Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1420700 | sp|Q9NVG8|TBC13_HUMAN | 43.548 | 248 | 133 | 5 | 160 | 403 | 153 | 397 | 2.23e-59 | 201 |
| Msa1420700 | sp|Q9NVG8|TBC13_HUMAN | 32.331 | 133 | 71 | 3 | 103 | 233 | 23 | 138 | 7.54e-14 | 76.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1420700 | G7LHV3 | 90.745 | 443 | 5 | 2 | 1 | 407 | 1 | 443 | 0.0 | 809 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1420700 | 0.809114 | 2.220194e-50 | -8.615850e-47 |
| Msa0656850 | Msa1420700 | 0.924640 | 5.373492e-90 | -8.615850e-47 |
| Msa1236070 | Msa1420700 | 0.805803 | 1.118981e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1420700 | MtrunA17_Chr8g0378291 | 90.745 | 443 | 5 | 2 | 1 | 407 | 1 | 443 | 0.0 | 809 |
| Msa1420700 | MtrunA17_Chr3g0121451 | 64.773 | 440 | 114 | 3 | 1 | 407 | 1 | 432 | 0.0 | 566 |
| Msa1420700 | MtrunA17_Chr4g0063771 | 53.441 | 247 | 81 | 2 | 187 | 399 | 48 | 294 | 4.99e-86 | 264 |
| Msa1420700 | MtrunA17_Chr4g0033831 | 27.003 | 337 | 210 | 6 | 71 | 394 | 116 | 429 | 4.72e-26 | 109 |
| Msa1420700 | MtrunA17_Chr2g0329691 | 27.419 | 310 | 187 | 8 | 96 | 391 | 134 | 419 | 6.66e-25 | 105 |
| Msa1420700 | MtrunA17_Chr4g0064141 | 28.231 | 294 | 170 | 12 | 99 | 384 | 351 | 611 | 2.80e-21 | 96.3 |
| Msa1420700 | MtrunA17_Chr1g0183581 | 27.698 | 278 | 156 | 10 | 106 | 354 | 68 | 329 | 1.89e-20 | 92.8 |
| Msa1420700 | MtrunA17_Chr4g0041821 | 31.061 | 132 | 78 | 3 | 215 | 346 | 204 | 322 | 1.44e-15 | 78.2 |
| Msa1420700 | MtrunA17_Chr2g0329651 | 31.343 | 134 | 74 | 4 | 215 | 346 | 398 | 515 | 1.27e-13 | 72.8 |
| Msa1420700 | MtrunA17_Chr1g0146661 | 24.876 | 201 | 113 | 7 | 215 | 395 | 387 | 569 | 4.68e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1420700 | AT4G13730.1 | 61.268 | 426 | 102 | 5 | 39 | 405 | 28 | 449 | 0.0 | 523 |
| Msa1420700 | AT1G04830.1 | 57.271 | 447 | 143 | 4 | 1 | 403 | 1 | 443 | 0.0 | 511 |
| Msa1420700 | AT4G13730.3 | 59.859 | 426 | 97 | 6 | 39 | 405 | 28 | 438 | 2.93e-178 | 504 |
| Msa1420700 | AT1G04830.2 | 56.621 | 438 | 142 | 4 | 1 | 394 | 1 | 434 | 2.29e-174 | 495 |
| Msa1420700 | AT1G04830.3 | 55.529 | 416 | 156 | 5 | 1 | 403 | 1 | 400 | 3.41e-157 | 449 |
| Msa1420700 | AT4G13730.2 | 58.400 | 375 | 93 | 5 | 39 | 354 | 28 | 398 | 2.24e-150 | 432 |
| Msa1420700 | AT2G30710.1 | 28.526 | 312 | 185 | 8 | 96 | 393 | 126 | 413 | 2.72e-26 | 110 |
| Msa1420700 | AT2G20440.3 | 25.185 | 270 | 163 | 9 | 101 | 346 | 57 | 311 | 1.81e-20 | 92.4 |
| Msa1420700 | AT2G20440.1 | 25.556 | 270 | 162 | 10 | 101 | 346 | 57 | 311 | 3.54e-20 | 92.4 |
| Msa1420700 | AT2G20440.2 | 25.556 | 270 | 162 | 10 | 101 | 346 | 57 | 311 | 3.54e-20 | 92.4 |
| Msa1420700 | AT4G28550.3 | 26.316 | 285 | 171 | 8 | 101 | 361 | 57 | 326 | 4.65e-19 | 88.2 |
| Msa1420700 | AT4G28550.2 | 26.766 | 269 | 158 | 8 | 101 | 345 | 57 | 310 | 1.65e-18 | 86.3 |
| Msa1420700 | AT4G28550.1 | 26.667 | 270 | 159 | 8 | 101 | 346 | 57 | 311 | 2.12e-18 | 87.0 |
| Msa1420700 | AT2G20440.4 | 31.111 | 135 | 80 | 3 | 212 | 346 | 74 | 195 | 3.05e-15 | 76.6 |
| Msa1420700 | AT4G27100.2 | 31.061 | 132 | 78 | 3 | 215 | 346 | 199 | 317 | 2.84e-13 | 71.6 |
| Msa1420700 | AT4G27100.1 | 31.061 | 132 | 78 | 3 | 215 | 346 | 199 | 317 | 3.47e-13 | 71.2 |
Find 115 sgRNAs with CRISPR-Local
Find 449 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTGACAGCCTTCATATT+TGG | 0.129257 | tig0024837:+42480 | Msa1420700:CDS |
| GGAGGTTGGGGAGGTGAAAT+TGG | 0.209496 | tig0024837:-37642 | None:intergenic |
| TTTCGTGTACAGTCAGTCTA+AGG | 0.270139 | tig0024837:+43163 | Msa1420700:CDS |
| CCAAGGGATGAATGAGTTAT+TGG | 0.275612 | tig0024837:+39658 | Msa1420700:CDS |
| TGACTGTACACGAAACTTAT+TGG | 0.277194 | tig0024837:-43155 | None:intergenic |
| ATCCCCAATTCTATGCATTT+AGG | 0.289787 | tig0024837:+42423 | Msa1420700:CDS |
| TGCTGACAGCCTTCATATTT+GGG | 0.302632 | tig0024837:+42481 | Msa1420700:CDS |
| TCCACCTAAATGCATAGAAT+TGG | 0.362457 | tig0024837:-42427 | None:intergenic |
| CCACCTAAATGCATAGAATT+GGG | 0.363506 | tig0024837:-42426 | None:intergenic |
| CAAGGTGTGCCTGATTCTGC+TGG | 0.370235 | tig0024837:+37940 | Msa1420700:CDS |
| GTGGTGGTGGTAGCCGCGGC+GGG | 0.372911 | tig0024837:-37582 | None:intergenic |
| GATGGGAGGAGACGGAGGTT+GGG | 0.375456 | tig0024837:-37655 | None:intergenic |
| ATGAGCATCCTTTGAGTCTT+GGG | 0.382293 | tig0024837:+38799 | Msa1420700:CDS |
| GATTGTACCTGTGGACCCTC+TGG | 0.387698 | tig0024837:-42521 | None:intergenic |
| GAACGTATCCCAGCAGAATC+AGG | 0.398899 | tig0024837:-37949 | None:intergenic |
| GGTGGTGGTAGCCGCGGCGG+GGG | 0.399551 | tig0024837:-37580 | None:intergenic |
| ATGGGAGGAGACGGAGGTTG+GGG | 0.399846 | tig0024837:-37654 | None:intergenic |
| CCTTGGACATACTTTACTCC+TGG | 0.415852 | tig0024837:-39641 | None:intergenic |
| AATTGAATTCCTGAGTCAAT+AGG | 0.428026 | tig0024837:-42457 | None:intergenic |
| CGATGGGAGGAGACGGAGGT+TGG | 0.428180 | tig0024837:-37656 | None:intergenic |
| GAGAGAGCTGTTAAGCCAAT+CGG | 0.429636 | tig0024837:-37532 | None:intergenic |
| GATGAGCATCCTTTGAGTCT+TGG | 0.430115 | tig0024837:+38798 | Msa1420700:CDS |
| GGAGGAGACGGAGGTTGGGG+AGG | 0.432198 | tig0024837:-37651 | None:intergenic |
| GGTGGTGGTGGTAGCCGCGG+CGG | 0.442943 | tig0024837:-37583 | None:intergenic |
| GAGCAAGGCCCTGTCACGTT+TGG | 0.443402 | tig0024837:-38754 | None:intergenic |
| CAACTAGACAATAGTGTTGT+GGG | 0.444669 | tig0024837:+41777 | Msa1420700:CDS |
| GGATTCTTCGGTGGTGGTGG+TGG | 0.445126 | tig0024837:-37604 | None:intergenic |
| TTAGAGTCATTTACAAACAT+TGG | 0.446330 | tig0024837:-43237 | None:intergenic |
| TGTAAATGACTCTAAATTTG+AGG | 0.447123 | tig0024837:+43245 | Msa1420700:three_prime_UTR |
| TTCTTCGGTGGTGGTGGTGG+TGG | 0.447749 | tig0024837:-37601 | None:intergenic |
| ATGATGCCGCCAAACGTGAC+AGG | 0.452162 | tig0024837:+38745 | Msa1420700:CDS |
| GAGGTTGGGGAGGTGAAATT+GGG | 0.454258 | tig0024837:-37641 | None:intergenic |
| TGGTGGTGGTAGCCGCGGCG+GGG | 0.455632 | tig0024837:-37581 | None:intergenic |
| CCAATAACTCATTCATCCCT+TGG | 0.457394 | tig0024837:-39658 | None:intergenic |
| TTCTGCAGGAGACTCTTCTC+CGG | 0.461362 | tig0024837:+43014 | Msa1420700:intron |
| GGTGAAATTGGGCTGTGGAC+GGG | 0.462866 | tig0024837:-37630 | None:intergenic |
| ATTCGCAAGCGCCTCCTAGC+GGG | 0.468068 | tig0024837:+43061 | Msa1420700:CDS |
| GAGCAAATGGCTAATGTTTG+TGG | 0.469058 | tig0024837:-43125 | None:intergenic |
| AGGATGTACAACTCCACTAT+TGG | 0.471200 | tig0024837:+38714 | Msa1420700:CDS |
| TATTGGCAACATAGAGCAAA+TGG | 0.475487 | tig0024837:-43138 | None:intergenic |
| CAAGGCCCTGTCACGTTTGG+CGG | 0.478192 | tig0024837:-38751 | None:intergenic |
| ATCATCAGCATCACCAATAG+TGG | 0.481244 | tig0024837:-38727 | None:intergenic |
| GAGATACAAAAGCAAAATGC+GGG | 0.485520 | tig0024837:-43196 | None:intergenic |
| AGAGGATTCTTCGGTGGTGG+TGG | 0.488706 | tig0024837:-37607 | None:intergenic |
