Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0054730 | XP_003588866.1 | 96.471 | 170 | 6 | 0 | 1 | 170 | 1 | 170 | 1.32e-106 | 326 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0054730 | sp|Q9M084|SYDC2_ARATH | 41.398 | 186 | 91 | 4 | 3 | 170 | 2 | 187 | 7.67e-28 | 112 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0054730 | G7I885 | 96.471 | 170 | 6 | 0 | 1 | 170 | 1 | 170 | 6.28e-107 | 326 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011170 | Msa0054730 | -0.801911 | 7.199826e-49 | -8.615850e-47 |
| Msa0013050 | Msa0054730 | 0.851305 | 9.679082e-61 | -8.615850e-47 |
| Msa0028660 | Msa0054730 | -0.802770 | 4.791643e-49 | -8.615850e-47 |
| Msa0036220 | Msa0054730 | 0.825219 | 5.281878e-54 | -8.615850e-47 |
| Msa0036670 | Msa0054730 | -0.818249 | 2.163136e-52 | -8.615850e-47 |
| Msa0039330 | Msa0054730 | -0.831369 | 1.736018e-55 | -8.615850e-47 |
| Msa0046660 | Msa0054730 | 0.815613 | 8.451504e-52 | -8.615850e-47 |
| Msa0049630 | Msa0054730 | -0.819741 | 9.901894e-53 | -8.615850e-47 |
| Msa0049650 | Msa0054730 | 0.815559 | 8.689479e-52 | -8.615850e-47 |
| Msa0054730 | Msa0057680 | 0.809516 | 1.820643e-50 | -8.615850e-47 |
| Msa0054730 | Msa0058440 | 0.820563 | 6.421748e-53 | -8.615850e-47 |
| Msa0054730 | Msa0063350 | 0.801755 | 7.751605e-49 | -8.615850e-47 |
| Msa0054730 | Msa0074700 | -0.806910 | 6.538534e-50 | -8.615850e-47 |
| Msa0054730 | Msa0076320 | -0.806866 | 6.680123e-50 | -8.615850e-47 |
| Msa0054730 | Msa0090770 | 0.860593 | 1.853565e-63 | -8.615850e-47 |
| Msa0054730 | Msa0106370 | 0.918799 | 9.970999e-87 | -8.615850e-47 |
| Msa0054730 | Msa0114060 | -0.809794 | 1.586388e-50 | -8.615850e-47 |
| Msa0054730 | Msa0119850 | -0.822484 | 2.310980e-53 | -8.615850e-47 |
| Msa0054730 | Msa0127650 | -0.806115 | 9.619227e-50 | -8.615850e-47 |
| Msa0054730 | Msa0129790 | 0.800236 | 1.584151e-48 | -8.615850e-47 |
| Msa0054730 | Msa0143140 | 0.816644 | 4.971371e-52 | -8.615850e-47 |
| Msa0054730 | Msa0153000 | 0.816163 | 6.370114e-52 | -8.615850e-47 |
| Msa0054730 | Msa0162770 | 0.802636 | 5.107911e-49 | -8.615850e-47 |
| Msa0054730 | Msa0178350 | -0.809590 | 1.754862e-50 | -8.615850e-47 |
| Msa0054730 | Msa0183300 | 0.806773 | 6.990333e-50 | -8.615850e-47 |
| Msa0054730 | Msa0183640 | 0.857766 | 1.305275e-62 | -8.615850e-47 |
| Msa0054730 | Msa0185640 | 0.847319 | 1.247130e-59 | -8.615850e-47 |
| Msa0054730 | Msa0220580 | -0.811049 | 8.503661e-51 | -8.615850e-47 |
| Msa0054730 | Msa0226250 | -0.808432 | 3.106698e-50 | -8.615850e-47 |
| Msa0054730 | Msa0229490 | 0.820862 | 5.479792e-53 | -8.615850e-47 |
| Msa0054730 | Msa0238070 | 0.800952 | 1.132237e-48 | -8.615850e-47 |
| Msa0054730 | Msa0240780 | -0.803312 | 3.701924e-49 | -8.615850e-47 |
| Msa0054730 | Msa0258670 | 0.827239 | 1.746011e-54 | -8.615850e-47 |
| Msa0054730 | Msa0260950 | 0.855345 | 6.714383e-62 | -8.615850e-47 |
| Msa0054730 | Msa0265380 | -0.822167 | 2.737705e-53 | -8.615850e-47 |
| Msa0054730 | Msa0267310 | -0.825769 | 3.912735e-54 | -8.615850e-47 |
| Msa0054730 | Msa0271960 | 0.811061 | 8.450390e-51 | -8.615850e-47 |
| Msa0054730 | Msa0280090 | -0.810510 | 1.112047e-50 | -8.615850e-47 |
| Msa0054730 | Msa0306210 | 0.830487 | 2.856513e-55 | -8.615850e-47 |
| Msa0054730 | Msa0318250 | -0.819022 | 1.444396e-52 | -8.615850e-47 |
| Msa0054730 | Msa0326670 | -0.812634 | 3.840482e-51 | -8.615850e-47 |
