AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0661000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0661000 MtrunA17_Chr4g0032331 89.451 455 24 3 1 432 1 454 0.0 817
Msa0661000 MtrunA17_Chr3g0112771 43.640 456 225 6 2 431 6 455 1.60e-127 376
Msa0661000 MtrunA17_Chr3g0112761 45.733 457 216 7 1 430 1 452 2.37e-122 363
Msa0661000 MtrunA17_Chr4g0050341 35.084 476 249 13 5 424 16 487 2.32e-82 261
Msa0661000 MtrunA17_Chr3g0092641 33.962 477 259 14 3 428 7 478 2.41e-79 253
Msa0661000 MtrunA17_Chr5g0426431 34.382 477 257 13 3 428 7 478 9.09e-79 252
Msa0661000 MtrunA17_Chr2g0278711 33.684 475 262 13 3 428 7 477 1.56e-75 243
Msa0661000 MtrunA17_Chr3g0118711 33.125 480 267 12 3 431 8 484 1.93e-75 243
Msa0661000 MtrunA17_Chr3g0118701 32.988 482 265 12 4 432 11 487 4.86e-75 242
Msa0661000 MtrunA17_Chr6g0454401 32.278 474 262 11 10 428 12 481 8.08e-75 241
Msa0661000 MtrunA17_Chr3g0118671 32.700 474 265 10 10 432 8 478 1.40e-74 241
Msa0661000 MtrunA17_Chr6g0454301 31.635 471 266 12 10 428 265 731 2.14e-73 244
Msa0661000 MtrunA17_Chr6g0454301 34.545 220 135 2 208 421 5 221 9.56e-43 160
Msa0661000 MtrunA17_Chr6g0454331 32.347 473 262 11 3 421 2 470 3.34e-73 237
Msa0661000 MtrunA17_Chr6g0454191 33.474 475 255 14 10 428 12 481 7.74e-73 236
Msa0661000 MtrunA17_Chr6g0453961 32.462 459 251 12 3 407 14 467 2.31e-72 235
Msa0661000 MtrunA17_Chr3g0118691 32.845 478 263 12 4 428 11 483 2.71e-72 235
Msa0661000 MtrunA17_Chr3g0078841 31.838 468 263 11 5 421 7 469 1.39e-71 233
Msa0661000 MtrunA17_Chr6g0454291 33.686 472 255 11 3 421 2 468 1.53e-71 233
Msa0661000 MtrunA17_Chr5g0412111 34.764 466 250 15 10 429 6 463 3.67e-71 231
Msa0661000 MtrunA17_Chr8g0359821 31.524 479 270 12 3 428 5 478 4.41e-71 232
Msa0661000 MtrunA17_Chr6g0454341 30.835 467 267 12 6 421 8 469 1.33e-70 231
Msa0661000 MtrunA17_Chr6g0454131 32.568 479 266 14 3 428 5 479 3.89e-70 229
Msa0661000 MtrunA17_Chr3g0118771 31.381 478 274 10 6 432 19 493 1.07e-69 228
Msa0661000 MtrunA17_Chr7g0217881 32.903 465 252 12 10 428 12 462 1.64e-69 227
Msa0661000 MtrunA17_Chr6g0454321 31.707 451 252 12 6 405 8 453 3.06e-69 231
Msa0661000 MtrunA17_Chr6g0453951 32.278 474 261 12 10 428 59 527 5.01e-69 228
Msa0661000 MtrunA17_Chr6g0454261 31.423 471 265 13 4 421 6 471 5.08e-69 226
Msa0661000 MtrunA17_Chr6g0454201 33.978 465 250 13 10 421 12 472 2.33e-68 225
Msa0661000 MtrunA17_Chr6g0454141 30.149 471 273 10 3 421 5 471 2.39e-68 224
Msa0661000 MtrunA17_Chr5g0412131 34.316 475 241 14 10 429 13 471 2.83e-67 221
Msa0661000 MtrunA17_Chr5g0423981 32.624 423 248 11 10 407 12 422 3.42e-67 221
Msa0661000 MtrunA17_Chr3g0118661 31.368 475 263 9 6 425 11 477 8.22e-67 221
Msa0661000 MtrunA17_Chr6g0454181 31.183 465 262 11 10 421 12 471 1.00e-66 220
Msa0661000 MtrunA17_Chr5g0412101 33.543 477 264 15 1 429 1 472 1.23e-66 220
Msa0661000 MtrunA17_Chr6g0452771 31.330 466 260 11 10 421 12 471 2.29e-66 219
Msa0661000 MtrunA17_Chr6g0454361 32.473 465 256 10 10 421 13 472 1.05e-65 218
Msa0661000 MtrunA17_Chr8g0336331 30.087 462 268 11 10 421 12 468 1.98e-65 217
Msa0661000 MtrunA17_Chr6g0454121 31.106 479 273 11 3 428 5 479 2.07e-65 217
Msa0661000 MtrunA17_Chr6g0454211 33.121 471 259 11 3 421 292 758 3.78e-65 223
Msa0661000 MtrunA17_Chr6g0454211 31.365 271 132 9 96 347 1 236 1.42e-29 121
Msa0661000 MtrunA17_Chr6g0454151 30.769 481 275 13 4 431 6 481 6.46e-64 213
Msa0661000 MtrunA17_Chr6g0454351 30.998 471 249 13 10 427 14 461 2.85e-62 208
Msa0661000 MtrunA17_Chr3g0118751 30.335 478 250 13 6 432 4 449 1.98e-59 200
Msa0661000 MtrunA17_Chr7g0250001 32.143 448 249 16 7 416 6 436 9.44e-59 199
Msa0661000 MtrunA17_Chr5g0414331 32.473 465 252 17 10 432 14 458 6.40e-56 191
Msa0661000 MtrunA17_Chr5g0426401 34.076 314 185 8 132 431 9 314 7.99e-55 184
Msa0661000 MtrunA17_Chr6g0464921 31.410 468 245 16 1 416 1 444 1.54e-54 187
Msa0661000 MtrunA17_Chr3g0118721 37.586 290 164 7 153 428 4 290 1.55e-54 183
Msa0661000 MtrunA17_Chr5g0414321 31.906 467 250 19 10 431 12 455 4.49e-54 186
Msa0661000 MtrunA17_Chr6g0464881 30.851 470 247 15 1 418 1 444 5.54e-53 184
Msa0661000 MtrunA17_Chr6g0454221 40.090 222 123 3 207 421 4 222 8.85e-53 179
Msa0661000 MtrunA17_Chr8g0361371 30.977 481 261 19 1 424 1 467 1.66e-52 182
Msa0661000 MtrunA17_Chr7g0232391 41.313 259 132 7 183 424 207 462 3.38e-52 182
Msa0661000 MtrunA17_Chr6g0454251 33.504 391 204 11 10 348 9 395 6.98e-52 179
Msa0661000 MtrunA17_Chr8g0355011 30.595 353 199 6 87 430 46 361 8.37e-52 178
Msa0661000 MtrunA17_Chr1g0207981 28.903 474 283 12 2 428 7 473 8.74e-52 181
Msa0661000 MtrunA17_Chr6g0454271 34.767 279 168 5 153 421 4 278 9.67e-52 176
Msa0661000 MtrunA17_Chr1g0207861 30.444 473 278 14 1 427 1 468 2.02e-51 180
Msa0661000 MtrunA17_Chr1g0207931 28.480 467 240 12 1 427 85 497 3.26e-51 180
Msa0661000 MtrunA17_Chr7g0249981 28.846 468 263 17 7 430 25 466 3.39e-51 179
Msa0661000 MtrunA17_Chr8g0380531 29.476 458 272 13 8 427 10 454 4.66e-51 178
Msa0661000 MtrunA17_Chr4g0053501 29.936 471 282 13 2 431 5 468 2.61e-50 177
Msa0661000 MtrunA17_Chr1g0161351 29.769 477 284 13 2 432 31 502 3.24e-50 177
Msa0661000 MtrunA17_Chr3g0098111 30.258 466 274 14 8 427 9 469 8.79e-50 176
Msa0661000 MtrunA17_Chr5g0431441 30.472 466 260 16 9 428 19 466 1.25e-49 175
Msa0661000 MtrunA17_Chr6g0459311 30.022 463 269 15 9 424 14 468 2.08e-49 174
Msa0661000 MtrunA17_Chr8g0377921 30.042 476 267 17 7 429 3 465 2.44e-49 174
Msa0661000 MtrunA17_Chr4g0044511 29.299 471 260 17 18 429 50 506 2.52e-49 175
Msa0661000 MtrunA17_Chr3g0122001 30.515 485 256 17 7 427 485 952 6.44e-49 179
Msa0661000 MtrunA17_Chr3g0122001 30.995 442 233 14 7 397 5 425 4.76e-48 176
Msa0661000 MtrunA17_Chr7g0232411 39.382 259 137 7 183 424 207 462 6.75e-49 173
Msa0661000 MtrunA17_Chr1g0207971 28.178 472 275 17 1 427 1 453 7.67e-49 172
Msa0661000 MtrunA17_Chr7g0249931 31.860 430 239 15 1 393 34 446 9.16e-49 173
Msa0661000 MtrunA17_Chr8g0365811 28.838 482 272 15 3 427 490 957 1.01e-48 178
Msa0661000 MtrunA17_Chr8g0365811 29.955 444 250 16 9 399 10 445 1.37e-46 172
Msa0661000 MtrunA17_Chr6g0486251 37.500 288 155 8 156 424 180 461 1.67e-48 172
Msa0661000 MtrunA17_Chr6g0486201 37.500 288 155 8 156 424 180 461 1.67e-48 172
Msa0661000 MtrunA17_Chr3g0121991 32.265 468 248 21 7 416 78 534 1.83e-48 173
Msa0661000 MtrunA17_Chr6g0454171 32.523 329 177 9 103 421 8 301 4.10e-48 167
Msa0661000 MtrunA17_Chr1g0207951 30.621 467 263 15 8 427 656 1108 5.15e-48 176
Msa0661000 MtrunA17_Chr1g0207951 29.870 462 265 17 9 427 125 570 2.14e-46 171
Msa0661000 MtrunA17_Chr7g0232341 35.766 274 153 7 169 424 195 463 5.89e-48 170
Msa0661000 MtrunA17_Chr8g0373301 34.435 363 202 12 87 424 112 463 6.89e-48 170
Msa0661000 MtrunA17_Chr7g0218791 29.234 431 244 12 15 404 12 422 9.98e-48 169
Msa0661000 MtrunA17_Chr8g0339631 34.167 360 205 12 87 421 110 462 2.37e-47 169
Msa0661000 MtrunA17_Chr5g0401721 28.601 479 283 15 1 428 1 471 3.56e-47 168
Msa0661000 MtrunA17_Chr8g0366391 28.455 492 280 18 1 431 1 481 1.18e-46 167
Msa0661000 MtrunA17_Chr8g0339451 33.889 360 207 8 87 420 102 456 1.28e-46 167
Msa0661000 MtrunA17_Chr8g0377941 29.515 454 243 15 7 405 6 437 1.41e-46 167
Msa0661000 MtrunA17_Chr4g0053321 28.033 478 270 13 8 431 26 483 1.97e-46 167
Msa0661000 MtrunA17_Chr7g0232331 35.385 260 147 6 183 424 207 463 3.69e-46 166
Msa0661000 MtrunA17_Chr8g0339601 35.738 305 160 9 130 414 27 315 4.14e-46 162
Msa0661000 MtrunA17_Chr8g0334831 29.253 482 262 20 9 424 7 475 4.90e-46 166
Msa0661000 MtrunA17_Chr8g0335161 38.911 257 136 6 183 423 211 462 1.49e-45 164
Msa0661000 MtrunA17_Chr7g0218831 28.837 430 255 12 8 404 6 417 1.65e-45 163
Msa0661000 MtrunA17_Chr6g0464861 30.000 450 251 18 1 406 1 430 1.82e-45 163
Msa0661000 MtrunA17_Chr7g0218811 28.477 453 275 14 8 428 15 450 1.88e-45 163
Msa0661000 MtrunA17_Chr8g0335141 30.670 463 265 15 9 423 10 464 2.71e-45 163
Msa0661000 MtrunA17_Chr4g0066221 27.743 483 281 14 1 424 4 477 3.35e-45 163
Msa0661000 MtrunA17_Chr7g0265151 29.091 495 273 20 1 428 1 484 5.66e-45 162
Msa0661000 MtrunA17_Chr1g0153451 32.320 362 207 9 89 424 111 460 1.17e-44 161
Msa0661000 MtrunA17_Chr7g0218841 28.205 429 260 12 8 404 6 418 1.37e-44 160