| TGATGGATATGCGGGAATTG+AGG | 0.491397 | tig0024837:+37905 | Msa1420700:CDS |
| TTTGGTTCAGTTGTCGAAGA+AGG | 0.493660 | tig0024837:+37882 | Msa1420700:intron |
| TTCCACCGGATCGAGCGCTT+TGG | 0.498866 | tig0024837:+38229 | Msa1420700:CDS |
| AGGTGAAATTGGGCTGTGGA+CGG | 0.501179 | tig0024837:-37631 | None:intergenic |
| ATTGGCTTAACAGCTCTCTC+TGG | 0.514874 | tig0024837:+37535 | Msa1420700:CDS |
| TCTGCAGGAGACTCTTCTCC+GGG | 0.520583 | tig0024837:+43015 | Msa1420700:intron |
| AGAGAGCTGTTAAGCCAATC+GGG | 0.522903 | tig0024837:-37531 | None:intergenic |
| GGGAGAGGATTCTTCGGTGG+TGG | 0.524785 | tig0024837:-37610 | None:intergenic |
| AAGGAGGCACATCGTGGTCA+TGG | 0.525068 | tig0024837:-37734 | None:intergenic |
| TGTATGGAATCAGTTCTTCC+AGG | 0.526492 | tig0024837:+38830 | Msa1420700:CDS |
| AATTGGGCTGTGGACGGGAG+AGG | 0.526572 | tig0024837:-37625 | None:intergenic |
| AAAGAGTGTCCCAAATATGA+AGG | 0.535343 | tig0024837:-42490 | None:intergenic |
| GTGGACGGGAGAGGATTCTT+CGG | 0.540862 | tig0024837:-37616 | None:intergenic |
| CCCAATTCTATGCATTTAGG+TGG | 0.542027 | tig0024837:+42426 | Msa1420700:CDS |
| GATGACCAAAGCGCTCGATC+CGG | 0.543453 | tig0024837:-38234 | None:intergenic |
| TCAATTATCTGCTTAGGCGG+AGG | 0.544656 | tig0024837:-37690 | None:intergenic |
| CCAGGAGTAAAGTATGTCCA+AGG | 0.545746 | tig0024837:+39641 | Msa1420700:CDS |
| GTCTTGGGAAGACCAGTGTA+TGG | 0.548559 | tig0024837:+38814 | Msa1420700:CDS |
| AATGGCTAATGTTTGTGGAC+GGG | 0.557969 | tig0024837:-43120 | None:intergenic |
| ATTGTACCTGTGGACCCTCT+GGG | 0.559228 | tig0024837:-42520 | None:intergenic |
| AGGTGACCCAGAGGGTCCAC+AGG | 0.559474 | tig0024837:+42514 | Msa1420700:CDS |
| GAAGAAGGTGATGGATATGC+GGG | 0.560352 | tig0024837:+37897 | Msa1420700:CDS |
| GAATCTTCAATTATCTGCTT+AGG | 0.560421 | tig0024837:-37696 | None:intergenic |
| GACCAAAGCGCTCGATCCGG+TGG | 0.561984 | tig0024837:-38231 | None:intergenic |
| CGGAGGATCTTGAACTACGA+TGG | 0.565129 | tig0024837:-37673 | None:intergenic |
| ACAACTAGACAATAGTGTTG+TGG | 0.571818 | tig0024837:+41776 | Msa1420700:CDS |
| TGAAGAAGAAAGTTCCCGAT+TGG | 0.572438 | tig0024837:+37517 | Msa1420700:CDS |
| CTGGGATACGTTCTACATTG+TGG | 0.573104 | tig0024837:+37959 | Msa1420700:CDS |
| TTTGCTTGGATATCTTCCAC+CGG | 0.578588 | tig0024837:+38215 | Msa1420700:CDS |
| TCAGTTGTCGAAGAAGGTGA+TGG | 0.579146 | tig0024837:+37888 | Msa1420700:intron |
| CTGGTCTTCCCAAGACTCAA+AGG | 0.582046 | tig0024837:-38807 | None:intergenic |
| AAATGGCTAATGTTTGTGGA+CGG | 0.587156 | tig0024837:-43121 | None:intergenic |
| AAGGTGTGCCTGATTCTGCT+GGG | 0.588507 | tig0024837:+37941 | Msa1420700:CDS |
| GGGGAGGTGAAATTGGGCTG+TGG | 0.597013 | tig0024837:-37635 | None:intergenic |
| TGATGCCGCCAAACGTGACA+GGG | 0.597721 | tig0024837:+38746 | Msa1420700:CDS |
| CACCTAAATGCATAGAATTG+GGG | 0.597939 | tig0024837:-42425 | None:intergenic |
| TTCGTGTACAGTCAGTCTAA+GGG | 0.598813 | tig0024837:+43164 | Msa1420700:CDS |
| TGAACTACGATGGGAGGAGA+CGG | 0.599786 | tig0024837:-37663 | None:intergenic |
| ATCGTGGTCATGGTGATCGT+CGG | 0.601526 | tig0024837:-37724 | None:intergenic |
| GATCACTCTCCTATTGACTC+AGG | 0.601704 | tig0024837:+42448 | Msa1420700:CDS |
| AATTTCTGATCTAGAGAGCA+AGG | 0.603350 | tig0024837:-38769 | None:intergenic |
| CGAAGAAGGTGATGGATATG+CGG | 0.604704 | tig0024837:+37896 | Msa1420700:CDS |
| GAAAACATGATGAAGAGTTG+TGG | 0.605842 | tig0024837:+41838 | Msa1420700:CDS |
| TTGAAGTGAAATCACCCGCT+AGG | 0.608053 | tig0024837:-43075 | None:intergenic |
| GGAGGATCTTGAACTACGAT+GGG | 0.609089 | tig0024837:-37672 | None:intergenic |
| GAACGCATCAGCTTCAGCAA+AGG | 0.610521 | tig0024837:-41706 | None:intergenic |
| ATGGTGAGAGACGTCGTAAG+CGG | 0.612342 | tig0024837:-37757 | None:intergenic |
| CTCAAAGGATGCTCATCATG+AGG | 0.616214 | tig0024837:-38792 | None:intergenic |
| CATTCGCAAGCGCCTCCTAG+CGG | 0.617934 | tig0024837:+43060 | Msa1420700:CDS |
| CTAGCTAGTCAGAAATCACA+AGG | 0.621456 | tig0024837:+38691 | Msa1420700:intron |
| TTAGCATTGCACAACACACC+CGG | 0.621818 | tig0024837:-43033 | None:intergenic |
| CATCTGAATTAGCTAAGAAG+AGG | 0.622349 | tig0024837:+38253 | Msa1420700:CDS |
| TCTTCAATTATCTGCTTAGG+CGG | 0.629345 | tig0024837:-37693 | None:intergenic |
| TGAGAGACGTCGTAAGCGGA+AGG | 0.629928 | tig0024837:-37753 | None:intergenic |
| CCTCAGTCAATAATTGAGCA+TGG | 0.630182 | tig0024837:-37776 | None:intergenic |
| AGAGATACAAAAGCAAAATG+CGG | 0.636518 | tig0024837:-43197 | None:intergenic |
| AAGTGAAATCACCCGCTAGG+AGG | 0.642330 | tig0024837:-43072 | None:intergenic |
| TTGAGGAGGATCTCATGTCA+AGG | 0.643029 | tig0024837:+37922 | Msa1420700:CDS |
| TGGATATGCGGGAATTGAGG+AGG | 0.644082 | tig0024837:+37908 | Msa1420700:CDS |
| CAGGAGTAAAGTATGTCCAA+GGG | 0.651387 | tig0024837:+39642 | Msa1420700:CDS |
| GGATCTTGAACTACGATGGG+AGG | 0.652054 | tig0024837:-37669 | None:intergenic |
| GATACGTTCTACATTGTGGA+AGG | 0.654463 | tig0024837:+37963 | Msa1420700:CDS |
| GACGGGAGAGGATTCTTCGG+TGG | 0.655523 | tig0024837:-37613 | None:intergenic |
| ACAGTACAAACAGTTCAAAG+AGG | 0.670694 | tig0024837:+38278 | Msa1420700:CDS |
| CCATGCTCAATTATTGACTG+AGG | 0.677781 | tig0024837:+37776 | Msa1420700:CDS |
| GAGACGTCGTAAGCGGAAGG+AGG | 0.685988 | tig0024837:-37750 | None:intergenic |
| AGATACAAAAGCAAAATGCG+GGG | 0.688638 | tig0024837:-43195 | None:intergenic |
| ACTACGATGGGAGGAGACGG+AGG | 0.699325 | tig0024837:-37660 | None:intergenic |
| GAAGAACTGATTCCATACAC+TGG | 0.704179 | tig0024837:-38826 | None:intergenic |
| AAGCGGAAGGAGGCACATCG+TGG | 0.724513 | tig0024837:-37740 | None:intergenic |
| GCTAGTCAGAAATCACAAGG+AGG | 0.771386 | tig0024837:+38694 | Msa1420700:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTATTGTTAGTAATA+AGG | + | tig0024837:41599-41618 | Msa1420700:intron | 10.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | tig0024837:39160-39179 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | tig0024837:39159-39178 | Msa1420700:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | tig0024837:39183-39202 | Msa1420700:intron | 15.0% |
| !!! | TCATTTTGAAACAATTTTTT+TGG | + | tig0024837:39285-39304 | Msa1420700:intron | 15.0% |
| !!! | TTTATATTACATATTTTCCT+AGG | + | tig0024837:39940-39959 | Msa1420700:intron | 15.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | - | tig0024837:40656-40675 | None:intergenic | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | + | tig0024837:40655-40674 | Msa1420700:intron | 15.0% |
| !!! | TTTATGTTCTCTTTTATTAT+TGG | + | tig0024837:41645-41664 | Msa1420700:intron | 15.0% |
| !! | TATATTAAAAACACTTACTT+TGG | - | tig0024837:41883-41902 | None:intergenic | 15.0% |
| !! | TATATTAAAAACTCTTACTT+TGG | - | tig0024837:41939-41958 | None:intergenic | 15.0% |
| !!! | ATTTGTTAAATAAACTAACA+TGG | + | tig0024837:42140-42159 | Msa1420700:intron | 15.0% |
| !! | CAATTATTTACAAAGTAAAT+CGG | - | tig0024837:42552-42571 | None:intergenic | 15.0% |