| Msa0054730 | Msa0333720 | 0.860373 | 2.161496e-63 | -8.615850e-47 |
| Msa0054730 | Msa0336420 | -0.802611 | 5.167222e-49 | -8.615850e-47 |
| Msa0054730 | Msa0342340 | 0.835768 | 1.384410e-56 | -8.615850e-47 |
| Msa0054730 | Msa0344830 | -0.807059 | 6.081169e-50 | -8.615850e-47 |
| Msa0054730 | Msa0352330 | -0.817516 | 3.166793e-52 | -8.615850e-47 |
| Msa0054730 | Msa0373930 | -0.845368 | 4.243211e-59 | -8.615850e-47 |
| Msa0054730 | Msa0376450 | 0.828145 | 1.058083e-54 | -8.615850e-47 |
| Msa0054730 | Msa0376570 | -0.818310 | 2.095117e-52 | -8.615850e-47 |
| Msa0054730 | Msa0379640 | -0.801139 | 1.036517e-48 | -8.615850e-47 |
| Msa0054730 | Msa0399340 | -0.800603 | 1.333805e-48 | -8.615850e-47 |
| Msa0054730 | Msa0409080 | -0.810075 | 1.380644e-50 | -8.615850e-47 |
| Msa0054730 | Msa0414950 | 0.800618 | 1.324530e-48 | -8.615850e-47 |
| Msa0054730 | Msa0421780 | 0.809729 | 1.638674e-50 | -8.615850e-47 |
| Msa0054730 | Msa0430620 | -0.801715 | 7.900648e-49 | -8.615850e-47 |
| Msa0054730 | Msa0442200 | -0.834415 | 3.036609e-56 | -8.615850e-47 |
| Msa0054730 | Msa0442850 | -0.828026 | 1.130093e-54 | -8.615850e-47 |
| Msa0054730 | Msa0449590 | 0.808355 | 3.226358e-50 | -8.615850e-47 |
| Msa0054730 | Msa0459770 | 0.854251 | 1.394337e-61 | -8.615850e-47 |
| Msa0054730 | Msa0467900 | 0.842722 | 2.174399e-58 | -8.615850e-47 |
| Msa0054730 | Msa0471720 | 0.822677 | 2.084005e-53 | -8.615850e-47 |
| Msa0054730 | Msa0477080 | -0.837254 | 5.792649e-57 | -8.615850e-47 |
| Msa0054730 | Msa0479970 | -0.808886 | 2.484224e-50 | -8.615850e-47 |
| Msa0054730 | Msa0493630 | -0.841473 | 4.650786e-58 | -8.615850e-47 |
| Msa0054730 | Msa0500360 | -0.800997 | 1.108181e-48 | -8.615850e-47 |
| Msa0054730 | Msa0501800 | -0.800963 | 1.126029e-48 | -8.615850e-47 |
| Msa0054730 | Msa0502100 | -0.823865 | 1.100536e-53 | -8.615850e-47 |
| Msa0054730 | Msa0502880 | -0.804874 | 1.752224e-49 | -8.615850e-47 |
| Msa0054730 | Msa0515010 | -0.806880 | 6.635468e-50 | -8.615850e-47 |
| Msa0054730 | Msa0516390 | -0.803933 | 2.751850e-49 | -8.615850e-47 |
| Msa0054730 | Msa0516510 | 0.828061 | 1.108002e-54 | -8.615850e-47 |
| Msa0054730 | Msa0521430 | -0.820102 | 8.191089e-53 | -8.615850e-47 |
| Msa0054730 | Msa0528020 | 0.801670 | 8.071708e-49 | -8.615850e-47 |
| Msa0054730 | Msa0531970 | 0.827862 | 1.237158e-54 | -8.615850e-47 |
| Msa0054730 | Msa0532790 | 0.863931 | 1.750063e-64 | -8.615850e-47 |
| Msa0054730 | Msa0540070 | -0.847024 | 1.502178e-59 | -8.615850e-47 |
| Msa0054730 | Msa0549420 | 0.806313 | 8.739713e-50 | -8.615850e-47 |
| Msa0054730 | Msa0553220 | 0.855205 | 7.373763e-62 | -8.615850e-47 |
| Msa0054730 | Msa0564510 | -0.800194 | 1.616160e-48 | -8.615850e-47 |
| Msa0054730 | Msa0585000 | 0.884862 | 1.334433e-71 | -8.615850e-47 |
| Msa0054730 | Msa0599520 | -0.810600 | 1.063365e-50 | -8.615850e-47 |
| Msa0054730 | Msa0599890 | -0.801233 | 9.919542e-49 | -8.615850e-47 |
| Msa0054730 | Msa0605170 | -0.856615 | 2.854889e-62 | -8.615850e-47 |
| Msa0054730 | Msa0606420 | 0.801978 | 6.975188e-49 | -8.615850e-47 |
| Msa0054730 | Msa0607340 | 0.861739 | 8.299833e-64 | -8.615850e-47 |
| Msa0054730 | Msa0607750 | 0.839895 | 1.204865e-57 | -8.615850e-47 |
| Msa0054730 | Msa0608710 | -0.814587 | 1.428353e-51 | -8.615850e-47 |
| Msa0054730 | Msa0610430 | -0.811812 | 5.804485e-51 | -8.615850e-47 |
| Msa0054730 | Msa0612870 | 0.817270 | 3.597494e-52 | -8.615850e-47 |