Msa0661000 MtrunA17_Chr8g0347281 29.363 487 255 18 1 420 1 465 4.12e-44 160
Msa0661000 MtrunA17_Chr6g0462531 28.814 472 266 18 10 425 5 462 4.23e-44 160
Msa0661000 MtrunA17_Chr8g0339461 33.867 375 189 15 87 421 110 465 4.70e-44 160
Msa0661000 MtrunA17_Chr7g0232401 30.749 387 229 10 53 420 94 460 5.93e-44 160
Msa0661000 MtrunA17_Chr8g0347271 30.044 456 267 15 9 420 19 466 7.42e-44 159
Msa0661000 MtrunA17_Chr5g0440421 29.191 507 268 18 2 430 3 496 7.74e-44 160
Msa0661000 MtrunA17_Chr6g0449931 33.058 363 194 12 86 420 109 450 1.11e-43 159
Msa0661000 MtrunA17_Chr6g0463861 28.842 475 276 15 7 430 13 476 2.81e-43 158
Msa0661000 MtrunA17_Chr5g0442561 28.632 475 285 14 6 429 3 474 3.21e-43 157
Msa0661000 MtrunA17_Chr4g0044521 28.298 470 263 17 18 431 19 470 4.52e-43 157
Msa0661000 MtrunA17_Chr6g0462541 31.928 332 200 8 90 405 118 439 5.08e-43 157
Msa0661000 MtrunA17_Chr2g0329111 29.747 474 265 16 6 422 4 466 8.04e-43 157
Msa0661000 MtrunA17_Chr7g0218821 27.896 423 236 13 9 387 6 403 8.40e-43 156
Msa0661000 MtrunA17_Chr5g0401851 27.364 497 287 15 1 432 1 488 9.08e-43 157
Msa0661000 MtrunA17_Chr6g0464841 29.399 449 256 17 1 406 1 431 1.02e-42 156
Msa0661000 MtrunA17_Chr4g0066201 28.903 474 260 19 8 424 18 471 1.51e-42 156
Msa0661000 MtrunA17_Chr1g0207831 28.059 474 269 16 8 427 8 463 1.51e-42 156
Msa0661000 MtrunA17_Chr4g0014061 27.061 473 275 15 17 432 18 477 2.38e-42 155
Msa0661000 MtrunA17_Chr5g0431361 28.798 441 261 12 15 418 19 443 3.37e-42 154
Msa0661000 MtrunA17_Chr6g0463851 28.660 485 276 16 1 424 4 479 4.00e-42 155
Msa0661000 MtrunA17_Chr1g0159551 30.370 405 242 16 43 427 75 459 4.14e-42 154
Msa0661000 MtrunA17_Chr8g0339441 43.204 206 98 4 234 420 217 422 6.41e-42 153
Msa0661000 MtrunA17_Chr8g0336731 32.203 354 207 10 96 424 142 487 1.05e-41 154
Msa0661000 MtrunA17_Chr8g0336691 30.318 409 253 12 39 423 975 1375 1.31e-41 157
Msa0661000 MtrunA17_Chr8g0336691 33.151 365 205 11 87 423 116 469 5.85e-41 155
Msa0661000 MtrunA17_Chr8g0336691 29.310 406 229 14 39 421 536 906 1.80e-35 139
Msa0661000 MtrunA17_Chr4g0072771 28.861 395 243 12 49 429 97 467 1.64e-41 153
Msa0661000 MtrunA17_Chr5g0448551 29.002 431 237 14 9 389 8 419 2.49e-41 152
Msa0661000 MtrunA17_Chr5g0419771 29.620 395 232 12 18 370 46 436 3.26e-41 153
Msa0661000 MtrunA17_Chr6g0464871 28.634 454 253 16 1 406 13 443 3.27e-41 152
Msa0661000 MtrunA17_Chr4g0066261 29.424 486 255 20 7 424 13 478 5.56e-41 152
Msa0661000 MtrunA17_Chr1g0173121 27.696 473 263 18 9 427 15 462 5.95e-41 151
Msa0661000 MtrunA17_Chr4g0066151 29.863 365 215 15 89 424 124 476 8.68e-41 151
Msa0661000 MtrunA17_Chr5g0428081 28.398 493 276 16 1 430 4 482 9.89e-41 151
Msa0661000 MtrunA17_Chr6g0462521 30.571 350 215 10 90 425 113 448 9.93e-41 150
Msa0661000 MtrunA17_Chr6g0462551 30.000 330 211 7 90 405 117 440 2.04e-40 150
Msa0661000 MtrunA17_Chr8g0370941 29.713 488 266 19 9 427 9 488 2.10e-40 150
Msa0661000 MtrunA17_Chr8g0336651 29.767 430 226 14 39 421 837 1237 2.47e-40 154
Msa0661000 MtrunA17_Chr8g0336651 32.024 331 194 9 99 406 119 441 2.61e-38 148
Msa0661000 MtrunA17_Chr8g0336651 34.091 264 137 8 169 423 535 770 5.78e-33 132
Msa0661000 MtrunA17_Chr4g0066131 27.158 475 266 18 18 431 23 478 2.62e-40 150
Msa0661000 MtrunA17_Chr4g0072761 28.610 374 230 9 62 421 94 444 5.00e-40 149
Msa0661000 MtrunA17_Chr6g0462571 30.086 349 215 10 95 425 119 456 5.39e-40 149
Msa0661000 MtrunA17_Chr8g0382021 30.809 383 223 14 47 408 106 467 5.48e-40 149
Msa0661000 MtrunA17_Chr5g0419761 28.037 428 232 15 1 370 1 410 5.69e-40 149
Msa0661000 MtrunA17_Chr7g0243681 27.310 487 289 17 1 430 1 479 6.49e-40 149
Msa0661000 MtrunA17_Chr7g0265141 26.775 493 270 17 1 419 1 476 1.44e-39 148
Msa0661000 MtrunA17_Chr5g0393591 25.974 462 255 12 9 427 18 435 1.51e-39 147
Msa0661000 MtrunA17_Chr8g0334861 32.242 397 228 16 59 424 74 460 1.95e-39 147
Msa0661000 MtrunA17_Chr5g0448521 27.917 480 273 16 8 429 5 469 2.24e-39 147
Msa0661000 MtrunA17_Chr4g0066281 26.931 479 261 19 8 424 12 463 2.55e-39 147
Msa0661000 MtrunA17_Chr7g0275511 29.530 447 256 17 9 406 16 452 2.60e-39 147
Msa0661000 MtrunA17_Chr8g0336741 31.322 348 212 9 99 424 126 468 7.89e-39 145
Msa0661000 MtrunA17_Chr7g0232311 31.884 345 205 10 102 424 124 460 9.50e-39 145
Msa0661000 MtrunA17_Chr7g0249961 36.715 207 112 4 210 405 37 235 2.23e-38 140
Msa0661000 MtrunA17_Chr6g0454371 39.130 161 95 1 261 421 5 162 2.77e-38 136
Msa0661000 MtrunA17_Chr7g0243631 26.680 491 294 15 1 430 1 486 3.40e-38 144
Msa0661000 MtrunA17_Chr5g0442581 27.064 436 272 11 30 428 51 477 3.75e-38 145
Msa0661000 MtrunA17_Chr5g0420801 28.958 480 273 18 3 432 2 463 4.55e-38 143
Msa0661000 MtrunA17_Chr5g0442541 30.133 375 219 12 87 428 102 466 5.56e-38 143
Msa0661000 MtrunA17_Chr7g0243931 26.815 496 285 17 1 430 7 490 6.28e-38 144
Msa0661000 MtrunA17_Chr8g0374901 28.000 475 272 16 7 424 14 475 9.99e-38 143
Msa0661000 MtrunA17_Chr2g0294931 27.778 468 267 16 18 424 21 478 1.25e-37 143
Msa0661000 MtrunA17_Chr7g0275681 27.861 402 226 12 17 370 21 406 2.53e-37 142
Msa0661000 MtrunA17_Chr3g0079731 28.247 485 267 16 9 425 7 478 2.55e-37 142
Msa0661000 MtrunA17_Chr4g0011051 27.273 484 258 18 9 416 10 475 2.81e-37 142
Msa0661000 MtrunA17_Chr7g0243951 26.866 469 267 16 1 404 1 458 3.13e-37 142
Msa0661000 MtrunA17_Chr7g0265041 26.132 486 269 16 9 421 12 480 4.59e-37 141
Msa0661000 MtrunA17_Chr5g0416741 27.100 369 241 9 89 432 123 488 5.37e-37 141
Msa0661000 MtrunA17_Chr4g0044481 26.044 407 232 10 2 370 22 397 6.34e-37 139
Msa0661000 MtrunA17_Chr5g0403641 32.841 271 149 7 183 425 235 500 7.75e-37 141
Msa0661000 MtrunA17_Chr4g0044501 26.899 487 290 15 1 430 1 478 9.34e-37 140
Msa0661000 MtrunA17_Chr8g0374941 26.957 460 270 13 7 411 478 926 9.60e-37 143
Msa0661000 MtrunA17_Chr8g0374941 27.941 476 273 18 7 424 951 1414 1.29e-35 140
Msa0661000 MtrunA17_Chr8g0374941 26.427 473 276 17 7 423 13 469 3.44e-35 139
Msa0661000 MtrunA17_Chr2g0294921 28.000 475 269 16 18 430 170 633 1.72e-36 141
Msa0661000 MtrunA17_Chr8g0374931 27.673 477 269 16 1 411 4 470 3.93e-36 139
Msa0661000 MtrunA17_Chr7g0243801 27.419 496 274 20 1 430 1 476 4.19e-36 138
Msa0661000 MtrunA17_Chr2g0294941 29.692 357 209 11 89 413 17 363 4.68e-36 136
Msa0661000 MtrunA17_Chr7g0243771 27.530 494 275 19 1 430 1 475 4.89e-36 138
Msa0661000 MtrunA17_Chr7g0243781 26.789 489 288 16 1 430 1 478 5.50e-36 138
Msa0661000 MtrunA17_Chr5g0442491 27.603 413 257 13 49 429 74 476 5.73e-36 138
Msa0661000 MtrunA17_Chr8g0369341 28.778 483 267 20 10 432 8 473 6.97e-36 137
Msa0661000 MtrunA17_Chr7g0265101 25.000 488 294 14 9 431 10 490 7.11e-36 138
Msa0661000 MtrunA17_Chr3g0106231 26.667 450 283 13 10 428 19 452 2.11e-35 136
Msa0661000 MtrunA17_Chr2g0302991 27.719 469 281 17 5 425 2 460 3.08e-35 135
Msa0661000 MtrunA17_Chr1g0179901 25.435 460 270 15 18 414 26 475 3.53e-35 136
Msa0661000 MtrunA17_Chr5g0442521 28.030 396 245 12 65 429 91 477 3.81e-35 135
Msa0661000 MtrunA17_Chr5g0442601 28.418 373 230 11 87 429 512 877 4.07e-35 138
Msa0661000 MtrunA17_Chr5g0442601 28.707 317 187 9 68 370 42 333 6.20e-29 120
Msa0661000 MtrunA17_Chr7g0243871 26.559 497 280 19 1 432 1 477 4.80e-35 135
Msa0661000 MtrunA17_Chr6g0463891 28.346 381 243 10 77 430 110 487 5.73e-35 135
Msa0661000 MtrunA17_Chr4g0042931 29.032 434 251 15 18 405 17 439 9.86e-35 134
Msa0661000 MtrunA17_Chr4g0042891 28.667 450 261 17 18 418 17 455 1.96e-34 133
Msa0661000 MtrunA17_Chr5g0429711 27.254 477 272 18 8 431 11 465 3.40e-34 132
Msa0661000 MtrunA17_Chr1g0153461 40.107 187 98 3 234 406 3 189 4.23e-34 127
Msa0661000 MtrunA17_Chr4g0066171 25.527 474 287 16 8 430 21 479 8.03e-34 132
Msa0661000 MtrunA17_Chr8g0374971 27.176 471 279 16 9 424 16 477 8.67e-34 132
Msa0661000 MtrunA17_Chr5g0431371 27.416 445 271 11 9 418 11 438 9.15e-34 131
Msa0661000 MtrunA17_Chr5g0442511 25.957 470 277 13 6 427 47 493 1.03e-33 132
Msa0661000 MtrunA17_Chr7g0265051 27.540 374 235 11 88 431 121 488 1.06e-33 132
Msa0661000 MtrunA17_Chr5g0431401 31.783 258 152 5 184 429 205 450 1.50e-33 130
Msa0661000 MtrunA17_Chr5g0429681 26.749 486 280 24 2 431 38 503 1.68e-33 131
Msa0661000 MtrunA17_Chr2g0302961 26.526 475 282 14 5 425 2 463 1.86e-33 130
