Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0668270 | XP_003604737.1 | 92.012 | 651 | 8 | 1 | 1 | 651 | 1 | 607 | 0.0 | 1222 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0668270 | sp|Q9M040|PDC4_ARATH | 82.886 | 596 | 98 | 2 | 1 | 596 | 1 | 592 | 0.0 | 1038 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0668270 | G7JQ58 | 92.012 | 651 | 8 | 1 | 1 | 651 | 1 | 607 | 0.0 | 1222 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0630180 | Msa0668270 | 0.855534 | 5.915694e-62 | -8.615850e-47 |
| Msa0630200 | Msa0668270 | 0.825175 | 5.409795e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0668270 | MtrunA17_Chr4g0007071 | 92.012 | 651 | 8 | 1 | 1 | 651 | 1 | 607 | 0.0 | 1222 |
| Msa0668270 | MtrunA17_Chr5g0420011 | 91.859 | 651 | 9 | 1 | 1 | 651 | 1 | 607 | 0.0 | 1220 |
| Msa0668270 | MtrunA17_Chr7g0242961 | 80.031 | 651 | 82 | 4 | 1 | 651 | 1 | 603 | 0.0 | 1053 |
| Msa0668270 | MtrunA17_Chr7g0242981 | 76.994 | 652 | 86 | 5 | 1 | 651 | 1 | 589 | 0.0 | 998 |
| Msa0668270 | MtrunA17_Chr2g0283471 | 79.041 | 563 | 118 | 0 | 34 | 596 | 9 | 571 | 0.0 | 939 |
| Msa0668270 | MtrunA17_Chr2g0279461 | 63.514 | 222 | 52 | 2 | 40 | 232 | 44 | 265 | 2.25e-96 | 297 |
| Msa0668270 | MtrunA17_Chr2g0279471 | 71.296 | 108 | 31 | 0 | 489 | 596 | 17 | 124 | 3.94e-50 | 170 |
| Msa0668270 | MtrunA17_Chr3g0132201 | 23.670 | 545 | 353 | 18 | 22 | 535 | 58 | 570 | 4.29e-22 | 101 |
| Msa0668270 | MtrunA17_Chr2g0290681 | 23.063 | 555 | 378 | 16 | 40 | 563 | 55 | 591 | 3.87e-18 | 88.6 |
| Msa0668270 | MtrunA17_Chr2g0281881 | 22.200 | 509 | 350 | 15 | 51 | 535 | 88 | 574 | 1.23e-16 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0668270 | AT5G01320.1 | 82.886 | 596 | 98 | 2 | 1 | 596 | 1 | 592 | 0.0 | 1038 |
| Msa0668270 | AT4G33070.1 | 76.723 | 653 | 104 | 5 | 1 | 651 | 1 | 607 | 0.0 | 1033 |
| Msa0668270 | AT5G54960.1 | 76.263 | 653 | 107 | 3 | 1 | 651 | 1 | 607 | 0.0 | 1023 |
| Msa0668270 | AT5G01330.1 | 82.818 | 582 | 96 | 3 | 17 | 596 | 2 | 581 | 0.0 | 1000 |
| Msa0668270 | AT3G48560.1 | 21.875 | 512 | 348 | 14 | 51 | 535 | 103 | 589 | 4.08e-15 | 79.3 |
Find 172 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGCCTAATTCTAATGATTT+TGG | 0.114847 | 4_4:+9186581 | Msa0668270:CDS |
| ATTAAGCTGAGATTACTTTA+AGG | 0.146349 | 4_4:+9192063 | Msa0668270:three_prime_UTR |
| AACATTTCATTGGAACGTTT+TGG | 0.238749 | 4_4:+9187907 | Msa0668270:CDS |
| TACTTTGGAGACAAGGAAAA+TGG | 0.246632 | 4_4:-9187590 | None:intergenic |