| Msa0054730 | Msa0616560 | 0.802374 | 5.784194e-49 | -8.615850e-47 |
| Msa0054730 | Msa0625530 | 0.800780 | 1.227200e-48 | -8.615850e-47 |
| Msa0054730 | Msa0626090 | -0.820585 | 6.345234e-53 | -8.615850e-47 |
| Msa0054730 | Msa0647450 | 0.871859 | 4.955980e-67 | -8.615850e-47 |
| Msa0054730 | Msa0655990 | 0.821590 | 3.723270e-53 | -8.615850e-47 |
| Msa0054730 | Msa0658720 | 0.810847 | 9.404284e-51 | -8.615850e-47 |
| Msa0054730 | Msa0661190 | 0.940182 | 3.610542e-100 | -8.615850e-47 |
| Msa0054730 | Msa0662650 | -0.810322 | 1.221048e-50 | -8.615850e-47 |
| Msa0054730 | Msa0682840 | -0.802852 | 4.608171e-49 | -8.615850e-47 |
| Msa0054730 | Msa0699920 | 0.818419 | 1.979610e-52 | -8.615850e-47 |
| Msa0054730 | Msa0704470 | 0.812565 | 3.976815e-51 | -8.615850e-47 |
| Msa0054730 | Msa0708860 | -0.813228 | 2.847027e-51 | -8.615850e-47 |
| Msa0054730 | Msa0716840 | -0.815865 | 7.427379e-52 | -8.615850e-47 |
| Msa0054730 | Msa0722930 | -0.818425 | 1.973116e-52 | -8.615850e-47 |
| Msa0054730 | Msa0723140 | -0.812544 | 4.019914e-51 | -8.615850e-47 |
| Msa0054730 | Msa0743720 | -0.815638 | 8.344410e-52 | -8.615850e-47 |
| Msa0054730 | Msa0744170 | 0.808598 | 2.863109e-50 | -8.615850e-47 |
| Msa0054730 | Msa0756630 | 0.810968 | 8.852536e-51 | -8.615850e-47 |
| Msa0054730 | Msa0759470 | 0.830137 | 3.478446e-55 | -8.615850e-47 |
| Msa0054730 | Msa0795920 | -0.820027 | 8.519270e-53 | -8.615850e-47 |
| Msa0054730 | Msa0796700 | -0.824585 | 7.455181e-54 | -8.615850e-47 |
| Msa0054730 | Msa0806090 | -0.802179 | 6.343916e-49 | -8.615850e-47 |
| Msa0054730 | Msa0812760 | -0.817339 | 3.472060e-52 | -8.615850e-47 |
| Msa0054730 | Msa0818910 | -0.813775 | 2.157992e-51 | -8.615850e-47 |
| Msa0054730 | Msa0825240 | 0.827830 | 1.259793e-54 | -8.615850e-47 |
| Msa0054730 | Msa0827980 | -0.817573 | 3.074712e-52 | -8.615850e-47 |
| Msa0054730 | Msa0843780 | 0.801997 | 6.913933e-49 | -8.615850e-47 |
| Msa0054730 | Msa0864470 | 0.804729 | 1.878353e-49 | -8.615850e-47 |
| Msa0054730 | Msa0865990 | 0.801481 | 8.824714e-49 | -8.615850e-47 |
| Msa0054730 | Msa0866950 | -0.814429 | 1.547621e-51 | -8.615850e-47 |
| Msa0054730 | Msa0867050 | 0.843744 | 1.160484e-58 | -8.615850e-47 |
| Msa0054730 | Msa0876850 | 0.801381 | 9.248779e-49 | -8.615850e-47 |
| Msa0054730 | Msa0910980 | 0.808370 | 3.202502e-50 | -8.615850e-47 |
| Msa0054730 | Msa0923260 | 0.905568 | 3.739601e-80 | -8.615850e-47 |
| Msa0054730 | Msa0929740 | -0.813852 | 2.075137e-51 | -8.615850e-47 |
| Msa0054730 | Msa0930320 | 0.821893 | 3.169630e-53 | -8.615850e-47 |
| Msa0054730 | Msa0930460 | 0.826123 | 3.223754e-54 | -8.615850e-47 |
| Msa0054730 | Msa0942080 | 0.807400 | 5.149114e-50 | -8.615850e-47 |
| Msa0054730 | Msa0942560 | 0.805250 | 1.461500e-49 | -8.615850e-47 |
| Msa0054730 | Msa0945970 | -0.813510 | 2.467371e-51 | -8.615850e-47 |
| Msa0054730 | Msa0962190 | 0.881892 | 1.644825e-70 | -8.615850e-47 |
| Msa0054730 | Msa0967650 | 0.824914 | 6.234221e-54 | -8.615850e-47 |
| Msa0054730 | Msa0968680 | -0.800101 | 1.687657e-48 | -8.615850e-47 |
| Msa0054730 | Msa0992490 | 0.838531 | 2.720585e-57 | -8.615850e-47 |
| Msa0054730 | Msa0993290 | -0.841171 | 5.586768e-58 | -8.615850e-47 |
| Msa0054730 | Msa0993600 | -0.831637 | 1.490730e-55 | -8.615850e-47 |
| Msa0054730 | Msa0997450 | 0.816133 | 6.469956e-52 | -8.615850e-47 |