Msa0661000 MtrunA17_Chr8g0334851 29.201 363 208 12 87 416 112 458 2.14e-33 130
Msa0661000 MtrunA17_Chr5g0431421 31.395 258 153 4 184 429 205 450 2.62e-33 130
Msa0661000 MtrunA17_Chr7g0265111 26.582 474 281 14 18 429 49 517 4.31e-33 130
Msa0661000 MtrunA17_Chr7g0232351 39.773 176 91 5 183 347 207 378 4.90e-33 128
Msa0661000 MtrunA17_Chr7g0243861 27.419 496 263 19 9 430 15 487 1.08e-32 129
Msa0661000 MtrunA17_Chr5g0410941 29.032 372 222 13 89 427 127 489 2.16e-32 128
Msa0661000 MtrunA17_Chr5g0409591 26.033 484 270 14 17 427 13 481 2.28e-32 128
Msa0661000 MtrunA17_Chr8g0350881 31.507 292 170 7 159 424 190 477 2.90e-32 127
Msa0661000 MtrunA17_Chr5g0432731 28.477 302 184 10 147 430 12 299 2.93e-32 124
Msa0661000 MtrunA17_Chr7g0218311 28.451 355 221 11 89 416 124 472 4.05e-32 127
Msa0661000 MtrunA17_Chr8g0336261 40.458 131 75 1 261 391 5 132 5.59e-32 118
Msa0661000 MtrunA17_Chr7g0243711 36.937 222 115 8 228 430 101 316 7.49e-32 124
Msa0661000 MtrunA17_Chr7g0243851 32.847 274 152 9 183 430 175 442 8.34e-32 126
Msa0661000 MtrunA17_Chr7g0235051 32.787 244 140 7 183 404 187 428 1.86e-31 125
Msa0661000 MtrunA17_Chr7g0243761 26.730 419 249 13 1 370 1 410 1.10e-30 123
Msa0661000 MtrunA17_Chr3g0106251 27.273 286 187 4 145 421 12 285 1.64e-30 119
Msa0661000 MtrunA17_Chr7g0243611 33.333 210 129 5 169 370 65 271 7.06e-30 117
Msa0661000 MtrunA17_Chr4g0060511 32.927 246 138 7 183 404 220 462 8.42e-30 120
Msa0661000 MtrunA17_Chr7g0241781 26.351 444 257 17 1 409 1 409 1.89e-29 119
Msa0661000 MtrunA17_Chr1g0165701 27.778 378 224 15 90 432 125 488 7.06e-29 118
Msa0661000 MtrunA17_Chr1g0207881 26.027 438 237 15 1 416 1 373 9.82e-29 116
Msa0661000 MtrunA17_Chr8g0355221 26.596 376 234 11 90 432 125 491 2.01e-28 117
Msa0661000 MtrunA17_Chr4g0069611 25.000 436 254 16 18 404 25 436 1.11e-27 114
Msa0661000 MtrunA17_Chr7g0243811 34.574 188 117 4 183 368 190 373 1.14e-27 113
Msa0661000 MtrunA17_Chr6g0466831 25.346 434 255 15 18 404 28 439 1.34e-27 114
Msa0661000 MtrunA17_Chr7g0243911 37.696 191 101 6 230 404 17 205 1.35e-27 109
Msa0661000 MtrunA17_Chr6g0466841 26.852 432 251 17 18 404 28 439 2.75e-27 113
Msa0661000 MtrunA17_Chr5g0416821 24.948 481 285 17 8 430 14 476 5.36e-27 112
Msa0661000 MtrunA17_Chr7g0241801 25.942 451 250 20 1 409 1 409 8.17e-27 111
Msa0661000 MtrunA17_Chr6g0454231 29.004 231 116 5 183 407 7 195 1.04e-26 112
Msa0661000 MtrunA17_Chr5g0431431 27.308 260 170 6 147 402 116 360 1.18e-26 110
Msa0661000 MtrunA17_Chr8g0361411 27.101 476 271 16 1 425 1 451 1.41e-26 111
Msa0661000 MtrunA17_Chr2g0307961 34.137 249 140 11 183 418 221 458 3.67e-26 110
Msa0661000 MtrunA17_Chr7g0231631 29.119 261 169 7 183 432 9 264 4.79e-25 103
Msa0661000 MtrunA17_Chr4g0039881 26.340 429 259 15 18 405 2 414 7.37e-25 106
Msa0661000 MtrunA17_Chr2g0302851 27.438 441 265 17 9 409 17 442 2.21e-24 105
Msa0661000 MtrunA17_Chr8g0367221 24.215 446 257 13 18 405 1298 1720 3.11e-24 106
Msa0661000 MtrunA17_Chr8g0367221 30.493 223 138 6 192 405 1016 1230 2.16e-21 97.4
Msa0661000 MtrunA17_Chr8g0367221 28.182 220 147 5 192 405 229 443 1.94e-20 94.7
Msa0661000 MtrunA17_Chr6g0482061 28.516 256 152 9 183 413 224 473 5.01e-24 103
Msa0661000 MtrunA17_Chr3g0079711 37.500 184 96 6 261 425 3 186 8.58e-24 98.2
Msa0661000 MtrunA17_Chr8g0337381 47.059 119 53 4 312 423 6 121 2.19e-22 92.4
Msa0661000 MtrunA17_Chr8g0336251 29.694 229 144 5 192 409 223 445 3.75e-22 98.6
Msa0661000 MtrunA17_Chr8g0336321 29.694 229 144 5 192 409 223 445 4.23e-22 98.2
Msa0661000 MtrunA17_Chr6g0453981 31.884 207 121 5 96 283 1 206 5.76e-22 94.0
Msa0661000 MtrunA17_Chr4g0066141 36.970 165 86 6 283 430 191 354 7.62e-22 96.3
Msa0661000 MtrunA17_Chr2g0278721 28.384 229 145 6 185 404 734 952 1.04e-21 98.2
Msa0661000 MtrunA17_Chr2g0278721 26.196 439 250 17 18 404 25 441 1.57e-21 97.8
Msa0661000 MtrunA17_Chr6g0453941 30.175 285 150 10 10 283 13 259 9.85e-21 91.7
Msa0661000 MtrunA17_Chr3g0092031 33.143 175 105 5 236 404 5 173 1.16e-20 89.7
Msa0661000 MtrunA17_Chr6g0464091 26.835 436 253 17 18 404 28 446 1.23e-20 94.0
Msa0661000 MtrunA17_Chr2g0278741 32.759 232 133 8 185 404 303 523 1.97e-20 93.6
Msa0661000 MtrunA17_Chr5g0427571 29.075 227 140 5 192 403 53 273 4.78e-20 90.1
Msa0661000 MtrunA17_Chr8g0357361 28.571 196 131 4 179 370 59 249 6.02e-20 89.4
Msa0661000 MtrunA17_Chr7g0250021 28.889 315 180 12 1 281 6 310 6.90e-20 90.1
Msa0661000 MtrunA17_Chr4g0029131 25.057 439 251 16 18 405 22 433 1.14e-19 91.7
Msa0661000 MtrunA17_Chr4g0040691 23.058 399 254 12 18 380 18 399 2.87e-17 83.6
Msa0661000 MtrunA17_Chr5g0426411 33.136 169 84 5 2 141 6 174 6.99e-17 78.2
Msa0661000 MtrunA17_Chr4g0040711 23.653 427 251 15 18 386 18 427 1.12e-16 82.0
Msa0661000 MtrunA17_Chr2g0283041 26.364 220 146 7 183 396 211 420 2.44e-16 80.9
Msa0661000 MtrunA17_Chr4g0029151 24.009 429 247 11 18 395 30 430 5.79e-16 79.7
Msa0661000 MtrunA17_Chr1g0196851 23.206 418 267 12 18 395 59 462 4.67e-15 77.0
Msa0661000 MtrunA17_Chr6g0454391 45.161 62 34 0 324 385 13 74 3.45e-14 68.9
Msa0661000 MtrunA17_Chr6g0454111 29.480 173 99 7 123 277 16 183 2.12e-11 62.8
Msa0661000 MtrunA17_Chr7g0243731 42.029 69 39 1 304 371 4 72 3.39e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0661000 AT3G46670.1 44.079 456 221 10 2 430 3 451 9.54e-122 362
Msa0661000 AT3G46660.1 44.565 460 215 10 2 430 8 458 1.94e-118 353
Msa0661000 AT5G59590.1 43.142 452 220 10 2 424 3 446 8.74e-118 352
Msa0661000 AT5G59580.1 41.921 458 229 9 2 431 3 451 1.60e-115 346
Msa0661000 AT5G38040.1 45.727 433 207 10 17 425 19 447 1.97e-113 340
Msa0661000 AT3G46680.1 43.304 448 221 11 4 424 5 446 7.00e-113 339
Msa0661000 AT3G46700.1 42.793 444 226 10 6 427 7 444 8.81e-113 338
Msa0661000 AT3G11340.1 42.232 457 227 9 1 430 1 447 1.12e-112 338
Msa0661000 AT5G38010.1 43.142 452 225 10 4 427 6 453 9.26e-112 336
Msa0661000 AT2G26480.1 42.667 450 229 12 3 428 2 446 3.89e-109 329
Msa0661000 AT5G05870.1 42.105 456 233 8 1 427 1 454 2.58e-108 328
Msa0661000 AT5G05880.1 41.447 456 236 6 1 430 1 451 2.76e-108 327
Msa0661000 AT3G46690.1 42.377 446 230 8 6 427 7 449 3.11e-108 327
Msa0661000 AT3G46720.1 42.667 450 214 10 6 427 7 440 9.75e-108 326
Msa0661000 AT3G46650.1 40.639 438 211 8 4 416 6 419 1.60e-106 322
Msa0661000 AT5G05860.1 40.708 452 241 8 2 430 3 450 4.46e-105 319
Msa0661000 AT5G05890.1 39.869 459 243 8 1 430 1 455 1.06e-102 313
Msa0661000 AT3G55700.1 38.612 461 246 11 1 431 1 454 6.95e-101 308
Msa0661000 AT3G55710.1 41.126 462 237 13 1 431 1 458 2.12e-99 305
Msa0661000 AT5G05900.1 40.611 458 230 9 1 427 1 447 7.92e-98 300
Msa0661000 AT1G22360.1 33.260 454 242 11 6 406 8 453 2.03e-79 254
Msa0661000 AT1G22400.1 33.259 448 245 10 6 403 11 454 6.22e-78 250
Msa0661000 AT1G22380.1 31.733 479 267 11 4 428 9 481 4.49e-76 245
Msa0661000 AT5G37950.1 41.954 348 174 10 23 347 1 343 2.79e-73 234
Msa0661000 AT1G22340.1 32.383 491 268 14 1 432 1 486 5.01e-73 237
Msa0661000 AT1G22360.2 32.379 454 244 12 6 406 8 451 2.42e-72 235
Msa0661000 AT1G22370.2 34.632 462 243 13 6 416 11 464 7.07e-72 234
Msa0661000 AT5G37950.2 41.159 345 175 9 23 347 1 337 3.77e-71 228
Msa0661000 AT1G78270.1 32.128 470 263 13 12 429 17 482 1.59e-65 218
Msa0661000 AT2G28080.1 29.039 458 266 13 12 423 22 466 1.27e-51 181
Msa0661000 AT2G36770.1 29.200 500 271 20 1 428 1 489 1.36e-51 181
Msa0661000 AT4G15500.1 30.652 460 235 15 1 406 3 432 1.71e-51 180
Msa0661000 AT3G50740.1 31.702 470 252 15 5 419 4 459 2.53e-51 180
Msa0661000 AT2G36780.1 28.911 505 270 16 1 430 1 491 2.06e-50 178
Msa0661000 AT1G05680.1 29.978 457 265 14 9 424 7 449 4.54e-50 176
Msa0661000 AT5G17050.1 28.051 467 282 16 3 430 8 459 9.27e-50 175
Msa0661000 AT2G36750.1 29.225 503 266 17 1 430 1 486 3.01e-49 175
Msa0661000 AT2G31790.1 28.541 466 278 14 1 424 1 453 4.26e-49 173
Msa0661000 AT4G15480.1 27.632 456 277 14 9 418 20 468 1.09e-48 173
Msa0661000 AT1G22370.1 38.408 289 151 8 147 416 14 294 4.52e-48 167
Msa0661000 AT2G36970.1 30.277 469 268 14 9 427 11 470 7.68e-48 171
Msa0661000 AT5G66690.1 31.169 462 257 18 5 416 4 454 1.94e-47 169
Msa0661000 AT5G17040.1 30.137 365 224 10 78 430 97 442 1.07e-46 167
Msa0661000 AT2G36760.1 30.176 454 254 17 9 404 15 463 1.26e-46 167
