Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0658720 | RHN61694.1 | 99.770 | 434 | 1 | 0 | 1 | 434 | 28 | 461 | 0.0 | 904 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0658720 | sp|Q9LTR9|NMT1_ARATH | 79.032 | 434 | 91 | 0 | 1 | 434 | 1 | 434 | 0.0 | 736 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0658720 | A0A396IBS8 | 99.770 | 434 | 1 | 0 | 1 | 434 | 28 | 461 | 0.0 | 904 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054730 | Msa0658720 | 0.810847 | 9.404284e-51 | -8.615850e-47 |
| Msa0607750 | Msa0658720 | 0.886865 | 2.356755e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0658720 | MtrunA17_Chr4g0039421 | 99.770 | 434 | 1 | 0 | 1 | 434 | 28 | 461 | 0.0 | 904 |
| Msa0658720 | MtrunA17_Chr2g0299701 | 80.907 | 419 | 76 | 1 | 20 | 434 | 4 | 422 | 0.0 | 719 |
| Msa0658720 | MtrunA17_Chr4g0039511 | 96.429 | 308 | 8 | 1 | 435 | 739 | 43 | 350 | 0.0 | 611 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0658720 | AT5G57020.1 | 79.032 | 434 | 91 | 0 | 1 | 434 | 1 | 434 | 0.0 | 736 |
| Msa0658720 | AT2G04940.1 | 70.033 | 307 | 79 | 3 | 436 | 739 | 96 | 392 | 5.31e-152 | 448 |
| Msa0658720 | AT2G44175.1 | 41.489 | 94 | 50 | 1 | 28 | 121 | 10 | 98 | 1.11e-18 | 82.8 |
Find 211 sgRNAs with CRISPR-Local
Find 606 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGACCAAAGACATAAATTT+TGG | 0.100981 | 4_3:+68888689 | Msa0658720:CDS |
| GCTTTCAAAGTTGAGTAATT+TGG | 0.173591 | 4_3:-68889600 | None:intergenic |
| CGTAGAGACCAAAATGAAAA+TGG | 0.190848 | 4_3:-68897672 | None:intergenic |
| AAACCCTCTCTTTAGGAAAT+TGG | 0.191081 | 4_3:+68894964 | Msa0658720:intron |
| TCAGTGACCTCGTGAGTTTC+AGG | 0.204412 | 4_3:-68889534 | None:intergenic |
| CTATGGGGAATGAGCTCTTT+AGG | 0.239543 | 4_3:+68894661 | Msa0658720:CDS |
| TTTCCCAAAATTTATGTCTT+TGG | 0.247451 | 4_3:-68888693 | None:intergenic |
| ACCGACATCAATTAGTTTCT+TGG | 0.257794 | 4_3:-68889274 | None:intergenic |
| CAAAACCGGTTTAGGTTTAC+TGG | 0.258655 | 4_3:-68890864 | None:intergenic |
| TCGGAAACAGATTGACTTAT+AGG | 0.267190 | 4_3:-68890896 | None:intergenic |
| CTGCGGTTACAAGGCTAATT+AGG | 0.267951 | 4_3:+68889406 | Msa0658720:CDS |
| GATCGTGATTGGAGGGGTTT+TGG | 0.285439 | 4_3:+68895576 | Msa0658720:CDS |
| TTCACCTCTTCGGGAGATTC+CGG | 0.287645 | 4_3:-68890929 | None:intergenic |
| GGTTGCTTCAAAACCGGTTT+AGG | 0.296401 | 4_3:-68890872 | None:intergenic |
| CTTTCAAAGTTGAGTAATTT+GGG | 0.299469 | 4_3:-68889599 | None:intergenic |
| TCAGCAGGTGCATTTCCATC+TGG | 0.302312 | 4_3:-68888613 | None:intergenic |
| TATAAAGGCAACCATCTTCT+TGG | 0.307468 | 4_3:-68889022 | None:intergenic |
| TGCTGCAGTTGCTTCGTCTA+AGG | 0.312933 | 4_3:+68894610 | Msa0658720:intron |
| TCAATTTATGCTGAAATTGA+TGG | 0.313653 | 4_3:+68894852 | Msa0658720:CDS |
| TGAAGTAGCCCGGAGGTTGC+AGG | 0.313936 | 4_3:-68888966 | None:intergenic |
| AGAATCCTGGCTTGTGGAAT+TGG | 0.325598 | 4_3:+68895508 | Msa0658720:CDS |
| CCGTGATGAGGTTGTTAATA+TGG | 0.329122 | 4_3:+68889071 | Msa0658720:CDS |
| GACACAAATTTCACCTCTTC+GGG | 0.330338 | 4_3:-68890938 | None:intergenic |
| CCTCATCACGGACTCGAATT+CGG | 0.339678 | 4_3:-68889059 | None:intergenic |
| TTCTTGAAGGAACTGAAGTT+TGG | 0.345695 | 4_3:+68889750 | Msa0658720:CDS |
| AGATTCCGGCTTCGAAAATT+CGG | 0.351003 | 4_3:-68890915 | None:intergenic |
| GCGCTGGGCCCTGCAACCTC+CGG | 0.353029 | 4_3:+68888957 | Msa0658720:CDS |
| AAGATGGTTGCCTTTATAAC+AGG | 0.354888 | 4_3:+68889027 | Msa0658720:CDS |
| TTCACAGGCGGTGGCATCTC+TGG | 0.360142 | 4_3:+68894992 | Msa0658720:CDS |
| CGCATTAGCAAGGCCAATCT+TGG | 0.361117 | 4_3:-68896977 | None:intergenic |
| CCTGGTGTGACTGTTGATTC+TGG | 0.363701 | 4_3:-68889354 | None:intergenic |
| GAATGTTGTCGATAGTTATC+TGG | 0.365092 | 4_3:+68889503 | Msa0658720:CDS |
| GTTAGGTCCGTAGACCCTTT+TGG | 0.367214 | 4_3:+68894817 | Msa0658720:intron |
| ATTCTCCAAGTGCACCCTTC+TGG | 0.370742 | 4_3:-68889169 | None:intergenic |
| GAGTGGGCAAATCTTGTATT+GGG | 0.371121 | 4_3:+68891923 | Msa0658720:CDS |
| TGGAGCATTGGCTTCTTCCT+AGG | 0.375688 | 4_3:+68889478 | Msa0658720:CDS |
| CTCATCACGGACTCGAATTC+GGG | 0.375743 | 4_3:-68889058 | None:intergenic |
| TACTTCACAGCTTGGCATAT+TGG | 0.377050 | 4_3:+68888982 | Msa0658720:CDS |
| AGTCCTGATTATTGCTTTGT+TGG | 0.380124 | 4_3:+68897601 | Msa0658720:three_prime_UTR |
| CAGCAGGTGCATTTCCATCT+GGG | 0.382043 | 4_3:-68888612 | None:intergenic |
| CCGACATCAATTAGTTTCTT+GGG | 0.382092 | 4_3:-68889273 | None:intergenic |
| GGGTGCACTTGGAGAATATA+TGG | 0.383844 | 4_3:+68889175 | Msa0658720:CDS |
| AAGATGATGAGAACATGTTT+AGG | 0.387407 | 4_3:+68888911 | Msa0658720:CDS |
| TCTTGTATTGGGATTTGAAC+AGG | 0.390283 | 4_3:+68891934 | Msa0658720:CDS |
| CAGTAGCAACTTGCCAATAC+TGG | 0.390437 | 4_3:+68889235 | Msa0658720:CDS |
| GGTGCATTTCCATCTGGGTT+GGG | 0.393200 | 4_3:-68888607 | None:intergenic |
| TATGGGGAATGAGCTCTTTA+GGG | 0.398753 | 4_3:+68894662 | Msa0658720:CDS |
| GGCAGGGATACCTGTTATAA+AGG | 0.401328 | 4_3:-68889037 | None:intergenic |
| GGACACAAATTTCACCTCTT+CGG | 0.403789 | 4_3:-68890939 | None:intergenic |
| GTTTCTCTCGGCTCGGTGCT+CGG | 0.405888 | 4_3:+68889295 | Msa0658720:CDS |
| GTTGGGCAGTTCAAGGATAT+AGG | 0.408153 | 4_3:+68888724 | Msa0658720:CDS |
| CCCCTTATCTGAGGTAAAAC+AGG | 0.409550 | 4_3:+68888786 | Msa0658720:CDS |
| GTCTTGATCTTGATCCTAGA+TGG | 0.410568 | 4_3:+68890801 | Msa0658720:CDS |
| CGCTGGGCCCTGCAACCTCC+GGG | 0.413953 | 4_3:+68888958 | Msa0658720:CDS |
| CGAGTGGGCAAATCTTGTAT+TGG | 0.415994 | 4_3:+68891922 | Msa0658720:CDS |
| GCAAAATGAAAGCTTCTTGA+AGG | 0.425222 | 4_3:+68889737 | Msa0658720:CDS |
| TGTTAAAACTTCCAAGAAGA+TGG | 0.425379 | 4_3:+68889011 | Msa0658720:CDS |
| GGTCAGTATGTGATTCGATT+TGG | 0.425980 | 4_3:+68896937 | Msa0658720:CDS |
| ACCTTCCTAACCTCTATGAA+TGG | 0.426427 | 4_3:+68888818 | Msa0658720:CDS |
| ATATCCTTGAACTGCCCAAC+AGG | 0.427798 | 4_3:-68888721 | None:intergenic |
| TGAGCTTGTTATCCACCAAA+AGG | 0.430421 | 4_3:-68894832 | None:intergenic |
| TAAAAGTACAAGGATTAATC+AGG | 0.437146 | 4_3:-68897647 | None:intergenic |
| TTGGGCAGTTCAAGGATATA+GGG | 0.438419 | 4_3:+68888725 | Msa0658720:CDS |
| CTCACCATCAGCATCTTTCA+AGG | 0.439252 | 4_3:-68895538 | None:intergenic |
| TCAGTGGACGTCTGACTTCA+AGG | 0.443624 | 4_3:-68897088 | None:intergenic |
| TATTGAATTGAATACCTGTC+TGG | 0.444419 | 4_3:-68892363 | None:intergenic |
| ACACTTCCTTCTAGTATCCT+TGG | 0.449112 | 4_3:+68889573 | Msa0658720:CDS |
| CAACCAACAAAGCAATAATC+AGG | 0.449357 | 4_3:-68897604 | None:intergenic |
| TTTGCGGTGGTTGAGAATCC+TGG | 0.453002 | 4_3:+68895495 | Msa0658720:CDS |
| CTGATTATTGCTTTGTTGGT+TGG | 0.454809 | 4_3:+68897605 | Msa0658720:three_prime_UTR |
| CAACATAATTATTAGCAAGA+AGG | 0.456558 | 4_3:-68888888 | None:intergenic |
| GGTGGTTCGATAGGACCTTC+AGG | 0.457527 | 4_3:-68888760 | None:intergenic |
| AGCAAGGCCAATCTTGGAGC+TGG | 0.457642 | 4_3:-68896971 | None:intergenic |
| TTATGCTGAAATTGATGGTA+AGG | 0.461099 | 4_3:+68894857 | Msa0658720:CDS |
| ATAGGAGGTTGCTTCAAAAC+CGG | 0.461518 | 4_3:-68890878 | None:intergenic |
| ATCTCTGGTAATTAGTAAGT+TGG | 0.461558 | 4_3:-68891897 | None:intergenic |
| CAATAATCAGGACTATTTCA+TGG | 0.462932 | 4_3:-68897592 | None:intergenic |
| TAGAGGTTAGGAAGGTTGTA+TGG | 0.462978 | 4_3:-68888811 | None:intergenic |
| TCTGATCCCAGCTCCAAGAT+TGG | 0.466750 | 4_3:+68896964 | Msa0658720:CDS |
| AGCTACAGCAACTGCTCTCT+CGG | 0.467127 | 4_3:-68897117 | None:intergenic |
| CATTGAAGTCATCAGAGCTT+GGG | 0.467422 | 4_3:+68889826 | Msa0658720:CDS |
| GTTGATAGCAATCCTTCCTC+TGG | 0.471116 | 4_3:+68888562 | Msa0658720:CDS |
| GGGTTGCCAAGGATACTAGA+AGG | 0.472607 | 4_3:-68889579 | None:intergenic |
| TCAACCTGTTGGGCAGTTCA+AGG | 0.473546 | 4_3:+68888717 | Msa0658720:CDS |
| AGGAAATTGGAGTAGTTCAC+AGG | 0.474536 | 4_3:+68894977 | Msa0658720:intron |
| TTCGAAGGAATTTCTGCGCT+GGG | 0.475576 | 4_3:+68888942 | Msa0658720:CDS |
| AACATAATTATTAGCAAGAA+GGG | 0.476139 | 4_3:-68888887 | None:intergenic |
| CACACCAGGGTTTAGAAAGA+TGG | 0.478975 | 4_3:+68889368 | Msa0658720:CDS |
| TTACTCGCCGACGTCAATGA+AGG | 0.480984 | 4_3:-68897379 | None:intergenic |
| CTCAAATAGATCGTGATTGG+AGG | 0.481455 | 4_3:+68895568 | Msa0658720:CDS |
| ATCTCTACAACTATCGAGTA+AGG | 0.482835 | 4_3:+68889799 | Msa0658720:CDS |
| AGGTGCATTTCCATCTGGGT+TGG | 0.483616 | 4_3:-68888608 | None:intergenic |
| TTTGGGAAACTCAACCTGTT+GGG | 0.485400 | 4_3:+68888707 | Msa0658720:CDS |
| TACATGAATGGAGCCGTCCT+TGG | 0.486869 | 4_3:-68897505 | None:intergenic |
| GTAGAGACCAAAATGAAAAT+GGG | 0.490063 | 4_3:-68897671 | None:intergenic |
| CAGTATTGGCAAGTTGCTAC+TGG | 0.490516 | 4_3:-68889234 | None:intergenic |
| ATGATGTTCCTGCGGTTACA+AGG | 0.491268 | 4_3:+68889397 | Msa0658720:CDS |
| GCATTGTAGGAAAATCGTTA+TGG | 0.491569 | 4_3:+68892171 | Msa0658720:intron |
| TCAAAGATCTGTGCCAGTAT+TGG | 0.491976 | 4_3:-68889248 | None:intergenic |
| TGTCACCAGTAAACCTAAAC+CGG | 0.492151 | 4_3:+68890859 | Msa0658720:CDS |
| GTCACCTCTTTGATCATGAC+AGG | 0.495174 | 4_3:-68889147 | None:intergenic |
| TGGCCTTGCCATCCAGCAAA+AGG | 0.495585 | 4_3:-68897572 | None:intergenic |
| ATTTGACAGACAGTATCATC+TGG | 0.497462 | 4_3:+68897407 | Msa0658720:three_prime_UTR |
| TCAGTTATGTGTGCAACAAA+AGG | 0.499104 | 4_3:-68894636 | None:intergenic |
| TGCACACATAACTGATGCTA+TGG | 0.502160 | 4_3:+68894644 | Msa0658720:CDS |
| GTAACCCATTCATAGAGGTT+AGG | 0.503092 | 4_3:-68888823 | None:intergenic |
| CATTCATCAGCTGAAGCAAA+GGG | 0.503326 | 4_3:-68889656 | None:intergenic |
| GGTGACCAGAAGGGTGCACT+TGG | 0.504257 | 4_3:+68889164 | Msa0658720:CDS |