| CTGCTTATGAGAATTATTTC+AGG | 0.247181 | 4_4:+9188165 | Msa0668270:CDS |
| CGATTATTGTTCAGCCTGAT+AGG | 0.276114 | 4_4:+9188054 | Msa0668270:CDS |
| CATTGGTGATGGAAGTTTCC+AGG | 0.279678 | 4_4:+9188717 | Msa0668270:CDS |
| AAGCATAAGCAATCTTTCTT+TGG | 0.284489 | 4_4:-9189310 | None:intergenic |
| AGAATTCTTCATCATACTAT+TGG | 0.294152 | 4_4:+9186611 | Msa0668270:CDS |
| AAGCATAAACAATCCTTCTT+TGG | 0.294164 | 4_4:-9191887 | None:intergenic |
| TCTGAAGTTCACTGAGGATT+AGG | 0.300037 | 4_4:-9191995 | None:intergenic |
| GTCCCAAAATCATTAGAATT+AGG | 0.303299 | 4_4:-9186584 | None:intergenic |
| CAAAAGATTAATTACCTTAG+TGG | 0.314883 | 4_4:-9189083 | None:intergenic |
| GCAGATGGCATGACGGAATA+TGG | 0.315658 | 4_4:-9187858 | None:intergenic |
| CGGATATGCTCAAGCTGTTC+CGG | 0.328908 | 4_4:+9188675 | Msa0668270:CDS |
| TGAAAATAGGTCCAGCAAAT+AGG | 0.336734 | 4_4:-9187983 | None:intergenic |
| ATTACTTACCCACATCCTTT+TGG | 0.345387 | 4_4:-9188344 | None:intergenic |
| AAGCAGTATTATTCCTCTTA+AGG | 0.352231 | 4_4:-9188148 | None:intergenic |
| CAGCTTATGCTTATGTAAAC+AGG | 0.355575 | 4_4:-9187521 | None:intergenic |
| GATTTCAAAGGCAAACCTTC+AGG | 0.356531 | 4_4:-9188197 | None:intergenic |
| TCTCCAATCACAACCCTATC+AGG | 0.360164 | 4_4:-9188068 | None:intergenic |
| TATGAGTTCCAGATGCAATA+TGG | 0.362998 | 4_4:+9188622 | Msa0668270:CDS |
| CAGATGCAATATGGTTCAAT+TGG | 0.366605 | 4_4:+9188631 | Msa0668270:CDS |
| GAGGATCACAAACATTTCAT+TGG | 0.372783 | 4_4:+9187897 | Msa0668270:CDS |
| GAACTGTAATCATTGAAAAT+AGG | 0.384366 | 4_4:-9187996 | None:intergenic |
| CAGTTCTTGATAACATTGTA+TGG | 0.391023 | 4_4:-9189007 | None:intergenic |
| GCTGATGCATACCTATTTGC+TGG | 0.395610 | 4_4:+9187972 | Msa0668270:CDS |
| GAAGCTAGGGATTGGGTTGA+AGG | 0.395680 | 4_4:-9186260 | None:intergenic |
| ATTGGAGATGGTCCTACATT+TGG | 0.399314 | 4_4:+9188083 | Msa0668270:CDS |
| CTGATGGTTATGCAAGGTCT+AGG | 0.408121 | 4_4:+9186453 | Msa0668270:CDS |
| TCAGCTTCGGTTCCGCGATC+AGG | 0.414869 | 4_4:-9186388 | None:intergenic |
| CTGAACCTAGAGAGCCTTTG+AGG | 0.417588 | 4_4:+9188219 | Msa0668270:CDS |
| ATTGTTAATCAAGAAGATTA+TGG | 0.422543 | 4_4:-9188948 | None:intergenic |
| GATTACTTTAAGGATACTTA+AGG | 0.423000 | 4_4:+9192073 | Msa0668270:three_prime_UTR |
| CAATTGAACCATATTGCATC+TGG | 0.423310 | 4_4:-9188630 | None:intergenic |
| TCTGGAAACACCTAAGTTCC+TGG | 0.424227 | 4_4:-9186649 | None:intergenic |
| TTGCCAGTGATTTGTATTGT+TGG | 0.427170 | 4_4:+9186557 | Msa0668270:CDS |
| CAAGCAATCACTCGCTTCTC+CGG | 0.431538 | 4_4:-9188694 | None:intergenic |