| Msa0054730 | Msa1012830 | -0.812499 | 4.110593e-51 | -8.615850e-47 |
| Msa0054730 | Msa1014540 | -0.815211 | 1.038209e-51 | -8.615850e-47 |
| Msa0054730 | Msa1018020 | 0.810098 | 1.364798e-50 | -8.615850e-47 |
| Msa0054730 | Msa1019840 | 0.824492 | 7.838142e-54 | -8.615850e-47 |
| Msa0054730 | Msa1030880 | 0.863325 | 2.698375e-64 | -8.615850e-47 |
| Msa0054730 | Msa1033410 | 0.831090 | 2.032229e-55 | -8.615850e-47 |
| Msa0054730 | Msa1041730 | -0.847018 | 1.508156e-59 | -8.615850e-47 |
| Msa0054730 | Msa1042890 | 0.812083 | 5.068246e-51 | -8.615850e-47 |
| Msa0054730 | Msa1054410 | -0.810404 | 1.172374e-50 | -8.615850e-47 |
| Msa0054730 | Msa1072460 | 0.843524 | 1.329156e-58 | -8.615850e-47 |
| Msa0054730 | Msa1073070 | 0.818156 | 2.270768e-52 | -8.615850e-47 |
| Msa0054730 | Msa1075220 | 0.846234 | 2.468381e-59 | -8.615850e-47 |
| Msa0054730 | Msa1078580 | 0.805622 | 1.221535e-49 | -8.615850e-47 |
| Msa0054730 | Msa1078750 | 0.808758 | 2.646441e-50 | -8.615850e-47 |
| Msa0054730 | Msa1084230 | -0.813626 | 2.326961e-51 | -8.615850e-47 |
| Msa0054730 | Msa1089040 | -0.801433 | 9.026242e-49 | -8.615850e-47 |
| Msa0054730 | Msa1116130 | 0.860766 | 1.643140e-63 | -8.615850e-47 |
| Msa0054730 | Msa1121450 | 0.834147 | 3.545488e-56 | -8.615850e-47 |
| Msa0054730 | Msa1124540 | 0.810035 | 1.408103e-50 | -8.615850e-47 |
| Msa0054730 | Msa1124960 | -0.800141 | 1.656792e-48 | -8.615850e-47 |
| Msa0054730 | Msa1125080 | -0.843242 | 1.580820e-58 | -8.615850e-47 |
| Msa0054730 | Msa1131940 | 0.801269 | 9.750672e-49 | -8.615850e-47 |
| Msa0054730 | Msa1132890 | -0.818298 | 2.108707e-52 | -8.615850e-47 |
| Msa0054730 | Msa1139000 | 0.851734 | 7.316380e-61 | -8.615850e-47 |
| Msa0054730 | Msa1143930 | 0.829535 | 4.875557e-55 | -8.615850e-47 |
| Msa0054730 | Msa1157930 | 0.812007 | 5.264167e-51 | -8.615850e-47 |
| Msa0054730 | Msa1162550 | 0.828206 | 1.022466e-54 | -8.615850e-47 |
| Msa0054730 | Msa1165360 | -0.800823 | 1.202747e-48 | -8.615850e-47 |
| Msa0054730 | Msa1167220 | -0.852287 | 5.096388e-61 | -8.615850e-47 |
| Msa0054730 | Msa1168680 | 0.803443 | 3.477919e-49 | -8.615850e-47 |
| Msa0054730 | Msa1170410 | -0.806797 | 6.909418e-50 | -8.615850e-47 |
| Msa0054730 | Msa1191890 | 0.818668 | 1.737935e-52 | -8.615850e-47 |
| Msa0054730 | Msa1200880 | 0.846432 | 2.180307e-59 | -8.615850e-47 |
| Msa0054730 | Msa1201430 | 0.859625 | 3.634645e-63 | -8.615850e-47 |
| Msa0054730 | Msa1204090 | -0.820458 | 6.786525e-53 | -8.615850e-47 |
| Msa0054730 | Msa1204980 | 0.842125 | 3.130599e-58 | -8.615850e-47 |
| Msa0054730 | Msa1205010 | 0.839414 | 1.607248e-57 | -8.615850e-47 |
| Msa0054730 | Msa1205130 | -0.815771 | 7.794163e-52 | -8.615850e-47 |
| Msa0054730 | Msa1226660 | -0.808017 | 3.807060e-50 | -8.615850e-47 |
| Msa0054730 | Msa1228590 | -0.810099 | 1.364324e-50 | -8.615850e-47 |
| Msa0054730 | Msa1244720 | 0.827619 | 1.415253e-54 | -8.615850e-47 |
| Msa0054730 | Msa1246510 | -0.818120 | 2.313571e-52 | -8.615850e-47 |
| Msa0054730 | Msa1249640 | 0.858581 | 7.469486e-63 | -8.615850e-47 |
| Msa0054730 | Msa1250890 | -0.804475 | 2.121927e-49 | -8.615850e-47 |
| Msa0054730 | Msa1253930 | 0.816895 | 4.367775e-52 | -8.615850e-47 |
| Msa0054730 | Msa1254370 | 0.857904 | 1.187395e-62 | -8.615850e-47 |
| Msa0054730 | Msa1256250 | -0.825908 | 3.626957e-54 | -8.615850e-47 |
| Msa0054730 | Msa1256540 | 0.840567 | 8.046964e-58 | -8.615850e-47 |