| TTGAGTAATTTGGGTTGCCA+AGG | 0.505565 | 4_3:-68889590 | None:intergenic |
| AGGTAGCACCTCTACTTGCC+AGG | 0.507651 | 4_3:+68891873 | Msa0658720:CDS |
| GAATCTATGATTTGTACCTC+GGG | 0.508107 | 4_3:+68895019 | Msa0658720:CDS |
| GATGAAGCAGAAAACCATCT+AGG | 0.510171 | 4_3:-68890815 | None:intergenic |
| GTCAAACTCTGGGTTTCTGA+TGG | 0.510808 | 4_3:+68890734 | Msa0658720:CDS |
| ATTTGCCCACTCGATATCTC+TGG | 0.512952 | 4_3:-68891912 | None:intergenic |
| CCTTCCTAACCTCTATGAAT+GGG | 0.513056 | 4_3:+68888819 | Msa0658720:CDS |
| GGAGCATTGGCTTCTTCCTA+GGG | 0.513324 | 4_3:+68889479 | Msa0658720:CDS |
| GCATTGAAGTCATCAGAGCT+TGG | 0.516250 | 4_3:+68889825 | Msa0658720:CDS |
| ATTCGAAGGAATTTCTGCGC+TGG | 0.519044 | 4_3:+68888941 | Msa0658720:CDS |
| CTCCGGGCTACTTCACAGCT+TGG | 0.520105 | 4_3:+68888974 | Msa0658720:CDS |
| GCTCTCTCGGCAAGGGTCAG+TGG | 0.520246 | 4_3:-68897104 | None:intergenic |
| TTGCTCAAATAGATCGTGAT+TGG | 0.520327 | 4_3:+68895565 | Msa0658720:CDS |
| TCACGGACTCGAATTCGGGC+AGG | 0.527541 | 4_3:-68889054 | None:intergenic |
| CCCATTCATAGAGGTTAGGA+AGG | 0.528278 | 4_3:-68888819 | None:intergenic |
| TGCTGAAAGTGATCTTGCAT+TGG | 0.528701 | 4_3:+68888630 | Msa0658720:CDS |
| ACGAAAATGATGTGGAGCAT+TGG | 0.530628 | 4_3:+68889466 | Msa0658720:CDS |
| GGCAAGTAGAGGTGCTACCT+TGG | 0.531652 | 4_3:-68891870 | None:intergenic |
| TGGCAAGTTGCTACTGGTGT+AGG | 0.531802 | 4_3:-68889228 | None:intergenic |
| TTGGAGTAGTTCACAGGCGG+TGG | 0.534547 | 4_3:+68894983 | Msa0658720:CDS |
| AGAATCTATGATTTGTACCT+CGG | 0.536007 | 4_3:+68895018 | Msa0658720:CDS |
| CATGACAGGAGCAAGCCTCT+TGG | 0.536419 | 4_3:-68889133 | None:intergenic |
| AATGTCCAATTCCACAAGCC+AGG | 0.537197 | 4_3:-68895513 | None:intergenic |
| TAATTGATGTCGGTTTCTCT+CGG | 0.541266 | 4_3:+68889283 | Msa0658720:CDS |
| CAGCAACTGCTCTCTCGGCA+AGG | 0.541337 | 4_3:-68897112 | None:intergenic |
| GAAGTAGCCCGGAGGTTGCA+GGG | 0.543684 | 4_3:-68888965 | None:intergenic |
| GAGCTTGTTATCCACCAAAA+GGG | 0.546499 | 4_3:-68894831 | None:intergenic |
| TCATTCATCAGCTGAAGCAA+AGG | 0.547013 | 4_3:-68889657 | None:intergenic |
| CACGGACTCGAATTCGGGCA+GGG | 0.550332 | 4_3:-68889053 | None:intergenic |
| AAGAATCACTCCTGCTGTGT+AGG | 0.552278 | 4_3:-68889205 | None:intergenic |
| GATGTCGGTTTCTCTCGGCT+CGG | 0.552576 | 4_3:+68889288 | Msa0658720:CDS |
| CAAGATTGGCCTTGCTAATG+CGG | 0.552784 | 4_3:+68896978 | Msa0658720:CDS |
| TGCCAAGCTGTGAAGTAGCC+CGG | 0.554188 | 4_3:-68888976 | None:intergenic |
| ATTTCCATCTTTCTAAACCC+TGG | 0.555658 | 4_3:-68889372 | None:intergenic |
| CTAATTAGCCTTGTAACCGC+AGG | 0.559185 | 4_3:-68889405 | None:intergenic |
| CCAGAATCAACAGTCACACC+AGG | 0.560206 | 4_3:+68889354 | Msa0658720:CDS |
| TGCAGTTGCTTCGTCTAAGG+AGG | 0.560490 | 4_3:+68894613 | Msa0658720:intron |
| TTGCAGGAATCAGCAATTTG+CGG | 0.560490 | 4_3:+68895479 | Msa0658720:intron |
| CCCAAGAAACTAATTGATGT+CGG | 0.561835 | 4_3:+68889273 | Msa0658720:CDS |
| TACTCGCCGACGTCAATGAA+GGG | 0.562477 | 4_3:-68897378 | None:intergenic |
| ATAGGACCTTCAGGCAAAGT+GGG | 0.564234 | 4_3:-68888751 | None:intergenic |
| TTATCCACCAAAAGGGTCTA+CGG | 0.565740 | 4_3:-68894824 | None:intergenic |
| TGGCAGGCTGCCTACACAGC+AGG | 0.566798 | 4_3:+68889195 | Msa0658720:CDS |
| TGTTCACGAATTAAACCTAC+AGG | 0.566894 | 4_3:-68892326 | None:intergenic |
| TGAATACCTGTCTGGTAATG+AGG | 0.571239 | 4_3:-68892355 | None:intergenic |
| GAAACAGATTGACTTATAGG+AGG | 0.571966 | 4_3:-68890893 | None:intergenic |
| TCAAATAGATCGTGATTGGA+GGG | 0.572017 | 4_3:+68895569 | Msa0658720:CDS |
| AGCAACTGCTCTCTCGGCAA+GGG | 0.573135 | 4_3:-68897111 | None:intergenic |
| CTATCGACAACATTCTCCCT+AGG | 0.573804 | 4_3:-68889495 | None:intergenic |
| GCAAGGCCAATCTTGGAGCT+GGG | 0.574296 | 4_3:-68896970 | None:intergenic |
| TGATCAAAGAGGTGACCAGA+AGG | 0.575360 | 4_3:+68889154 | Msa0658720:CDS |
| AATGCAAGATCACTTTCAGC+AGG | 0.575390 | 4_3:-68888628 | None:intergenic |
| CACAAGTAACCCATTCATAG+AGG | 0.576099 | 4_3:-68888828 | None:intergenic |
| GTGCAGATTCTAACTGATGC+TGG | 0.579776 | 4_3:+68896916 | Msa0658720:intron |
| ACTCAAAATCCCAACCCAGA+TGG | 0.582100 | 4_3:+68888598 | Msa0658720:CDS |
| CTGAAGTTTGGACCAGGTGA+TGG | 0.583002 | 4_3:+68889762 | Msa0658720:CDS |
| GTTTAGGTTTAACTATTCGA+AGG | 0.584434 | 4_3:+68888927 | Msa0658720:CDS |
| GAGCAACCTCATTACCAGAC+AGG | 0.587136 | 4_3:+68892349 | Msa0658720:CDS |
| CTTGTTATGATGCAGCCTGT+AGG | 0.587642 | 4_3:+68892311 | Msa0658720:intron |
| GATAGGACCTTCAGGCAAAG+TGG | 0.591235 | 4_3:-68888752 | None:intergenic |
| GCACTTGGAGAATATATGGC+AGG | 0.591925 | 4_3:+68889179 | Msa0658720:CDS |
| ACTTCTCAAGACATGGAGGC+TGG | 0.595206 | 4_3:+68897165 | Msa0658720:CDS |
| GGGAACCCCACTTTGCCTGA+AGG | 0.595352 | 4_3:+68888745 | Msa0658720:CDS |
| CAAATAGATCGTGATTGGAG+GGG | 0.598718 | 4_3:+68895570 | Msa0658720:CDS |
| GGTAATTAGTAAGTTGGACC+TGG | 0.599242 | 4_3:-68891891 | None:intergenic |
| CAGGAATCAGCAATTTGCGG+TGG | 0.606638 | 4_3:+68895482 | Msa0658720:intron |
| AAGGAACTGAAGTTTGGACC+AGG | 0.609351 | 4_3:+68889756 | Msa0658720:CDS |
| TCTTCAGGTGATCCAGAGGA+AGG | 0.613470 | 4_3:-68888574 | None:intergenic |
| TGGTTGAGAATCCTGGCTTG+TGG | 0.613686 | 4_3:+68895502 | Msa0658720:CDS |
| GGATCATCACTGACCGACTG+TGG | 0.613989 | 4_3:-68892213 | None:intergenic |
| AATGACTACTTCTCAAGACA+TGG | 0.617241 | 4_3:+68897158 | Msa0658720:CDS |
| AGATTCTGACCGCATTAGCA+AGG | 0.618266 | 4_3:-68896987 | None:intergenic |
| GCACACATAACTGATGCTAT+GGG | 0.620117 | 4_3:+68894645 | Msa0658720:CDS |
| GAAAATGGGATAAAAGTACA+AGG | 0.621080 | 4_3:-68897657 | None:intergenic |
| TAATGAAGTTTACCATCACC+TGG | 0.622265 | 4_3:-68889774 | None:intergenic |
| CCATATTAACAACCTCATCA+CGG | 0.625479 | 4_3:-68889071 | None:intergenic |
| GGATTACCCTTCATTGACGT+CGG | 0.628439 | 4_3:+68897372 | Msa0658720:CDS |
| ACAAGAAGCTTCGAACCAAG+AGG | 0.628890 | 4_3:+68889118 | Msa0658720:CDS |
| GATCAAAGAGGTGACCAGAA+GGG | 0.633175 | 4_3:+68889155 | Msa0658720:CDS |
| AAGTTGGACCTGGCAAGTAG+AGG | 0.633622 | 4_3:-68891881 | None:intergenic |
| CCGAATTCGAGTCCGTGATG+AGG | 0.640464 | 4_3:+68889059 | Msa0658720:CDS |
| AGTCTCTTCAGGTGATCCAG+AGG | 0.644950 | 4_3:-68888578 | None:intergenic |
| TAATTACCAGAGATATCGAG+TGG | 0.652682 | 4_3:+68891906 | Msa0658720:CDS |
| CACACATAACTGATGCTATG+GGG | 0.654694 | 4_3:+68894646 | Msa0658720:CDS |
| GGAAATTCATGATGTTCCTG+CGG | 0.655183 | 4_3:+68889389 | Msa0658720:CDS |
| TCTAAGCTAAACACCAAGGA+CGG | 0.655826 | 4_3:+68897492 | Msa0658720:three_prime_UTR |
| TAGGATCAAGATCAAGACCT+CGG | 0.656371 | 4_3:-68890796 | None:intergenic |
| GATCATCACTGACCGACTGT+GGG | 0.664898 | 4_3:-68892212 | None:intergenic |
| CTTGAAAGATGCTGATGGTG+AGG | 0.675849 | 4_3:+68895539 | Msa0658720:CDS |
| TGCTCCTGTCATGATCAAAG+AGG | 0.676350 | 4_3:+68889143 | Msa0658720:CDS |
| GAAGCCGGAATCTCCCGAAG+AGG | 0.681514 | 4_3:+68890925 | Msa0658720:CDS |
| TAGGACCTTCAGGCAAAGTG+GGG | 0.681811 | 4_3:-68888750 | None:intergenic |
| AGAAAATCGATCAAATGCCG+AGG | 0.682752 | 4_3:+68890779 | Msa0658720:CDS |
| AGATGCATGCTACCCACAGT+CGG | 0.688563 | 4_3:+68892200 | Msa0658720:CDS |
| TTCACCTTGAAAGATGCTGA+TGG | 0.690552 | 4_3:+68895534 | Msa0658720:CDS |
| GACTACTTCTCAAGACATGG+AGG | 0.699773 | 4_3:+68897161 | Msa0658720:CDS |
| AAATTGGAGTAGTTCACAGG+CGG | 0.709413 | 4_3:+68894980 | Msa0658720:CDS |
| CAGAATCAACAGTCACACCA+GGG | 0.712272 | 4_3:+68889355 | Msa0658720:CDS |
| ATTCATCAGCTGAAGCAAAG+GGG | 0.718075 | 4_3:-68889655 | None:intergenic |
| AATTACCAGAGATATCGAGT+GGG | 0.721343 | 4_3:+68891907 | Msa0658720:CDS |
| TGAAAGTCCTGAAACTCACG+AGG | 0.726533 | 4_3:+68889527 | Msa0658720:CDS |
| GTGTTCTAAGCTAAACACCA+AGG | 0.736608 | 4_3:+68897488 | Msa0658720:three_prime_UTR |
| CAAGCTGTGAAGTAGCCCGG+AGG | 0.761817 | 4_3:-68888973 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACAAAAACAATATAAAA+AGG | - | chr4_3:68891691-68891710 | None:intergenic | 10.0% |
| !!! | TGTACAATATTTTATAAAAA+TGG | - | chr4_3:68894887-68894906 | None:intergenic | 10.0% |
| !!! | TTTTTTTTCCTTAATTTTTT+TGG | + | chr4_3:68897340-68897359 | Msa0658720:intron | 10.0% |
| !!! | TTTTTTTCCTTAATTTTTTT+GGG | + | chr4_3:68897341-68897360 | Msa0658720:intron | 10.0% |
| !!! | TATTTTACATATGCATTTAA+TGG | + | chr4_3:68891166-68891185 | Msa0658720:intron | 15.0% |
| !!! | ATAATTGGATACTATTTTAA+AGG | - | chr4_3:68891715-68891734 | None:intergenic | 15.0% |
| !! | TAGCTAAATATATATTATTG+GGG | - | chr4_3:68892520-68892539 | None:intergenic | 15.0% |
| !! | GTAGCTAAATATATATTATT+GGG | - | chr4_3:68892521-68892540 | None:intergenic | 15.0% |
| !! | TGTTAAAAACTATTAGAAAT+AGG | + | chr4_3:68892557-68892576 | Msa0658720:intron | 15.0% |
| !! | ATATACTAACTAAAAAAAAG+TGG | - | chr4_3:68892597-68892616 | None:intergenic | 15.0% |
| !! | TAGCTAAATATATATTATTG+GGG | - | chr4_3:68892520-68892539 | None:intergenic | 15.0% |
| !! | GTAGCTAAATATATATTATT+GGG | - | chr4_3:68892521-68892540 | None:intergenic | 15.0% |
| !! | TGTTAAAAACTATTAGAAAT+AGG | + | chr4_3:68892557-68892576 | Msa0658720:intron | 15.0% |
| !! | TTTAATGTTCAATTCAAATA+AGG | - | chr4_3:68893398-68893417 | None:intergenic | 15.0% |
| !! | TTATTTGAATTGAACATTAA+AGG | + | chr4_3:68893397-68893416 | Msa0658720:intron | 15.0% |
| !! | TATTTGAATTGAACATTAAA+GGG | + | chr4_3:68893398-68893417 | Msa0658720:intron | 15.0% |
| !!! | GTTGATTTTGAAAAAAATTA+GGG | - | chr4_3:68893663-68893682 | None:intergenic | 15.0% |
| !!! | AGTTGATTTTGAAAAAAATT+AGG | - | chr4_3:68893664-68893683 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTTGTCTTTTCT+AGG | + | chr4_3:68894210-68894229 | Msa0658720:intron | 15.0% |