| !! | TTACTTTGTAAATAATTGAT+TGG | + | tig0024837:42554-42573 | Msa1420700:intron | 15.0% |
| !! | TTCTTAAAAGAACTTAAATT+GGG | + | tig0024837:42977-42996 | Msa1420700:intron | 15.0% |
| !! | TTCAACGTATTTGTTTATTA+TGG | + | tig0024837:37820-37839 | Msa1420700:intron | 20.0% |
| !!! | CTATATGTTCTTTTTTGTTA+TGG | + | tig0024837:38129-38148 | Msa1420700:intron | 20.0% |
| !!! | TTCTATTTGCTTTATCTTTT+TGG | + | tig0024837:38650-38669 | Msa1420700:intron | 20.0% |
| !! | TTAAAAAGTCTAGAGATTAA+TGG | - | tig0024837:39004-39023 | None:intergenic | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | + | tig0024837:39126-39145 | Msa1420700:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | tig0024837:39169-39188 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | tig0024837:39246-39265 | Msa1420700:intron | 20.0% |
| !! | TTAACAAGACATTACAAAAA+GGG | - | tig0024837:39830-39849 | None:intergenic | 20.0% |
| !! | GTTACACAAATTATTGTTAA+AGG | - | tig0024837:39968-39987 | None:intergenic | 20.0% |
| !! | AAGTGTATGCATAAATTAAA+GGG | + | tig0024837:40126-40145 | Msa1420700:intron | 20.0% |
| !!! | ACAATTTTGTAATAGTTGAA+CGG | - | tig0024837:41806-41825 | None:intergenic | 20.0% |
| !! | TAACATGGAATATACAAAAA+TGG | + | tig0024837:42155-42174 | Msa1420700:intron | 20.0% |
| !! | AACATGGAATATACAAAAAT+GGG | + | tig0024837:42156-42175 | Msa1420700:intron | 20.0% |
| !!! | ATTGATGGATAAACATAAAA+AGG | - | tig0024837:42264-42283 | None:intergenic | 20.0% |
| !! | AAATACATGGTTGAATAATT+TGG | - | tig0024837:42340-42359 | None:intergenic | 20.0% |
| !! | ATGGAAATAATAAGTTAGAT+TGG | + | tig0024837:42612-42631 | Msa1420700:intron | 20.0% |
| !! | GTTCTTAAAAGAACTTAAAT+TGG | + | tig0024837:42976-42995 | Msa1420700:intron | 20.0% |
| !! | ATCGATGAATTTTACGTTTA+GGG | - | tig0024837:37482-37501 | None:intergenic | 25.0% |
| !! | AATCGATGAATTTTACGTTT+AGG | - | tig0024837:37483-37502 | None:intergenic | 25.0% |
| !! | TTCTTCTTCATCATTTTGAA+CGG | - | tig0024837:37507-37526 | None:intergenic | 25.0% |
| !!! | TGTTTGTGAGTTTTGATTTT+TGG | + | tig0024837:37843-37862 | Msa1420700:intron | 25.0% |
| ! | AATGTTATCATCTCAGATTA+TGG | + | tig0024837:38349-38368 | Msa1420700:intron | 25.0% |
| ! | ATGTTATCATCTCAGATTAT+GGG | + | tig0024837:38350-38369 | Msa1420700:intron | 25.0% |
| !!! | TACTGTTTTTTCTGTTACAT+TGG | + | tig0024837:38567-38586 | Msa1420700:intron | 25.0% |
| ! | TAAATTTGCAAAATCTAACC+AGG | + | tig0024837:39477-39496 | Msa1420700:intron | 25.0% |
| ! | ACAAAAATAAAGGAATAACC+TGG | - | tig0024837:39498-39517 | None:intergenic | 25.0% |
| !!! | AGGTTATTCCTTTATTTTTG+TGG | + | tig0024837:39497-39516 | Msa1420700:intron | 25.0% |
| !!! | TCCTTTATTTTTGTGGAAAT+TGG | + | tig0024837:39504-39523 | Msa1420700:intron | 25.0% |
| ! | ACCAATTTCCACAAAAATAA+AGG | - | tig0024837:39508-39527 | None:intergenic | 25.0% |
| !!! | TTATTTTTGCTGACATTTTC+AGG | + | tig0024837:39577-39596 | Msa1420700:intron | 25.0% |
| !! | TTTTTGAACACATAGAATAG+AGG | - | tig0024837:39686-39705 | None:intergenic | 25.0% |
| ! | TGTAATATTCTTCTCAATGA+TGG | - | tig0024837:39784-39803 | None:intergenic | 25.0% |
| ! | TAACAAGACATTACAAAAAG+GGG | - | tig0024837:39829-39848 | None:intergenic | 25.0% |
| ! | GTTAACAAGACATTACAAAA+AGG | - | tig0024837:39831-39850 | None:intergenic | 25.0% |
| ! | AATTATTGTTAAAGGTTCCT+AGG | - | tig0024837:39960-39979 | None:intergenic | 25.0% |
| !! | CTTTAATTTATGCATACACT+TGG | - | tig0024837:40127-40146 | None:intergenic | 25.0% |
| ! | CAAGTGTATGCATAAATTAA+AGG | + | tig0024837:40125-40144 | Msa1420700:intron | 25.0% |
| ! | AGTGTATGCATAAATTAAAG+GGG | + | tig0024837:40127-40146 | Msa1420700:intron | 25.0% |
| ! | GAGATGACAAATCAAAATTT+AGG | + | tig0024837:40167-40186 | Msa1420700:intron | 25.0% |
| ! | ATTCCAATCTATAAGAACAA+AGG | + | tig0024837:40215-40234 | Msa1420700:intron | 25.0% |
| ! | TTCCAATCTATAAGAACAAA+GGG | + | tig0024837:40216-40235 | Msa1420700:intron | 25.0% |
| !!! | ACACTTAGTTTTCATTGATT+TGG | + | tig0024837:40442-40461 | Msa1420700:intron | 25.0% |
| ! | TATTGTTATGGGAAAATCTA+CGG | - | tig0024837:40606-40625 | None:intergenic | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | - | tig0024837:40648-40667 | None:intergenic | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | - | tig0024837:40649-40668 | None:intergenic | 25.0% |
| ! | ATATTTAAACCGTGTAACTT+GGG | - | tig0024837:40914-40933 | None:intergenic | 25.0% |
| ! | TTACACGGTTTAAATATCTT+GGG | + | tig0024837:40917-40936 | Msa1420700:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | tig0024837:41239-41258 | Msa1420700:intron | 25.0% |
| !!! | GTTTCTCGAATGTTTTTTTT+AGG | - | tig0024837:41364-41383 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | tig0024837:41381-41400 | Msa1420700:intron | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | - | tig0024837:41421-41440 | None:intergenic | 25.0% |
| !! | TTGTTGTTGTATCAGTATAA+AGG | + | tig0024837:41505-41524 | Msa1420700:intron | 25.0% |
| !!! | TTTCGCTTTTAGTTTACATT+TGG | + | tig0024837:41968-41987 | Msa1420700:intron | 25.0% |
| ! | CAAAATAACAATTCTAACAC+AGG | - | tig0024837:42217-42236 | None:intergenic | 25.0% |
| ! | ATTAAACAGTGTTTCAGTAA+TGG | + | tig0024837:42370-42389 | Msa1420700:intron | 25.0% |
| ! | TCTTAAACTGTATATAGAAC+TGG | + | tig0024837:42895-42914 | Msa1420700:intron | 25.0% |
| ! | TTAGAGTCATTTACAAACAT+TGG | - | tig0024837:43240-43259 | None:intergenic | 25.0% |
| ! | TGTAAATGACTCTAAATTTG+AGG | + | tig0024837:43245-43264 | Msa1420700:three_prime_UTR | 25.0% |
| !! | AATTTTACGTTTAGGGTTTC+TGG | - | tig0024837:37475-37494 | None:intergenic | 30.0% |
| GAATCTTCAATTATCTGCTT+AGG | - | tig0024837:37699-37718 | None:intergenic | 30.0% | |
| !!! | GTGAGTTTTGATTTTTGGAA+TGG | + | tig0024837:37848-37867 | Msa1420700:intron | 30.0% |
| !!! | GGAATGGTTTGTTTTTGTTT+TGG | + | tig0024837:37864-37883 | Msa1420700:intron | 30.0% |
| !!! | TATTGATGTCTTGTTTTTCG+CGG | + | tig0024837:38038-38057 | Msa1420700:intron | 30.0% |
| ! | TGTATTGATGATTCCCAAAT+AGG | + | tig0024837:38088-38107 | Msa1420700:intron | 30.0% |
| ! | GTATTGATGATTCCCAAATA+GGG | + | tig0024837:38089-38108 | Msa1420700:intron | 30.0% |
| ! | TATTGATGATTCCCAAATAG+GGG | + | tig0024837:38090-38109 | Msa1420700:intron | 30.0% |
| ACTAACTAAATCCCCTATTT+GGG | - | tig0024837:38104-38123 | None:intergenic | 30.0% | |
| TACTAACTAAATCCCCTATT+TGG | - | tig0024837:38105-38124 | None:intergenic | 30.0% | |
| TGTTATCATCTCAGATTATG+GGG | + | tig0024837:38351-38370 | Msa1420700:intron | 30.0% | |
| ATTCTTTAATCGTGAGTTGT+TGG | + | tig0024837:38393-38412 | Msa1420700:intron | 30.0% | |
| ATGTAAGAACCAATAGAGAT+TGG | - | tig0024837:38471-38490 | None:intergenic | 30.0% | |
| !! | AAACGACACTCATTTTGAAA+CGG | - | tig0024837:39077-39096 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | tig0024837:39078-39097 | Msa1420700:intron | 30.0% |