| Msa0054730 | Msa1259590 | 0.803001 | 4.293584e-49 | -8.615850e-47 |
| Msa0054730 | Msa1264540 | 0.831860 | 1.313742e-55 | -8.615850e-47 |
| Msa0054730 | Msa1271280 | -0.817279 | 3.581690e-52 | -8.615850e-47 |
| Msa0054730 | Msa1279210 | -0.808995 | 2.355116e-50 | -8.615850e-47 |
| Msa0054730 | Msa1289010 | -0.804286 | 2.323450e-49 | -8.615850e-47 |
| Msa0054730 | Msa1294610 | 0.839594 | 1.443059e-57 | -8.615850e-47 |
| Msa0054730 | Msa1296880 | -0.876706 | 1.128353e-68 | -8.615850e-47 |
| Msa0054730 | Msa1296960 | 0.847277 | 1.280319e-59 | -8.615850e-47 |
| Msa0054730 | Msa1302190 | 0.817182 | 3.764836e-52 | -8.615850e-47 |
| Msa0054730 | Msa1307660 | 0.857669 | 1.394605e-62 | -8.615850e-47 |
| Msa0054730 | Msa1310770 | 0.802550 | 5.319930e-49 | -8.615850e-47 |
| Msa0054730 | Msa1322190 | -0.822484 | 2.311684e-53 | -8.615850e-47 |
| Msa0054730 | Msa1332040 | 0.841480 | 4.633057e-58 | -8.615850e-47 |
| Msa0054730 | Msa1335860 | -0.800357 | 1.496877e-48 | -8.615850e-47 |
| Msa0054730 | Msa1335970 | 0.814073 | 1.855218e-51 | -8.615850e-47 |
| Msa0054730 | Msa1340650 | -0.800979 | 1.117573e-48 | -8.615850e-47 |
| Msa0054730 | Msa1357530 | -0.821745 | 3.428539e-53 | -8.615850e-47 |
| Msa0054730 | Msa1358610 | 0.842797 | 2.076136e-58 | -8.615850e-47 |
| Msa0054730 | Msa1365700 | 0.828043 | 1.119668e-54 | -8.615850e-47 |
| Msa0054730 | Msa1384820 | 0.826781 | 2.247446e-54 | -8.615850e-47 |
| Msa0054730 | Msa1392420 | -0.826198 | 3.094723e-54 | -8.615850e-47 |
| Msa0054730 | Msa1395230 | 0.841696 | 4.062212e-58 | -8.615850e-47 |
| Msa0054730 | Msa1396750 | 0.811304 | 7.484517e-51 | -8.615850e-47 |
| Msa0054730 | Msa1403680 | -0.814168 | 1.767340e-51 | -8.615850e-47 |
| Msa0054730 | Msa1410430 | 0.842097 | 3.183890e-58 | -8.615850e-47 |
| Msa0054730 | Msa1419800 | 0.809021 | 2.324611e-50 | -8.615850e-47 |
| Msa0054730 | Msa1426030 | -0.808165 | 3.541985e-50 | -8.615850e-47 |
| Msa0054730 | Msa1440000 | -0.812274 | 4.604348e-51 | -8.615850e-47 |
| Msa0054730 | Msa1442160 | 0.826915 | 2.086857e-54 | -8.615850e-47 |
| Msa0054730 | Msa1444060 | 0.808432 | 3.106884e-50 | -8.615850e-47 |
| Msa0054730 | Msa1444740 | -0.821773 | 3.378310e-53 | -8.615850e-47 |
| Msa0054730 | Msa1445610 | 0.860542 | 1.921568e-63 | -8.615850e-47 |
| Msa0054730 | Msa1449250 | 0.854492 | 1.187060e-61 | -8.615850e-47 |
| Msa0054730 | Msa1452240 | -0.818967 | 1.486540e-52 | -8.615850e-47 |
| Msa0054730 | Msa1453780 | 0.917035 | 8.667771e-86 | -8.615850e-47 |
| Msa0054730 | Msa1454120 | -0.807721 | 4.400995e-50 | -8.615850e-47 |
| Msa0054730 | Msa1454910 | 0.869413 | 3.153685e-66 | -8.615850e-47 |
| Msa0054730 | Msa1464940 | -0.826284 | 2.952096e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0054730 | MtrunA17_Chr1g0150111 | 96.471 | 170 | 6 | 0 | 1 | 170 | 1 | 170 | 1.21e-110 | 326 |
| Msa0054730 | MtrunA17_Chr5g0410321 | 46.809 | 188 | 60 | 3 | 1 | 188 | 62 | 209 | 2.43e-37 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0054730 | AT4G31180.1 | 41.398 | 186 | 91 | 4 | 3 | 170 | 2 | 187 | 7.79e-29 | 112 |
| Msa0054730 | AT4G31180.2 | 41.398 | 186 | 91 | 4 | 3 | 170 | 2 | 187 | 7.79e-29 | 112 |
| Msa0054730 | AT4G26870.1 | 42.262 | 168 | 90 | 5 | 28 | 194 | 23 | 184 | 6.15e-25 | 101 |
Find 59 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCAGCCGCTCCTATTAA+AGG | 0.200895 | 1_2:-9445741 | Msa0054730:CDS |
