Msa0656850:intron | 65.0% |
| AGGTGACCCAGAGGGTCCAC+AGG | + | chr4_3:66181201-66181220 | Msa0656850:CDS | 65.0% | |
| GGCGGGGGAGTGAGGAACAG+TGG | - | chr4_3:66176248-66176267 | None:intergenic | 70.0% | |
| TGTTCCTCACTCCCCCGCCG+CGG | + | chr4_3:66176249-66176268 | Msa0656850:CDS | 70.0% | |
| !! | GGTGGTGGTGGTGGTAGCCG+CGG | - | chr4_3:66176269-66176288 | None:intergenic | 70.0% |
| !! | GGTGGTGGTGGTGGTGGTGG+TGG | - | chr4_3:66176275-66176294 | None:intergenic | 70.0% |
| GGAGGAGACGGAGGTTGGGG+AGG | - | chr4_3:66176334-66176353 | None:intergenic | 70.0% | |
| !! | TGGTGGTGGTAGCCGCGGCG+GGG | - | chr4_3:66176264-66176283 | None:intergenic | 75.0% |
| !! | GTGGTGGTGGTAGCCGCGGC+GGG | - | chr4_3:66176265-66176284 | None:intergenic | 75.0% |
| !! | GGTGGTGGTGGTAGCCGCGG+CGG | - | chr4_3:66176266-66176285 | None:intergenic | 75.0% |
| ! | GTAGCCGCGGCGGGGGAGTG+AGG | - | chr4_3:66176256-66176275 | None:intergenic | 80.0% |
| !! | GGTGGTGGTAGCCGCGGCGG+GGG | - | chr4_3:66176263-66176282 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 66176106 | 66181986 | 66176106 | ID=Msa0656850;Name=Msa0656850 |
| chr4_3 | mRNA | 66176106 | 66181986 | 66176106 | ID=Msa0656850-mRNA-1;Parent=Msa0656850;Name=Msa0656850-mRNA-1;_AED=0.07;_eAED=0.07;_QI=87|1|1|1|1|1|9|114|440 |
| chr4_3 | exon | 66176106 | 66176477 | 66176106 | ID=Msa0656850-mRNA-1:exon:18915;Parent=Msa0656850-mRNA-1 |
| chr4_3 | exon | 66176572 | 66176664 | 66176572 | ID=Msa0656850-mRNA-1:exon:18916;Parent=Msa0656850-mRNA-1 |
| chr4_3 | exon | 66176893 | 66176997 | 66176893 | ID=Msa0656850-mRNA-1:exon:18917;Parent=Msa0656850-mRNA-1 |
| chr4_3 | exon | 66177379 | 66177531 | 66177379 | ID=Msa0656850-mRNA-1:exon:18918;Parent=Msa0656850-mRNA-1 |
| chr4_3 | exon | 66178081 | 66178179 | 66178081 | ID=Msa0656850-mRNA-1:exon:18919;Parent=Msa0656850-mRNA-1 |
| chr4_3 | exon | 66178280 | 66178408 | 66178280 | ID=Msa0656850-mRNA-1:exon:18920;Parent=Msa0656850-mRNA-1 |
| chr4_3 | exon | 66180390 | 66180569 | 66180390 | ID=Msa0656850-mRNA-1:exon:18921;Parent=Msa0656850-mRNA-1 |
| chr4_3 | exon | 66181106 | 66181222 | 66181106 | ID=Msa0656850-mRNA-1:exon:18922;Parent=Msa0656850-mRNA-1 |
| chr4_3 | exon | 66181711 | 66181986 | 66181711 | ID=Msa0656850-mRNA-1:exon:18923;Parent=Msa0656850-mRNA-1 |
| chr4_3 | five_prime_UTR | 66176106 | 66176192 | 66176106 | ID=Msa0656850-mRNA-1:five_prime_utr;Parent=Msa0656850-mRNA-1 |
| chr4_3 | CDS | 66176193 | 66176477 | 66176193 | ID=Msa0656850-mRNA-1:cds;Parent=Msa0656850-mRNA-1 |
| chr4_3 | CDS | 66176572 | 66176664 | 66176572 | ID=Msa0656850-mRNA-1:cds;Parent=Msa0656850-mRNA-1 |
| chr4_3 | CDS | 66176893 | 66176997 | 66176893 | ID=Msa0656850-mRNA-1:cds;Parent=Msa0656850-mRNA-1 |
| chr4_3 | CDS | 66177379 | 66177531 | 66177379 | ID=Msa0656850-mRNA-1:cds;Parent=Msa0656850-mRNA-1 |
| chr4_3 | CDS | 66178081 | 66178179 | 66178081 | ID=Msa0656850-mRNA-1:cds;Parent=Msa0656850-mRNA-1 |
| chr4_3 | CDS | 66178280 | 66178408 | 66178280 | ID=Msa0656850-mRNA-1:cds;Parent=Msa0656850-mRNA-1 |
| chr4_3 | CDS | 66180390 | 66180569 | 66180390 | ID=Msa0656850-mRNA-1:cds;Parent=Msa0656850-mRNA-1 |
| chr4_3 | CDS | 66181106 | 66181222 | 66181106 | ID=Msa0656850-mRNA-1:cds;Parent=Msa0656850-mRNA-1 |
| chr4_3 | CDS | 66181711 | 66181872 | 66181711 | ID=Msa0656850-mRNA-1:cds;Parent=Msa0656850-mRNA-1 |
| chr4_3 | three_prime_UTR | 66181873 | 66181986 | 66181873 | ID=Msa0656850-mRNA-1:three_prime_utr;Parent=Msa0656850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