Msa0661000 AT2G23250.1 28.097 452 273 12 11 427 1 435 1.53e-46 166
Msa0661000 AT1G05675.1 29.011 455 272 14 9 424 7 449 1.94e-46 166
Msa0661000 AT5G26310.1 30.152 461 263 15 5 416 4 454 2.31e-46 167
Msa0661000 AT2G23260.1 28.416 461 283 16 2 427 5 453 1.40e-45 164
Msa0661000 AT4G14090.1 28.172 465 271 14 3 424 8 452 6.95e-45 162
Msa0661000 AT2G43820.1 28.416 461 255 15 6 419 5 437 8.13e-45 162
Msa0661000 AT3G21560.1 26.216 473 287 14 9 431 13 473 1.22e-44 162
Msa0661000 AT4G01070.1 27.926 487 256 17 2 421 3 461 1.25e-44 162
Msa0661000 AT5G17030.1 29.459 370 233 10 77 431 103 459 1.39e-44 161
Msa0661000 AT3G02100.1 27.273 473 273 15 6 429 11 461 1.40e-44 161
Msa0661000 AT4G15550.1 29.019 479 255 16 9 424 14 470 1.58e-44 162
Msa0661000 AT2G31750.1 27.803 446 258 14 1 405 1 423 1.58e-44 161
Msa0661000 AT4G15490.1 26.778 478 290 13 5 432 4 471 2.46e-44 161
Msa0661000 AT2G31750.2 27.803 446 258 14 1 405 1 423 4.37e-44 160
Msa0661000 AT2G43840.1 29.806 463 248 22 4 418 3 436 1.90e-43 158
Msa0661000 AT2G30140.1 28.850 461 280 11 4 431 10 455 2.30e-43 158
Msa0661000 AT1G24100.1 30.000 470 261 16 4 425 7 456 2.32e-43 158
Msa0661000 AT2G30140.2 28.913 460 280 11 4 431 10 454 3.20e-43 157
Msa0661000 AT2G43840.2 29.806 463 248 22 4 418 3 436 5.75e-43 157
Msa0661000 AT3G53160.1 28.000 475 268 16 9 419 9 473 1.61e-42 156
Msa0661000 AT2G36800.1 28.986 483 261 18 17 430 21 490 7.34e-42 155
Msa0661000 AT2G30150.2 28.419 468 270 18 5 430 11 455 2.23e-41 152
Msa0661000 AT2G30150.1 28.070 456 268 15 15 430 4 439 2.86e-41 152
Msa0661000 AT3G16520.3 30.328 366 207 17 87 425 113 457 3.56e-41 152
Msa0661000 AT1G05560.1 27.778 450 271 13 9 418 6 441 4.12e-41 152
Msa0661000 AT3G16520.1 29.330 358 207 16 87 419 113 449 7.60e-41 151
Msa0661000 AT1G05560.2 27.778 450 271 13 9 418 56 491 8.62e-41 152
Msa0661000 AT5G12890.1 31.250 416 247 14 36 420 67 474 9.07e-41 152
Msa0661000 AT1G30530.1 28.371 356 234 10 84 430 110 453 1.09e-40 150
Msa0661000 AT5G17040.2 33.600 250 154 5 184 430 100 340 1.43e-40 148
Msa0661000 AT5G03490.1 29.810 473 258 17 2 425 13 460 1.10e-39 148
Msa0661000 AT3G16520.2 30.581 327 186 14 87 389 113 422 1.11e-39 148
Msa0661000 AT2G36790.1 28.926 484 275 18 9 430 14 490 2.44e-39 148
Msa0661000 AT2G15490.3 29.348 368 227 12 86 431 122 478 6.01e-39 146
Msa0661000 AT4G34131.1 25.153 489 298 14 1 429 1 481 2.36e-38 145
Msa0661000 AT2G15490.1 28.841 371 228 12 86 431 122 481 1.07e-37 143
Msa0661000 AT1G01420.1 35.537 242 131 7 183 406 209 443 1.76e-37 142
Msa0661000 AT1G05530.1 27.332 461 283 14 9 428 6 455 1.80e-37 142
Msa0661000 AT1G01420.2 35.537 242 131 7 183 406 212 446 1.83e-37 142
Msa0661000 AT2G29740.1 28.184 479 275 17 1 424 1 465 1.87e-37 142
Msa0661000 AT4G34138.1 24.945 457 280 11 17 418 20 468 2.37e-37 142
Msa0661000 AT3G53150.1 28.224 411 244 12 6 370 20 425 7.62e-37 141
Msa0661000 AT4G34135.1 25.333 450 270 15 1 391 1 443 8.02e-37 140
Msa0661000 AT4G36770.1 26.906 446 262 14 11 405 7 439 1.23e-36 140
Msa0661000 AT1G10400.1 28.668 443 252 15 1 395 1 427 1.76e-36 139
Msa0661000 AT2G15480.1 24.400 500 290 17 1 431 1 481 3.56e-36 139
Msa0661000 AT3G21790.1 27.981 411 232 12 67 431 94 486 6.37e-36 138
Msa0661000 AT1G51210.1 28.966 435 235 16 15 404 27 432 8.00e-36 137
Msa0661000 AT4G15280.1 29.491 373 224 10 86 428 111 474 1.47e-35 137
Msa0661000 AT4G15280.2 29.491 373 224 10 86 428 143 506 1.50e-35 137
Msa0661000 AT2G15480.2 24.510 510 287 19 1 431 1 491 2.29e-35 137
Msa0661000 AT2G29730.1 26.216 473 287 17 9 431 6 466 2.83e-35 136
Msa0661000 AT2G18570.1 35.000 260 140 9 183 420 207 459 6.10e-35 135
Msa0661000 AT1G07250.1 29.132 357 196 10 67 389 101 434 7.08e-35 135
Msa0661000 AT2G29750.1 27.027 444 261 14 1 389 1 436 3.31e-34 133
Msa0661000 AT3G22250.1 26.872 454 266 16 1 405 1 437 3.65e-34 133
Msa0661000 AT3G21760.1 29.630 378 232 9 72 420 101 473 5.48e-34 133
Msa0661000 AT3G21780.1 27.932 469 279 16 9 425 5 466 1.04e-33 132
Msa0661000 AT4G15260.1 29.428 367 213 11 95 428 2 355 1.09e-33 130
Msa0661000 AT3G21800.1 28.321 399 245 14 64 427 87 479 1.86e-33 131
Msa0661000 AT2G18560.1 34.694 245 129 7 183 405 117 352 2.54e-33 129
Msa0661000 AT1G01390.1 36.992 246 127 8 183 408 209 446 5.35e-33 130
Msa0661000 AT1G01390.2 36.992 246 127 8 183 408 226 463 5.40e-33 130
Msa0661000 AT5G14860.1 27.181 493 271 20 1 425 1 473 2.81e-32 128
Msa0661000 AT1G07260.1 29.235 366 212 10 53 389 86 433 3.31e-32 127
Msa0661000 AT5G49690.1 28.571 441 241 14 18 409 20 435 4.84e-32 127
Msa0661000 AT2G29710.1 31.660 259 158 7 183 429 213 464 2.91e-31 125
Msa0661000 AT1G73880.1 25.210 476 284 19 10 432 15 471 3.22e-30 122
Msa0661000 AT3G21750.1 26.061 495 261 20 9 428 5 469 3.38e-29 119
Msa0661000 AT5G65550.1 25.285 439 264 13 18 408 19 441 7.62e-29 118
Msa0661000 AT1G07240.1 27.869 366 232 12 87 429 121 477 3.72e-28 116
Msa0661000 AT2G16890.2 26.392 485 277 19 1 425 1 465 2.18e-27 114
Msa0661000 AT2G16890.3 27.619 420 234 17 1 370 1 400 3.45e-26 110
Msa0661000 AT1G64910.1 25.597 293 195 8 90 380 111 382 3.58e-19 89.7
Msa0661000 AT4G27560.1 24.528 424 268 13 18 413 17 416 4.24e-19 89.7
Msa0661000 AT4G27570.1 24.821 419 259 14 18 404 17 411 1.69e-18 87.8
Msa0661000 AT2G22590.1 28.319 226 137 7 197 409 237 450 1.06e-17 85.5
Msa0661000 AT5G53990.1 23.834 386 252 11 18 380 16 382 1.30e-17 85.1
Msa0661000 AT5G54010.1 26.102 295 198 8 90 380 110 388 1.96e-17 84.7
Msa0661000 AT1G06000.1 25.054 467 265 21 3 424 4 430 5.34e-17 83.2
Msa0661000 AT1G64920.1 23.721 430 263 16 18 413 16 414 1.58e-16 81.6
Msa0661000 AT4G09500.2 23.095 420 273 13 18 405 16 417 1.11e-15 79.3
Msa0661000 AT4G01070.2 24.348 345 180 14 2 294 3 318 3.09e-14 73.9
Msa0661000 AT3G29630.1 24.830 294 201 7 90 381 110 385 7.52e-14 73.6
Msa0661000 AT4G34135.2 23.404 329 201 11 1 281 1 326 7.55e-14 72.8
Msa0661000 AT5G54060.1 25.445 393 225 15 18 363 23 394 1.40e-13 72.8
Msa0661000 AT1G50580.1 23.753 421 276 15 18 408 16 421 4.64e-13 71.2
Msa0661000 AT2G22930.1 23.636 330 224 10 90 409 110 421 8.83e-13 70.1
Msa0661000 AT4G09500.1 23.636 385 215 13 18 371 16 352 2.30e-12 68.9
Msa0661000 AT3G29630.2 31.126 151 97 3 232 381 215 359 3.03e-12 68.6

Find 111 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATTTGTCAACCTTATTT+TGG 0.142647 4_3:-72159404 Msa0661000:CDS
GTTGATTTGTCAAATTAAAA+AGG 0.172101 4_3:+72159963 None:intergenic
TTCTGTGTTATATGTAAGTT+TGG 0.192009 4_3:-72159708 Msa0661000:CDS
ACAGAATTGAAGCATGAAAT+TGG 0.193471 4_3:-72159236 Msa0661000:CDS
TCCTCATGTGATGCACTAAA+TGG 0.206841 4_3:-72159197 Msa0661000:CDS
ACCCTCTGATCTCCAAAATA+AGG 0.251562 4_3:+72159392 None:intergenic
GCTTCAATTCTGTTGCTCTT+TGG 0.255564 4_3:+72159246 None:intergenic
ATGAAGCTGTTGGAGGGTTT+TGG 0.256108 4_3:-72159478 Msa0661000:CDS
TTTGTCCTTCATCGATTCTT+TGG 0.260446 4_3:-72160929 Msa0661000:CDS
GGTTAACTTTGTATAGCTTT+TGG 0.280771 4_3:+72159840 None:intergenic
AACACTTTCAATAACACCTT+TGG 0.290070 4_3:-72159915 Msa0661000:CDS
AAATAAGGTTGACAAATAAT+TGG 0.298423 4_3:+72159407 None:intergenic
ACTAGTATTGTTAGCATCAT+TGG 0.305191 4_3:+72159787 None:intergenic
ACACCTACTTTAACATCTTC+TGG 0.305501 4_3:+72159554 None:intergenic
GCTTGGTAGCTTTAGTTCCT+TGG 0.342541 4_3:+72160906 None:intergenic
CCATGTTTGGAAGGTGGGTT+TGG 0.350717 4_3:-72159351 Msa0661000:CDS
AATCGCAGCAAGTCCAGTTC+TGG 0.355643 4_3:+72159998 None:intergenic
AAGGGACTTGGTGCCAGAAC+TGG 0.363055 4_3:-72160011 Msa0661000:CDS
GGCACCTCAAAGTGAAGTTT+TGG 0.366545 4_3:-72159504 Msa0661000:CDS
AAGGGTGGTTAGAAGACTTA+TGG 0.373991 4_3:-72159294 Msa0661000:CDS
AAGGATCAGGGGAATTGAAA+TGG 0.377470 4_3:+72161153 None:intergenic
ACAGCAGACAAAATTTCCTT+TGG 0.377724 4_3:-72159628 Msa0661000:CDS
CAAGGTTGTTGAGCCATGTT+TGG 0.393614 4_3:-72159364 Msa0661000:CDS
ACACTTTCAATAACACCTTT+GGG 0.400731 4_3:-72159914 Msa0661000:CDS
TTAGGATGATTAGAAGGATC+AGG 0.411557 4_3:+72161140 None:intergenic
CATATTCAATTAACCTTACA+AGG 0.413889 4_3:+72159104 None:intergenic
TTTGGGAAGCATAGCTAGTT+GGG 0.418943 4_3:-72159690 Msa0661000:CDS
TAGAAATTAGGATGATTAGA+AGG 0.426359 4_3:+72161134 None:intergenic
AACTCAAACTAGGCACCGTT+TGG 0.426910 4_3:-72161273 Msa0661000:CDS