| !! | AAAAAATGGAATGAAATAAA+AGG | - | chr4_3:68894583-68894602 | None:intergenic | 15.0% |
| !! | AAACAGAAATATATTATAAG+GGG | - | chr4_3:68895230-68895249 | None:intergenic | 15.0% |
| !! | GAAACAGAAATATATTATAA+GGG | - | chr4_3:68895231-68895250 | None:intergenic | 15.0% |
| !! | AGAAACAGAAATATATTATA+AGG | - | chr4_3:68895232-68895251 | None:intergenic | 15.0% |
| !! | TAAAACCAATAAAATAAGTA+AGG | - | chr4_3:68895387-68895406 | None:intergenic | 15.0% |
| !!! | CTTATTTTATTGGTTTTATT+TGG | + | chr4_3:68895389-68895408 | Msa0658720:intron | 15.0% |
| !!! | TAACAAATTTGGATTAATTT+TGG | - | chr4_3:68895809-68895828 | None:intergenic | 15.0% |
| !! | TTTGATAGAATTAACAAATT+TGG | - | chr4_3:68895820-68895839 | None:intergenic | 15.0% |
| !! | AAAGATATACAAATATTCAT+AGG | - | chr4_3:68896372-68896391 | None:intergenic | 15.0% |
| !!! | TACAAAAGTAGTTTTTAAAT+TGG | + | chr4_3:68897466-68897485 | Msa0658720:three_prime_UTR | 15.0% |
| !! | AACATAATTATTAGCAAGAA+GGG | - | chr4_3:68888890-68888909 | None:intergenic | 20.0% |
| !! | CAAAAATAAAGCAAAACTTA+AGG | - | chr4_3:68889968-68889987 | None:intergenic | 20.0% |
| !!! | TTATTTTTATTACATGATCC+TGG | + | chr4_3:68890166-68890185 | Msa0658720:intron | 20.0% |
| !!! | ATCTCCTTTTTTAAATACTA+AGG | + | chr4_3:68890430-68890449 | Msa0658720:intron | 20.0% |
| !! | AAAAAAAAAATCACAAACAC+AGG | - | chr4_3:68890556-68890575 | None:intergenic | 20.0% |
| !!! | NNNNNNNAAACCAAGCTTTT+CGG | + | chr4_3:68890674-68890693 | Msa0658720:intron | 20.0% |
| !! | ACTTGATAAAAATCCTTAAA+AGG | + | chr4_3:68891423-68891442 | Msa0658720:intron | 20.0% |
| !! | GGTAGCTAAATATATATTAT+TGG | - | chr4_3:68892522-68892541 | None:intergenic | 20.0% |
| !! | TTAACAAATAAACTCATTTG+TGG | - | chr4_3:68892543-68892562 | None:intergenic | 20.0% |
| !!! | AAAAAAAAGTGGATATCTTT+TGG | - | chr4_3:68892586-68892605 | None:intergenic | 20.0% |
| !! | GGTAGCTAAATATATATTAT+TGG | - | chr4_3:68892522-68892541 | None:intergenic | 20.0% |
| !! | TTAACAAATAAACTCATTTG+TGG | - | chr4_3:68892543-68892562 | None:intergenic | 20.0% |
| !!! | CTTTTTCCTAGAAAAAATTA+AGG | + | chr4_3:68893032-68893051 | Msa0658720:intron | 20.0% |
| !! | ATTAAACATAAGATCTATAC+CGG | - | chr4_3:68893289-68893308 | None:intergenic | 20.0% |
| !! | TTCTTTACATTAAAACTACA+GGG | - | chr4_3:68893470-68893489 | None:intergenic | 20.0% |
| !!! | CCTTTTCAGAAAAAAATTAA+GGG | - | chr4_3:68893502-68893521 | None:intergenic | 20.0% |
| !!! | TCCTTTTCAGAAAAAAATTA+AGG | - | chr4_3:68893503-68893522 | None:intergenic | 20.0% |
| !! | CTTATATGAAAGGAATTAAA+AGG | - | chr4_3:68893777-68893796 | None:intergenic | 20.0% |
| !!! | GTAAAGAGATTTTATACATT+GGG | - | chr4_3:68894114-68894133 | None:intergenic | 20.0% |
| !!! | TGTAAAGAGATTTTATACAT+TGG | - | chr4_3:68894115-68894134 | None:intergenic | 20.0% |
| !! | TAAGTTGTTTATGAGAAATT+TGG | + | chr4_3:68894927-68894946 | Msa0658720:intron | 20.0% |
| !! | CAAAAAATATTCATACTACT+AGG | - | chr4_3:68895179-68895198 | None:intergenic | 20.0% |
| !! | AAAATTTGTAACTGCATTAT+CGG | + | chr4_3:68895763-68895782 | Msa0658720:intron | 20.0% |
| !! | GTTAATTCTATCAAATTAAC+TGG | + | chr4_3:68895825-68895844 | Msa0658720:intron | 20.0% |
| !! | AACGTTTGAAAATGTAAATA+TGG | + | chr4_3:68896133-68896152 | Msa0658720:intron | 20.0% |
| !!! | TCATGTTTTGTTTTTTGAAA+AGG | + | chr4_3:68896209-68896228 | Msa0658720:intron | 20.0% |
| !!! | AATTCTCAATTTTACATGAA+TGG | - | chr4_3:68897520-68897539 | None:intergenic | 20.0% |
| ! | TTTCCCAAAATTTATGTCTT+TGG | - | chr4_3:68888696-68888715 | None:intergenic | 25.0% |
| ! | CAACATAATTATTAGCAAGA+AGG | - | chr4_3:68888891-68888910 | None:intergenic | 25.0% |
| ! | CTTTCAAAGTTGAGTAATTT+GGG | - | chr4_3:68889602-68889621 | None:intergenic | 25.0% |
| !!! | GTTCAAATTTTGGAGATTTA+TGG | + | chr4_3:68889863-68889882 | Msa0658720:intron | 25.0% |
| !!! | AATTTTGGAGATTTATGGTA+TGG | + | chr4_3:68889868-68889887 | Msa0658720:intron | 25.0% |
| !! | ATTTTTGTTCATGCTGATAA+TGG | + | chr4_3:68890081-68890100 | Msa0658720:intron | 25.0% |
| !!! | CCTTTTTTAAATACTAAGGT+CGG | + | chr4_3:68890434-68890453 | Msa0658720:intron | 25.0% |
| ! | AGGGATTTCAGAAAAATAAA+GGG | + | chr4_3:68891047-68891066 | Msa0658720:intron | 25.0% |
| ! | TTCAGAAAAATAAAGGGAAT+AGG | + | chr4_3:68891053-68891072 | Msa0658720:intron | 25.0% |
| ! | TCAGAAAAATAAAGGGAATA+GGG | + | chr4_3:68891054-68891073 | Msa0658720:intron | 25.0% |
| ! | TTCATATTCATCAATTGACA+TGG | - | chr4_3:68891199-68891218 | None:intergenic | 25.0% |
| !! | TAAACACTCATAACCTTTTA+AGG | - | chr4_3:68891439-68891458 | None:intergenic | 25.0% |
| ! | TTTATAGATAAGCTAAACAG+AGG | + | chr4_3:68891455-68891474 | Msa0658720:intron | 25.0% |
| ! | TTATAGATAAGCTAAACAGA+GGG | + | chr4_3:68891456-68891475 | Msa0658720:intron | 25.0% |
| ! | TTTCTAATCTACATTACTAG+AGG | - | chr4_3:68891598-68891617 | None:intergenic | 25.0% |
| ! | AGTAATGTAGATTAGAAATG+AGG | + | chr4_3:68891600-68891619 | Msa0658720:intron | 25.0% |
| !! | TTTTCGGAAGCTATATTTTA+AGG | + | chr4_3:68891654-68891673 | Msa0658720:intron | 25.0% |
| ! | TACGTATAGAAAAGGATAAT+TGG | - | chr4_3:68891730-68891749 | None:intergenic | 25.0% |
| ! | GAAGAAAATACGTATAGAAA+AGG | - | chr4_3:68891738-68891757 | None:intergenic | 25.0% |
| !! | AAACGAAGGATTTAGAATTA+GGG | - | chr4_3:68891802-68891821 | None:intergenic | 25.0% |
| ! | TATGCGACAAATATAACTAA+AGG | - | chr4_3:68891989-68892008 | None:intergenic | 25.0% |
| ! | ATAATTATGTTAGAAGATGC+AGG | - | chr4_3:68892096-68892115 | None:intergenic | 25.0% |
| ! | ATAATAGTAAACAGAAGATG+AGG | - | chr4_3:68892237-68892256 | None:intergenic | 25.0% |
| ! | TGTATAGAATAAGCAATCAA+AGG | - | chr4_3:68892404-68892423 | None:intergenic | 25.0% |
| !! | TCAAAAAAGTGGATATCTTT+TGG | - | chr4_3:68892700-68892719 | None:intergenic | 25.0% |
| ! | AAATGCATCTATCAAAAAAG+TGG | - | chr4_3:68892711-68892730 | None:intergenic | 25.0% |
| ! | TCACTAGTGAAATCTAATTT+GGG | - | chr4_3:68893320-68893339 | None:intergenic | 25.0% |
| ! | ATCACTAGTGAAATCTAATT+TGG | - | chr4_3:68893321-68893340 | None:intergenic | 25.0% |
| ! | CTATCATCACATATAATCAA+TGG | - | chr4_3:68893370-68893389 | None:intergenic | 25.0% |
| !!! | GTGGTTTTATAGAAATCTAA+GGG | - | chr4_3:68893440-68893459 | None:intergenic | 25.0% |
| !!! | TGTGGTTTTATAGAAATCTA+AGG | - | chr4_3:68893441-68893460 | None:intergenic | 25.0% |
| ! | TCTTTACATTAAAACTACAG+GGG | - | chr4_3:68893469-68893488 | None:intergenic | 25.0% |
| ! | GTTCTTTACATTAAAACTAC+AGG | - | chr4_3:68893471-68893490 | None:intergenic | 25.0% |
| !!! | CCCTTAATTTTTTTCTGAAA+AGG | + | chr4_3:68893499-68893518 | Msa0658720:intron | 25.0% |
| ! | GGAATTAAAAGGATTATCAT+GGG | - | chr4_3:68893766-68893785 | None:intergenic | 25.0% |
| ! | AGGAATTAAAAGGATTATCA+TGG | - | chr4_3:68893767-68893786 | None:intergenic | 25.0% |
| ! | AATTACATGGCTTATATGAA+AGG | - | chr4_3:68893787-68893806 | None:intergenic | 25.0% |
| ! | GAATCTCTAATCAAATTACA+TGG | - | chr4_3:68893800-68893819 | None:intergenic | 25.0% |
| !!! | ATTTTAACATCATGAAACTC+TGG | - | chr4_3:68894004-68894023 | None:intergenic | 25.0% |
| !!! | TGTTTTTGCAAAACTAAAGA+GGG | + | chr4_3:68894027-68894046 | Msa0658720:intron | 25.0% |
| ! | TGACATTTGAATAGACTTAA+GGG | + | chr4_3:68894056-68894075 | Msa0658720:intron | 25.0% |
| ! | TAAAATCTCTTTACAACACA+CGG | + | chr4_3:68894120-68894139 | Msa0658720:intron | 25.0% |
| !!! | CCTATTTTTCTTAGAATAGA+TGG | - | chr4_3:68894312-68894331 | None:intergenic | 25.0% |
| !! | CCATCTATTCTAAGAAAAAT+AGG | + | chr4_3:68894309-68894328 | Msa0658720:intron | 25.0% |
| ! | GGAATGAAATAAAAGGAAAA+GGG | - | chr4_3:68894576-68894595 | None:intergenic | 25.0% |
| ! | TGGAATGAAATAAAAGGAAA+AGG | - | chr4_3:68894577-68894596 | None:intergenic | 25.0% |
| !! | GAATATTCTTTTCTGTTGTT+AGG | + | chr4_3:68894800-68894819 | Msa0658720:intron | 25.0% |
| ! | TCAATTTATGCTGAAATTGA+TGG | + | chr4_3:68894852-68894871 | Msa0658720:CDS | 25.0% |
| !! | ATAAAAGAGAGTATATTGCA+TGG | - | chr4_3:68895121-68895140 | None:intergenic | 25.0% |
| ! | CAATTCGAAACACAAAATTA+GGG | - | chr4_3:68895154-68895173 | None:intergenic | 25.0% |
| !!! | TGCAGTTACAAATTTTGAAA+AGG | - | chr4_3:68895759-68895778 | None:intergenic | 25.0% |
| !! | TTTTATACTTAGATGTCTTC+TGG | + | chr4_3:68895874-68895893 | Msa0658720:intron | 25.0% |
| ! | TTTATACTTAGATGTCTTCT+GGG | + | chr4_3:68895875-68895894 | Msa0658720:intron | 25.0% |
| !! | TCTAATCAATGGTTTTCATT+AGG | + | chr4_3:68895905-68895924 | Msa0658720:intron | 25.0% |
| ! | AGACATAACAAAATTAAGCA+AGG | - | chr4_3:68896045-68896064 | None:intergenic | 25.0% |
| !!! | TGTTTTTGAGTAACAAAACA+TGG | - | chr4_3:68896240-68896259 | None:intergenic | 25.0% |
| !! | AATTTTACAAACTCTAATCC+AGG | + | chr4_3:68896537-68896556 | Msa0658720:intron | 25.0% |
| !! | ATTTTACAAACTCTAATCCA+GGG | + | chr4_3:68896538-68896557 | Msa0658720:intron | 25.0% |
| ! | CATGATTTACTCCATATAAA+GGG | + | chr4_3:68896580-68896599 | Msa0658720:intron | 25.0% |
| !!! | GTTTTGAAATTCCCTTTATA+TGG | - | chr4_3:68896594-68896613 | None:intergenic | 25.0% |
| ! | TAAAGGGAATTTCAAAACTT+TGG | + | chr4_3:68896596-68896615 | Msa0658720:intron | 25.0% |
| ! | AAAGGGAATTTCAAAACTTT+GGG | + | chr4_3:68896597-68896616 | Msa0658720:intron | 25.0% |
| !! | TTTCTCTTCTTCTAAAAGAT+AGG | - | chr4_3:68897013-68897032 | None:intergenic | 25.0% |
| ! | ATCAATTAGTTACCAAGATA+GGG | - | chr4_3:68897042-68897061 | None:intergenic | 25.0% |