| TATAATGCTTTGGTATGCAA+AGG | + | tig0024837:39340-39359 | Msa1420700:intron | 30.0% | |
| AAAAACCAATAAGTTCATGC+TGG | - | tig0024837:39558-39577 | None:intergenic | 30.0% | |
| ! | ATTTTTGCGAAGTTAAATCC+AGG | + | tig0024837:39623-39642 | Msa1420700:CDS | 30.0% |
| ! | AAAGCATGGATTACAAAAAG+AGG | - | tig0024837:39853-39872 | None:intergenic | 30.0% |
| TTAAATGTAAAGGAGACTAC+AGG | - | tig0024837:39886-39905 | None:intergenic | 30.0% | |
| AAGAATTACAGGTATGCATA+TGG | - | tig0024837:40044-40063 | None:intergenic | 30.0% | |
| TGGAAAAGGTAAAGAATTAC+AGG | - | tig0024837:40055-40074 | None:intergenic | 30.0% | |
| AAAACATGAAATTCTATGCG+TGG | - | tig0024837:40075-40094 | None:intergenic | 30.0% | |
| AAATATAAACCAGTGGAATG+AGG | - | tig0024837:40104-40123 | None:intergenic | 30.0% | |
| TCCAATCTATAAGAACAAAG+GGG | + | tig0024837:40217-40236 | Msa1420700:intron | 30.0% | |
| !!! | AGTTTTCATTGATTTGGAGA+AGG | + | tig0024837:40448-40467 | Msa1420700:intron | 30.0% |
| ! | GTAGATTTTCCCATAACAAT+AGG | + | tig0024837:40605-40624 | Msa1420700:intron | 30.0% |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | + | tig0024837:40667-40686 | Msa1420700:intron | 30.0% |
| TATTTAAACCGTGTAACTTG+GGG | - | tig0024837:40913-40932 | None:intergenic | 30.0% | |
| GATATTTAAACCGTGTAACT+TGG | - | tig0024837:40915-40934 | None:intergenic | 30.0% | |
| GTTACACGGTTTAAATATCT+TGG | + | tig0024837:40916-40935 | Msa1420700:intron | 30.0% | |
| TATTCAAACTGTGGTTGAAA+TGG | + | tig0024837:40987-41006 | Msa1420700:intron | 30.0% | |
| ! | AAAGTACCACTTAAGCTAAA+AGG | + | tig0024837:41040-41059 | Msa1420700:intron | 30.0% |
| !!! | AACTTTCCTTTTAGCTTAAG+TGG | - | tig0024837:41049-41068 | None:intergenic | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | tig0024837:41235-41254 | None:intergenic | 30.0% |
| TTGATCTACTCTTCTTACAA+CGG | - | tig0024837:41305-41324 | None:intergenic | 30.0% | |
| TGTAAGAAGAGTAGATCAAA+TGG | + | tig0024837:41306-41325 | Msa1420700:intron | 30.0% | |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | tig0024837:41386-41405 | None:intergenic | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | + | tig0024837:41425-41444 | Msa1420700:intron | 30.0% |
| TAAGGAGTCATGTATGATTA+TGG | + | tig0024837:41617-41636 | Msa1420700:intron | 30.0% | |
| CATTTGGACATATATTGAGT+AGG | + | tig0024837:41984-42003 | Msa1420700:intron | 30.0% | |
| !!! | ATTTTTTTGTTCGCACATTG+TGG | + | tig0024837:42063-42082 | Msa1420700:intron | 30.0% |
| TACTGTTATGCAATTGATTG+TGG | + | tig0024837:42090-42109 | Msa1420700:intron | 30.0% | |
| TTATCCATCAATTAAGCAAC+AGG | + | tig0024837:42272-42291 | Msa1420700:intron | 30.0% | |
| TATCCATCAATTAAGCAACA+GGG | + | tig0024837:42273-42292 | Msa1420700:intron | 30.0% | |
| !! | TTCAACCATGTATTTGCTAT+TGG | + | tig0024837:42345-42364 | Msa1420700:intron | 30.0% |
| AATAGCCAATAGCAAATACA+TGG | - | tig0024837:42353-42372 | None:intergenic | 30.0% | |
| AATTGAATTCCTGAGTCAAT+AGG | - | tig0024837:42460-42479 | None:intergenic | 30.0% | |
| ! | TTCCATCTTTTCTTCACAAT+CGG | - | tig0024837:42744-42763 | None:intergenic | 30.0% |
| TGAAGAAAAGATGGAAGATA+TGG | + | tig0024837:42748-42767 | Msa1420700:intron | 30.0% | |
| ATGCACAAAAGAAAATAAGG+AGG | - | tig0024837:42810-42829 | None:intergenic | 30.0% | |
| CACATGCACAAAAGAAAATA+AGG | - | tig0024837:42813-42832 | None:intergenic | 30.0% | |
| CAACAATAGTCACTAAAAAC+TGG | - | tig0024837:42854-42873 | None:intergenic | 30.0% | |
| TATACAGTTTAAGAAGCAAC+AGG | - | tig0024837:42889-42908 | None:intergenic | 30.0% | |
| AGAGATACAAAAGCAAAATG+CGG | - | tig0024837:43200-43219 | None:intergenic | 30.0% | |
| TCTTCAATTATCTGCTTAGG+CGG | - | tig0024837:37696-37715 | None:intergenic | 35.0% | |
| CGTTGAATCAGTTGTTAAAG+TGG | - | tig0024837:37807-37826 | None:intergenic | 35.0% | |
| AAAGAATGGAAATGCAGTGA+TGG | + | tig0024837:38062-38081 | Msa1420700:intron | 35.0% | |
| CATCTGAATTAGCTAAGAAG+AGG | + | tig0024837:38253-38272 | Msa1420700:CDS | 35.0% | |
| ACAGTACAAACAGTTCAAAG+AGG | + | tig0024837:38278-38297 | Msa1420700:CDS | 35.0% | |
| TTTAATCGTGAGTTGTTGGT+AGG | + | tig0024837:38397-38416 | Msa1420700:intron | 35.0% | |
| ACATCATCTCCAATCTCTAT+TGG | + | tig0024837:38459-38478 | Msa1420700:intron | 35.0% | |
| TGGTTCTTACATCAAACTAC+TGG | + | tig0024837:38479-38498 | Msa1420700:intron | 35.0% | |
| ! | TTACATCAAACTACTGGCTA+GGG | + | tig0024837:38485-38504 | Msa1420700:intron | 35.0% |
| AAGTCAACAAAGATTGCACT+TGG | - | tig0024837:38609-38628 | None:intergenic | 35.0% | |
| ! | AAGTGCAATCTTTGTTGACT+TGG | + | tig0024837:38608-38627 | Msa1420700:intron | 35.0% |
| AATTTCTGATCTAGAGAGCA+AGG | - | tig0024837:38772-38791 | None:intergenic | 35.0% | |
| AGATTCATTTGCATAGTACC+TGG | - | tig0024837:38851-38870 | None:intergenic | 35.0% | |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | tig0024837:39208-39227 | Msa1420700:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | tig0024837:39212-39231 | Msa1420700:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | tig0024837:39311-39330 | Msa1420700:intron | 35.0% |
| TCATTGCATTCTGTAGGATA+CGG | + | tig0024837:39384-39403 | Msa1420700:intron | 35.0% | |
| CCAGAGAAAAAATGCATATC+AGG | - | tig0024837:39451-39470 | None:intergenic | 35.0% | |
| !!! | CCTGATATGCATTTTTTCTC+TGG | + | tig0024837:39448-39467 | Msa1420700:intron | 35.0% |
| ! | CTTTTCCAGCATGAACTTAT+TGG | + | tig0024837:39550-39569 | Msa1420700:intron | 35.0% |
| !! | TTTTTGCTGACATTTTCAGG+AGG | + | tig0024837:39580-39599 | Msa1420700:intron | 35.0% |
| AAGGGGTTAACAAAACATCA+GGG | - | tig0024837:39812-39831 | None:intergenic | 35.0% | |
| AAAGGGGTTAACAAAACATC+AGG | - | tig0024837:39813-39832 | None:intergenic | 35.0% | |
| TATGGTGCTTCTGATTATCA+CGG | - | tig0024837:40026-40045 | None:intergenic | 35.0% | |
| TGAAATTCTATGCGTGGAAA+AGG | - | tig0024837:40069-40088 | None:intergenic | 35.0% | |
| CACTTGGAAATATAAACCAG+TGG | - | tig0024837:40111-40130 | None:intergenic | 35.0% | |
| AATTAAAGGGGAAGCCATAA+TGG | + | tig0024837:40139-40158 | Msa1420700:intron | 35.0% | |
| ATTAAAGGGGAAGCCATAAT+GGG | + | tig0024837:40140-40159 | Msa1420700:intron | 35.0% | |
| TCCCCTTTGTTCTTATAGAT+TGG | - | tig0024837:40221-40240 | None:intergenic | 35.0% | |
| TACAACATTGCGCGAATTAT+AGG | + | tig0024837:40243-40262 | Msa1420700:intron | 35.0% | |
| ACAACATTGCGCGAATTATA+GGG | + | tig0024837:40244-40263 | Msa1420700:intron | 35.0% | |
| TGAGTCATACCATGAAGTTA+TGG | + | tig0024837:40279-40298 | Msa1420700:intron | 35.0% | |
| GAGTCATACCATGAAGTTAT+GGG | + | tig0024837:40280-40299 | Msa1420700:intron | 35.0% | |
| ATACCATGAAGTTATGGGAA+AGG | + | tig0024837:40285-40304 | Msa1420700:intron | 35.0% | |
| TACCATGAAGTTATGGGAAA+GGG | + | tig0024837:40286-40305 | Msa1420700:intron | 35.0% | |
| TTACGTACGGATAACCAATT+TGG | + | tig0024837:40342-40361 | Msa1420700:intron | 35.0% | |
| !! | ATCCTGGATAGCTCTAATAT+AGG | - | tig0024837:40537-40556 | None:intergenic | 35.0% |