AGAGAGGCTGTGTTGTGAAA+TGG 0.428869 4_3:-72159526 Msa0661000:CDS
AAAGTGATAATTGTATATCT+TGG 0.430200 4_3:-72159751 Msa0661000:CDS
CAGCAGACAAAATTTCCTTT+GGG 0.432619 4_3:-72159627 Msa0661000:CDS
ATTAACCTTACAAGGTACTT+AGG 0.432674 4_3:+72159112 None:intergenic
AATCATGTGTAGAGGACCTA+TGG 0.435021 4_3:+72159811 None:intergenic
GTTTGGGAAGCATAGCTAGT+TGG 0.438235 4_3:-72159691 Msa0661000:CDS
ATTGCTTGCATCATCTATGA+TGG 0.440072 4_3:-72160955 Msa0661000:CDS
TTGAGCCATGTTTGGAAGGT+GGG 0.440282 4_3:-72159356 Msa0661000:CDS
GATTTCACAACAAAAGTAAA+GGG 0.443360 4_3:-72159142 Msa0661000:three_prime_UTR
TGTGCCAAAACTTCACTTTG+AGG 0.449664 4_3:+72159500 None:intergenic
TTTGGAAGGTGGGTTTGGAA+TGG 0.450767 4_3:-72159346 Msa0661000:CDS
CAGAATTGAAGCATGAAATT+GGG 0.452258 4_3:-72159235 Msa0661000:CDS
GCCACCATCCTTCATTCAAA+AGG 0.455870 4_3:-72161200 Msa0661000:CDS
AGGATCAGGGGAATTGAAAT+GGG 0.464443 4_3:+72161154 None:intergenic
CTTCATCGATTCTTTGGCCA+AGG 0.471331 4_3:-72160923 Msa0661000:CDS
AATGGTGTAATGTAATAGAA+AGG 0.471709 4_3:-72159328 Msa0661000:CDS
TCTGTGTTATATGTAAGTTT+GGG 0.478228 4_3:-72159707 Msa0661000:CDS
CTAATATCACCACCTTTACA+AGG 0.481870 4_3:-72161248 Msa0661000:CDS
AGATTCAAAGTCAAGGGACT+TGG 0.486018 4_3:-72160023 Msa0661000:CDS
GAGAGGCTGTGTTGTGAAAT+GGG 0.505584 4_3:-72159525 Msa0661000:CDS
GAACACCTAAGTACCTTGTA+AGG 0.513311 4_3:-72159117 Msa0661000:three_prime_UTR
TAGGATGATTAGAAGGATCA+GGG 0.514325 4_3:+72161141 None:intergenic
TGATTTCACAACAAAAGTAA+AGG 0.517067 4_3:-72159143 Msa0661000:three_prime_UTR
AAAGTGCGTATCTTCACTTA+AGG 0.517642 4_3:-72161031 Msa0661000:intron
TAGAAAGGGATGAGATTGAA+AGG 0.527792 4_3:-72159313 Msa0661000:CDS
TTGCCAGAAGATGTTAAAGT+AGG 0.529974 4_3:-72159557 Msa0661000:CDS
AAATTAGCAAATGAAAATCA+TGG 0.533726 4_3:-72160985 Msa0661000:CDS
AAGGGATGAGATTGAAAGGG+TGG 0.538244 4_3:-72159309 Msa0661000:CDS
ATCATGTGTAGAGGACCTAT+GGG 0.538887 4_3:+72159812 None:intergenic
AGACTTATGGTGAATTCAGA+AGG 0.539135 4_3:-72159281 Msa0661000:CDS
CCAAACCCACCTTCCAAACA+TGG 0.541153 4_3:+72159351 None:intergenic
GTTGAGCCATGTTTGGAAGG+TGG 0.541502 4_3:-72159357 Msa0661000:CDS
GGAGTTATGTGGCCTTGTAA+AGG 0.543909 4_3:+72161236 None:intergenic
TGGCACATGAAGCTGTTGGA+GGG 0.545267 4_3:-72159484 Msa0661000:CDS
TGAAACATCGTTGATTGACT+CGG 0.549950 4_3:+72159595 None:intergenic
TGAAATTGGGATAGCTGTGA+AGG 0.553273 4_3:-72159222 Msa0661000:CDS
TTGGCACATGAAGCTGTTGG+AGG 0.555816 4_3:-72159485 Msa0661000:CDS
ATGGGTGTGTGCTATGGTGA+TGG 0.557058 4_3:+72161172 None:intergenic
GTGGTTCGAAAGACTATGCT+TGG 0.557067 4_3:+72160889 None:intergenic
CCTCATGTGATGCACTAAAT+GGG 0.564340 4_3:-72159196 Msa0661000:CDS
AGAAAGGGATGAGATTGAAA+GGG 0.564711 4_3:-72159312 Msa0661000:CDS
GTAGAGGACCTATGGGGAAG+AGG 0.568003 4_3:+72159819 None:intergenic
AAAGGTTACCTTCCATTGCA+AGG 0.569834 4_3:-72160817 Msa0661000:intron
GTTGTTGAGCCATGTTTGGA+AGG 0.575186 4_3:-72159360 Msa0661000:CDS
AGGTATTACCTTGCAATGGA+AGG 0.578217 4_3:+72160809 None:intergenic
ATTGAAATGGGTGTGTGCTA+TGG 0.578704 4_3:+72161166 None:intergenic
TACATTGGAGAGTTTGTGTG+AGG 0.580087 4_3:-72159435 Msa0661000:CDS
AAAGTTAACCTCTTCCCCAT+AGG 0.583136 4_3:-72159827 Msa0661000:CDS
GAAACATCGTTGATTGACTC+GGG 0.585002 4_3:+72159596 None:intergenic
ATGGTGGCTAGTTGAAGCAT+AGG 0.588164 4_3:+72161215 None:intergenic
GACTTATGGTGAATTCAGAA+GGG 0.596627 4_3:-72159280 Msa0661000:CDS
AGTTGATGGAAACTCAAACT+AGG 0.597917 4_3:-72161283 None:intergenic
CTGTGGTTGGAATTCTACAT+TGG 0.598732 4_3:-72159450 Msa0661000:CDS
TATGACAGATTCAAAGTCAA+GGG 0.598856 4_3:-72160029 Msa0661000:intron
GAGCTAACTGAAGTTGCTTG+TGG 0.601046 4_3:-72159659 Msa0661000:CDS
GAGATCAGAGGGTAAATGCA+AGG 0.602462 4_3:-72159382 Msa0661000:CDS
AGTAAGGTATTACCTTGCAA+TGG 0.604211 4_3:+72160805 None:intergenic
ATGGTGTAATGTAATAGAAA+GGG 0.605575 4_3:-72159327 Msa0661000:CDS
GAGTAAATTAGTAGCACTAG+TGG 0.606313 4_3:+72160870 None:intergenic
GTTGAAGCATAGGAGTTATG+TGG 0.608795 4_3:+72161225 None:intergenic
CCCATTTAGTGCATCACATG+AGG 0.610628 4_3:+72159196 None:intergenic
AAAGTAGGTGTAGCTGAGAG+AGG 0.613211 4_3:-72159542 Msa0661000:CDS
GTATGACAGATTCAAAGTCA+AGG 0.617752 4_3:-72160030 Msa0661000:intron
CTTGGCCAAAGAATCGATGA+AGG 0.627855 4_3:+72160924 None:intergenic
TGTCTTCAACTACAAAGCAA+AGG 0.629088 4_3:-72160835 Msa0661000:CDS
AGGATGATTAGAAGGATCAG+GGG 0.634565 4_3:+72161142 None:intergenic
ACATTGGAGAGTTTGTGTGA+GGG 0.636410 4_3:-72159434 Msa0661000:CDS
TTTCACAACAAAAGTAAAGG+GGG 0.637976 4_3:-72159140 Msa0661000:three_prime_UTR
ATTTCACAACAAAAGTAAAG+GGG 0.641128 4_3:-72159141 Msa0661000:three_prime_UTR
GTTATGTGGCCTTGTAAAGG+TGG 0.644335 4_3:+72161239 None:intergenic
TCATTGGCAATCATGTGTAG+AGG 0.648239 4_3:+72159803 None:intergenic
GAAATTGGGATAGCTGTGAA+GGG 0.652289 4_3:-72159221 Msa0661000:CDS
GGGTGTTATATTTAACACTG+TGG 0.654832 4_3:-72159894 Msa0661000:CDS
GTGGTGATATTAGAACCAAA+CGG 0.661629 4_3:+72161258 None:intergenic
CAATCAACGATGTTTCAGCA+TGG 0.663985 4_3:-72159589 Msa0661000:CDS
ACTTATGGTGAATTCAGAAG+GGG 0.666496 4_3:-72159279 Msa0661000:CDS
ATGTGATGCACTAAATGGGT+TGG 0.678223 4_3:-72159192 Msa0661000:CDS
TTCACAACAAAAGTAAAGGG+GGG 0.680289 4_3:-72159139 Msa0661000:three_prime_UTR
TTTGTAGTTGAAGACACACA+TGG 0.682898 4_3:+72160842 None:intergenic
GTGTTAAATATAACACCCAA+AGG 0.691470 4_3:+72159899 None:intergenic
ACTCGGGTCGAATAACCCAA+AGG 0.704731 4_3:+72159612 None:intergenic
TCATGTGTAGAGGACCTATG+GGG 0.741563 4_3:+72159813 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTAAATAAATTAGTTTTAT+TGG - chr4_3:72159891-72159910 Msa0661000:CDS 10.0%
!!! GTTAAATAAATTAGTTTTAT+TGG - chr4_3:72159891-72159910 Msa0661000:CDS 10.0%
!! GAAAGTAAAAAATAGAAATT+AGG + chr4_3:72159204-72159223 None:intergenic 15.0%
!!! TTATATTTTCAATTCATTCA+TGG - chr4_3:72159622-72159641 Msa0661000:CDS 15.0%
!!! TATATTTTCAATTCATTCAT+GGG - chr4_3:72159623-72159642 Msa0661000:CDS 15.0%
!! AAAAATGAGAATATTTCTTA+TGG - chr4_3:72159722-72159741 Msa0661000:CDS 15.0%
!! TCTATCTATCTATATATTAT+TGG + chr4_3:72159982-72160001 None:intergenic 15.0%
!! ATGTAAATATAAATATGTTG+AGG - chr4_3:72160132-72160151 Msa0661000:intron 15.0%
!!! TTGATTTGTCAAATTAAAAA+GGG + chr4_3:72160362-72160381 None:intergenic 15.0%
!!! CTTTAATTAGTTTGTTTTTT+TGG - chr4_3:72161247-72161266 Msa0661000:CDS 15.0%
!! GAAAGTAAAAAATAGAAATT+AGG + chr4_3:72159204-72159223 None:intergenic 15.0%
!!! TTATATTTTCAATTCATTCA+TGG - chr4_3:72159622-72159641 Msa0661000:CDS 15.0%
!!! TATATTTTCAATTCATTCAT+GGG - chr4_3:72159623-72159642 Msa0661000:CDS 15.0%
!! AAAAATGAGAATATTTCTTA+TGG - chr4_3:72159722-72159741 Msa0661000:CDS 15.0%
!! TCTATCTATCTATATATTAT+TGG + chr4_3:72159982-72160001 None:intergenic 15.0%
!! ATGTAAATATAAATATGTTG+AGG - chr4_3:72160132-72160151 Msa0661000:intron 15.0%
!!! TTGATTTGTCAAATTAAAAA+GGG + chr4_3:72160362-72160381 None:intergenic 15.0%
!!! CTTTAATTAGTTTGTTTTTT+TGG - chr4_3:72161247-72161266 Msa0661000:CDS 15.0%
!! AAATTAGCAAATGAAAATCA+TGG - chr4_3:72159338-72159357 Msa0661000:CDS 20.0%
!! ATCTATCTATATATTATTGG+AGG + chr4_3:72159979-72159998 None:intergenic 20.0%
!! AGCTAAAAAAATTATGGTTA+TGG + chr4_3:72160097-72160116 None:intergenic 20.0%
!! CATACAAGCTAAAAAAATTA+TGG + chr4_3:72160103-72160122 None:intergenic 20.0%
!!! TGATTTGTCAAATTAAAAAG+GGG + chr4_3:72160361-72160380 None:intergenic 20.0%
!!! GTTGATTTGTCAAATTAAAA+AGG + chr4_3:72160363-72160382 None:intergenic 20.0%
!! AAAGTGATAATTGTATATCT+TGG - chr4_3:72160572-72160591 Msa0661000:intron 20.0%
!! AAATAAGGTTGACAAATAAT+TGG + chr4_3:72160919-72160938 None:intergenic 20.0%
!!! ATTATTTGTCAACCTTATTT+TGG - chr4_3:72160919-72160938 Msa0661000:CDS 20.0%
!! AAATTAGCAAATGAAAATCA+TGG - chr4_3:72159338-72159357 Msa0661000:CDS 20.0%
!! ATCTATCTATATATTATTGG+AGG + chr4_3:72159979-72159998 None:intergenic 20.0%
!! AGCTAAAAAAATTATGGTTA+TGG + chr4_3:72160097-72160116 None:intergenic 20.0%
!! CATACAAGCTAAAAAAATTA+TGG + chr4_3:72160103-72160122 None:intergenic 20.0%
!!! TGATTTGTCAAATTAAAAAG+GGG + chr4_3:72160361-72160380 None:intergenic 20.0%
!!! GTTGATTTGTCAAATTAAAA+AGG + chr4_3:72160363-72160382 None:intergenic 20.0%
!! AAAGTGATAATTGTATATCT+TGG - chr4_3:72160572-72160591 Msa0661000:intron 20.0%
!! AAATAAGGTTGACAAATAAT+TGG + chr4_3:72160919-72160938 None:intergenic 20.0%
!!! ATTATTTGTCAACCTTATTT+TGG - chr4_3:72160919-72160938 Msa0661000:CDS 20.0%