| ! | TATCAATTAGTTACCAAGAT+AGG | - | chr4_3:68897043-68897062 | None:intergenic | 25.0% |
| !! | TATCTTGGTAACTAATTGAT+AGG | + | chr4_3:68897042-68897061 | Msa0658720:intron | 25.0% |
| !!! | TTTTCCTTAATTTTTTTGGG+TGG | + | chr4_3:68897344-68897363 | Msa0658720:intron | 25.0% |
| !! | TAAAAGTACAAGGATTAATC+AGG | - | chr4_3:68897650-68897669 | None:intergenic | 25.0% |
| !! | CTTTTATCCCATTTTCATTT+TGG | + | chr4_3:68897664-68897683 | Msa0658720:three_prime_UTR | 25.0% |
| ! | TCGACCAAAGACATAAATTT+TGG | + | chr4_3:68888689-68888708 | Msa0658720:CDS | 30.0% |
| ! | CGACCAAAGACATAAATTTT+GGG | + | chr4_3:68888690-68888709 | Msa0658720:CDS | 30.0% |
| AAGATGATGAGAACATGTTT+AGG | + | chr4_3:68888911-68888930 | Msa0658720:CDS | 30.0% | |
| ! | GTTTAGGTTTAACTATTCGA+AGG | + | chr4_3:68888927-68888946 | Msa0658720:CDS | 30.0% |
| TGTTAAAACTTCCAAGAAGA+TGG | + | chr4_3:68889011-68889030 | Msa0658720:CDS | 30.0% | |
| ! | ACATCATTTTCGTCAAAATC+AGG | - | chr4_3:68889459-68889478 | None:intergenic | 30.0% |
| !! | TGATTTTGACGAAAATGATG+TGG | + | chr4_3:68889458-68889477 | Msa0658720:CDS | 30.0% |
| GCTTTCAAAGTTGAGTAATT+TGG | - | chr4_3:68889603-68889622 | None:intergenic | 30.0% | |
| ! | TTATGATGTTTTCAACGCTT+TGG | + | chr4_3:68889707-68889726 | Msa0658720:CDS | 30.0% |
| ! | TGCTTCTGTAGTTCAAATTT+TGG | + | chr4_3:68889853-68889872 | Msa0658720:intron | 30.0% |
| CAAAACTTAAGGTCTAACAA+TGG | - | chr4_3:68889957-68889976 | None:intergenic | 30.0% | |
| !!! | AATTTTGATTTCCTTCTCAG+AGG | + | chr4_3:68889996-68890015 | Msa0658720:intron | 30.0% |
| TTACGAGAGAACAATCAAAT+TGG | - | chr4_3:68890282-68890301 | None:intergenic | 30.0% | |
| !! | TGATTTTGTGCACGTTTTTT+TGG | - | chr4_3:68890401-68890420 | None:intergenic | 30.0% |
| CCGACCTTAGTATTTAAAAA+AGG | - | chr4_3:68890437-68890456 | None:intergenic | 30.0% | |
| ATTAAGCAGATTAGAAGAAG+AGG | - | chr4_3:68890504-68890523 | None:intergenic | 30.0% | |
| CAAGAGAAAACAAATTACTG+AGG | - | chr4_3:68890963-68890982 | None:intergenic | 30.0% | |
| !! | TTGATGTTGAATTCTAGCTT+AGG | + | chr4_3:68891009-68891028 | Msa0658720:intron | 30.0% |
| !! | TGATGTTGAATTCTAGCTTA+GGG | + | chr4_3:68891010-68891029 | Msa0658720:intron | 30.0% |
| GAGGGATTTCAGAAAAATAA+AGG | + | chr4_3:68891046-68891065 | Msa0658720:intron | 30.0% | |
| TCAATAATCGTTGTGCATTA+TGG | + | chr4_3:68891101-68891120 | Msa0658720:intron | 30.0% | |
| TTAATTGACGTGACAATCAT+TGG | + | chr4_3:68891241-68891260 | Msa0658720:intron | 30.0% | |
| AATCATTGGATGCATGATTA+TGG | + | chr4_3:68891255-68891274 | Msa0658720:intron | 30.0% | |
| ! | TGATTATGGTGTTAGATTAG+AGG | + | chr4_3:68891269-68891288 | Msa0658720:intron | 30.0% |
| TCCAATCTAGTACTTAATCA+TGG | - | chr4_3:68891351-68891370 | None:intergenic | 30.0% | |
| ACTAGATTGGATTAACTTCT+AGG | + | chr4_3:68891360-68891379 | Msa0658720:intron | 30.0% | |
| ! | GTTTGGAAAGAAAAGCTTTT+CGG | + | chr4_3:68891638-68891657 | Msa0658720:intron | 30.0% |
| ! | TACGTATTTTCTTCGCTATA+AGG | + | chr4_3:68891744-68891763 | Msa0658720:intron | 30.0% |
| ! | CAAACGAAGGATTTAGAATT+AGG | - | chr4_3:68891803-68891822 | None:intergenic | 30.0% |
| CGATGTTAAATTTCAAACGA+AGG | - | chr4_3:68891816-68891835 | None:intergenic | 30.0% | |
| TTTCCCTTATTGATCATGTT+AGG | + | chr4_3:68891847-68891866 | Msa0658720:intron | 30.0% | |
| ATCTCTGGTAATTAGTAAGT+TGG | - | chr4_3:68891900-68891919 | None:intergenic | 30.0% | |
| TGATCCTCTTTATTCTTTGA+TGG | + | chr4_3:68891957-68891976 | Msa0658720:intron | 30.0% | |
| ATGAATAATCTGTATGCTGA+GGG | + | chr4_3:68892056-68892075 | Msa0658720:intron | 30.0% | |
| ! | TTCATGTCTAATTTTGTGAC+TGG | + | chr4_3:68892139-68892158 | Msa0658720:intron | 30.0% |
| TATTGAATTGAATACCTGTC+TGG | - | chr4_3:68892366-68892385 | None:intergenic | 30.0% | |
| CTATACAATGTTTCATTCAG+AGG | + | chr4_3:68892417-68892436 | Msa0658720:intron | 30.0% | |
| AAAAGAACAGTTTACGTGTA+TGG | - | chr4_3:68893017-68893036 | None:intergenic | 30.0% | |
| !!! | GCTTCTCCTTAATTTTTTCT+AGG | - | chr4_3:68893041-68893060 | None:intergenic | 30.0% |
| ATCGATCAAAAGTCAATACT+TGG | + | chr4_3:68893116-68893135 | Msa0658720:intron | 30.0% | |
| TCGATCAAAAGTCAATACTT+GGG | + | chr4_3:68893117-68893136 | Msa0658720:intron | 30.0% | |
| ATTTCACTAGTGATGTGATT+CGG | + | chr4_3:68893327-68893346 | Msa0658720:intron | 30.0% | |
| ! | GTTTTATAGAAATCTAAGGG+AGG | - | chr4_3:68893437-68893456 | None:intergenic | 30.0% |
| ! | ATGAAAGTGTGAATGAAAGT+GGG | - | chr4_3:68893601-68893620 | None:intergenic | 30.0% |
| !!! | TTATTGTTTTGAACCTTCTG+TGG | + | chr4_3:68893684-68893703 | Msa0658720:intron | 30.0% |
| ACTGCTTTAGTAACAATGTT+TGG | + | chr4_3:68893849-68893868 | Msa0658720:intron | 30.0% | |
| !! | GTGTTTTTGCAAAACTAAAG+AGG | + | chr4_3:68894026-68894045 | Msa0658720:intron | 30.0% |
| GTGACATTTGAATAGACTTA+AGG | + | chr4_3:68894055-68894074 | Msa0658720:intron | 30.0% | |
| ATTTGAATAGACTTAAGGGT+AGG | + | chr4_3:68894060-68894079 | Msa0658720:intron | 30.0% | |
| ! | TTTGTGTTGAAGTTTAGAGT+GGG | - | chr4_3:68894155-68894174 | None:intergenic | 30.0% |
| ATTTGTGTTGAAGTTTAGAG+TGG | - | chr4_3:68894156-68894175 | None:intergenic | 30.0% | |
| !! | ATCTATTTAGTTCTAAGACG+TGG | - | chr4_3:68894187-68894206 | None:intergenic | 30.0% |
| !!! | GTCTTTTCTAGGTTTTGAAT+TGG | + | chr4_3:68894221-68894240 | Msa0658720:intron | 30.0% |
| ! | TTACTTGCCAACTTTTTAGA+TGG | + | chr4_3:68894249-68894268 | Msa0658720:intron | 30.0% |
| ! | TACTTGCCAACTTTTTAGAT+GGG | + | chr4_3:68894250-68894269 | Msa0658720:intron | 30.0% |
| TTCTTAGAATAGATGGAAGA+GGG | - | chr4_3:68894305-68894324 | None:intergenic | 30.0% | |
| TTTCTTAGAATAGATGGAAG+AGG | - | chr4_3:68894306-68894325 | None:intergenic | 30.0% | |
| !! | TTGACAAGTTGGTATAAAGA+AGG | + | chr4_3:68894404-68894423 | Msa0658720:intron | 30.0% |
| !! | AAGGAAAAGTATCTACAAGT+TGG | + | chr4_3:68894423-68894442 | Msa0658720:intron | 30.0% |
| GATAGTAGCAATTCAGATTT+GGG | + | chr4_3:68894445-68894464 | Msa0658720:intron | 30.0% | |
| ATGACTTATGCTGTATATCT+TGG | + | chr4_3:68894530-68894549 | Msa0658720:intron | 30.0% | |
| ! | TTATGCTGAAATTGATGGTA+AGG | + | chr4_3:68894857-68894876 | Msa0658720:CDS | 30.0% |
| ! | AGAATCTATGATTTGTACCT+CGG | + | chr4_3:68895018-68895037 | Msa0658720:CDS | 30.0% |
| TATTATCTTGATATTACCCG+AGG | - | chr4_3:68895038-68895057 | None:intergenic | 30.0% | |
| CCAATTCGAAACACAAAATT+AGG | - | chr4_3:68895155-68895174 | None:intergenic | 30.0% | |
| ! | CCTAATTTTGTGTTTCGAAT+TGG | + | chr4_3:68895152-68895171 | Msa0658720:intron | 30.0% |
| ATTATAAGGGGCTAAAACAA+AGG | - | chr4_3:68895218-68895237 | None:intergenic | 30.0% | |
| !!! | TGTTTTAGCTCCATAGTATT+TGG | + | chr4_3:68895251-68895270 | Msa0658720:intron | 30.0% |
| ATTAGTGTCTGCATGAAAAA+AGG | + | chr4_3:68895290-68895309 | Msa0658720:intron | 30.0% | |
| !!! | GTGCTCCTTACTTATTTTAT+TGG | + | chr4_3:68895379-68895398 | Msa0658720:intron | 30.0% |
| TCTCATAGAATAAGATTTGC+AGG | + | chr4_3:68895463-68895482 | Msa0658720:intron | 30.0% | |
| !! | AATTTTGGAGAGCAAAACAA+TGG | - | chr4_3:68895794-68895813 | None:intergenic | 30.0% |
| TTAACTGGTTATTAACAGTG+TGG | + | chr4_3:68895840-68895859 | Msa0658720:intron | 30.0% | |
| TAACTGGTTATTAACAGTGT+GGG | + | chr4_3:68895841-68895860 | Msa0658720:intron | 30.0% | |
| TTATACTTAGATGTCTTCTG+GGG | + | chr4_3:68895876-68895895 | Msa0658720:intron | 30.0% | |
| ! | TGGTTTTCATTAGGATTCAA+AGG | + | chr4_3:68895914-68895933 | Msa0658720:intron | 30.0% |
| TTCATTAGGATTCAAAGGTT+CGG | + | chr4_3:68895919-68895938 | Msa0658720:intron | 30.0% | |
| TACCATTGCTCTTATGATAT+GGG | + | chr4_3:68895965-68895984 | Msa0658720:intron | 30.0% | |
| TAAATCCCATATGCATACTT+TGG | + | chr4_3:68896292-68896311 | Msa0658720:intron | 30.0% | |
| ! | TTTTGCCAAAGTATGCATAT+GGG | - | chr4_3:68896300-68896319 | None:intergenic | 30.0% |
| ! | TTTTTGCCAAAGTATGCATA+TGG | - | chr4_3:68896301-68896320 | None:intergenic | 30.0% |
| ! | TTTTACAAACTCTAATCCAG+GGG | + | chr4_3:68896539-68896558 | Msa0658720:intron | 30.0% |
| GCATGATTTACTCCATATAA+AGG | + | chr4_3:68896579-68896598 | Msa0658720:intron | 30.0% | |
| AAGGGAATTTCAAAACTTTG+GGG | + | chr4_3:68896598-68896617 | Msa0658720:intron | 30.0% | |
| AAACAAGAGACAAGAATATC+TGG | - | chr4_3:68896708-68896727 | None:intergenic | 30.0% | |
| !!! | TTCTTGCCTACTTTTTAGTT+CGG | + | chr4_3:68897263-68897282 | Msa0658720:intron | 30.0% |
| AATTCCAACTTTCTGACTAT+TGG | - | chr4_3:68897307-68897326 | None:intergenic | 30.0% | |
| AATAGTCAGAAAGTTGGAAT+TGG | + | chr4_3:68897306-68897325 | Msa0658720:intron | 30.0% | |
| !!! | TTAATTTTTTTGGGTGGCTA+GGG | + | chr4_3:68897350-68897369 | Msa0658720:intron | 30.0% |
| !!! | AGTATCATCTGGTTTTCTAT+TGG | + | chr4_3:68897418-68897437 | Msa0658720:three_prime_UTR | 30.0% |
| CAATAATCAGGACTATTTCA+TGG | - | chr4_3:68897595-68897614 | None:intergenic | 30.0% | |
| ! | GAAAATGGGATAAAAGTACA+AGG | - | chr4_3:68897660-68897679 | None:intergenic | 30.0% |
| ! | TCCTGTTTTACCTCAGATAA+GGG | - | chr4_3:68888790-68888809 | None:intergenic | 35.0% |
| ! | TTCCTGTTTTACCTCAGATA+AGG | - | chr4_3:68888791-68888810 | None:intergenic | 35.0% |
| TATAAAGGCAACCATCTTCT+TGG | - | chr4_3:68889025-68889044 | None:intergenic | 35.0% | |
| AAGATGGTTGCCTTTATAAC+AGG | + | chr4_3:68889027-68889046 | Msa0658720:CDS | 35.0% | |
| CCATATTAACAACCTCATCA+CGG | - | chr4_3:68889074-68889093 | None:intergenic | 35.0% | |