| ATATTAGAGCTATCCAGGAT+AGG | + | tig0024837:40537-40556 | Msa1420700:intron | 35.0% | |
| TACATCTTTGTGCTAACTCT+TGG | - | tig0024837:40700-40719 | None:intergenic | 35.0% | |
| ! | TTTTGCAGATGATGTAGTCT+TGG | + | tig0024837:40724-40743 | Msa1420700:intron | 35.0% |
| TGGAATGTAACTTCAGCAAA+AGG | + | tig0024837:40842-40861 | Msa1420700:intron | 35.0% | |
| ATTTAAACCGTGTAACTTGG+GGG | - | tig0024837:40912-40931 | None:intergenic | 35.0% | |
| !! | TTCTCCGTCATTTTGTACTA+TGG | - | tig0024837:40944-40963 | None:intergenic | 35.0% |
| ACATCATCGTATTCAAACTG+TGG | + | tig0024837:40978-40997 | Msa1420700:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | tig0024837:41228-41247 | Msa1420700:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | tig0024837:41248-41267 | Msa1420700:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | tig0024837:41253-41272 | Msa1420700:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | tig0024837:41309-41328 | Msa1420700:intron | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | tig0024837:41393-41412 | Msa1420700:intron | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | tig0024837:41405-41424 | Msa1420700:intron | 35.0% |
| TATAAAGGTAGCATTGCTCA+CGG | + | tig0024837:41520-41539 | Msa1420700:intron | 35.0% | |
| AAGGCCTGCATATTGTAATA+GGG | - | tig0024837:41690-41709 | None:intergenic | 35.0% | |
| AAAGGCCTGCATATTGTAAT+AGG | - | tig0024837:41691-41710 | None:intergenic | 35.0% | |
| !! | TGTTTTGTTGAGCTATTGAG+TGG | + | tig0024837:41732-41751 | Msa1420700:CDS | 35.0% |
| !! | GTTTTGTTGAGCTATTGAGT+GGG | + | tig0024837:41733-41752 | Msa1420700:CDS | 35.0% |
| ACAACTAGACAATAGTGTTG+TGG | + | tig0024837:41776-41795 | Msa1420700:CDS | 35.0% | |
| CAACTAGACAATAGTGTTGT+GGG | + | tig0024837:41777-41796 | Msa1420700:CDS | 35.0% | |
| GAAAACATGATGAAGAGTTG+TGG | + | tig0024837:41838-41857 | Msa1420700:CDS | 35.0% | |
| TATCATCAAAGCAATGAAGC+AGG | - | tig0024837:42188-42207 | None:intergenic | 35.0% | |
| CCACCTAAATGCATAGAATT+GGG | - | tig0024837:42429-42448 | None:intergenic | 35.0% | |
| TCCACCTAAATGCATAGAAT+TGG | - | tig0024837:42430-42449 | None:intergenic | 35.0% | |
| !! | AAAGAGTGTCCCAAATATGA+AGG | - | tig0024837:42493-42512 | None:intergenic | 35.0% |
| !! | CATATTTGGGACACTCTTTT+AGG | + | tig0024837:42494-42513 | Msa1420700:CDS | 35.0% |
| AATGGCTCATGTTTCTTTGA+TGG | + | tig0024837:42593-42612 | Msa1420700:intron | 35.0% | |
| ! | TAGTGTCAATTTGCTCATAC+TGG | + | tig0024837:42658-42677 | Msa1420700:intron | 35.0% |
| CTACTCTTATTCCACTTTAG+AGG | + | tig0024837:42715-42734 | Msa1420700:intron | 35.0% | |
| ! | TCCATCTTTTCTTCACAATC+GGG | - | tig0024837:42743-42762 | None:intergenic | 35.0% |
| GGAAGATATGGCCATATTAT+CGG | + | tig0024837:42760-42779 | Msa1420700:intron | 35.0% | |
| GAAGATATGGCCATATTATC+GGG | + | tig0024837:42761-42780 | Msa1420700:intron | 35.0% | |
| GTTCTAATGTCCCGATAATA+TGG | - | tig0024837:42774-42793 | None:intergenic | 35.0% | |
| ATCGGGAAGTTAATGAGTTT+GGG | + | tig0024837:42934-42953 | Msa1420700:intron | 35.0% | |
| AAATGGCTAATGTTTGTGGA+CGG | - | tig0024837:43124-43143 | None:intergenic | 35.0% | |
| TATTGGCAACATAGAGCAAA+TGG | - | tig0024837:43141-43160 | None:intergenic | 35.0% | |
| TGACTGTACACGAAACTTAT+TGG | - | tig0024837:43158-43177 | None:intergenic | 35.0% | |
| AGATACAAAAGCAAAATGCG+GGG | - | tig0024837:43198-43217 | None:intergenic | 35.0% | |
| GAGATACAAAAGCAAAATGC+GGG | - | tig0024837:43199-43218 | None:intergenic | 35.0% | |
| TGAAGAAGAAAGTTCCCGAT+TGG | + | tig0024837:37517-37536 | Msa1420700:CDS | 40.0% | |
| CCTCAGTCAATAATTGAGCA+TGG | - | tig0024837:37779-37798 | None:intergenic | 40.0% | |
| ! | CCATGCTCAATTATTGACTG+AGG | + | tig0024837:37776-37795 | Msa1420700:CDS | 40.0% |
| ! | TTTGGTTCAGTTGTCGAAGA+AGG | + | tig0024837:37882-37901 | Msa1420700:intron | 40.0% |
| GATACGTTCTACATTGTGGA+AGG | + | tig0024837:37963-37982 | Msa1420700:CDS | 40.0% | |
| !! | TTGTTTTTCGCGGCAAAGAA+TGG | + | tig0024837:38048-38067 | Msa1420700:intron | 40.0% |
| ! | TGATGTTTGCAGCTTTTGCT+TGG | + | tig0024837:38201-38220 | Msa1420700:intron | 40.0% |
| TTTGCTTGGATATCTTCCAC+CGG | + | tig0024837:38215-38234 | Msa1420700:CDS | 40.0% | |
| ATCCTGTAAGTCAACTGCTT+AGG | + | tig0024837:38313-38332 | Msa1420700:intron | 40.0% | |
| ! | TTCCTAAGCAGTTGACTTAC+AGG | - | tig0024837:38318-38337 | None:intergenic | 40.0% |
| TATCATCTCAGATTATGGGG+TGG | + | tig0024837:38354-38373 | Msa1420700:intron | 40.0% | |
| ! | CTTACATCAAACTACTGGCT+AGG | + | tig0024837:38484-38503 | Msa1420700:intron | 40.0% |
| ! | TACATCAAACTACTGGCTAG+GGG | + | tig0024837:38486-38505 | Msa1420700:intron | 40.0% |
| GGGGAAGAGAGATAATTCTA+AGG | + | tig0024837:38505-38524 | Msa1420700:intron | 40.0% | |
| CTAGCTAGTCAGAAATCACA+AGG | + | tig0024837:38691-38710 | Msa1420700:intron | 40.0% | |
| AGGATGTACAACTCCACTAT+TGG | + | tig0024837:38714-38733 | Msa1420700:CDS | 40.0% | |
| ATCATCAGCATCACCAATAG+TGG | - | tig0024837:38730-38749 | None:intergenic | 40.0% | |
| ATGAGCATCCTTTGAGTCTT+GGG | + | tig0024837:38799-38818 | Msa1420700:CDS | 40.0% | |
| ! | GAAGAACTGATTCCATACAC+TGG | - | tig0024837:38829-38848 | None:intergenic | 40.0% |
| TGTATGGAATCAGTTCTTCC+AGG | + | tig0024837:38830-38849 | Msa1420700:CDS | 40.0% | |
| ATGAAGTCACTGATCATGCA+TGG | + | tig0024837:38900-38919 | Msa1420700:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | tig0024837:39315-39334 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | tig0024837:39211-39230 | Msa1420700:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | tig0024837:39315-39334 | Msa1420700:intron | 40.0% |
| GTATCCTACAGAATGCAATG+AGG | - | tig0024837:39385-39404 | None:intergenic | 40.0% | |
| CAGGAGTAAAGTATGTCCAA+GGG | + | tig0024837:39642-39661 | Msa1420700:CDS | 40.0% | |
| CCAATAACTCATTCATCCCT+TGG | - | tig0024837:39661-39680 | None:intergenic | 40.0% | |
| CCAAGGGATGAATGAGTTAT+TGG | + | tig0024837:39658-39677 | Msa1420700:CDS | 40.0% | |
| ! | TCACTGCATTTTCTTCGTCT+GGG | - | tig0024837:39712-39731 | None:intergenic | 40.0% |
| AATGTAAAGGAGACTACAGG+TGG | - | tig0024837:39883-39902 | None:intergenic | 40.0% | |
| ATGGTGCTTCTGATTATCAC+GGG | - | tig0024837:40025-40044 | None:intergenic | 40.0% | |
| TTTCTGTTTCCTCATTCCAC+TGG | + | tig0024837:40092-40111 | Msa1420700:intron | 40.0% | |
| TTAAAGGGGAAGCCATAATG+GGG | + | tig0024837:40141-40160 | Msa1420700:intron | 40.0% | |
| CAACATTGCGCGAATTATAG+GGG | + | tig0024837:40245-40264 | Msa1420700:intron | 40.0% | |
| AAAGAGACTCACGTTACGTA+CGG | + | tig0024837:40329-40348 | Msa1420700:intron | 40.0% | |
| !!! | AACCAATTTGGTTTTGTGCC+TGG | + | tig0024837:40354-40373 | Msa1420700:intron | 40.0% |
| !!! | ACCAATTTGGTTTTGTGCCT+GGG | + | tig0024837:40355-40374 | Msa1420700:intron | 40.0% |
| ! | GAGTACCTAGAGAGATTTTG+TGG | + | tig0024837:40480-40499 | Msa1420700:intron | 40.0% |