| CTTTGCGGCATCCTTCTTGC+AGG | 0.276045 | 1_2:+9446145 | None:intergenic |
| TTCTTAGTCATCAGAGAAAA+TGG | 0.279492 | 1_2:-9445879 | Msa0054730:CDS |
| GATCCCCTTGCTGTCAATTA+TGG | 0.290000 | 1_2:-9446053 | Msa0054730:CDS |
| TGTTGTGAGGCACCTTTAAT+AGG | 0.308209 | 1_2:+9445729 | None:intergenic |
| CACCGTACAGTGCTTGGTTC+AGG | 0.346864 | 1_2:-9445853 | Msa0054730:CDS |
| GTCCAGTCGTTGACATTGAC+AGG | 0.393463 | 1_2:+9445996 | None:intergenic |
| AGGTGGCGGCGGCAACTTCT+CGG | 0.397158 | 1_2:+9446105 | None:intergenic |
| GTTATGATATCTTGTTACTT+AGG | 0.401643 | 1_2:-9445701 | Msa0054730:CDS |
| CAAGAAGGATGCCGCAAAGC+TGG | 0.416596 | 1_2:-9446141 | Msa0054730:CDS |
| CATTGACAGGGGTCTTCGAT+TGG | 0.443151 | 1_2:+9446009 | None:intergenic |
| ATCTGCGGACTCACTAAATC+AGG | 0.450583 | 1_2:+9445825 | None:intergenic |
| AACGCCATCTTCTTCCCAAC+TGG | 0.452718 | 1_2:+9445900 | None:intergenic |
| GCCCTCCCACGGATTAGAAC+CGG | 0.456675 | 1_2:+9445936 | None:intergenic |
| TATTAAAGGTGCCTCACAAC+AGG | 0.473545 | 1_2:-9445727 | Msa0054730:CDS |
| TTTGTGAGTTGTGATTGTTT+AGG | 0.489001 | 1_2:-9445645 | Msa0054730:CDS |
| TGAGGCTCTCAATGATTCAC+TGG | 0.499024 | 1_2:-9445967 | Msa0054730:CDS |
| TGGTTTCACCGTACAGTGCT+TGG | 0.499781 | 1_2:-9445859 | Msa0054730:CDS |
| TTTAATAGGAGCGGCTGGAA+TGG | 0.513685 | 1_2:+9445743 | None:intergenic |
| GAGTCTATTGTCGATGTCGA+AGG | 0.513770 | 1_2:-9445774 | Msa0054730:CDS |
| GCACCTTTAATAGGAGCGGC+TGG | 0.516328 | 1_2:+9445738 | None:intergenic |
| CACAAGCTATTCGACCAGTT+GGG | 0.517268 | 1_2:-9445914 | Msa0054730:CDS |
| GCACAAGCTATTCGACCAGT+TGG | 0.517849 | 1_2:-9445915 | Msa0054730:CDS |
| GAATAGCTTGTGCCCTCCCA+CGG | 0.535699 | 1_2:+9445925 | None:intergenic |
| CGATGTAGCAGAGGTGGCGG+CGG | 0.543849 | 1_2:+9446094 | None:intergenic |
| AACAAGCCGGTTCTAATCCG+TGG | 0.547533 | 1_2:-9445942 | Msa0054730:CDS |
| CCCCTGTCAATGTCAACGAC+TGG | 0.551263 | 1_2:-9445998 | Msa0054730:CDS |
| TCGATTGGAGCTCAATGAGC+GGG | 0.557785 | 1_2:+9446024 | None:intergenic |
| AGTCGATGTAGCAGAGGTGG+CGG | 0.572655 | 1_2:+9446091 | None:intergenic |
| TCGACCAGTTGGGAAGAAGA+TGG | 0.581394 | 1_2:-9445904 | Msa0054730:CDS |
| AGACTCACGGCTGAGAGCGG+CGG | 0.581736 | 1_2:+9445791 | None:intergenic |
| AATCATTGAGAGCCTCAACT+CGG | 0.583678 | 1_2:+9445973 | None:intergenic |
| GAGAGTCGATGTAGCAGAGG+TGG | 0.585897 | 1_2:+9446088 | None:intergenic |
| TCCAGTCGTTGACATTGACA+GGG | 0.592334 | 1_2:+9445997 | None:intergenic |
| AGAGAGAGTCGATGTAGCAG+AGG | 0.593608 | 1_2:+9446085 | None:intergenic |
| TGATTTAGTGAGTCCGCAGA+TGG | 0.596877 | 1_2:-9445823 | Msa0054730:CDS |
| ATCATTGAGAGCCTCAACTC+GGG | 0.599803 | 1_2:+9445974 | None:intergenic |
| CAACGACTGGACCCGAGTTG+AGG | 0.600329 | 1_2:-9445985 | Msa0054730:CDS |
| TCAAGAGCCGACACTGTCAT+CGG | 0.603493 | 1_2:-9446195 | Msa0054730:CDS |
| GATCCTTCCGATGACAGTGT+CGG | 0.605021 | 1_2:+9446188 | None:intergenic |
| TGAGGCACCTTTAATAGGAG+CGG | 0.608618 | 1_2:+9445734 | None:intergenic |
| GCCGGTTCTAATCCGTGGGA+GGG | 0.610769 | 1_2:-9445937 | Msa0054730:CDS |
| TTCGATTGGAGCTCAATGAG+CGG | 0.611035 | 1_2:+9446023 | None:intergenic |
| TGATTCACTGGAGAACAAGC+CGG | 0.613416 | 1_2:-9445955 | Msa0054730:CDS |
| GCGGCAAATTTCACCATCTG+CGG | 0.614321 | 1_2:+9445810 | None:intergenic |
| ATACCATAATTGACAGCAAG+GGG | 0.614733 | 1_2:+9446050 | None:intergenic |
| ACAAGCCGGTTCTAATCCGT+GGG | 0.615482 | 1_2:-9445941 | Msa0054730:CDS |