| ! | CCGACATCAATTAGTTTCTT+GGG | - | chr4_3:68889276-68889295 | None:intergenic | 35.0% |
| CCCAAGAAACTAATTGATGT+CGG | + | chr4_3:68889273-68889292 | Msa0658720:CDS | 35.0% | |
| ! | ACCGACATCAATTAGTTTCT+TGG | - | chr4_3:68889277-68889296 | None:intergenic | 35.0% |
| !! | TAATTGATGTCGGTTTCTCT+CGG | + | chr4_3:68889283-68889302 | Msa0658720:CDS | 35.0% |
| ATTTCCATCTTTCTAAACCC+TGG | - | chr4_3:68889375-68889394 | None:intergenic | 35.0% | |
| GAATGTTGTCGATAGTTATC+TGG | + | chr4_3:68889503-68889522 | Msa0658720:CDS | 35.0% | |
| GCAAAATGAAAGCTTCTTGA+AGG | + | chr4_3:68889737-68889756 | Msa0658720:CDS | 35.0% | |
| TTCTTGAAGGAACTGAAGTT+TGG | + | chr4_3:68889750-68889769 | Msa0658720:CDS | 35.0% | |
| TAATGAAGTTTACCATCACC+TGG | - | chr4_3:68889777-68889796 | None:intergenic | 35.0% | |
| ATCTCTACAACTATCGAGTA+AGG | + | chr4_3:68889799-68889818 | Msa0658720:CDS | 35.0% | |
| ! | TTGTGCTGATAGACTTTGTA+TGG | + | chr4_3:68889912-68889931 | Msa0658720:intron | 35.0% |
| TTGTATGGTTGCATATGATG+TGG | + | chr4_3:68889927-68889946 | Msa0658720:intron | 35.0% | |
| CAAAAATAGCGAACAGGAAT+TGG | - | chr4_3:68890068-68890087 | None:intergenic | 35.0% | |
| CATGAACAAAAATAGCGAAC+AGG | - | chr4_3:68890074-68890093 | None:intergenic | 35.0% | |
| CATCTTGAGTTTCCATTTGA+AGG | - | chr4_3:68890216-68890235 | None:intergenic | 35.0% | |
| TTAAATACTAAGGTCGGATC+AGG | + | chr4_3:68890440-68890459 | Msa0658720:intron | 35.0% | |
| !! | GTTCAATTGATGATGCGTTT+CGG | - | chr4_3:68890702-68890721 | None:intergenic | 35.0% |
| AAACGCATCATCAATTGAAC+AGG | + | chr4_3:68890702-68890721 | Msa0658720:intron | 35.0% | |
| AACGCATCATCAATTGAACA+GGG | + | chr4_3:68890703-68890722 | Msa0658720:intron | 35.0% | |
| !!! | ATTTTCTAGCTCTAGGGTTT+CGG | - | chr4_3:68890766-68890785 | None:intergenic | 35.0% |
| !!! | TGATCGATTTTCTAGCTCTA+GGG | - | chr4_3:68890772-68890791 | None:intergenic | 35.0% |
| !!! | TTGATCGATTTTCTAGCTCT+AGG | - | chr4_3:68890773-68890792 | None:intergenic | 35.0% |
| ! | GAAACAGATTGACTTATAGG+AGG | - | chr4_3:68890896-68890915 | None:intergenic | 35.0% |
| ! | TCGGAAACAGATTGACTTAT+AGG | - | chr4_3:68890899-68890918 | None:intergenic | 35.0% |
| !! | TTAGGGTTTTGTAATGTGTG+AGG | + | chr4_3:68891027-68891046 | Msa0658720:intron | 35.0% |
| !! | TAGGGTTTTGTAATGTGTGA+GGG | + | chr4_3:68891028-68891047 | Msa0658720:intron | 35.0% |
| CTAATCATTGTGCTAGGTAT+TGG | + | chr4_3:68891292-68891311 | Msa0658720:intron | 35.0% | |
| GCCATGATTAAGTACTAGAT+TGG | + | chr4_3:68891347-68891366 | Msa0658720:intron | 35.0% | |
| TTGGATTAACTTCTAGGTTG+TGG | + | chr4_3:68891366-68891385 | Msa0658720:intron | 35.0% | |
| TGGATTAACTTCTAGGTTGT+GGG | + | chr4_3:68891367-68891386 | Msa0658720:intron | 35.0% | |
| ! | TCCATATTCACTTGTTGAGA+AGG | + | chr4_3:68891545-68891564 | Msa0658720:intron | 35.0% |
| ACCTTCTCAACAAGTGAATA+TGG | - | chr4_3:68891549-68891568 | None:intergenic | 35.0% | |
| ATTAGAAATGAGGCTGCAAT+TGG | + | chr4_3:68891610-68891629 | Msa0658720:intron | 35.0% | |
| TGGCCTAACATGATCAATAA+GGG | - | chr4_3:68891853-68891872 | None:intergenic | 35.0% | |
| TTGGCCTAACATGATCAATA+AGG | - | chr4_3:68891854-68891873 | None:intergenic | 35.0% | |
| TTATTGATCATGTTAGGCCA+AGG | + | chr4_3:68891853-68891872 | Msa0658720:intron | 35.0% | |
| TAATTACCAGAGATATCGAG+TGG | + | chr4_3:68891906-68891925 | Msa0658720:CDS | 35.0% | |
| AATTACCAGAGATATCGAGT+GGG | + | chr4_3:68891907-68891926 | Msa0658720:CDS | 35.0% | |
| TCTTGTATTGGGATTTGAAC+AGG | + | chr4_3:68891934-68891953 | Msa0658720:CDS | 35.0% | |
| GATGAATAATCTGTATGCTG+AGG | + | chr4_3:68892055-68892074 | Msa0658720:intron | 35.0% | |
| CTGGTTGTATAATGCATTGT+AGG | + | chr4_3:68892158-68892177 | Msa0658720:intron | 35.0% | |
| GCATTGTAGGAAAATCGTTA+TGG | + | chr4_3:68892171-68892190 | Msa0658720:intron | 35.0% | |
| GCAAGGACATTATAAGTAGA+TGG | - | chr4_3:68892266-68892285 | None:intergenic | 35.0% | |
| TCATTATTAGGAGCTATGCA+AGG | - | chr4_3:68892283-68892302 | None:intergenic | 35.0% | |
| TGCATAGCTCCTAATAATGA+TGG | + | chr4_3:68892283-68892302 | Msa0658720:intron | 35.0% | |
| TGTTCACGAATTAAACCTAC+AGG | - | chr4_3:68892329-68892348 | None:intergenic | 35.0% | |
| TACAATGTTTCATTCAGAGG+AGG | + | chr4_3:68892420-68892439 | Msa0658720:intron | 35.0% | |
| !!! | TAGCCATTTTTTTTACGAGG+GGG | - | chr4_3:68892846-68892865 | None:intergenic | 35.0% |
| !!! | CTAGCCATTTTTTTTACGAG+GGG | - | chr4_3:68892847-68892866 | None:intergenic | 35.0% |
| !!! | GCTAGCCATTTTTTTTACGA+GGG | - | chr4_3:68892848-68892867 | None:intergenic | 35.0% |
| !!! | AGCTAGCCATTTTTTTTACG+AGG | - | chr4_3:68892849-68892868 | None:intergenic | 35.0% |
| ATTGCAAAACGATGGTGAAA+TGG | - | chr4_3:68892923-68892942 | None:intergenic | 35.0% | |
| TTTGTTGGATTGCAAAACGA+TGG | - | chr4_3:68892931-68892950 | None:intergenic | 35.0% | |
| !!! | AGCAAGCATCTAGTTTTTGT+TGG | - | chr4_3:68892946-68892965 | None:intergenic | 35.0% |
| !! | CATTAGCTTGAGAAGTTTTG+GGG | - | chr4_3:68893196-68893215 | None:intergenic | 35.0% |
| !! | CCATTAGCTTGAGAAGTTTT+GGG | - | chr4_3:68893197-68893216 | None:intergenic | 35.0% |
| CCAAAACTTCTCAAGCTAAT+GGG | + | chr4_3:68893195-68893214 | Msa0658720:intron | 35.0% | |
| ! | GTAGGAAACAGTATTGAATC+AGG | + | chr4_3:68893231-68893250 | Msa0658720:intron | 35.0% |
| AACATAAGATCTATACCGGA+AGG | - | chr4_3:68893285-68893304 | None:intergenic | 35.0% | |
| ! | TGAAAGTGTGAATGAAAGTG+GGG | - | chr4_3:68893600-68893619 | None:intergenic | 35.0% |
| ! | GATGAAAGTGTGAATGAAAG+TGG | - | chr4_3:68893602-68893621 | None:intergenic | 35.0% |
| TCATTCACACTTTCATCTCA+AGG | + | chr4_3:68893605-68893624 | Msa0658720:intron | 35.0% | |
| TTAGGGAAATAAGATCTGCA+AGG | - | chr4_3:68893646-68893665 | None:intergenic | 35.0% | |
| CTCATGCGAAATGAATTTCA+TGG | - | chr4_3:68893722-68893741 | None:intergenic | 35.0% | |
| TGAAATTCATTTCGCATGAG+AGG | + | chr4_3:68893722-68893741 | Msa0658720:intron | 35.0% | |
| ! | TTTTTCACGAACTGAGTTTG+TGG | - | chr4_3:68893888-68893907 | None:intergenic | 35.0% |
| AGTTCGTGAAAAATGAGCTA+GGG | + | chr4_3:68893895-68893914 | Msa0658720:intron | 35.0% | |
| ATATCCTGTGCAAGATTCTA+CGG | - | chr4_3:68894385-68894404 | None:intergenic | 35.0% | |
| GGATAGTAGCAATTCAGATT+TGG | + | chr4_3:68894444-68894463 | Msa0658720:intron | 35.0% | |
| CACCACTGAATAACATACAT+CGG | - | chr4_3:68894493-68894512 | None:intergenic | 35.0% | |
| TGCAGCAAGAAAGGAAAAAA+TGG | - | chr4_3:68894597-68894616 | None:intergenic | 35.0% | |
| TCAGTTATGTGTGCAACAAA+AGG | - | chr4_3:68894639-68894658 | None:intergenic | 35.0% | |
| !!! | TGTACTGCTGTTTTAACACA+TGG | + | chr4_3:68894702-68894721 | Msa0658720:intron | 35.0% |
| TTTAACACATGGCTATCATC+AGG | + | chr4_3:68894713-68894732 | Msa0658720:intron | 35.0% | |
| TTATGTCAAACCCTCTCTTT+AGG | + | chr4_3:68894957-68894976 | Msa0658720:intron | 35.0% | |
| ! | AAACCCTCTCTTTAGGAAAT+TGG | + | chr4_3:68894964-68894983 | Msa0658720:intron | 35.0% |
| ACTCCAATTTCCTAAAGAGA+GGG | - | chr4_3:68894970-68894989 | None:intergenic | 35.0% | |
| TACTCCAATTTCCTAAAGAG+AGG | - | chr4_3:68894971-68894990 | None:intergenic | 35.0% | |
| ! | GAATCTATGATTTGTACCTC+GGG | + | chr4_3:68895019-68895038 | Msa0658720:CDS | 35.0% |
| CGGTCATAAACCAAATACTA+TGG | - | chr4_3:68895264-68895283 | None:intergenic | 35.0% | |
| ATGCAGACACTAATTGAACA+CGG | - | chr4_3:68895284-68895303 | None:intergenic | 35.0% | |
| TTGCTCAAATAGATCGTGAT+TGG | + | chr4_3:68895565-68895584 | Msa0658720:CDS | 35.0% | |
| TCAAATAGATCGTGATTGGA+GGG | + | chr4_3:68895569-68895588 | Msa0658720:CDS | 35.0% | |
| AACTGGTTATTAACAGTGTG+GGG | + | chr4_3:68895842-68895861 | Msa0658720:intron | 35.0% | |
| TATACTTAGATGTCTTCTGG+GGG | + | chr4_3:68895877-68895896 | Msa0658720:intron | 35.0% | |
| GTACCATTGCTCTTATGATA+TGG | + | chr4_3:68895964-68895983 | Msa0658720:intron | 35.0% | |
| ACCATTGCTCTTATGATATG+GGG | + | chr4_3:68895966-68895985 | Msa0658720:intron | 35.0% | |
| ACTCATCCAAATATGCTACA+AGG | - | chr4_3:68896095-68896114 | None:intergenic | 35.0% | |
| !! | TCAAAACTTTGGGGTTAGTT+CGG | + | chr4_3:68896607-68896626 | Msa0658720:intron | 35.0% |
| GATATGAGACACAGAGTTAA+AGG | - | chr4_3:68896751-68896770 | None:intergenic | 35.0% | |
| GTAAAATGACTCAGCAACAA+TGG | - | chr4_3:68896797-68896816 | None:intergenic | 35.0% | |
| AATGACTACTTCTCAAGACA+TGG | + | chr4_3:68897158-68897177 | Msa0658720:CDS | 35.0% | |
| ! | TCTTGAGAAACTTTTGACCT+AGG | + | chr4_3:68897224-68897243 | Msa0658720:intron | 35.0% |
| AGAGAACCGAACTAAAAAGT+AGG | - | chr4_3:68897272-68897291 | None:intergenic | 35.0% | |
| CTAGCCACCCAAAAAAATTA+AGG | - | chr4_3:68897351-68897370 | None:intergenic | 35.0% | |
| !!! | CTTAATTTTTTTGGGTGGCT+AGG | + | chr4_3:68897349-68897368 | Msa0658720:intron | 35.0% |
| !!! | TAATTTTTTTGGGTGGCTAG+GGG | + | chr4_3:68897351-68897370 | Msa0658720:intron | 35.0% |
| ATTTGACAGACAGTATCATC+TGG | + | chr4_3:68897407-68897426 | Msa0658720:three_prime_UTR | 35.0% | |
| AGTCCTGATTATTGCTTTGT+TGG | + | chr4_3:68897601-68897620 | Msa0658720:three_prime_UTR | 35.0% | |
| CAACCAACAAAGCAATAATC+AGG | - | chr4_3:68897607-68897626 | None:intergenic | 35.0% | |
| ! | CTGATTATTGCTTTGTTGGT+TGG | + | chr4_3:68897605-68897624 | Msa0658720:three_prime_UTR | 35.0% |
| !! | TTGGGATTTTGAGTCTCTTC+AGG | - | chr4_3:68888592-68888611 | None:intergenic | 40.0% |
| AATGCAAGATCACTTTCAGC+AGG | - | chr4_3:68888631-68888650 | None:intergenic | 40.0% | |
| TGCTGAAAGTGATCTTGCAT+TGG | + | chr4_3:68888630-68888649 | Msa0658720:CDS | 40.0% | |