| GCTTTCCACAAAATCTCTCT+AGG | - | tig0024837:40488-40507 | None:intergenic | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | + | tig0024837:40532-40551 | Msa1420700:intron | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | - | tig0024837:40617-40636 | None:intergenic | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | - | tig0024837:40618-40637 | None:intergenic | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | + | tig0024837:40617-40636 | Msa1420700:intron | 40.0% | |
| TAACAATAGGACTGCACCAA+GGG | + | tig0024837:40618-40637 | Msa1420700:intron | 40.0% | |
| TAGAAGCAAGACGGAGTATA+TGG | + | tig0024837:40822-40841 | Msa1420700:intron | 40.0% | |
| AACTTCAGCAAAAGGAGAAG+TGG | + | tig0024837:40850-40869 | Msa1420700:intron | 40.0% | |
| ACTTCAGCAAAAGGAGAAGT+GGG | + | tig0024837:40851-40870 | Msa1420700:intron | 40.0% | |
| ATATCATCCCCCAAGTTACA+CGG | + | tig0024837:40902-40921 | Msa1420700:intron | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | + | tig0024837:40937-40956 | Msa1420700:intron | 40.0% | |
| CACTTACTTTACTCTCGTGT+TGG | - | tig0024837:41121-41140 | None:intergenic | 40.0% | |
| CGAGAGTAAAGTAAGTGTAG+CGG | + | tig0024837:41124-41143 | Msa1420700:intron | 40.0% | |
| AGACTAGACAGGATAGGATT+AGG | + | tig0024837:41177-41196 | Msa1420700:intron | 40.0% | |
| TCTTCTTACAACGGCATCTA+CGG | - | tig0024837:41296-41315 | None:intergenic | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | tig0024837:41334-41353 | Msa1420700:intron | 40.0% | |
| ATAAAGGTAGCATTGCTCAC+GGG | + | tig0024837:41521-41540 | Msa1420700:intron | 40.0% | |
| ! | CTTGCTGTGATGTATGATCA+CGG | + | tig0024837:41560-41579 | Msa1420700:intron | 40.0% |
| TTGCTGTGATGTATGATCAC+GGG | + | tig0024837:41561-41580 | Msa1420700:intron | 40.0% | |
| AGCTCCCTATTACAATATGC+AGG | + | tig0024837:41683-41702 | Msa1420700:intron | 40.0% | |
| CATCAATTAAGCAACAGGGA+GGG | + | tig0024837:42277-42296 | Msa1420700:intron | 40.0% | |
| ATCAATTAAGCAACAGGGAG+GGG | + | tig0024837:42278-42297 | Msa1420700:intron | 40.0% | |
| CCCAATTCTATGCATTTAGG+TGG | + | tig0024837:42426-42445 | Msa1420700:CDS | 40.0% | |
| TTGCTGACAGCCTTCATATT+TGG | + | tig0024837:42480-42499 | Msa1420700:CDS | 40.0% | |
| TGCTGACAGCCTTCATATTT+GGG | + | tig0024837:42481-42500 | Msa1420700:CDS | 40.0% | |
| GGCATGTAGCATTTCAGTAA+TGG | + | tig0024837:42575-42594 | Msa1420700:intron | 40.0% | |
| TCCCGATTGTGAAGAAAAGA+TGG | + | tig0024837:42739-42758 | Msa1420700:intron | 40.0% | |
| CTGTATATAGAACTGGTGAG+TGG | + | tig0024837:42902-42921 | Msa1420700:intron | 40.0% | |
| GATCGGGAAGTTAATGAGTT+TGG | + | tig0024837:42933-42952 | Msa1420700:intron | 40.0% | |
| AAACTGACACAATGTTCTGC+AGG | + | tig0024837:43000-43019 | Msa1420700:intron | 40.0% | |
| AATGGCTAATGTTTGTGGAC+GGG | - | tig0024837:43123-43142 | None:intergenic | 40.0% | |
| GAGCAAATGGCTAATGTTTG+TGG | - | tig0024837:43128-43147 | None:intergenic | 40.0% | |
| TTTCGTGTACAGTCAGTCTA+AGG | + | tig0024837:43163-43182 | Msa1420700:CDS | 40.0% | |
| TTCGTGTACAGTCAGTCTAA+GGG | + | tig0024837:43164-43183 | Msa1420700:CDS | 40.0% | |
| AGAGAGCTGTTAAGCCAATC+GGG | - | tig0024837:37534-37553 | None:intergenic | 45.0% | |
| GAGAGAGCTGTTAAGCCAAT+CGG | - | tig0024837:37535-37554 | None:intergenic | 45.0% | |
| ! | ATTGGCTTAACAGCTCTCTC+TGG | + | tig0024837:37535-37554 | Msa1420700:CDS | 45.0% |
| GGAGGATCTTGAACTACGAT+GGG | - | tig0024837:37675-37694 | None:intergenic | 45.0% | |
| TCAATTATCTGCTTAGGCGG+AGG | - | tig0024837:37693-37712 | None:intergenic | 45.0% | |
| TCAGTTGTCGAAGAAGGTGA+TGG | + | tig0024837:37888-37907 | Msa1420700:intron | 45.0% | |
| !! | CGAAGAAGGTGATGGATATG+CGG | + | tig0024837:37896-37915 | Msa1420700:CDS | 45.0% |
| !! | GAAGAAGGTGATGGATATGC+GGG | + | tig0024837:37897-37916 | Msa1420700:CDS | 45.0% |
| ! | TGATGGATATGCGGGAATTG+AGG | + | tig0024837:37905-37924 | Msa1420700:CDS | 45.0% |
| TTGAGGAGGATCTCATGTCA+AGG | + | tig0024837:37922-37941 | Msa1420700:CDS | 45.0% | |
| CTGGGATACGTTCTACATTG+TGG | + | tig0024837:37959-37978 | Msa1420700:CDS | 45.0% | |
| ATCTCAGATTATGGGGTGGA+GGG | + | tig0024837:38358-38377 | Msa1420700:intron | 45.0% | |
| GCTAGTCAGAAATCACAAGG+AGG | + | tig0024837:38694-38713 | Msa1420700:intron | 45.0% | |
| CTCAAAGGATGCTCATCATG+AGG | - | tig0024837:38795-38814 | None:intergenic | 45.0% | |
| GATGAGCATCCTTTGAGTCT+TGG | + | tig0024837:38798-38817 | Msa1420700:CDS | 45.0% | |
| AACGGAGGGAGTAGTACATT+AGG | - | tig0024837:39059-39078 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | tig0024837:39314-39333 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | tig0024837:39314-39333 | Msa1420700:intron | 45.0% |
| ! | ACGGAGGGAGTATAATGCTT+TGG | + | tig0024837:39330-39349 | Msa1420700:intron | 45.0% |
| CGATCCTCATTGCATTCTGT+AGG | + | tig0024837:39378-39397 | Msa1420700:intron | 45.0% | |
| GATGAGTGCGCTTTACATCT+CGG | - | tig0024837:39429-39448 | None:intergenic | 45.0% | |
| CCTTGGACATACTTTACTCC+TGG | - | tig0024837:39644-39663 | None:intergenic | 45.0% | |
| CCAGGAGTAAAGTATGTCCA+AGG | + | tig0024837:39641-39660 | Msa1420700:CDS | 45.0% | |
| ! | CTCACTGCATTTTCTTCGTC+TGG | - | tig0024837:39713-39732 | None:intergenic | 45.0% |
| TAAAGGGGAAGCCATAATGG+GGG | + | tig0024837:40142-40161 | Msa1420700:intron | 45.0% | |
| TGTCATCTCTACCCCCATTA+TGG | - | tig0024837:40156-40175 | None:intergenic | 45.0% | |
| CACCCTTTCCCATAACTTCA+TGG | - | tig0024837:40291-40310 | None:intergenic | 45.0% | |
| TCCCAGGCACAAAACCAAAT+TGG | - | tig0024837:40359-40378 | None:intergenic | 45.0% | |
| !!! | AATTTGGTTTTGTGCCTGGG+AGG | + | tig0024837:40358-40377 | Msa1420700:intron | 45.0% |
| CTACTTACTTTGACGCGTGA+TGG | + | tig0024837:40398-40417 | Msa1420700:intron | 45.0% | |
| ! | AGAGATTTTGTGGAAAGCCC+TGG | + | tig0024837:40490-40509 | Msa1420700:intron | 45.0% |
| AGCTATCCAGGATAGGTATG+AGG | + | tig0024837:40544-40563 | Msa1420700:intron | 45.0% | |
| GCTATCCAGGATAGGTATGA+GGG | + | tig0024837:40545-40564 | Msa1420700:intron | 45.0% | |
| ! | ATGTAGTCTTGGTGAGTCGA+GGG | + | tig0024837:40735-40754 | Msa1420700:intron | 45.0% |
| AGTCGAGGGAGGAGTTAAAT+GGG | + | tig0024837:40749-40768 | Msa1420700:intron | 45.0% | |
| TCTACCTTGGAGGTGAAAGT+TGG | + | tig0024837:40874-40893 | Msa1420700:intron | 45.0% | |
| GTGTAACTTGGGGGATGATA+TGG | - | tig0024837:40903-40922 | None:intergenic | 45.0% | |
| TTGAAATGGAGAACAGCCTC+AGG | + | tig0024837:41001-41020 | Msa1420700:intron | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | - | tig0024837:41020-41039 | None:intergenic | 45.0% | |
| TCAGACAACAACAGTCAGAC+CGG | + | tig0024837:41072-41091 | Msa1420700:intron | 45.0% | |
| ! | AAGTAAGTGTAGCGGAGATG+AGG | + | tig0024837:41132-41151 | Msa1420700:intron | 45.0% |
| !! | AGGATGTTGTGATGGATGAG+TGG | + | tig0024837:41152-41171 | Msa1420700:intron | 45.0% |