| TAGCAAAGAGTTGCTTGAAT+GGG | 0.434683 | 4_4:+9189363 | Msa0668270:CDS |
| TAGCAAAGAGTTGCTTGAAT+GGG | 0.434683 | 4_4:+9191940 | Msa0668270:CDS |
| GAAGCAATTCAGACAGCAAC+AGG | 0.436338 | 4_4:+9189286 | Msa0668270:CDS |
| TTCAGATGAAGCTAGGGATT+GGG | 0.437372 | 4_4:-9186267 | None:intergenic |
| CGCTCGCAAAGCGCCTTAAG+AGG | 0.438690 | 4_4:+9188135 | Msa0668270:CDS |
| AGTTGCTTGAATGGGGATCA+AGG | 0.443953 | 4_4:+9189371 | Msa0668270:CDS |
| AGTTGCTTGAATGGGGATCA+AGG | 0.443953 | 4_4:+9191948 | Msa0668270:CDS |
| CTGAAATTGCCAAAAGGATG+TGG | 0.445246 | 4_4:+9188335 | Msa0668270:CDS |
| AGCGTGATTAATGCAATTGC+TGG | 0.447921 | 4_4:+9186518 | Msa0668270:CDS |
| TTCAATGATTACAGTTCTGT+TGG | 0.449416 | 4_4:+9188002 | Msa0668270:CDS |
| CATACAATGTTATCAAGAAC+TGG | 0.450936 | 4_4:+9189008 | Msa0668270:CDS |
| CTAGCAAAGAGTTGCTTGAA+TGG | 0.452164 | 4_4:+9189362 | Msa0668270:CDS |
| CTAGCAAAGAGTTGCTTGAA+TGG | 0.452164 | 4_4:+9191939 | Msa0668270:CDS |
| TTGTGCCGAGATTGTGGAAT+CGG | 0.455522 | 4_4:+9187950 | Msa0668270:CDS |
| TGATGGTTATGCAAGGTCTA+GGG | 0.455953 | 4_4:+9186454 | Msa0668270:CDS |
| CTAAGTTCCTGGCTAAAATC+AGG | 0.456762 | 4_4:-9186638 | None:intergenic |
| ATTCAGATGAAGCTAGGGAT+TGG | 0.458364 | 4_4:-9186268 | None:intergenic |
| ACTGCTGTTATTGCCGAGAC+AGG | 0.459219 | 4_4:+9188287 | Msa0668270:CDS |
| GGAGACAAGGAAAATGGAAC+AGG | 0.460250 | 4_4:-9187584 | None:intergenic |
| TTCGGACCGGCTACTAGTAC+TGG | 0.460290 | 4_4:-9187777 | None:intergenic |
| GGCAGCAGTGGAAGCAGCTG+CGG | 0.462599 | 4_4:+9187731 | Msa0668270:CDS |
| CCAGACTGTTACTTGCTACC+AGG | 0.464384 | 4_4:+9186667 | Msa0668270:CDS |
| CATTGAGGTGATTGTTCACA+AGG | 0.471803 | 4_4:+9189333 | Msa0668270:CDS |
| CATTGAGGTGATTGTTCACA+AGG | 0.471803 | 4_4:+9191910 | Msa0668270:CDS |
| ATGAAATGTTTGTGATCCTC+AGG | 0.472515 | 4_4:-9187894 | None:intergenic |
| CAGTGATTTGTATTGTTGGT+GGG | 0.474712 | 4_4:+9186561 | Msa0668270:CDS |
| CAAGGTCAGGTTGAAGTCAC+CGG | 0.476652 | 4_4:-9186357 | None:intergenic |
| TTATGCAAGGTCTAGGGGTG+TGG | 0.478805 | 4_4:+9186460 | Msa0668270:CDS |
| GAAGCAATTCAGACAGCAAA+AGG | 0.479164 | 4_4:+9191863 | Msa0668270:CDS |
| TATGCAAGGTCTAGGGGTGT+GGG | 0.481246 | 4_4:+9186461 | Msa0668270:CDS |
| GTTGTTACATTTACTGTTGG+TGG | 0.484847 | 4_4:+9186491 | Msa0668270:CDS |
| TTAACCCTCAAAGGCTCTCT+AGG | 0.484853 | 4_4:-9188224 | None:intergenic |
| TTGTTACATTTACTGTTGGT+GGG | 0.485744 | 4_4:+9186492 | Msa0668270:CDS |
| ATTGAGTAATCCAATGGGAT+TGG | 0.486444 | 4_4:+9187707 | Msa0668270:CDS |
| ACTGCTGCCTCCAATCCCAT+TGG | 0.487915 | 4_4:-9187717 | None:intergenic |