! TAGAAATTAGGATGATTAGA+AGG + chr4_3:72159192-72159211 None:intergenic 25.0%
! AAAATTCTTGGAAGTGATTT+GGG + chr4_3:72159246-72159265 None:intergenic 25.0%
! AGCAATATCTACAAAATTCT+TGG + chr4_3:72159258-72159277 None:intergenic 25.0%
! AAAGTCATAAAGTCATAGTA+AGG + chr4_3:72159537-72159556 None:intergenic 25.0%
!!! TTTTCACCAGTTACTTTTTT+TGG - chr4_3:72159561-72159580 Msa0661000:CDS 25.0%
! ATTGATCCAAAAAAAGTAAC+TGG + chr4_3:72159570-72159589 None:intergenic 25.0%
! CTTGTTGAAATCAATATGTA+GGG + chr4_3:72159800-72159819 None:intergenic 25.0%
! TCTTGTTGAAATCAATATGT+AGG + chr4_3:72159801-72159820 None:intergenic 25.0%
!!! TTTTATTGGTTATTCTTTGC+TGG - chr4_3:72159905-72159924 Msa0661000:CDS 25.0%
! TATCTATATATTATTGGAGG+TGG + chr4_3:72159976-72159995 None:intergenic 25.0%
! ATTAAACATGAGGAATCTTT+CGG + chr4_3:72160024-72160043 None:intergenic 25.0%
! CATTTCTTAACATGAATAAG+TGG + chr4_3:72160179-72160198 None:intergenic 25.0%
! TTCTGTGTTATATGTAAGTT+TGG - chr4_3:72160615-72160634 Msa0661000:intron 25.0%
! TCTGTGTTATATGTAAGTTT+GGG - chr4_3:72160616-72160635 Msa0661000:intron 25.0%
! AATGGTGTAATGTAATAGAA+AGG - chr4_3:72160995-72161014 Msa0661000:CDS 25.0%
! ATGGTGTAATGTAATAGAAA+GGG - chr4_3:72160996-72161015 Msa0661000:CDS 25.0%
! TGATTTCACAACAAAAGTAA+AGG - chr4_3:72161180-72161199 Msa0661000:CDS 25.0%
! GATTTCACAACAAAAGTAAA+GGG - chr4_3:72161181-72161200 Msa0661000:CDS 25.0%
! ATTTCACAACAAAAGTAAAG+GGG - chr4_3:72161182-72161201 Msa0661000:CDS 25.0%
! CATATTCAATTAACCTTACA+AGG + chr4_3:72161222-72161241 None:intergenic 25.0%
! TAGAAATTAGGATGATTAGA+AGG + chr4_3:72159192-72159211 None:intergenic 25.0%
! AAAATTCTTGGAAGTGATTT+GGG + chr4_3:72159246-72159265 None:intergenic 25.0%
! AGCAATATCTACAAAATTCT+TGG + chr4_3:72159258-72159277 None:intergenic 25.0%
! AAAGTCATAAAGTCATAGTA+AGG + chr4_3:72159537-72159556 None:intergenic 25.0%
!!! TTTTCACCAGTTACTTTTTT+TGG - chr4_3:72159561-72159580 Msa0661000:CDS 25.0%
! ATTGATCCAAAAAAAGTAAC+TGG + chr4_3:72159570-72159589 None:intergenic 25.0%
! CTTGTTGAAATCAATATGTA+GGG + chr4_3:72159800-72159819 None:intergenic 25.0%
! TCTTGTTGAAATCAATATGT+AGG + chr4_3:72159801-72159820 None:intergenic 25.0%
!!! TTTTATTGGTTATTCTTTGC+TGG - chr4_3:72159905-72159924 Msa0661000:CDS 25.0%
! TATCTATATATTATTGGAGG+TGG + chr4_3:72159976-72159995 None:intergenic 25.0%
! ATTAAACATGAGGAATCTTT+CGG + chr4_3:72160024-72160043 None:intergenic 25.0%
! CATTTCTTAACATGAATAAG+TGG + chr4_3:72160179-72160198 None:intergenic 25.0%
! TTCTGTGTTATATGTAAGTT+TGG - chr4_3:72160615-72160634 Msa0661000:intron 25.0%
! TCTGTGTTATATGTAAGTTT+GGG - chr4_3:72160616-72160635 Msa0661000:intron 25.0%
! AATGGTGTAATGTAATAGAA+AGG - chr4_3:72160995-72161014 Msa0661000:CDS 25.0%
! ATGGTGTAATGTAATAGAAA+GGG - chr4_3:72160996-72161015 Msa0661000:CDS 25.0%
! TGATTTCACAACAAAAGTAA+AGG - chr4_3:72161180-72161199 Msa0661000:CDS 25.0%
! GATTTCACAACAAAAGTAAA+GGG - chr4_3:72161181-72161200 Msa0661000:CDS 25.0%
! ATTTCACAACAAAAGTAAAG+GGG - chr4_3:72161182-72161201 Msa0661000:CDS 25.0%
! CATATTCAATTAACCTTACA+AGG + chr4_3:72161222-72161241 None:intergenic 25.0%
!!! CTATTTTTTACTTTCTCCGA+TGG - chr4_3:72159209-72159228 Msa0661000:CDS 30.0%
TTGGGTATTAGATAAACCAT+CGG + chr4_3:72159228-72159247 None:intergenic 30.0%
CAAAATTCTTGGAAGTGATT+TGG + chr4_3:72159247-72159266 None:intergenic 30.0%
! ACTCTATCATTTTCCTTAAG+AGG - chr4_3:72159844-72159863 Msa0661000:CDS 30.0%
! CTCTATCATTTTCCTTAAGA+GGG - chr4_3:72159845-72159864 Msa0661000:CDS 30.0%
TATATTATTGGAGGTGGAAT+TGG + chr4_3:72159970-72159989 None:intergenic 30.0%
TTAAACATGAGGAATCTTTC+GGG + chr4_3:72160023-72160042 None:intergenic 30.0%
TATGACAGATTCAAAGTCAA+GGG - chr4_3:72160294-72160313 Msa0661000:intron 30.0%
AACACTTTCAATAACACCTT+TGG - chr4_3:72160408-72160427 Msa0661000:intron 30.0%
ACACTTTCAATAACACCTTT+GGG - chr4_3:72160409-72160428 Msa0661000:intron 30.0%
GTGTTAAATATAACACCCAA+AGG + chr4_3:72160427-72160446 None:intergenic 30.0%
! GGTTAACTTTGTATAGCTTT+TGG + chr4_3:72160486-72160505 None:intergenic 30.0%
ACTAGTATTGTTAGCATCAT+TGG + chr4_3:72160539-72160558 None:intergenic 30.0%
ACAGAATTGAAGCATGAAAT+TGG - chr4_3:72161087-72161106 Msa0661000:intron 30.0%
CAGAATTGAAGCATGAAATT+GGG - chr4_3:72161088-72161107 Msa0661000:intron 30.0%
TTTCACAACAAAAGTAAAGG+GGG - chr4_3:72161183-72161202 Msa0661000:CDS 30.0%
! ATTAACCTTACAAGGTACTT+AGG + chr4_3:72161214-72161233 None:intergenic 30.0%
!!! CTATTTTTTACTTTCTCCGA+TGG - chr4_3:72159209-72159228 Msa0661000:CDS 30.0%
TTGGGTATTAGATAAACCAT+CGG + chr4_3:72159228-72159247 None:intergenic 30.0%
CAAAATTCTTGGAAGTGATT+TGG + chr4_3:72159247-72159266 None:intergenic 30.0%
! ACTCTATCATTTTCCTTAAG+AGG - chr4_3:72159844-72159863 Msa0661000:CDS 30.0%
! CTCTATCATTTTCCTTAAGA+GGG - chr4_3:72159845-72159864 Msa0661000:CDS 30.0%
TATATTATTGGAGGTGGAAT+TGG + chr4_3:72159970-72159989 None:intergenic 30.0%
TTAAACATGAGGAATCTTTC+GGG + chr4_3:72160023-72160042 None:intergenic 30.0%
TATGACAGATTCAAAGTCAA+GGG - chr4_3:72160294-72160313 Msa0661000:intron 30.0%
AACACTTTCAATAACACCTT+TGG - chr4_3:72160408-72160427 Msa0661000:intron 30.0%
ACACTTTCAATAACACCTTT+GGG - chr4_3:72160409-72160428 Msa0661000:intron 30.0%
GTGTTAAATATAACACCCAA+AGG + chr4_3:72160427-72160446 None:intergenic 30.0%
! GGTTAACTTTGTATAGCTTT+TGG + chr4_3:72160486-72160505 None:intergenic 30.0%
ACTAGTATTGTTAGCATCAT+TGG + chr4_3:72160539-72160558 None:intergenic 30.0%
ACAGAATTGAAGCATGAAAT+TGG - chr4_3:72161087-72161106 Msa0661000:intron 30.0%
CAGAATTGAAGCATGAAATT+GGG - chr4_3:72161088-72161107 Msa0661000:intron 30.0%
TTTCACAACAAAAGTAAAGG+GGG - chr4_3:72161183-72161202 Msa0661000:CDS 30.0%
! ATTAACCTTACAAGGTACTT+AGG + chr4_3:72161214-72161233 None:intergenic 30.0%
GTGGTGATATTAGAACCAAA+CGG + chr4_3:72159068-72159087 None:intergenic 35.0%
CTAATATCACCACCTTTACA+AGG - chr4_3:72159075-72159094 Msa0661000:three_prime_UTR 35.0%
! GAAACCTTTTGAATGAAGGA+TGG + chr4_3:72159130-72159149 None:intergenic 35.0%
! TGGAGAAACCTTTTGAATGA+AGG + chr4_3:72159134-72159153 None:intergenic 35.0%
TAGGATGATTAGAAGGATCA+GGG + chr4_3:72159185-72159204 None:intergenic 35.0%
TTAGGATGATTAGAAGGATC+AGG + chr4_3:72159186-72159205 None:intergenic 35.0%
AAAGTGCGTATCTTCACTTA+AGG - chr4_3:72159292-72159311 Msa0661000:CDS 35.0%
ATTGCTTGCATCATCTATGA+TGG - chr4_3:72159368-72159387 Msa0661000:CDS 35.0%
!! TTTGTCCTTCATCGATTCTT+TGG - chr4_3:72159394-72159413 Msa0661000:CDS 35.0%
GAGTAAATTAGTAGCACTAG+TGG + chr4_3:72159456-72159475 None:intergenic 35.0%
TTTGTAGTTGAAGACACACA+TGG + chr4_3:72159484-72159503 None:intergenic 35.0%
TGTCTTCAACTACAAAGCAA+AGG - chr4_3:72159488-72159507 Msa0661000:CDS 35.0%
! AGTAAGGTATTACCTTGCAA+TGG + chr4_3:72159521-72159540 None:intergenic 35.0%
ATTTGTACACACCCATACAT+GGG - chr4_3:72159681-72159700 Msa0661000:CDS 35.0%
AGCAGAAAATTCCCATGTAT+GGG + chr4_3:72159695-72159714 None:intergenic 35.0%
GATAGAGTCGTGTAAACATA+TGG + chr4_3:72159832-72159851 None:intergenic 35.0%
GAATCTCTCTCAATCACTAT+TGG - chr4_3:72159939-72159958 Msa0661000:CDS 35.0%
CTTCAAGCTCATTAAACATG+AGG + chr4_3:72160034-72160053 None:intergenic 35.0%
TTGAGGTTAGAATTCGAACT+CGG - chr4_3:72160149-72160168 Msa0661000:intron 35.0%
GTATGACAGATTCAAAGTCA+AGG - chr4_3:72160293-72160312 Msa0661000:intron 35.0%
! GGGTGTTATATTTAACACTG+TGG - chr4_3:72160429-72160448 Msa0661000:intron 35.0%
!!! CTTTGTATAGCTTTTGGAGT+TGG + chr4_3:72160480-72160499 None:intergenic 35.0%
ACAGCAGACAAAATTTCCTT+TGG - chr4_3:72160695-72160714 Msa0661000:intron 35.0%
CAGCAGACAAAATTTCCTTT+GGG - chr4_3:72160696-72160715 Msa0661000:intron 35.0%
! TGAAACATCGTTGATTGACT+CGG + chr4_3:72160731-72160750 None:intergenic 35.0%
TTGCCAGAAGATGTTAAAGT+AGG - chr4_3:72160766-72160785 Msa0661000:intron 35.0%
ACACCTACTTTAACATCTTC+TGG + chr4_3:72160772-72160791 None:intergenic 35.0%
!!! AACCTTATTTTGGAGATCAG+AGG - chr4_3:72160929-72160948 Msa0661000:CDS 35.0%
!!! ACCTTATTTTGGAGATCAGA+GGG - chr4_3:72160930-72160949 Msa0661000:CDS 35.0%
TAGAAAGGGATGAGATTGAA+AGG - chr4_3:72161010-72161029 Msa0661000:CDS 35.0%
AGAAAGGGATGAGATTGAAA+GGG - chr4_3:72161011-72161030 Msa0661000:CDS 35.0%
AGACTTATGGTGAATTCAGA+AGG - chr4_3:72161042-72161061 Msa0661000:intron 35.0%