| GATGAGTGGTAAGACTAGAC+AGG | + | tig0024837:41166-41185 | Msa1420700:intron | 45.0% | |
| GTGGTAAGACTAGACAGGAT+AGG | + | tig0024837:41171-41190 | Msa1420700:intron | 45.0% | |
| TGACACCATTAGAGAGAGAG+TGG | + | tig0024837:41202-41221 | Msa1420700:intron | 45.0% | |
| GACACCATTAGAGAGAGAGT+GGG | + | tig0024837:41203-41222 | Msa1420700:intron | 45.0% | |
| ACACCATTAGAGAGAGAGTG+GGG | + | tig0024837:41204-41223 | Msa1420700:intron | 45.0% | |
| CTTCTTACAACGGCATCTAC+GGG | - | tig0024837:41295-41314 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | tig0024837:41318-41337 | Msa1420700:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | tig0024837:41328-41347 | Msa1420700:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | tig0024837:41474-41493 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | tig0024837:41475-41494 | None:intergenic | 45.0% |
| TGTGATGTATGATCACGGGA+AGG | + | tig0024837:41565-41584 | Msa1420700:intron | 45.0% | |
| GTGATGTATGATCACGGGAA+GGG | + | tig0024837:41566-41585 | Msa1420700:intron | 45.0% | |
| ! | CCTCCCTGTTGCTTAATTGA+TGG | - | tig0024837:42279-42298 | None:intergenic | 45.0% |
| CCATCAATTAAGCAACAGGG+AGG | + | tig0024837:42276-42295 | Msa1420700:intron | 45.0% | |
| TCAATTAAGCAACAGGGAGG+GGG | + | tig0024837:42279-42298 | Msa1420700:intron | 45.0% | |
| !! | GATCACTCTCCTATTGACTC+AGG | + | tig0024837:42448-42467 | Msa1420700:CDS | 45.0% |
| !! | ACTCTTTTAGGTGACCCAGA+GGG | + | tig0024837:42506-42525 | Msa1420700:CDS | 45.0% |
| TCGGAACAAGATTGTACCTG+TGG | - | tig0024837:42533-42552 | None:intergenic | 45.0% | |
| ! | ACAATCGGGATCCTCTAAAG+TGG | - | tig0024837:42729-42748 | None:intergenic | 45.0% |
| ATAGAACTGGTGAGTGGTGA+TGG | + | tig0024837:42908-42927 | Msa1420700:intron | 45.0% | |
| TTAGCATTGCACAACACACC+CGG | - | tig0024837:43036-43055 | None:intergenic | 45.0% | |
| TTGAAGTGAAATCACCCGCT+AGG | - | tig0024837:43078-43097 | None:intergenic | 45.0% | |
| !! | ATATAATTAATTAAATGTAA+AGG | - | tig0024837:39896-39915 | None:intergenic | 5.0% |
| AGGTGAAATTGGGCTGTGGA+CGG | - | tig0024837:37634-37653 | None:intergenic | 50.0% | |
| GAGGTTGGGGAGGTGAAATT+GGG | - | tig0024837:37644-37663 | None:intergenic | 50.0% | |
| TGAACTACGATGGGAGGAGA+CGG | - | tig0024837:37666-37685 | None:intergenic | 50.0% | |
| GGATCTTGAACTACGATGGG+AGG | - | tig0024837:37672-37691 | None:intergenic | 50.0% | |
| CGGAGGATCTTGAACTACGA+TGG | - | tig0024837:37676-37695 | None:intergenic | 50.0% | |
| ATCGTGGTCATGGTGATCGT+CGG | - | tig0024837:37727-37746 | None:intergenic | 50.0% | |
| ATGGTGAGAGACGTCGTAAG+CGG | - | tig0024837:37760-37779 | None:intergenic | 50.0% | |
| TGGATATGCGGGAATTGAGG+AGG | + | tig0024837:37908-37927 | Msa1420700:CDS | 50.0% | |
| AAGGTGTGCCTGATTCTGCT+GGG | + | tig0024837:37941-37960 | Msa1420700:CDS | 50.0% | |
| GAACGTATCCCAGCAGAATC+AGG | - | tig0024837:37952-37971 | None:intergenic | 50.0% | |
| CATCTCAGATTATGGGGTGG+AGG | + | tig0024837:38357-38376 | Msa1420700:intron | 50.0% | |
| TCTCAGATTATGGGGTGGAG+GGG | + | tig0024837:38359-38378 | Msa1420700:intron | 50.0% | |
| ! | CTGGTCTTCCCAAGACTCAA+AGG | - | tig0024837:38810-38829 | None:intergenic | 50.0% |
| GTCTTGGGAAGACCAGTGTA+TGG | + | tig0024837:38814-38833 | Msa1420700:CDS | 50.0% | |
| ! | CAGGTGGACTTAGCAAAGCA+TGG | - | tig0024837:39867-39886 | None:intergenic | 50.0% |
| ! | TTTTGTGGAAAGCCCTGGAG+AGG | + | tig0024837:40495-40514 | Msa1420700:intron | 50.0% |
| GAAAGCCCTGGAGAGGAAAA+GGG | + | tig0024837:40502-40521 | Msa1420700:intron | 50.0% | |
| AAGCTCCCTCATACCTATCC+TGG | - | tig0024837:40553-40572 | None:intergenic | 50.0% | |
| ACTAGTGTGAGGACGCAAGA+TGG | + | tig0024837:40575-40594 | Msa1420700:intron | 50.0% | |
| CTAGTGTGAGGACGCAAGAT+GGG | + | tig0024837:40576-40595 | Msa1420700:intron | 50.0% | |
| TAGTGTGAGGACGCAAGATG+GGG | + | tig0024837:40577-40596 | Msa1420700:intron | 50.0% | |
| AAGGACTTAGGGTTGACCCT+TGG | - | tig0024837:40637-40656 | None:intergenic | 50.0% | |
| ! | GATGTAGTCTTGGTGAGTCG+AGG | + | tig0024837:40734-40753 | Msa1420700:intron | 50.0% |
| GAGTCGAGGGAGGAGTTAAA+TGG | + | tig0024837:40748-40767 | Msa1420700:intron | 50.0% | |
| TAAATGGGAGGCTAGAGACC+TGG | + | tig0024837:40764-40783 | Msa1420700:intron | 50.0% | |
| ! | AGGCAAGCCTTAGAAGCGTA+TGG | + | tig0024837:40787-40806 | Msa1420700:intron | 50.0% |
| GCAGAAGCCATACGCTTCTA+AGG | - | tig0024837:40797-40816 | None:intergenic | 50.0% | |
| CTGCCTGAGTAGAAGCAAGA+CGG | + | tig0024837:40813-40832 | Msa1420700:intron | 50.0% | |
| ACTCCGTCTTGCTTCTACTC+AGG | - | tig0024837:40819-40838 | None:intergenic | 50.0% | |
| AAGGAGAAGTGGGTCTACCT+TGG | + | tig0024837:40861-40880 | Msa1420700:intron | 50.0% | |
| GTCTCCAACTTTCACCTCCA+AGG | - | tig0024837:40881-40900 | None:intergenic | 50.0% | |
| ACAACAACAGTCAGACCGGA+CGG | + | tig0024837:41076-41095 | Msa1420700:intron | 50.0% | |
| CGGAGATGAGGATGTTGTGA+TGG | + | tig0024837:41144-41163 | Msa1420700:intron | 50.0% | |
| CTACCCCACTCTCTCTCTAA+TGG | - | tig0024837:41210-41229 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | tig0024837:41470-41489 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | tig0024837:41476-41495 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | tig0024837:41473-41492 | Msa1420700:intron | 50.0% | |
| GAACGCATCAGCTTCAGCAA+AGG | - | tig0024837:41709-41728 | None:intergenic | 50.0% | |
| !! | CACTCTTTTAGGTGACCCAG+AGG | + | tig0024837:42505-42524 | Msa1420700:CDS | 50.0% |
| ATTGTACCTGTGGACCCTCT+GGG | - | tig0024837:42523-42542 | None:intergenic | 50.0% | |
| !! | GGTGAGTGGTGATGGTAGAT+CGG | + | tig0024837:42916-42935 | Msa1420700:intron | 50.0% |
| !! | GTGAGTGGTGATGGTAGATC+GGG | + | tig0024837:42917-42936 | Msa1420700:intron | 50.0% |
| TTCTGCAGGAGACTCTTCTC+CGG | + | tig0024837:43014-43033 | Msa1420700:intron | 50.0% | |
| AAGTGAAATCACCCGCTAGG+AGG | - | tig0024837:43075-43094 | None:intergenic | 50.0% | |
| ! | AGAGGATTCTTCGGTGGTGG+TGG | - | tig0024837:37610-37629 | None:intergenic | 55.0% |
| GTGGACGGGAGAGGATTCTT+CGG | - | tig0024837:37619-37638 | None:intergenic | 55.0% | |
| GGTGAAATTGGGCTGTGGAC+GGG | - | tig0024837:37633-37652 | None:intergenic | 55.0% | |
| GGAGGTTGGGGAGGTGAAAT+TGG | - | tig0024837:37645-37664 | None:intergenic | 55.0% | |
| ! | AAGGAGGCACATCGTGGTCA+TGG | - | tig0024837:37737-37756 | None:intergenic | 55.0% |
| TGAGAGACGTCGTAAGCGGA+AGG | - | tig0024837:37756-37775 | None:intergenic | 55.0% | |
| CAAGGTGTGCCTGATTCTGC+TGG | + | tig0024837:37940-37959 | Msa1420700:CDS | 55.0% | |
| ! | GATGACCAAAGCGCTCGATC+CGG | - | tig0024837:38237-38256 | None:intergenic | 55.0% |
| ATGATGCCGCCAAACGTGAC+AGG | + | tig0024837:38745-38764 | Msa1420700:CDS | 55.0% | |
| TGATGCCGCCAAACGTGACA+GGG | + | tig0024837:38746-38765 | Msa1420700:CDS | 55.0% | |
| ! | TTTGACGCGTGATGGAGCGA+CGG | + | tig0024837:40406-40425 | Msa1420700:intron | 55.0% |