| TATTGTCGATGTCGAAGGTG+TGG | 0.616371 | 1_2:-9445769 | Msa0054730:CDS |
| AATAGACTCACGGCTGAGAG+CGG | 0.623488 | 1_2:+9445788 | None:intergenic |
| AGCCGGTTCTAATCCGTGGG+AGG | 0.623958 | 1_2:-9445938 | Msa0054730:CDS |
| GAGCCGACACTGTCATCGGA+AGG | 0.625324 | 1_2:-9446191 | Msa0054730:CDS |
| CAATACCATAATTGACAGCA+AGG | 0.634292 | 1_2:+9446048 | None:intergenic |
| TGCCTGAACCAAGCACTGTA+CGG | 0.635520 | 1_2:+9445851 | None:intergenic |
| ATCATAACCAACCTGTTGTG+AGG | 0.639858 | 1_2:+9445716 | None:intergenic |
| AAAGGTGCCTCACAACAGGT+TGG | 0.643312 | 1_2:-9445723 | Msa0054730:CDS |
| CGACATCGACAATAGACTCA+CGG | 0.651944 | 1_2:+9445778 | None:intergenic |
| AATACCATAATTGACAGCAA+GGG | 0.690003 | 1_2:+9446049 | None:intergenic |
| TGGCGGCGGCAACTTCTCGG+CGG | 0.706873 | 1_2:+9446108 | None:intergenic |
| CCAGTCGTTGACATTGACAG+GGG | 0.731951 | 1_2:+9445998 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATCAGAAACAAAAAGCAAAA+AGG | - | chr1_2:9445682-9445701 | Msa0054730:CDS | 25.0% |
| !! | GTTATGATATCTTGTTACTT+AGG | - | chr1_2:9446149-9446168 | Msa0054730:CDS | 25.0% |
| AATACCATAATTGACAGCAA+GGG | + | chr1_2:9445804-9445823 | None:intergenic | 30.0% | |
| TTCTTAGTCATCAGAGAAAA+TGG | - | chr1_2:9445971-9445990 | Msa0054730:CDS | 30.0% | |
| TTTGTGAGTTGTGATTGTTT+AGG | - | chr1_2:9446205-9446224 | Msa0054730:CDS | 30.0% | |
| ATACCATAATTGACAGCAAG+GGG | + | chr1_2:9445803-9445822 | None:intergenic | 35.0% | |
| CAATACCATAATTGACAGCA+AGG | + | chr1_2:9445805-9445824 | None:intergenic | 35.0% | |
| AATCATTGAGAGCCTCAACT+CGG | + | chr1_2:9445880-9445899 | None:intergenic | 40.0% | |
| ! | TGTTGTGAGGCACCTTTAAT+AGG | + | chr1_2:9446124-9446143 | None:intergenic | 40.0% |
| !! | TATTAAAGGTGCCTCACAAC+AGG | - | chr1_2:9446123-9446142 | Msa0054730:CDS | 40.0% |
| ATCATAACCAACCTGTTGTG+AGG | + | chr1_2:9446137-9446156 | None:intergenic | 40.0% | |
| AAGCAAAAAGGCCTGCAAGA+AGG | - | chr1_2:9445694-9445713 | Msa0054730:CDS | 45.0% | |
| ! | GATCCCCTTGCTGTCAATTA+TGG | - | chr1_2:9445797-9445816 | Msa0054730:CDS | 45.0% |
| TTCGATTGGAGCTCAATGAG+CGG | + | chr1_2:9445830-9445849 | None:intergenic | 45.0% | |
| TCCAGTCGTTGACATTGACA+GGG | + | chr1_2:9445856-9445875 | None:intergenic | 45.0% | |
| ATCATTGAGAGCCTCAACTC+GGG | + | chr1_2:9445879-9445898 | None:intergenic | 45.0% | |
| TGAGGCTCTCAATGATTCAC+TGG | - | chr1_2:9445883-9445902 | Msa0054730:CDS | 45.0% | |
| TGATTCACTGGAGAACAAGC+CGG | - | chr1_2:9445895-9445914 | Msa0054730:CDS | 45.0% | |
| CACAAGCTATTCGACCAGTT+GGG | - | chr1_2:9445936-9445955 | Msa0054730:CDS | 45.0% | |
| ATCTGCGGACTCACTAAATC+AGG | + | chr1_2:9446028-9446047 | None:intergenic | 45.0% | |
| TGATTTAGTGAGTCCGCAGA+TGG | - | chr1_2:9446027-9446046 | Msa0054730:CDS | 45.0% | |
| CGACATCGACAATAGACTCA+CGG | + | chr1_2:9446075-9446094 | None:intergenic | 45.0% | |
| GAGTCTATTGTCGATGTCGA+AGG | - | chr1_2:9446076-9446095 | Msa0054730:CDS | 45.0% | |
| TATTGTCGATGTCGAAGGTG+TGG | - | chr1_2:9446081-9446100 | Msa0054730:CDS | 45.0% | |
| TTTAATAGGAGCGGCTGGAA+TGG | + | chr1_2:9446110-9446129 | None:intergenic | 45.0% | |
| ATTCCAGCCGCTCCTATTAA+AGG | - | chr1_2:9446109-9446128 | Msa0054730:CDS | 45.0% | |
| ! | TGAGGCACCTTTAATAGGAG+CGG | + | chr1_2:9446119-9446138 | None:intergenic | 45.0% |
| TCAAGAGCCGACACTGTCAT+CGG | - | chr1_2:9445655-9445674 | Msa0054730:CDS | 50.0% | |
| GATCCTTCCGATGACAGTGT+CGG | + | chr1_2:9445665-9445684 | None:intergenic | 50.0% | |