| !! | TTTTGGGAAACTCAACCTGT+TGG | + | chr4_3:68888706-68888725 | Msa0658720:CDS | 40.0% |
| TTTGGGAAACTCAACCTGTT+GGG | + | chr4_3:68888707-68888726 | Msa0658720:CDS | 40.0% | |
| TTGGGCAGTTCAAGGATATA+GGG | + | chr4_3:68888725-68888744 | Msa0658720:CDS | 40.0% | |
| ! | CTGTTTTACCTCAGATAAGG+GGG | - | chr4_3:68888788-68888807 | None:intergenic | 40.0% |
| ! | CCTGTTTTACCTCAGATAAG+GGG | - | chr4_3:68888789-68888808 | None:intergenic | 40.0% |
| TAGAGGTTAGGAAGGTTGTA+TGG | - | chr4_3:68888814-68888833 | None:intergenic | 40.0% | |
| ACCTTCCTAACCTCTATGAA+TGG | + | chr4_3:68888818-68888837 | Msa0658720:CDS | 40.0% | |
| CCTTCCTAACCTCTATGAAT+GGG | + | chr4_3:68888819-68888838 | Msa0658720:CDS | 40.0% | |
| GTAACCCATTCATAGAGGTT+AGG | - | chr4_3:68888826-68888845 | None:intergenic | 40.0% | |
| CACAAGTAACCCATTCATAG+AGG | - | chr4_3:68888831-68888850 | None:intergenic | 40.0% | |
| TACTTCACAGCTTGGCATAT+TGG | + | chr4_3:68888982-68889001 | Msa0658720:CDS | 40.0% | |
| CCGTGATGAGGTTGTTAATA+TGG | + | chr4_3:68889071-68889090 | Msa0658720:CDS | 40.0% | |
| TCAAAGATCTGTGCCAGTAT+TGG | - | chr4_3:68889251-68889270 | None:intergenic | 40.0% | |
| GGAAATTCATGATGTTCCTG+CGG | + | chr4_3:68889389-68889408 | Msa0658720:CDS | 40.0% | |
| ACGAAAATGATGTGGAGCAT+TGG | + | chr4_3:68889466-68889485 | Msa0658720:CDS | 40.0% | |
| ACACTTCCTTCTAGTATCCT+TGG | + | chr4_3:68889573-68889592 | Msa0658720:CDS | 40.0% | |
| !! | TTGAGTAATTTGGGTTGCCA+AGG | - | chr4_3:68889593-68889612 | None:intergenic | 40.0% |
| ATTCATCAGCTGAAGCAAAG+GGG | - | chr4_3:68889658-68889677 | None:intergenic | 40.0% | |
| CATTCATCAGCTGAAGCAAA+GGG | - | chr4_3:68889659-68889678 | None:intergenic | 40.0% | |
| TCATTCATCAGCTGAAGCAA+AGG | - | chr4_3:68889660-68889679 | None:intergenic | 40.0% | |
| CATTGAAGTCATCAGAGCTT+GGG | + | chr4_3:68889826-68889845 | Msa0658720:CDS | 40.0% | |
| TGCATAAGTGGTTGAACTTG+AGG | + | chr4_3:68890039-68890058 | Msa0658720:intron | 40.0% | |
| GTTTCCATTTGAAGGAGTGA+AGG | - | chr4_3:68890208-68890227 | None:intergenic | 40.0% | |
| !!! | GGACTTTTTCGTCAAACTCT+GGG | + | chr4_3:68890724-68890743 | Msa0658720:CDS | 40.0% |
| AGAAAATCGATCAAATGCCG+AGG | + | chr4_3:68890779-68890798 | Msa0658720:CDS | 40.0% | |
| TAGGATCAAGATCAAGACCT+CGG | - | chr4_3:68890799-68890818 | None:intergenic | 40.0% | |
| GTCTTGATCTTGATCCTAGA+TGG | + | chr4_3:68890801-68890820 | Msa0658720:CDS | 40.0% | |
| GATGAAGCAGAAAACCATCT+AGG | - | chr4_3:68890818-68890837 | None:intergenic | 40.0% | |
| TGTCACCAGTAAACCTAAAC+CGG | + | chr4_3:68890859-68890878 | Msa0658720:CDS | 40.0% | |
| ! | CAAAACCGGTTTAGGTTTAC+TGG | - | chr4_3:68890867-68890886 | None:intergenic | 40.0% |
| ATAGGAGGTTGCTTCAAAAC+CGG | - | chr4_3:68890881-68890900 | None:intergenic | 40.0% | |
| ! | TGTTTCCGAATTTTCGAAGC+CGG | + | chr4_3:68890910-68890929 | Msa0658720:CDS | 40.0% |
| AGATTCCGGCTTCGAAAATT+CGG | - | chr4_3:68890918-68890937 | None:intergenic | 40.0% | |
| GACACAAATTTCACCTCTTC+GGG | - | chr4_3:68890941-68890960 | None:intergenic | 40.0% | |
| GGACACAAATTTCACCTCTT+CGG | - | chr4_3:68890942-68890961 | None:intergenic | 40.0% | |
| TAGAGGCTAATCATTGTGCT+AGG | + | chr4_3:68891286-68891305 | Msa0658720:intron | 40.0% | |
| !! | GTGCTAGGTATTGGTATATC+AGG | + | chr4_3:68891301-68891320 | Msa0658720:intron | 40.0% |
| ! | TCTAGGTTGTGGGAGTTTTT+CGG | + | chr4_3:68891377-68891396 | Msa0658720:intron | 40.0% |
| ! | GGTAATTAGTAAGTTGGACC+TGG | - | chr4_3:68891894-68891913 | None:intergenic | 40.0% |
| GAGTGGGCAAATCTTGTATT+GGG | + | chr4_3:68891923-68891942 | Msa0658720:CDS | 40.0% | |
| CCAGCCATCAAAGAATAAAG+AGG | - | chr4_3:68891964-68891983 | None:intergenic | 40.0% | |
| ! | CCTCTTTATTCTTTGATGGC+TGG | + | chr4_3:68891961-68891980 | Msa0658720:intron | 40.0% |
| CAAGGTCGACCATCATTATT+AGG | - | chr4_3:68892295-68892314 | None:intergenic | 40.0% | |
| ! | TGAATACCTGTCTGGTAATG+AGG | - | chr4_3:68892358-68892377 | None:intergenic | 40.0% |
| ACGATCATAAATGAAACCCG+TGG | - | chr4_3:68892875-68892894 | None:intergenic | 40.0% | |
| CTCATTAGTAGTGTGTCGTA+AGG | + | chr4_3:68893142-68893161 | Msa0658720:intron | 40.0% | |
| CCCAAAACTTCTCAAGCTAA+TGG | + | chr4_3:68893194-68893213 | Msa0658720:intron | 40.0% | |
| !! | CCCATTAGCTTGAGAAGTTT+TGG | - | chr4_3:68893198-68893217 | None:intergenic | 40.0% |
| ! | GACATTTGCTAATCACCTTC+CGG | + | chr4_3:68893267-68893286 | Msa0658720:intron | 40.0% |
| AAAACTACAGGGGCTATTTG+TGG | - | chr4_3:68893459-68893478 | None:intergenic | 40.0% | |
| CAGTTCGTGAAAAATGAGCT+AGG | + | chr4_3:68893894-68893913 | Msa0658720:intron | 40.0% | |
| GTTCGTGAAAAATGAGCTAG+GGG | + | chr4_3:68893896-68893915 | Msa0658720:intron | 40.0% | |
| ATCTGTCCTCCAAAGAAACA+GGG | - | chr4_3:68893929-68893948 | None:intergenic | 40.0% | |
| TATCTGTCCTCCAAAGAAAC+AGG | - | chr4_3:68893930-68893949 | None:intergenic | 40.0% | |
| TGAATAGACTTAAGGGTAGG+TGG | + | chr4_3:68894063-68894082 | Msa0658720:intron | 40.0% | |
| GAATAGACTTAAGGGTAGGT+GGG | + | chr4_3:68894064-68894083 | Msa0658720:intron | 40.0% | |
| ATGACGCCCATCTAAAAAGT+TGG | - | chr4_3:68894259-68894278 | None:intergenic | 40.0% | |
| TAAGAAAAATAGGCGACACG+CGG | + | chr4_3:68894319-68894338 | Msa0658720:intron | 40.0% | |
| TATCCTGTGCAAGATTCTAC+GGG | - | chr4_3:68894384-68894403 | None:intergenic | 40.0% | |
| TGCACAGGATATTGACAAGT+TGG | + | chr4_3:68894393-68894412 | Msa0658720:intron | 40.0% | |
| TTCAGTGGTGAATTCAGCAA+TGG | + | chr4_3:68894503-68894522 | Msa0658720:intron | 40.0% | |
| TGCACACATAACTGATGCTA+TGG | + | chr4_3:68894644-68894663 | Msa0658720:CDS | 40.0% | |
| GCACACATAACTGATGCTAT+GGG | + | chr4_3:68894645-68894664 | Msa0658720:CDS | 40.0% | |
| CACACATAACTGATGCTATG+GGG | + | chr4_3:68894646-68894665 | Msa0658720:CDS | 40.0% | |
| TATGGGGAATGAGCTCTTTA+GGG | + | chr4_3:68894662-68894681 | Msa0658720:CDS | 40.0% | |
| GGATTTGCAGTAGTGTCATA+AGG | + | chr4_3:68894734-68894753 | Msa0658720:intron | 40.0% | |
| TTATCCACCAAAAGGGTCTA+CGG | - | chr4_3:68894827-68894846 | None:intergenic | 40.0% | |
| !! | GAGCTTGTTATCCACCAAAA+GGG | - | chr4_3:68894834-68894853 | None:intergenic | 40.0% |
| !! | TGAGCTTGTTATCCACCAAA+AGG | - | chr4_3:68894835-68894854 | None:intergenic | 40.0% |
| AGGAAATTGGAGTAGTTCAC+AGG | + | chr4_3:68894977-68894996 | Msa0658720:intron | 40.0% | |
| AAATTGGAGTAGTTCACAGG+CGG | + | chr4_3:68894980-68894999 | Msa0658720:CDS | 40.0% | |
| TTGCAGGAATCAGCAATTTG+CGG | + | chr4_3:68895479-68895498 | Msa0658720:intron | 40.0% | |
| TTCACCTTGAAAGATGCTGA+TGG | + | chr4_3:68895534-68895553 | Msa0658720:CDS | 40.0% | |
| CTCAAATAGATCGTGATTGG+AGG | + | chr4_3:68895568-68895587 | Msa0658720:CDS | 40.0% | |
| CAAATAGATCGTGATTGGAG+GGG | + | chr4_3:68895570-68895589 | Msa0658720:CDS | 40.0% | |
| TGGGGGATTGATCTAATCAA+TGG | + | chr4_3:68895894-68895913 | Msa0658720:intron | 40.0% | |
| CCATTGCTCTTATGATATGG+GGG | + | chr4_3:68895967-68895986 | Msa0658720:intron | 40.0% | |
| CATTGCTCTTATGATATGGG+GGG | + | chr4_3:68895968-68895987 | Msa0658720:intron | 40.0% | |
| GGATGAGTGATGATAGAATC+TGG | + | chr4_3:68896107-68896126 | Msa0658720:intron | 40.0% | |
| GGATTAGAGTTGTGTGTGTT+TGG | + | chr4_3:68896154-68896173 | Msa0658720:intron | 40.0% | |
| TCAAAACAAATCCTAACCCC+TGG | - | chr4_3:68896558-68896577 | None:intergenic | 40.0% | |
| TGCTATATAGCCAGGGAATA+CGG | - | chr4_3:68896658-68896677 | None:intergenic | 40.0% | |
| ATTCCCTGGCTATATAGCAA+AGG | + | chr4_3:68896659-68896678 | Msa0658720:intron | 40.0% | |
| ! | CTACCTTTGCTATATAGCCA+GGG | - | chr4_3:68896665-68896684 | None:intergenic | 40.0% |
| TAGACAAGCAGTACAGCAAT+AGG | - | chr4_3:68896773-68896792 | None:intergenic | 40.0% | |
| !! | GTCATTTTACTGAGCTGAGT+AGG | + | chr4_3:68896807-68896826 | Msa0658720:intron | 40.0% |
| ! | ATTTTACTGAGCTGAGTAGG+AGG | + | chr4_3:68896810-68896829 | Msa0658720:intron | 40.0% |
| GGTCAGTATGTGATTCGATT+TGG | + | chr4_3:68896937-68896956 | Msa0658720:CDS | 40.0% | |
| AAGAATGTACATGACGTCCT+AGG | - | chr4_3:68897244-68897263 | None:intergenic | 40.0% | |
| CTTGCCAATAGTCAGAAAGT+TGG | + | chr4_3:68897300-68897319 | Msa0658720:intron | 40.0% | |
| ! | GTGTTCTAAGCTAAACACCA+AGG | + | chr4_3:68897488-68897507 | Msa0658720:three_prime_UTR | 40.0% |
| TCTAAGCTAAACACCAAGGA+CGG | + | chr4_3:68897492-68897511 | Msa0658720:three_prime_UTR | 40.0% | |
| !!! | TGTCTGTTGATTCCTTTTGC+TGG | + | chr4_3:68897560-68897579 | Msa0658720:three_prime_UTR | 40.0% |
| !!! | TGTTGATTCCTTTTGCTGGA+TGG | + | chr4_3:68897564-68897583 | Msa0658720:three_prime_UTR | 40.0% |
| !! | GTTGATAGCAATCCTTCCTC+TGG | + | chr4_3:68888562-68888581 | Msa0658720:CDS | 45.0% |
| ACTCAAAATCCCAACCCAGA+TGG | + | chr4_3:68888598-68888617 | Msa0658720:CDS | 45.0% | |
| ATATCCTTGAACTGCCCAAC+AGG | - | chr4_3:68888724-68888743 | None:intergenic | 45.0% | |
| GTTGGGCAGTTCAAGGATAT+AGG | + | chr4_3:68888724-68888743 | Msa0658720:CDS | 45.0% | |
| ATAGGACCTTCAGGCAAAGT+GGG | - | chr4_3:68888754-68888773 | None:intergenic | 45.0% | |
| TTTACCTCAGATAAGGGGGT+TGG | - | chr4_3:68888784-68888803 | None:intergenic | 45.0% | |
| ! | CCCCTTATCTGAGGTAAAAC+AGG | + | chr4_3:68888786-68888805 | Msa0658720:CDS | 45.0% |
| CCCATTCATAGAGGTTAGGA+AGG | - | chr4_3:68888822-68888841 | None:intergenic | 45.0% | |
| ATTCGAAGGAATTTCTGCGC+TGG | + | chr4_3:68888941-68888960 | Msa0658720:CDS | 45.0% | |
| TTCGAAGGAATTTCTGCGCT+GGG | + | chr4_3:68888942-68888961 | Msa0658720:CDS | 45.0% | |