| GGAAAGCCCTGGAGAGGAAA+AGG | + | tig0024837:40501-40520 | Msa1420700:intron | 55.0% | |
| ! | CCTCACCCTTTTCCTCTCCA+GGG | - | tig0024837:40510-40529 | None:intergenic | 55.0% |
| ! | TCCTCACCCTTTTCCTCTCC+AGG | - | tig0024837:40511-40530 | None:intergenic | 55.0% |
| AGGGAGCTTCGACTAGTGTG+AGG | + | tig0024837:40564-40583 | Msa1420700:intron | 55.0% | |
| ! | TAGTCTTGGTGAGTCGAGGG+AGG | + | tig0024837:40738-40757 | Msa1420700:intron | 55.0% |
| CGAGGGAGGAGTTAAATGGG+AGG | + | tig0024837:40752-40771 | Msa1420700:intron | 55.0% | |
| GAGAAGTGGGTCTACCTTGG+AGG | + | tig0024837:40864-40883 | Msa1420700:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | tig0024837:41462-41481 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | tig0024837:41461-41480 | Msa1420700:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | tig0024837:41462-41481 | Msa1420700:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | tig0024837:41468-41487 | Msa1420700:intron | 55.0% | |
| GATTGTACCTGTGGACCCTC+TGG | - | tig0024837:42524-42543 | None:intergenic | 55.0% | |
| TCTGCAGGAGACTCTTCTCC+GGG | + | tig0024837:43015-43034 | Msa1420700:intron | 55.0% | |
| !! | TTCTTCGGTGGTGGTGGTGG+TGG | - | tig0024837:37604-37623 | None:intergenic | 60.0% |
| !! | GGATTCTTCGGTGGTGGTGG+TGG | - | tig0024837:37607-37626 | None:intergenic | 60.0% |
| GGGAGAGGATTCTTCGGTGG+TGG | - | tig0024837:37613-37632 | None:intergenic | 60.0% | |
| GACGGGAGAGGATTCTTCGG+TGG | - | tig0024837:37616-37635 | None:intergenic | 60.0% | |
| AATTGGGCTGTGGACGGGAG+AGG | - | tig0024837:37628-37647 | None:intergenic | 60.0% | |
| GGGGAGGTGAAATTGGGCTG+TGG | - | tig0024837:37638-37657 | None:intergenic | 60.0% | |
| ATGGGAGGAGACGGAGGTTG+GGG | - | tig0024837:37657-37676 | None:intergenic | 60.0% | |
| GATGGGAGGAGACGGAGGTT+GGG | - | tig0024837:37658-37677 | None:intergenic | 60.0% | |
| ACTACGATGGGAGGAGACGG+AGG | - | tig0024837:37663-37682 | None:intergenic | 60.0% | |
| ! | AAGCGGAAGGAGGCACATCG+TGG | - | tig0024837:37743-37762 | None:intergenic | 60.0% |
| GAGACGTCGTAAGCGGAAGG+AGG | - | tig0024837:37753-37772 | None:intergenic | 60.0% | |
| TTCCACCGGATCGAGCGCTT+TGG | + | tig0024837:38229-38248 | Msa1420700:CDS | 60.0% | |
| CAAGGCCCTGTCACGTTTGG+CGG | - | tig0024837:38754-38773 | None:intergenic | 60.0% | |
| GAGCAAGGCCCTGTCACGTT+TGG | - | tig0024837:38757-38776 | None:intergenic | 60.0% | |
| TGTGCCTGGGAGGTCGACTA+TGG | + | tig0024837:40368-40387 | Msa1420700:intron | 60.0% | |
| GCTTCCATAGTCGACCTCCC+AGG | - | tig0024837:40375-40394 | None:intergenic | 60.0% | |
| CCCTGGAGAGGAAAAGGGTG+AGG | + | tig0024837:40507-40526 | Msa1420700:intron | 60.0% | |
| ATGGGAGGCTAGAGACCTGG+AGG | + | tig0024837:40767-40786 | Msa1420700:intron | 60.0% | |
| !! | CGCTTCTAAGGCTTGCCTCC+AGG | - | tig0024837:40785-40804 | None:intergenic | 60.0% |
| AGTCAGACCGGACGGAGTGT+TGG | + | tig0024837:41084-41103 | Msa1420700:intron | 60.0% | |
| ! | GTCAGACCGGACGGAGTGTT+GGG | + | tig0024837:41085-41104 | Msa1420700:intron | 60.0% |
| TAACCGCCCAACACTCCGTC+CGG | - | tig0024837:41094-41113 | None:intergenic | 60.0% | |
| CATTCGCAAGCGCCTCCTAG+CGG | + | tig0024837:43060-43079 | Msa1420700:CDS | 60.0% | |
| ATTCGCAAGCGCCTCCTAGC+GGG | + | tig0024837:43061-43080 | Msa1420700:CDS | 60.0% | |
| GCGGGGGAGTGAGGAACAGT+GGG | - | tig0024837:37567-37586 | None:intergenic | 65.0% | |
| !! | TTCGGTGGTGGTGGTGGTGG+TGG | - | tig0024837:37601-37620 | None:intergenic | 65.0% |
| CGATGGGAGGAGACGGAGGT+TGG | - | tig0024837:37659-37678 | None:intergenic | 65.0% | |
| ! | GACCAAAGCGCTCGATCCGG+TGG | - | tig0024837:38234-38253 | None:intergenic | 65.0% |
| !! | AGACCGGACGGAGTGTTGGG+CGG | + | tig0024837:41088-41107 | Msa1420700:intron | 65.0% |
| AGGTGACCCAGAGGGTCCAC+AGG | + | tig0024837:42514-42533 | Msa1420700:CDS | 65.0% | |
| GGCGGGGGAGTGAGGAACAG+TGG | - | tig0024837:37568-37587 | None:intergenic | 70.0% | |
| TGTTCCTCACTCCCCCGCCG+CGG | + | tig0024837:37569-37588 | Msa1420700:CDS | 70.0% | |
| !! | GGTGGTGGTGGTGGTAGCCG+CGG | - | tig0024837:37589-37608 | None:intergenic | 70.0% |
| !! | GGTGGTGGTGGTGGTGGTGG+TGG | - | tig0024837:37595-37614 | None:intergenic | 70.0% |
| GGAGGAGACGGAGGTTGGGG+AGG | - | tig0024837:37654-37673 | None:intergenic | 70.0% | |
| !! | TGGTGGTGGTAGCCGCGGCG+GGG | - | tig0024837:37584-37603 | None:intergenic | 75.0% |
| !! | GTGGTGGTGGTAGCCGCGGC+GGG | - | tig0024837:37585-37604 | None:intergenic | 75.0% |
| !! | GGTGGTGGTGGTAGCCGCGG+CGG | - | tig0024837:37586-37605 | None:intergenic | 75.0% |
| ! | GTAGCCGCGGCGGGGGAGTG+AGG | - | tig0024837:37576-37595 | None:intergenic | 80.0% |
| !! | GGTGGTGGTAGCCGCGGCGG+GGG | - | tig0024837:37583-37602 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024837 | gene | 37426 | 43297 | 37426 | ID=Msa1420700;Name=Msa1420700 |
| tig0024837 | mRNA | 37426 | 43297 | 37426 | ID=Msa1420700-mRNA-1;Parent=Msa1420700;Name=Msa1420700-mRNA-1;_AED=0.10;_eAED=0.10;_QI=87|0.85|1|1|1|1|8|114|407 |
| tig0024837 | exon | 37426 | 37797 | 37426 | ID=Msa1420700-mRNA-1:exon:1654;Parent=Msa1420700-mRNA-1 |
| tig0024837 | exon | 37892 | 37984 | 37892 | ID=Msa1420700-mRNA-1:exon:1655;Parent=Msa1420700-mRNA-1 |
| tig0024837 | exon | 38213 | 38317 | 38213 | ID=Msa1420700-mRNA-1:exon:1656;Parent=Msa1420700-mRNA-1 |
| tig0024837 | exon | 38699 | 38851 | 38699 | ID=Msa1420700-mRNA-1:exon:1657;Parent=Msa1420700-mRNA-1 |
| tig0024837 | exon | 39599 | 39727 | 39599 | ID=Msa1420700-mRNA-1:exon:1658;Parent=Msa1420700-mRNA-1 |
| tig0024837 | exon | 41705 | 41884 | 41705 | ID=Msa1420700-mRNA-1:exon:1659;Parent=Msa1420700-mRNA-1 |
| tig0024837 | exon | 42419 | 42535 | 42419 | ID=Msa1420700-mRNA-1:exon:1660;Parent=Msa1420700-mRNA-1 |
| tig0024837 | exon | 43022 | 43297 | 43022 | ID=Msa1420700-mRNA-1:exon:1661;Parent=Msa1420700-mRNA-1 |
| tig0024837 | five_prime_UTR | 37426 | 37512 | 37426 | ID=Msa1420700-mRNA-1:five_prime_utr;Parent=Msa1420700-mRNA-1 |
| tig0024837 | CDS | 37513 | 37797 | 37513 | ID=Msa1420700-mRNA-1:cds;Parent=Msa1420700-mRNA-1 |
| tig0024837 | CDS | 37892 | 37984 | 37892 | ID=Msa1420700-mRNA-1:cds;Parent=Msa1420700-mRNA-1 |
| tig0024837 | CDS | 38213 | 38317 | 38213 | ID=Msa1420700-mRNA-1:cds;Parent=Msa1420700-mRNA-1 |
| tig0024837 | CDS | 38699 | 38851 | 38699 | ID=Msa1420700-mRNA-1:cds;Parent=Msa1420700-mRNA-1 |
| tig0024837 | CDS | 39599 | 39727 | 39599 | ID=Msa1420700-mRNA-1:cds;Parent=Msa1420700-mRNA-1 |
| tig0024837 | CDS | 41705 | 41884 | 41705 | ID=Msa1420700-mRNA-1:cds;Parent=Msa1420700-mRNA-1 |
| tig0024837 | CDS | 42419 | 42535 | 42419 | ID=Msa1420700-mRNA-1:cds;Parent=Msa1420700-mRNA-1 |
| tig0024837 | CDS | 43022 | 43183 | 43022 | ID=Msa1420700-mRNA-1:cds;Parent=Msa1420700-mRNA-1 |
| tig0024837 | three_prime_UTR | 43184 | 43297 | 43184 | ID=Msa1420700-mRNA-1:three_prime_utr;Parent=Msa1420700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