| CCTGGTAGCAAGTAACAGTC+TGG | 0.488780 | 4_4:-9186667 | None:intergenic |
| CTTCCACTAGTCGTCGGGCT+AGG | 0.488846 | 4_4:-9186307 | None:intergenic |
| ACAGGTTCACGGCTGAAAGT+AGG | 0.491232 | 4_4:-9187566 | None:intergenic |
| TGCTACTCTTAGTTTCGGAC+CGG | 0.492737 | 4_4:-9187790 | None:intergenic |
| AAGCTAGGGATTGGGTTGAA+GGG | 0.497192 | 4_4:-9186259 | None:intergenic |
| TGCTGTAACGAACTGAATGC+CGG | 0.499481 | 4_4:+9186422 | Msa0668270:CDS |
| CAGGTTCACGGCTGAAAGTA+GGG | 0.500437 | 4_4:-9187565 | None:intergenic |
| ACAATGGTCAAGGAAATTGC+TGG | 0.500572 | 4_4:+9189059 | Msa0668270:CDS |
| TGCAATATGGTTCAATTGGA+TGG | 0.502043 | 4_4:+9188635 | Msa0668270:CDS |
| CCAGTGATTTGTATTGTTGG+TGG | 0.502339 | 4_4:+9186560 | Msa0668270:CDS |
| GACAGCAAAAGGACCAAAGA+AGG | 0.503015 | 4_4:+9191874 | Msa0668270:CDS |
| TCCGTCATGCCATCTGCTAA+AGG | 0.505379 | 4_4:+9187864 | Msa0668270:CDS |
| CAGCCTGATAGGGTTGTGAT+TGG | 0.505425 | 4_4:+9188065 | Msa0668270:CDS |
| GTCGGGCTAGGTGACTGCCT+AGG | 0.506771 | 4_4:-9186295 | None:intergenic |
| TCAGGTGGTCGAGCAAGGTC+AGG | 0.508264 | 4_4:-9186370 | None:intergenic |
| AGCAATTTCCTTGACCATTG+TGG | 0.508734 | 4_4:-9189057 | None:intergenic |
| GAACTGGAATTACACTGGCT+TGG | 0.508806 | 4_4:+9189024 | Msa0668270:CDS |
| TAACATTGTATGGTCCATCA+TGG | 0.509244 | 4_4:-9188997 | None:intergenic |
| GGGTTGATTCAGATGAAGCT+AGG | 0.509627 | 4_4:-9186274 | None:intergenic |
| AAATAACCATTCAAAAGCAT+TGG | 0.510545 | 4_4:-9192183 | None:intergenic |
| TGCATGATTCGAGGGATCCT+AGG | 0.513172 | 4_4:-9186169 | None:intergenic |
| GGTTCAATTGGATGGTCTGT+TGG | 0.514958 | 4_4:+9188643 | Msa0668270:CDS |
| ATAACCATCAGCAGCATATC+CGG | 0.517807 | 4_4:-9186441 | None:intergenic |
| AGGAAAATGGAACAGGTTCA+CGG | 0.519353 | 4_4:-9187577 | None:intergenic |
| AATTGTCTTATTGAGTTGAA+CGG | 0.522122 | 4_4:+9192120 | Msa0668270:three_prime_UTR |
| ACCGACTTCCACTAGTCGTC+GGG | 0.522284 | 4_4:-9186312 | None:intergenic |
| TGAACCTAGAGAGCCTTTGA+GGG | 0.523049 | 4_4:+9188220 | Msa0668270:CDS |
| TGACAGATTGAGTAATCCAA+TGG | 0.525959 | 4_4:+9187701 | Msa0668270:intron |
| TCGGGCTAGGTGACTGCCTA+GGG | 0.525974 | 4_4:-9186294 | None:intergenic |
| TTGCCGAGACAGGGGACTCA+TGG | 0.526361 | 4_4:+9188297 | Msa0668270:CDS |
| GATTATTGTTCAGCCTGATA+GGG | 0.526387 | 4_4:+9188055 | Msa0668270:CDS |
| CGCGATCAGGTGGTCGAGCA+AGG | 0.527311 | 4_4:-9186375 | None:intergenic |
| GACAGATTGAGTAATCCAAT+GGG | 0.528687 | 4_4:+9187702 | Msa0668270:intron |
| ATAACAACACCTTCATCAAA+CGG | 0.529906 | 4_4:+9186212 | Msa0668270:CDS |