| GGCAGGGATACCTGTTATAA+AGG | - | chr4_3:68889040-68889059 | None:intergenic | 45.0% | |
| ACAAGAAGCTTCGAACCAAG+AGG | + | chr4_3:68889118-68889137 | Msa0658720:CDS | 45.0% | |
| TGCTCCTGTCATGATCAAAG+AGG | + | chr4_3:68889143-68889162 | Msa0658720:CDS | 45.0% | |
| GTCACCTCTTTGATCATGAC+AGG | - | chr4_3:68889150-68889169 | None:intergenic | 45.0% | |
| TGATCAAAGAGGTGACCAGA+AGG | + | chr4_3:68889154-68889173 | Msa0658720:CDS | 45.0% | |
| GATCAAAGAGGTGACCAGAA+GGG | + | chr4_3:68889155-68889174 | Msa0658720:CDS | 45.0% | |
| GGGTGCACTTGGAGAATATA+TGG | + | chr4_3:68889175-68889194 | Msa0658720:CDS | 45.0% | |
| GCACTTGGAGAATATATGGC+AGG | + | chr4_3:68889179-68889198 | Msa0658720:CDS | 45.0% | |
| AAGAATCACTCCTGCTGTGT+AGG | - | chr4_3:68889208-68889227 | None:intergenic | 45.0% | |
| !! | CAGTATTGGCAAGTTGCTAC+TGG | - | chr4_3:68889237-68889256 | None:intergenic | 45.0% |
| CAGTAGCAACTTGCCAATAC+TGG | + | chr4_3:68889235-68889254 | Msa0658720:CDS | 45.0% | |
| CAGAATCAACAGTCACACCA+GGG | + | chr4_3:68889355-68889374 | Msa0658720:CDS | 45.0% | |
| CACACCAGGGTTTAGAAAGA+TGG | + | chr4_3:68889368-68889387 | Msa0658720:CDS | 45.0% | |
| ATGATGTTCCTGCGGTTACA+AGG | + | chr4_3:68889397-68889416 | Msa0658720:CDS | 45.0% | |
| !! | CTAATTAGCCTTGTAACCGC+AGG | - | chr4_3:68889408-68889427 | None:intergenic | 45.0% |
| CTGCGGTTACAAGGCTAATT+AGG | + | chr4_3:68889406-68889425 | Msa0658720:CDS | 45.0% | |
| CTATCGACAACATTCTCCCT+AGG | - | chr4_3:68889498-68889517 | None:intergenic | 45.0% | |
| TGAAAGTCCTGAAACTCACG+AGG | + | chr4_3:68889527-68889546 | Msa0658720:CDS | 45.0% | |
| AAGGAACTGAAGTTTGGACC+AGG | + | chr4_3:68889756-68889775 | Msa0658720:CDS | 45.0% | |
| GCATTGAAGTCATCAGAGCT+TGG | + | chr4_3:68889825-68889844 | Msa0658720:CDS | 45.0% | |
| TTCCTTCTCAGAGGCAATTC+TGG | + | chr4_3:68890005-68890024 | Msa0658720:intron | 45.0% | |
| TTCTCAGAGGCAATTCTGGA+GGG | + | chr4_3:68890009-68890028 | Msa0658720:intron | 45.0% | |
| CGATCCTTCACTCCTTCAAA+TGG | + | chr4_3:68890201-68890220 | Msa0658720:intron | 45.0% | |
| !!! | GGGACTTTTTCGTCAAACTC+TGG | + | chr4_3:68890723-68890742 | Msa0658720:intron | 45.0% |
| GTCAAACTCTGGGTTTCTGA+TGG | + | chr4_3:68890734-68890753 | Msa0658720:CDS | 45.0% | |
| ! | GGTTGCTTCAAAACCGGTTT+AGG | - | chr4_3:68890875-68890894 | None:intergenic | 45.0% |
| GGCTGCAATTGGATAGAGTT+TGG | + | chr4_3:68891621-68891640 | Msa0658720:intron | 45.0% | |
| ATTTGCCCACTCGATATCTC+TGG | - | chr4_3:68891915-68891934 | None:intergenic | 45.0% | |
| CGAGTGGGCAAATCTTGTAT+TGG | + | chr4_3:68891922-68891941 | Msa0658720:CDS | 45.0% | |
| CTACAGGCTGCATCATAACA+AGG | - | chr4_3:68892313-68892332 | None:intergenic | 45.0% | |
| ! | CTTGTTATGATGCAGCCTGT+AGG | + | chr4_3:68892311-68892330 | Msa0658720:intron | 45.0% |
| TGGCCCCCTCGTAAAAAAAA+TGG | + | chr4_3:68892840-68892859 | Msa0658720:intron | 45.0% | |
| !! | AAAAATGGCTAGCTTCGCCA+CGG | + | chr4_3:68892855-68892874 | Msa0658720:intron | 45.0% |
| GAGAATGACAAGAGACAACG+AGG | + | chr4_3:68893077-68893096 | Msa0658720:intron | 45.0% | |
| ATGGGCATTCGCTCAATTGT+AGG | + | chr4_3:68893213-68893232 | Msa0658720:intron | 45.0% | |
| GAGCATTAACGAAGCACAAG+CGG | - | chr4_3:68893552-68893571 | None:intergenic | 45.0% | |
| TGTGAATGAAAGTGGGGACT+GGG | - | chr4_3:68893594-68893613 | None:intergenic | 45.0% | |
| GGGAAATAAGATCTGCAAGG+CGG | - | chr4_3:68893643-68893662 | None:intergenic | 45.0% | |
| TTAGATGGGCGTCATCTACT+TGG | + | chr4_3:68894264-68894283 | Msa0658720:intron | 45.0% | |
| ! | GATTTGGGCACCTTTTGCAA+TGG | + | chr4_3:68894460-68894479 | Msa0658720:intron | 45.0% |
| GAATAACATACATCGGCCCT+TGG | - | chr4_3:68894486-68894505 | None:intergenic | 45.0% | |
| GGCCGATGTATGTTATTCAG+TGG | + | chr4_3:68894488-68894507 | Msa0658720:intron | 45.0% | |
| CTATGGGGAATGAGCTCTTT+AGG | + | chr4_3:68894661-68894680 | Msa0658720:CDS | 45.0% | |
| ! | AGAATCCTGGCTTGTGGAAT+TGG | + | chr4_3:68895508-68895527 | Msa0658720:CDS | 45.0% |
| AATGTCCAATTCCACAAGCC+AGG | - | chr4_3:68895516-68895535 | None:intergenic | 45.0% | |
| CTCACCATCAGCATCTTTCA+AGG | - | chr4_3:68895541-68895560 | None:intergenic | 45.0% | |
| ! | CTTGAAAGATGCTGATGGTG+AGG | + | chr4_3:68895539-68895558 | Msa0658720:CDS | 45.0% |
| CCCCCATATCATAAGAGCAA+TGG | - | chr4_3:68895970-68895989 | None:intergenic | 45.0% | |
| TATGGGGGGTAAAAAGAGAG+AGG | + | chr4_3:68895982-68896001 | Msa0658720:intron | 45.0% | |
| ATGGGGGGTAAAAAGAGAGA+GGG | + | chr4_3:68895983-68896002 | Msa0658720:intron | 45.0% | |
| CAATACCTTAGACTGTGGCA+TGG | - | chr4_3:68896016-68896035 | None:intergenic | 45.0% | |
| TGCTGCAATACCTTAGACTG+TGG | - | chr4_3:68896021-68896040 | None:intergenic | 45.0% | |
| CTGCTGCCTTGTAGCATATT+TGG | + | chr4_3:68896086-68896105 | Msa0658720:intron | 45.0% | |
| CAAACTCTAATCCAGGGGTT+AGG | + | chr4_3:68896544-68896563 | Msa0658720:intron | 45.0% | |
| ! | GCTACCTTTGCTATATAGCC+AGG | - | chr4_3:68896666-68896685 | None:intergenic | 45.0% |
| TCTGGTACACAGCCAATAGA+GGG | - | chr4_3:68896690-68896709 | None:intergenic | 45.0% | |
| ATCTGGTACACAGCCAATAG+AGG | - | chr4_3:68896691-68896710 | None:intergenic | 45.0% | |
| GTGCAGATTCTAACTGATGC+TGG | + | chr4_3:68896916-68896935 | Msa0658720:intron | 45.0% | |
| !! | CAAGATTGGCCTTGCTAATG+CGG | + | chr4_3:68896978-68896997 | Msa0658720:CDS | 45.0% |
| AGATTCTGACCGCATTAGCA+AGG | - | chr4_3:68896990-68897009 | None:intergenic | 45.0% | |
| GAGAAAAGCTCTCCCTATCT+TGG | + | chr4_3:68897027-68897046 | Msa0658720:intron | 45.0% | |
| GACTACTTCTCAAGACATGG+AGG | + | chr4_3:68897161-68897180 | Msa0658720:CDS | 45.0% | |
| GGATTACCCTTCATTGACGT+CGG | + | chr4_3:68897372-68897391 | Msa0658720:CDS | 45.0% | |
| ! | ATTCCTTTTGCTGGATGGCA+AGG | + | chr4_3:68897569-68897588 | Msa0658720:three_prime_UTR | 45.0% |
| !!! | AAATAAATAAATATTTTTTG+AGG | - | chr4_3:68892467-68892486 | None:intergenic | 5.0% |
| !!! | TTTAATTATATTTTTAGATT+TGG | + | chr4_3:68892820-68892839 | Msa0658720:intron | 5.0% |
| TCTTCAGGTGATCCAGAGGA+AGG | - | chr4_3:68888577-68888596 | None:intergenic | 50.0% | |
| AGTCTCTTCAGGTGATCCAG+AGG | - | chr4_3:68888581-68888600 | None:intergenic | 50.0% | |
| GGTGCATTTCCATCTGGGTT+GGG | - | chr4_3:68888610-68888629 | None:intergenic | 50.0% | |
| AGGTGCATTTCCATCTGGGT+TGG | - | chr4_3:68888611-68888630 | None:intergenic | 50.0% | |
| CAGCAGGTGCATTTCCATCT+GGG | - | chr4_3:68888615-68888634 | None:intergenic | 50.0% | |
| TCAGCAGGTGCATTTCCATC+TGG | - | chr4_3:68888616-68888635 | None:intergenic | 50.0% | |
| TCAACCTGTTGGGCAGTTCA+AGG | + | chr4_3:68888717-68888736 | Msa0658720:CDS | 50.0% | |
| TAGGACCTTCAGGCAAAGTG+GGG | - | chr4_3:68888753-68888772 | None:intergenic | 50.0% | |
| GATAGGACCTTCAGGCAAAG+TGG | - | chr4_3:68888755-68888774 | None:intergenic | 50.0% | |
| CTCATCACGGACTCGAATTC+GGG | - | chr4_3:68889061-68889080 | None:intergenic | 50.0% | |
| CCTCATCACGGACTCGAATT+CGG | - | chr4_3:68889062-68889081 | None:intergenic | 50.0% | |
| ATTCTCCAAGTGCACCCTTC+TGG | - | chr4_3:68889172-68889191 | None:intergenic | 50.0% | |
| TGGCAAGTTGCTACTGGTGT+AGG | - | chr4_3:68889231-68889250 | None:intergenic | 50.0% | |
| !! | CCTGGTGTGACTGTTGATTC+TGG | - | chr4_3:68889357-68889376 | None:intergenic | 50.0% |
| CCAGAATCAACAGTCACACC+AGG | + | chr4_3:68889354-68889373 | Msa0658720:CDS | 50.0% | |
| !! | TGGAGCATTGGCTTCTTCCT+AGG | + | chr4_3:68889478-68889497 | Msa0658720:CDS | 50.0% |
| !! | GGAGCATTGGCTTCTTCCTA+GGG | + | chr4_3:68889479-68889498 | Msa0658720:CDS | 50.0% |
| TCAGTGACCTCGTGAGTTTC+AGG | - | chr4_3:68889537-68889556 | None:intergenic | 50.0% | |
| GGGTTGCCAAGGATACTAGA+AGG | - | chr4_3:68889582-68889601 | None:intergenic | 50.0% | |
| CTGAAGTTTGGACCAGGTGA+TGG | + | chr4_3:68889762-68889781 | Msa0658720:CDS | 50.0% | |
| ! | CTCCAGAATTGCCTCTGAGA+AGG | - | chr4_3:68890010-68890029 | None:intergenic | 50.0% |
| CTTCTCAGAGGCAATTCTGG+AGG | + | chr4_3:68890008-68890027 | Msa0658720:intron | 50.0% | |
| GAGGGTCAGTGATGCATAAG+TGG | + | chr4_3:68890027-68890046 | Msa0658720:intron | 50.0% | |
| GGATCGTCTAATCGAAGTCC+AGG | - | chr4_3:68890187-68890206 | None:intergenic | 50.0% | |
| CGTTTCGGTTCCGAAAAGCT+TGG | - | chr4_3:68890687-68890706 | None:intergenic | 50.0% | |
| TTCACCTCTTCGGGAGATTC+CGG | - | chr4_3:68890932-68890951 | None:intergenic | 50.0% | |
| AAGTTGGACCTGGCAAGTAG+AGG | - | chr4_3:68891884-68891903 | None:intergenic | 50.0% | |
| AGATGCATGCTACCCACAGT+CGG | + | chr4_3:68892200-68892219 | Msa0658720:CDS | 50.0% | |
| GATCATCACTGACCGACTGT+GGG | - | chr4_3:68892215-68892234 | None:intergenic | 50.0% | |
| GAGCAACCTCATTACCAGAC+AGG | + | chr4_3:68892349-68892368 | Msa0658720:CDS | 50.0% | |
| GGAGGCAAAGCTTCATGTGT+TGG | + | chr4_3:68892438-68892457 | Msa0658720:intron | 50.0% | |
| !! | AAAATGGCTAGCTTCGCCAC+GGG | + | chr4_3:68892856-68892875 | Msa0658720:intron | 50.0% |
| TGACAAGAGACAACGAGGAC+AGG | + | chr4_3:68893082-68893101 | Msa0658720:intron | 50.0% | |
| GACAAGAGACAACGAGGACA+GGG | + | chr4_3:68893083-68893102 | Msa0658720:intron | 50.0% | |
| !! | CGGTGTTATGAGGAGAAGAG+AGG | - | chr4_3:68893532-68893551 | None:intergenic | 50.0% |
| !! | GAAGCACAAGCGGTGTTATG+AGG | - | chr4_3:68893542-68893561 | None:intergenic | 50.0% |
| GTGAATGAAAGTGGGGACTG+GGG | - | chr4_3:68893593-68893612 | None:intergenic | 50.0% | |
| GTGTGAATGAAAGTGGGGAC+TGG | - | chr4_3:68893595-68893614 | None:intergenic | 50.0% | |
| CTGCAAGGCGGCAAAAGAAA+GGG | - | chr4_3:68893631-68893650 | None:intergenic | 50.0% | |