GACTTATGGTGAATTCAGAA+GGG - chr4_3:72161043-72161062 Msa0661000:intron 35.0%
ACTTATGGTGAATTCAGAAG+GGG - chr4_3:72161044-72161063 Msa0661000:intron 35.0%
TTCACAACAAAAGTAAAGGG+GGG - chr4_3:72161184-72161203 Msa0661000:CDS 35.0%
GTGGTGATATTAGAACCAAA+CGG + chr4_3:72159068-72159087 None:intergenic 35.0%
CTAATATCACCACCTTTACA+AGG - chr4_3:72159075-72159094 Msa0661000:three_prime_UTR 35.0%
! GAAACCTTTTGAATGAAGGA+TGG + chr4_3:72159130-72159149 None:intergenic 35.0%
! TGGAGAAACCTTTTGAATGA+AGG + chr4_3:72159134-72159153 None:intergenic 35.0%
TAGGATGATTAGAAGGATCA+GGG + chr4_3:72159185-72159204 None:intergenic 35.0%
TTAGGATGATTAGAAGGATC+AGG + chr4_3:72159186-72159205 None:intergenic 35.0%
AAAGTGCGTATCTTCACTTA+AGG - chr4_3:72159292-72159311 Msa0661000:CDS 35.0%
ATTGCTTGCATCATCTATGA+TGG - chr4_3:72159368-72159387 Msa0661000:CDS 35.0%
!! TTTGTCCTTCATCGATTCTT+TGG - chr4_3:72159394-72159413 Msa0661000:CDS 35.0%
GAGTAAATTAGTAGCACTAG+TGG + chr4_3:72159456-72159475 None:intergenic 35.0%
TTTGTAGTTGAAGACACACA+TGG + chr4_3:72159484-72159503 None:intergenic 35.0%
TGTCTTCAACTACAAAGCAA+AGG - chr4_3:72159488-72159507 Msa0661000:CDS 35.0%
! AGTAAGGTATTACCTTGCAA+TGG + chr4_3:72159521-72159540 None:intergenic 35.0%
ATTTGTACACACCCATACAT+GGG - chr4_3:72159681-72159700 Msa0661000:CDS 35.0%
AGCAGAAAATTCCCATGTAT+GGG + chr4_3:72159695-72159714 None:intergenic 35.0%
GATAGAGTCGTGTAAACATA+TGG + chr4_3:72159832-72159851 None:intergenic 35.0%
GAATCTCTCTCAATCACTAT+TGG - chr4_3:72159939-72159958 Msa0661000:CDS 35.0%
CTTCAAGCTCATTAAACATG+AGG + chr4_3:72160034-72160053 None:intergenic 35.0%
TTGAGGTTAGAATTCGAACT+CGG - chr4_3:72160149-72160168 Msa0661000:intron 35.0%
GTATGACAGATTCAAAGTCA+AGG - chr4_3:72160293-72160312 Msa0661000:intron 35.0%
! GGGTGTTATATTTAACACTG+TGG - chr4_3:72160429-72160448 Msa0661000:intron 35.0%
!!! CTTTGTATAGCTTTTGGAGT+TGG + chr4_3:72160480-72160499 None:intergenic 35.0%
ACAGCAGACAAAATTTCCTT+TGG - chr4_3:72160695-72160714 Msa0661000:intron 35.0%
CAGCAGACAAAATTTCCTTT+GGG - chr4_3:72160696-72160715 Msa0661000:intron 35.0%
! TGAAACATCGTTGATTGACT+CGG + chr4_3:72160731-72160750 None:intergenic 35.0%
TTGCCAGAAGATGTTAAAGT+AGG - chr4_3:72160766-72160785 Msa0661000:intron 35.0%
ACACCTACTTTAACATCTTC+TGG + chr4_3:72160772-72160791 None:intergenic 35.0%
!!! AACCTTATTTTGGAGATCAG+AGG - chr4_3:72160929-72160948 Msa0661000:CDS 35.0%
!!! ACCTTATTTTGGAGATCAGA+GGG - chr4_3:72160930-72160949 Msa0661000:CDS 35.0%
TAGAAAGGGATGAGATTGAA+AGG - chr4_3:72161010-72161029 Msa0661000:CDS 35.0%
AGAAAGGGATGAGATTGAAA+GGG - chr4_3:72161011-72161030 Msa0661000:CDS 35.0%
AGACTTATGGTGAATTCAGA+AGG - chr4_3:72161042-72161061 Msa0661000:intron 35.0%
GACTTATGGTGAATTCAGAA+GGG - chr4_3:72161043-72161062 Msa0661000:intron 35.0%
ACTTATGGTGAATTCAGAAG+GGG - chr4_3:72161044-72161063 Msa0661000:intron 35.0%
TTCACAACAAAAGTAAAGGG+GGG - chr4_3:72161184-72161203 Msa0661000:CDS 35.0%
GTTGAAGCATAGGAGTTATG+TGG + chr4_3:72159101-72159120 None:intergenic 40.0%
! ACCTTTTGAATGAAGGATGG+TGG + chr4_3:72159127-72159146 None:intergenic 40.0%
ATTGAAATGGGTGTGTGCTA+TGG + chr4_3:72159160-72159179 None:intergenic 40.0%
AGGATCAGGGGAATTGAAAT+GGG + chr4_3:72159172-72159191 None:intergenic 40.0%
AAGGATCAGGGGAATTGAAA+TGG + chr4_3:72159173-72159192 None:intergenic 40.0%
AGGATGATTAGAAGGATCAG+GGG + chr4_3:72159184-72159203 None:intergenic 40.0%
AAAGGTTACCTTCCATTGCA+AGG - chr4_3:72159506-72159525 Msa0661000:CDS 40.0%
AGGTATTACCTTGCAATGGA+AGG + chr4_3:72159517-72159536 None:intergenic 40.0%
CATTTGTACACACCCATACA+TGG - chr4_3:72159680-72159699 Msa0661000:CDS 40.0%
CAGCAGAAAATTCCCATGTA+TGG + chr4_3:72159696-72159715 None:intergenic 40.0%
! GTTTTGTGAAGACCCTCTTA+AGG + chr4_3:72159860-72159879 None:intergenic 40.0%
AGATTCAAAGTCAAGGGACT+TGG - chr4_3:72160300-72160319 Msa0661000:intron 40.0%
AAAGTTAACCTCTTCCCCAT+AGG - chr4_3:72160496-72160515 Msa0661000:intron 40.0%
ATCATGTGTAGAGGACCTAT+GGG + chr4_3:72160514-72160533 None:intergenic 40.0%
AATCATGTGTAGAGGACCTA+TGG + chr4_3:72160515-72160534 None:intergenic 40.0%
TCATTGGCAATCATGTGTAG+AGG + chr4_3:72160523-72160542 None:intergenic 40.0%
! TTTGGGAAGCATAGCTAGTT+GGG - chr4_3:72160633-72160652 Msa0661000:intron 40.0%
! GAAACATCGTTGATTGACTC+GGG + chr4_3:72160730-72160749 None:intergenic 40.0%
CAATCAACGATGTTTCAGCA+TGG - chr4_3:72160734-72160753 Msa0661000:intron 40.0%
TGTGCCAAAACTTCACTTTG+AGG + chr4_3:72160826-72160845 None:intergenic 40.0%
CTGTGGTTGGAATTCTACAT+TGG - chr4_3:72160873-72160892 Msa0661000:CDS 40.0%
TACATTGGAGAGTTTGTGTG+AGG - chr4_3:72160888-72160907 Msa0661000:CDS 40.0%
ACATTGGAGAGTTTGTGTGA+GGG - chr4_3:72160889-72160908 Msa0661000:CDS 40.0%
ACCCTCTGATCTCCAAAATA+AGG + chr4_3:72160934-72160953 None:intergenic 40.0%
AAGGGTGGTTAGAAGACTTA+TGG - chr4_3:72161029-72161048 Msa0661000:CDS 40.0%
GCTTCAATTCTGTTGCTCTT+TGG + chr4_3:72161080-72161099 None:intergenic 40.0%
TGAAATTGGGATAGCTGTGA+AGG - chr4_3:72161101-72161120 Msa0661000:intron 40.0%
GAAATTGGGATAGCTGTGAA+GGG - chr4_3:72161102-72161121 Msa0661000:intron 40.0%
TCCTCATGTGATGCACTAAA+TGG - chr4_3:72161126-72161145 Msa0661000:CDS 40.0%
CCTCATGTGATGCACTAAAT+GGG - chr4_3:72161127-72161146 Msa0661000:CDS 40.0%
ATGTGATGCACTAAATGGGT+TGG - chr4_3:72161131-72161150 Msa0661000:CDS 40.0%
GAACACCTAAGTACCTTGTA+AGG - chr4_3:72161206-72161225 Msa0661000:CDS 40.0%
GTTGAAGCATAGGAGTTATG+TGG + chr4_3:72159101-72159120 None:intergenic 40.0%
! ACCTTTTGAATGAAGGATGG+TGG + chr4_3:72159127-72159146 None:intergenic 40.0%
ATTGAAATGGGTGTGTGCTA+TGG + chr4_3:72159160-72159179 None:intergenic 40.0%
AGGATCAGGGGAATTGAAAT+GGG + chr4_3:72159172-72159191 None:intergenic 40.0%
AAGGATCAGGGGAATTGAAA+TGG + chr4_3:72159173-72159192 None:intergenic 40.0%
AGGATGATTAGAAGGATCAG+GGG + chr4_3:72159184-72159203 None:intergenic 40.0%
AAAGGTTACCTTCCATTGCA+AGG - chr4_3:72159506-72159525 Msa0661000:CDS 40.0%
AGGTATTACCTTGCAATGGA+AGG + chr4_3:72159517-72159536 None:intergenic 40.0%
CATTTGTACACACCCATACA+TGG - chr4_3:72159680-72159699 Msa0661000:CDS 40.0%
CAGCAGAAAATTCCCATGTA+TGG + chr4_3:72159696-72159715 None:intergenic 40.0%
! GTTTTGTGAAGACCCTCTTA+AGG + chr4_3:72159860-72159879 None:intergenic 40.0%
AGATTCAAAGTCAAGGGACT+TGG - chr4_3:72160300-72160319 Msa0661000:intron 40.0%
AAAGTTAACCTCTTCCCCAT+AGG - chr4_3:72160496-72160515 Msa0661000:intron 40.0%
ATCATGTGTAGAGGACCTAT+GGG + chr4_3:72160514-72160533 None:intergenic 40.0%
AATCATGTGTAGAGGACCTA+TGG + chr4_3:72160515-72160534 None:intergenic 40.0%
TCATTGGCAATCATGTGTAG+AGG + chr4_3:72160523-72160542 None:intergenic 40.0%
! TTTGGGAAGCATAGCTAGTT+GGG - chr4_3:72160633-72160652 Msa0661000:intron 40.0%
! GAAACATCGTTGATTGACTC+GGG + chr4_3:72160730-72160749 None:intergenic 40.0%
CAATCAACGATGTTTCAGCA+TGG - chr4_3:72160734-72160753 Msa0661000:intron 40.0%
TGTGCCAAAACTTCACTTTG+AGG + chr4_3:72160826-72160845 None:intergenic 40.0%
CTGTGGTTGGAATTCTACAT+TGG - chr4_3:72160873-72160892 Msa0661000:CDS 40.0%
TACATTGGAGAGTTTGTGTG+AGG - chr4_3:72160888-72160907 Msa0661000:CDS 40.0%
ACATTGGAGAGTTTGTGTGA+GGG - chr4_3:72160889-72160908 Msa0661000:CDS 40.0%
ACCCTCTGATCTCCAAAATA+AGG + chr4_3:72160934-72160953 None:intergenic 40.0%
AAGGGTGGTTAGAAGACTTA+TGG - chr4_3:72161029-72161048 Msa0661000:CDS 40.0%
GCTTCAATTCTGTTGCTCTT+TGG + chr4_3:72161080-72161099 None:intergenic 40.0%
TGAAATTGGGATAGCTGTGA+AGG - chr4_3:72161101-72161120 Msa0661000:intron 40.0%
GAAATTGGGATAGCTGTGAA+GGG - chr4_3:72161102-72161121 Msa0661000:intron 40.0%
TCCTCATGTGATGCACTAAA+TGG - chr4_3:72161126-72161145 Msa0661000:CDS 40.0%
CCTCATGTGATGCACTAAAT+GGG - chr4_3:72161127-72161146 Msa0661000:CDS 40.0%
ATGTGATGCACTAAATGGGT+TGG - chr4_3:72161131-72161150 Msa0661000:CDS 40.0%
GAACACCTAAGTACCTTGTA+AGG - chr4_3:72161206-72161225 Msa0661000:CDS 40.0%
! AACTCAAACTAGGCACCGTT+TGG - chr4_3:72159050-72159069 Msa0661000:three_prime_UTR 45.0%
!! GTTATGTGGCCTTGTAAAGG+TGG + chr4_3:72159087-72159106 None:intergenic 45.0%
!! GGAGTTATGTGGCCTTGTAA+AGG + chr4_3:72159090-72159109 None:intergenic 45.0%
! ATGGTGGCTAGTTGAAGCAT+AGG + chr4_3:72159111-72159130 None:intergenic 45.0%
GCCACCATCCTTCATTCAAA+AGG - chr4_3:72159123-72159142 Msa0661000:three_prime_UTR 45.0%