| !!! | GCGTTGCTTTTCCAGCTTTG+CGG | + | chr1_2:9445723-9445742 | None:intergenic | 50.0% |
| AGAGAGAGTCGATGTAGCAG+AGG | + | chr1_2:9445768-9445787 | None:intergenic | 50.0% | |
| TCGATTGGAGCTCAATGAGC+GGG | + | chr1_2:9445829-9445848 | None:intergenic | 50.0% | |
| CATTGACAGGGGTCTTCGAT+TGG | + | chr1_2:9445844-9445863 | None:intergenic | 50.0% | |
| CCAGTCGTTGACATTGACAG+GGG | + | chr1_2:9445855-9445874 | None:intergenic | 50.0% | |
| GTCCAGTCGTTGACATTGAC+AGG | + | chr1_2:9445857-9445876 | None:intergenic | 50.0% | |
| ! | AACAAGCCGGTTCTAATCCG+TGG | - | chr1_2:9445908-9445927 | Msa0054730:CDS | 50.0% |
| ! | ACAAGCCGGTTCTAATCCGT+GGG | - | chr1_2:9445909-9445928 | Msa0054730:CDS | 50.0% |
| GCACAAGCTATTCGACCAGT+TGG | - | chr1_2:9445935-9445954 | Msa0054730:CDS | 50.0% | |
| TCGACCAGTTGGGAAGAAGA+TGG | - | chr1_2:9445946-9445965 | Msa0054730:CDS | 50.0% | |
| AACGCCATCTTCTTCCCAAC+TGG | + | chr1_2:9445953-9445972 | None:intergenic | 50.0% | |
| TGGTTTCACCGTACAGTGCT+TGG | - | chr1_2:9445991-9446010 | Msa0054730:CDS | 50.0% | |
| ! | TGCCTGAACCAAGCACTGTA+CGG | + | chr1_2:9446002-9446021 | None:intergenic | 50.0% |
| GCGGCAAATTTCACCATCTG+CGG | + | chr1_2:9446043-9446062 | None:intergenic | 50.0% | |
| AATAGACTCACGGCTGAGAG+CGG | + | chr1_2:9446065-9446084 | None:intergenic | 50.0% | |
| !! | AAAGGTGCCTCACAACAGGT+TGG | - | chr1_2:9446127-9446146 | Msa0054730:CDS | 50.0% |
| CTTTGCGGCATCCTTCTTGC+AGG | + | chr1_2:9445708-9445727 | None:intergenic | 55.0% | |
| CAAGAAGGATGCCGCAAAGC+TGG | - | chr1_2:9445709-9445728 | Msa0054730:CDS | 55.0% | |
| AGTCGATGTAGCAGAGGTGG+CGG | + | chr1_2:9445762-9445781 | None:intergenic | 55.0% | |
| GAGAGTCGATGTAGCAGAGG+TGG | + | chr1_2:9445765-9445784 | None:intergenic | 55.0% | |
| CCCCTGTCAATGTCAACGAC+TGG | - | chr1_2:9445852-9445871 | Msa0054730:CDS | 55.0% | |
| ! | GAATAGCTTGTGCCCTCCCA+CGG | + | chr1_2:9445928-9445947 | None:intergenic | 55.0% |
| CACCGTACAGTGCTTGGTTC+AGG | - | chr1_2:9445997-9446016 | Msa0054730:CDS | 55.0% | |
| GCACCTTTAATAGGAGCGGC+TGG | + | chr1_2:9446115-9446134 | None:intergenic | 55.0% | |
| GAGCCGACACTGTCATCGGA+AGG | - | chr1_2:9445659-9445678 | Msa0054730:CDS | 60.0% | |
| CAACGACTGGACCCGAGTTG+AGG | - | chr1_2:9445865-9445884 | Msa0054730:CDS | 60.0% | |
| ! | AGCCGGTTCTAATCCGTGGG+AGG | - | chr1_2:9445912-9445931 | Msa0054730:CDS | 60.0% |
| ! | GCCGGTTCTAATCCGTGGGA+GGG | - | chr1_2:9445913-9445932 | Msa0054730:CDS | 60.0% |
| !! | GCCCTCCCACGGATTAGAAC+CGG | + | chr1_2:9445917-9445936 | None:intergenic | 60.0% |
| ! | AGGTGGCGGCGGCAACTTCT+CGG | + | chr1_2:9445748-9445767 | None:intergenic | 65.0% |
| ! | CGATGTAGCAGAGGTGGCGG+CGG | + | chr1_2:9445759-9445778 | None:intergenic | 65.0% |
| AGACTCACGGCTGAGAGCGG+CGG | + | chr1_2:9446062-9446081 | None:intergenic | 65.0% | |
| TGGCGGCGGCAACTTCTCGG+CGG | + | chr1_2:9445745-9445764 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 9445638 | 9446234 | 9445638 | ID=Msa0054730;Name=Msa0054730 |
| chr1_2 | mRNA | 9445638 | 9446234 | 9445638 | ID=Msa0054730-mRNA-1;Parent=Msa0054730;Name=Msa0054730-mRNA-1;_AED=0.53;_eAED=0.53;_QI=0|-1|0|1|-1|1|1|0|198 |
| chr1_2 | exon | 9445638 | 9446234 | 9445638 | ID=Msa0054730-mRNA-1:exon:3516;Parent=Msa0054730-mRNA-1 |
| chr1_2 | CDS | 9445638 | 9446234 | 9445638 | ID=Msa0054730-mRNA-1:cds;Parent=Msa0054730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