| TCTGCAAGGCGGCAAAAGAA+AGG | - | chr4_3:68893632-68893651 | None:intergenic | 50.0% | |
| GCTGATGCAAAAGCCACAGA+AGG | - | chr4_3:68893700-68893719 | None:intergenic | 50.0% | |
| CTCCAAAGAAACAGGGTGGA+TGG | - | chr4_3:68893922-68893941 | None:intergenic | 50.0% | |
| ! | CATCCACCCTGTTTCTTTGG+AGG | + | chr4_3:68893920-68893939 | Msa0658720:intron | 50.0% |
| TGTCCTCCAAAGAAACAGGG+TGG | - | chr4_3:68893926-68893945 | None:intergenic | 50.0% | |
| CTACGGGTGCAGGGAAAAAA+TGG | - | chr4_3:68894368-68894387 | None:intergenic | 50.0% | |
| TGCAAGATTCTACGGGTGCA+GGG | - | chr4_3:68894377-68894396 | None:intergenic | 50.0% | |
| ! | GCACCTTTTGCAATGGCCAA+GGG | + | chr4_3:68894467-68894486 | Msa0658720:intron | 50.0% |
| CGAAGCAACTGCAGCAAGAA+AGG | - | chr4_3:68894606-68894625 | None:intergenic | 50.0% | |
| TGCTGCAGTTGCTTCGTCTA+AGG | + | chr4_3:68894610-68894629 | Msa0658720:intron | 50.0% | |
| TGCAGTTGCTTCGTCTAAGG+AGG | + | chr4_3:68894613-68894632 | Msa0658720:intron | 50.0% | |
| ! | GTTAGGTCCGTAGACCCTTT+TGG | + | chr4_3:68894817-68894836 | Msa0658720:intron | 50.0% |
| CAGGAATCAGCAATTTGCGG+TGG | + | chr4_3:68895482-68895501 | Msa0658720:intron | 50.0% | |
| TTTGCGGTGGTTGAGAATCC+TGG | + | chr4_3:68895495-68895514 | Msa0658720:CDS | 50.0% | |
| ! | TGGTTGAGAATCCTGGCTTG+TGG | + | chr4_3:68895502-68895521 | Msa0658720:CDS | 50.0% |
| ! | GATCGTGATTGGAGGGGTTT+TGG | + | chr4_3:68895576-68895595 | Msa0658720:CDS | 50.0% |
| !!! | TTGGAGGGGTTTTGGCTTTG+AGG | + | chr4_3:68895584-68895603 | Msa0658720:CDS | 50.0% |
| GGGGTAAAAAGAGAGAGGGT+GGG | + | chr4_3:68895987-68896006 | Msa0658720:intron | 50.0% | |
| ATATAGCCAGGGAATACGGC+AGG | - | chr4_3:68896654-68896673 | None:intergenic | 50.0% | |
| TGGTACACAGCCAATAGAGG+GGG | - | chr4_3:68896688-68896707 | None:intergenic | 50.0% | |
| CTGGTACACAGCCAATAGAG+GGG | - | chr4_3:68896689-68896708 | None:intergenic | 50.0% | |
| TCTGATCCCAGCTCCAAGAT+TGG | + | chr4_3:68896964-68896983 | Msa0658720:CDS | 50.0% | |
| CGCATTAGCAAGGCCAATCT+TGG | - | chr4_3:68896980-68896999 | None:intergenic | 50.0% | |
| TCAGTGGACGTCTGACTTCA+AGG | - | chr4_3:68897091-68897110 | None:intergenic | 50.0% | |
| AGCTACAGCAACTGCTCTCT+CGG | - | chr4_3:68897120-68897139 | None:intergenic | 50.0% | |
| ACTTCTCAAGACATGGAGGC+TGG | + | chr4_3:68897165-68897184 | Msa0658720:CDS | 50.0% | |
| TACTCGCCGACGTCAATGAA+GGG | - | chr4_3:68897381-68897400 | None:intergenic | 50.0% | |
| TTACTCGCCGACGTCAATGA+AGG | - | chr4_3:68897382-68897401 | None:intergenic | 50.0% | |
| TACATGAATGGAGCCGTCCT+TGG | - | chr4_3:68897508-68897527 | None:intergenic | 50.0% | |
| GGTGGTTCGATAGGACCTTC+AGG | - | chr4_3:68888763-68888782 | None:intergenic | 55.0% | |
| !! | AAGGGGGTTGGTGGTTCGAT+AGG | - | chr4_3:68888772-68888791 | None:intergenic | 55.0% |
| ACCACCAACCCCCTTATCTG+AGG | + | chr4_3:68888777-68888796 | Msa0658720:CDS | 55.0% | |
| ACCTCAGATAAGGGGGTTGG+TGG | - | chr4_3:68888781-68888800 | None:intergenic | 55.0% | |
| TGCCAAGCTGTGAAGTAGCC+CGG | - | chr4_3:68888979-68888998 | None:intergenic | 55.0% | |
| CCGAATTCGAGTCCGTGATG+AGG | + | chr4_3:68889059-68889078 | Msa0658720:CDS | 55.0% | |
| CATGACAGGAGCAAGCCTCT+TGG | - | chr4_3:68889136-68889155 | None:intergenic | 55.0% | |
| !! | GATGTCGGTTTCTCTCGGCT+CGG | + | chr4_3:68889288-68889307 | Msa0658720:CDS | 55.0% |
| !! | GGCAAGTAGAGGTGCTACCT+TGG | - | chr4_3:68891873-68891892 | None:intergenic | 55.0% |
| AGGTAGCACCTCTACTTGCC+AGG | + | chr4_3:68891873-68891892 | Msa0658720:CDS | 55.0% | |
| GGATCATCACTGACCGACTG+TGG | - | chr4_3:68892216-68892235 | None:intergenic | 55.0% | |
| ! | GGCCATCCACCCTGTTTCTT+TGG | + | chr4_3:68893917-68893936 | Msa0658720:intron | 55.0% |
| GTGCAAGATTCTACGGGTGC+AGG | - | chr4_3:68894378-68894397 | None:intergenic | 55.0% | |
| GCACCCGTAGAATCTTGCAC+AGG | + | chr4_3:68894378-68894397 | Msa0658720:intron | 55.0% | |
| ! | GGCACCTTTTGCAATGGCCA+AGG | + | chr4_3:68894466-68894485 | Msa0658720:intron | 55.0% |
| ! | AGGTCCGTAGACCCTTTTGG+TGG | + | chr4_3:68894820-68894839 | Msa0658720:intron | 55.0% |
| TTGGAGTAGTTCACAGGCGG+TGG | + | chr4_3:68894983-68895002 | Msa0658720:CDS | 55.0% | |
| GGGGGTAAAAAGAGAGAGGG+TGG | + | chr4_3:68895986-68896005 | Msa0658720:intron | 55.0% | |
| GGCATCCATGCCACAGTCTA+AGG | + | chr4_3:68896008-68896027 | Msa0658720:intron | 55.0% | |
| AGTTCTCCTGCCGTATTCCC+TGG | + | chr4_3:68896645-68896664 | Msa0658720:intron | 55.0% | |
| GCAAAGGTAGCCCCCTCTAT+TGG | + | chr4_3:68896675-68896694 | Msa0658720:intron | 55.0% | |
| GCAAGGCCAATCTTGGAGCT+GGG | - | chr4_3:68896973-68896992 | None:intergenic | 55.0% | |
| AGCAAGGCCAATCTTGGAGC+TGG | - | chr4_3:68896974-68896993 | None:intergenic | 55.0% | |
| AGCAACTGCTCTCTCGGCAA+GGG | - | chr4_3:68897114-68897133 | None:intergenic | 55.0% | |
| ! | TGGCCTTGCCATCCAGCAAA+AGG | - | chr4_3:68897575-68897594 | None:intergenic | 55.0% |
| GGGAACCCCACTTTGCCTGA+AGG | + | chr4_3:68888745-68888764 | Msa0658720:CDS | 60.0% | |
| GAAGTAGCCCGGAGGTTGCA+GGG | - | chr4_3:68888968-68888987 | None:intergenic | 60.0% | |
| TGAAGTAGCCCGGAGGTTGC+AGG | - | chr4_3:68888969-68888988 | None:intergenic | 60.0% | |
| CAAGCTGTGAAGTAGCCCGG+AGG | - | chr4_3:68888976-68888995 | None:intergenic | 60.0% | |
| CTCCGGGCTACTTCACAGCT+TGG | + | chr4_3:68888974-68888993 | Msa0658720:CDS | 60.0% | |
| CACGGACTCGAATTCGGGCA+GGG | - | chr4_3:68889056-68889075 | None:intergenic | 60.0% | |
| TCACGGACTCGAATTCGGGC+AGG | - | chr4_3:68889057-68889076 | None:intergenic | 60.0% | |
| ! | GGTGACCAGAAGGGTGCACT+TGG | + | chr4_3:68889164-68889183 | Msa0658720:CDS | 60.0% |
| !! | GTTTCTCTCGGCTCGGTGCT+CGG | + | chr4_3:68889295-68889314 | Msa0658720:CDS | 60.0% |
| GAAGCCGGAATCTCCCGAAG+AGG | + | chr4_3:68890925-68890944 | Msa0658720:CDS | 60.0% | |
| CGGCCCTTGGCCATTGCAAA+AGG | - | chr4_3:68894473-68894492 | None:intergenic | 60.0% | |
| TTCACAGGCGGTGGCATCTC+TGG | + | chr4_3:68894992-68895011 | Msa0658720:CDS | 60.0% | |
| CAGCAACTGCTCTCTCGGCA+AGG | - | chr4_3:68897115-68897134 | None:intergenic | 60.0% | |
| TGGCAGGCTGCCTACACAGC+AGG | + | chr4_3:68889195-68889214 | Msa0658720:CDS | 65.0% | |
| GCTCTCTCGGCAAGGGTCAG+TGG | - | chr4_3:68897107-68897126 | None:intergenic | 65.0% | |
| GCGCTGGGCCCTGCAACCTC+CGG | + | chr4_3:68888957-68888976 | Msa0658720:CDS | 75.0% | |
| CGCTGGGCCCTGCAACCTCC+GGG | + | chr4_3:68888958-68888977 | Msa0658720:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 68888559 | 68897687 | 68888559 | ID=Msa0658720;Name=Msa0658720 |
| chr4_3 | mRNA | 68888559 | 68897687 | 68888559 | ID=Msa0658720-mRNA-1;Parent=Msa0658720;Name=Msa0658720-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.90|0.83|1|1|1|12|286|739 |
| chr4_3 | exon | 68888559 | 68889859 | 68888559 | ID=Msa0658720-mRNA-1:exon:20079;Parent=Msa0658720-mRNA-1 |
| chr4_3 | exon | 68890724 | 68890946 | 68890724 | ID=Msa0658720-mRNA-1:exon:20080;Parent=Msa0658720-mRNA-1 |
| chr4_3 | exon | 68891869 | 68891955 | 68891869 | ID=Msa0658720-mRNA-1:exon:20081;Parent=Msa0658720-mRNA-1 |
| chr4_3 | exon | 68892180 | 68892221 | 68892180 | ID=Msa0658720-mRNA-1:exon:20082;Parent=Msa0658720-mRNA-1 |
| chr4_3 | exon | 68892326 | 68892370 | 68892326 | ID=Msa0658720-mRNA-1:exon:20083;Parent=Msa0658720-mRNA-1 |
| chr4_3 | exon | 68894618 | 68894683 | 68894618 | ID=Msa0658720-mRNA-1:exon:20084;Parent=Msa0658720-mRNA-1 |
| chr4_3 | exon | 68894822 | 68894878 | 68894822 | ID=Msa0658720-mRNA-1:exon:20085;Parent=Msa0658720-mRNA-1 |
| chr4_3 | exon | 68894979 | 68895040 | 68894979 | ID=Msa0658720-mRNA-1:exon:20086;Parent=Msa0658720-mRNA-1 |
| chr4_3 | exon | 68895485 | 68895605 | 68895485 | ID=Msa0658720-mRNA-1:exon:20087;Parent=Msa0658720-mRNA-1 |
| chr4_3 | exon | 68896922 | 68896999 | 68896922 | ID=Msa0658720-mRNA-1:exon:20088;Parent=Msa0658720-mRNA-1 |
| chr4_3 | exon | 68897080 | 68897186 | 68897080 | ID=Msa0658720-mRNA-1:exon:20089;Parent=Msa0658720-mRNA-1 |
| chr4_3 | exon | 68897371 | 68897687 | 68897371 | ID=Msa0658720-mRNA-1:exon:20090;Parent=Msa0658720-mRNA-1 |
| chr4_3 | CDS | 68888559 | 68889859 | 68888559 | ID=Msa0658720-mRNA-1:cds;Parent=Msa0658720-mRNA-1 |
| chr4_3 | CDS | 68890724 | 68890946 | 68890724 | ID=Msa0658720-mRNA-1:cds;Parent=Msa0658720-mRNA-1 |
| chr4_3 | CDS | 68891869 | 68891955 | 68891869 | ID=Msa0658720-mRNA-1:cds;Parent=Msa0658720-mRNA-1 |
| chr4_3 | CDS | 68892180 | 68892221 | 68892180 | ID=Msa0658720-mRNA-1:cds;Parent=Msa0658720-mRNA-1 |
| chr4_3 | CDS | 68892326 | 68892370 | 68892326 | ID=Msa0658720-mRNA-1:cds;Parent=Msa0658720-mRNA-1 |
| chr4_3 | CDS | 68894618 | 68894683 | 68894618 | ID=Msa0658720-mRNA-1:cds;Parent=Msa0658720-mRNA-1 |
| chr4_3 | CDS | 68894822 | 68894878 | 68894822 | ID=Msa0658720-mRNA-1:cds;Parent=Msa0658720-mRNA-1 |
| chr4_3 | CDS | 68894979 | 68895040 | 68894979 | ID=Msa0658720-mRNA-1:cds;Parent=Msa0658720-mRNA-1 |
| chr4_3 | CDS | 68895485 | 68895605 | 68895485 | ID=Msa0658720-mRNA-1:cds;Parent=Msa0658720-mRNA-1 |
| chr4_3 | CDS | 68896922 | 68896999 | 68896922 | ID=Msa0658720-mRNA-1:cds;Parent=Msa0658720-mRNA-1 |
| chr4_3 | CDS | 68897080 | 68897186 | 68897080 | ID=Msa0658720-mRNA-1:cds;Parent=Msa0658720-mRNA-1 |
| chr4_3 | CDS | 68897371 | 68897401 | 68897371 | ID=Msa0658720-mRNA-1:cds;Parent=Msa0658720-mRNA-1 |
| chr4_3 | three_prime_UTR | 68897402 | 68897687 | 68897402 | ID=Msa0658720-mRNA-1:three_prime_utr;Parent=Msa0658720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