CTTGGCCAAAGAATCGATGA+AGG + chr4_3:72159402-72159421 None:intergenic 45.0%
!! CTTCATCGATTCTTTGGCCA+AGG - chr4_3:72159400-72159419 Msa0661000:CDS 45.0%
!! GCTTGGTAGCTTTAGTTCCT+TGG + chr4_3:72159420-72159439 None:intergenic 45.0%
GTGGTTCGAAAGACTATGCT+TGG + chr4_3:72159437-72159456 None:intergenic 45.0%
AACATGAGGAATCTTTCGGG+AGG + chr4_3:72160020-72160039 None:intergenic 45.0%
TCATGTGTAGAGGACCTATG+GGG + chr4_3:72160513-72160532 None:intergenic 45.0%
! GTTTGGGAAGCATAGCTAGT+TGG - chr4_3:72160632-72160651 Msa0661000:intron 45.0%
GAGCTAACTGAAGTTGCTTG+TGG - chr4_3:72160664-72160683 Msa0661000:intron 45.0%
AAAGTAGGTGTAGCTGAGAG+AGG - chr4_3:72160781-72160800 Msa0661000:intron 45.0%
AGAGAGGCTGTGTTGTGAAA+TGG - chr4_3:72160797-72160816 Msa0661000:intron 45.0%
GAGAGGCTGTGTTGTGAAAT+GGG - chr4_3:72160798-72160817 Msa0661000:intron 45.0%
! GGCACCTCAAAGTGAAGTTT+TGG - chr4_3:72160819-72160838 Msa0661000:CDS 45.0%
!! GTTTTGGCACATGAAGCTGT+TGG - chr4_3:72160835-72160854 Msa0661000:CDS 45.0%
! ATGAAGCTGTTGGAGGGTTT+TGG - chr4_3:72160845-72160864 Msa0661000:CDS 45.0%
GAGATCAGAGGGTAAATGCA+AGG - chr4_3:72160941-72160960 Msa0661000:CDS 45.0%
CAAGGTTGTTGAGCCATGTT+TGG - chr4_3:72160959-72160978 Msa0661000:CDS 45.0%
GTTGTTGAGCCATGTTTGGA+AGG - chr4_3:72160963-72160982 Msa0661000:CDS 45.0%
TTGAGCCATGTTTGGAAGGT+GGG - chr4_3:72160967-72160986 Msa0661000:CDS 45.0%
! TTTGGAAGGTGGGTTTGGAA+TGG - chr4_3:72160977-72160996 Msa0661000:CDS 45.0%
AAGGGATGAGATTGAAAGGG+TGG - chr4_3:72161014-72161033 Msa0661000:CDS 45.0%
CCCATTTAGTGCATCACATG+AGG + chr4_3:72161130-72161149 None:intergenic 45.0%
! AACTCAAACTAGGCACCGTT+TGG - chr4_3:72159050-72159069 Msa0661000:three_prime_UTR 45.0%
!! GTTATGTGGCCTTGTAAAGG+TGG + chr4_3:72159087-72159106 None:intergenic 45.0%
!! GGAGTTATGTGGCCTTGTAA+AGG + chr4_3:72159090-72159109 None:intergenic 45.0%
! ATGGTGGCTAGTTGAAGCAT+AGG + chr4_3:72159111-72159130 None:intergenic 45.0%
GCCACCATCCTTCATTCAAA+AGG - chr4_3:72159123-72159142 Msa0661000:three_prime_UTR 45.0%
CTTGGCCAAAGAATCGATGA+AGG + chr4_3:72159402-72159421 None:intergenic 45.0%
!! CTTCATCGATTCTTTGGCCA+AGG - chr4_3:72159400-72159419 Msa0661000:CDS 45.0%
!! GCTTGGTAGCTTTAGTTCCT+TGG + chr4_3:72159420-72159439 None:intergenic 45.0%
GTGGTTCGAAAGACTATGCT+TGG + chr4_3:72159437-72159456 None:intergenic 45.0%
AACATGAGGAATCTTTCGGG+AGG + chr4_3:72160020-72160039 None:intergenic 45.0%
TCATGTGTAGAGGACCTATG+GGG + chr4_3:72160513-72160532 None:intergenic 45.0%
! GTTTGGGAAGCATAGCTAGT+TGG - chr4_3:72160632-72160651 Msa0661000:intron 45.0%
GAGCTAACTGAAGTTGCTTG+TGG - chr4_3:72160664-72160683 Msa0661000:intron 45.0%
AAAGTAGGTGTAGCTGAGAG+AGG - chr4_3:72160781-72160800 Msa0661000:intron 45.0%
AGAGAGGCTGTGTTGTGAAA+TGG - chr4_3:72160797-72160816 Msa0661000:intron 45.0%
GAGAGGCTGTGTTGTGAAAT+GGG - chr4_3:72160798-72160817 Msa0661000:intron 45.0%
! GGCACCTCAAAGTGAAGTTT+TGG - chr4_3:72160819-72160838 Msa0661000:CDS 45.0%
!! GTTTTGGCACATGAAGCTGT+TGG - chr4_3:72160835-72160854 Msa0661000:CDS 45.0%
! ATGAAGCTGTTGGAGGGTTT+TGG - chr4_3:72160845-72160864 Msa0661000:CDS 45.0%
GAGATCAGAGGGTAAATGCA+AGG - chr4_3:72160941-72160960 Msa0661000:CDS 45.0%
CAAGGTTGTTGAGCCATGTT+TGG - chr4_3:72160959-72160978 Msa0661000:CDS 45.0%
GTTGTTGAGCCATGTTTGGA+AGG - chr4_3:72160963-72160982 Msa0661000:CDS 45.0%
TTGAGCCATGTTTGGAAGGT+GGG - chr4_3:72160967-72160986 Msa0661000:CDS 45.0%
! TTTGGAAGGTGGGTTTGGAA+TGG - chr4_3:72160977-72160996 Msa0661000:CDS 45.0%
AAGGGATGAGATTGAAAGGG+TGG - chr4_3:72161014-72161033 Msa0661000:CDS 45.0%
CCCATTTAGTGCATCACATG+AGG + chr4_3:72161130-72161149 None:intergenic 45.0%
ATGGGTGTGTGCTATGGTGA+TGG + chr4_3:72159154-72159173 None:intergenic 50.0%
AATCGCAGCAAGTCCAGTTC+TGG + chr4_3:72160328-72160347 None:intergenic 50.0%
ACTCGGGTCGAATAACCCAA+AGG + chr4_3:72160714-72160733 None:intergenic 50.0%
TTGGCACATGAAGCTGTTGG+AGG - chr4_3:72160838-72160857 Msa0661000:CDS 50.0%
TGGCACATGAAGCTGTTGGA+GGG - chr4_3:72160839-72160858 Msa0661000:CDS 50.0%
!!! GGTTTTGGAGTCACTGTGGT+TGG - chr4_3:72160860-72160879 Msa0661000:CDS 50.0%
GTTGAGCCATGTTTGGAAGG+TGG - chr4_3:72160966-72160985 Msa0661000:CDS 50.0%
CCAAACCCACCTTCCAAACA+TGG + chr4_3:72160975-72160994 None:intergenic 50.0%
! CCATGTTTGGAAGGTGGGTT+TGG - chr4_3:72160972-72160991 Msa0661000:CDS 50.0%
ATGGGTGTGTGCTATGGTGA+TGG + chr4_3:72159154-72159173 None:intergenic 50.0%
AATCGCAGCAAGTCCAGTTC+TGG + chr4_3:72160328-72160347 None:intergenic 50.0%
ACTCGGGTCGAATAACCCAA+AGG + chr4_3:72160714-72160733 None:intergenic 50.0%
TTGGCACATGAAGCTGTTGG+AGG - chr4_3:72160838-72160857 Msa0661000:CDS 50.0%
TGGCACATGAAGCTGTTGGA+GGG - chr4_3:72160839-72160858 Msa0661000:CDS 50.0%
!!! GGTTTTGGAGTCACTGTGGT+TGG - chr4_3:72160860-72160879 Msa0661000:CDS 50.0%
GTTGAGCCATGTTTGGAAGG+TGG - chr4_3:72160966-72160985 Msa0661000:CDS 50.0%
CCAAACCCACCTTCCAAACA+TGG + chr4_3:72160975-72160994 None:intergenic 50.0%
! CCATGTTTGGAAGGTGGGTT+TGG - chr4_3:72160972-72160991 Msa0661000:CDS 50.0%
!! AAGGGACTTGGTGCCAGAAC+TGG - chr4_3:72160312-72160331 Msa0661000:intron 55.0%
GTAGAGGACCTATGGGGAAG+AGG + chr4_3:72160507-72160526 None:intergenic 55.0%
!!! GGAGGGTTTTGGAGTCACTG+TGG - chr4_3:72160856-72160875 Msa0661000:CDS 55.0%
!! AAGGGACTTGGTGCCAGAAC+TGG - chr4_3:72160312-72160331 Msa0661000:intron 55.0%
GTAGAGGACCTATGGGGAAG+AGG + chr4_3:72160507-72160526 None:intergenic 55.0%
!!! GGAGGGTTTTGGAGTCACTG+TGG - chr4_3:72160856-72160875 Msa0661000:CDS 55.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 72159045 72161300 72159045 ID=Msa0661000;Name=Msa0661000
chr4_3 mRNA 72159045 72161300 72159045 ID=Msa0661000-mRNA-1;Parent=Msa0661000;Name=Msa0661000-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.5|0.33|1|1|1|3|118|432
chr4_3 exon 72159045 72160043 72159045 ID=Msa0661000-mRNA-1:exon:21636;Parent=Msa0661000-mRNA-1
chr4_3 exon 72160818 72161049 72160818 ID=Msa0661000-mRNA-1:exon:21635;Parent=Msa0661000-mRNA-1
chr4_3 exon 72161115 72161300 72161115 ID=Msa0661000-mRNA-1:exon:21634;Parent=Msa0661000-mRNA-1
chr4_3 CDS 72161115 72161300 72161115 ID=Msa0661000-mRNA-1:cds;Parent=Msa0661000-mRNA-1
chr4_3 CDS 72160818 72161049 72160818 ID=Msa0661000-mRNA-1:cds;Parent=Msa0661000-mRNA-1
chr4_3 CDS 72159163 72160043 72159163 ID=Msa0661000-mRNA-1:cds;Parent=Msa0661000-mRNA-1
chr4_3 three_prime_UTR 72159045 72159162 72159045 ID=Msa0661000-mRNA-1:three_prime_utr;Parent=Msa0661000-mRNA-1
Gene Sequence

>Msa0661000

ATGGAAACTCAAACTAGGCACCGTTTGGTTCTAATATCACCACCTTTACAAGGCCACATAACTCCTATGCTTCAACTAGCCACCATCCTTCATTCAAAAGGTTTCTCCATCACCATAGCACACACCCATTTCAATTCCCCTGATCCTTCTAATCATCCTAATTTCTATTTTTTACTTTCTCCGATGTGCGTATCTTCACTTAAGGAGACATTAGTTCATTATATTACAAAATTAGCAAATGAAAATCATGGTGAAAAAATTGCTTGCATCATCTATGATGGATTTTTGTCCTTCATCGATTCTTTGGCCAAGGAACTAAAGCTACCAAGCATAGTCTTTCGAACCACTAGTGCTACTAATTTACTCACTTACCATGTGTGTCTTCAACTACAAAGCAAAGGTTACCTTCCATTGCAAGATTCAAAGTCAAGGGACTTGGTGCCAGAACTGGACTTGCTGCGATTCAAAGATCTACCCCTTTTTAATTTGACAAATCAACATGATTTTCTACAAAGCATAGCAAAAACACTTTCAATAACACCTTTGGGTGTTATATTTAACACTGTGGAAAGCTTAGAAGATTCATCACTAAACCAACTCCAAAAGCTATACAAAGTTAACCTCTTCCCCATAGGTCCTCTACACATGATTGCCAATGATGCTAACAATACTAGTAGCATTCTGCAAAAAAGTGATAATTGTATATCTTGGCTAAACAACAAAGCAAAAAATTCTGTGTTATATGTAAGTTTGGGAAGCATAGCTAGTTGGGAAGAGAAAGAGCTAACTGAAGTTGCTTGTGGCTTAGTCAACAGCAGACAAAATTTCCTTTGGGTTATTCGACCCGAGTCAATCAACGATGTTTCAGCATGGTTAGAATCTTTGCCAGAAGATGTTAAAGTAGGTGTAGCTGAGAGAGGCTGTGTTGTGAAATGGGCACCTCAAAGTGAAGTTTTGGCACATGAAGCTGTTGGAGGGTTTTGGAGTCACTGTGGTTGGAATTCTACATTGGAGAGTTTGTGTGAGGGAGTGCCAATTATTTGTCAACCTTATTTTGGAGATCAGAGGGTAAATGCAAGGTTGTTGAGCCATGTTTGGAAGGTGGGTTTGGAATGGTGTAATGTAATAGAAAGGGATGAGATTGAAAGGGTGGTTAGAAGACTTATGGTGAATTCAGAAGGGGAGTTGATGAGCCAAAGAGCAACAGAATTGAAGCATGAAATTGGGATAGCTGTGAAGGGTTCCTCATGTGATGCACTAAATGGGTTGGTAAAGTATATCTTATCACTGAATGTCTGA
Protein sequence

>Msa0661000

METQTRHRLVLISPPLQGHITPMLQLATILHSKGFSITIAHTHFNSPDPSNHPNFYFLLSPMCVSSLKETLVHYITKLANENHGEKIACIIYDGFLSFIDSLAKELKLPSIVFRTTSATNLLTYHVCLQLQSKGYLPLQDSKSRDLVPELDLLRFKDLPLFNLTNQHDFLQSIAKTLSITPLGVIFNTVESLEDSSLNQLQKLYKVNLFPIGPLHMIANDANNTSSILQKSDNCISWLNNKAKNSVLYVSLGSIASWEEKELTEVACGLVNSRQNFLWVIRPESINDVSAWLESLPEDVKVGVAERGCVVKWAPQSEVLAHEAVGGFWSHCGWNSTLESLCEGVPIICQPYFGDQRVNARLLSHVWKVGLEWCNVIERDEIERVVRRLMVNSEGELMSQRATELKHEIGIAVKGSSCDALNGLVKYILSLNV*