| TGTGTTGTTACATTTACTGT+TGG | 0.530399 | 4_4:+9186488 | Msa0668270:CDS |
| AGCTAGGGATTGGGTTGAAG+GGG | 0.531081 | 4_4:-9186258 | None:intergenic |
| AGGAAATTGCTGGACCACTA+AGG | 0.533010 | 4_4:+9189069 | Msa0668270:CDS |
| ATAGGCTGTGGTCAACAACT+TGG | 0.534954 | 4_4:+9187442 | Msa0668270:intron |
| TGGTCTGTTGGTGCAACTCT+CGG | 0.535873 | 4_4:+9188655 | Msa0668270:CDS |
| ACCGACATCTTCACCGTCCC+CGG | 0.536179 | 4_4:+9186338 | Msa0668270:CDS |
| GAGTAATCCAATGGGATTGG+AGG | 0.536971 | 4_4:+9187710 | Msa0668270:CDS |
| CAAAAGCTGAAATTGCCAAA+AGG | 0.537401 | 4_4:+9188329 | Msa0668270:CDS |
| GGAATTAGTCCTTTAGCAGA+TGG | 0.539613 | 4_4:-9187873 | None:intergenic |
| TCACCTAGCCCGACGACTAG+TGG | 0.542677 | 4_4:+9186304 | Msa0668270:CDS |
| ATCAGCCGATTCCACAATCT+CGG | 0.548115 | 4_4:-9187955 | None:intergenic |
| GAAGTTCACTGAGGATTAGG+TGG | 0.550945 | 4_4:-9191992 | None:intergenic |
| GTGATTGCTTGCATTGGTGA+TGG | 0.552907 | 4_4:+9188706 | Msa0668270:CDS |
| AAAAGAACATTAACCCTCAA+AGG | 0.553752 | 4_4:-9188233 | None:intergenic |
| AATGGGATTGGAGGCAGCAG+TGG | 0.555789 | 4_4:+9187719 | Msa0668270:CDS |
| GTTGCTTGAATGGGGATCAA+GGG | 0.556008 | 4_4:+9189372 | Msa0668270:CDS |
| GTTGCTTGAATGGGGATCAA+GGG | 0.556008 | 4_4:+9191949 | Msa0668270:CDS |
| ATTGAAGTTGAAATCCATGA+TGG | 0.557098 | 4_4:+9188983 | Msa0668270:CDS |
| AAGGTCAGGTTGAAGTCACC+GGG | 0.557415 | 4_4:-9186356 | None:intergenic |
| GGTTGATTCAGATGAAGCTA+GGG | 0.561038 | 4_4:-9186273 | None:intergenic |
| AAACCATGAGTCCCCTGTCT+CGG | 0.564220 | 4_4:-9188300 | None:intergenic |
| GATAGGGTTGTGATTGGAGA+TGG | 0.564456 | 4_4:+9188071 | Msa0668270:CDS |
| CTGCTGTTATTGCCGAGACA+GGG | 0.566446 | 4_4:+9188288 | Msa0668270:CDS |
| CAGGTTGAAGTCACCGGGGA+CGG | 0.567996 | 4_4:-9186351 | None:intergenic |
| ATGGTGATTTGCATGATTCG+AGG | 0.568880 | 4_4:-9186178 | None:intergenic |
| ATAATCTTCTTGATTAACAA+TGG | 0.571801 | 4_4:+9188950 | Msa0668270:CDS |
| ATCAAAACACATCCAAATGT+AGG | 0.572453 | 4_4:-9188095 | None:intergenic |
| AAGCGAGTGATTGCTTGCAT+TGG | 0.574293 | 4_4:+9188700 | Msa0668270:CDS |
| AGATTGCTTATGCTTCATTG+AGG | 0.577157 | 4_4:+9189318 | Msa0668270:CDS |
| GATGCTATCCACAATGGTCA+AGG | 0.577985 | 4_4:+9189049 | Msa0668270:CDS |
| GAAACAGTGCCGTTTGATGA+AGG | 0.578220 | 4_4:-9186221 | None:intergenic |
| GTTGTTATTATGTCGTTGCA+TGG | 0.581178 | 4_4:-9186197 | None:intergenic |
| CCACCAACAATACAAATCAC+TGG | 0.581447 | 4_4:-9186560 | None:intergenic |
| GGATTGTTTATGCTTCATTG+AGG | 0.581782 | 4_4:+9191895 | Msa0668270:CDS |
| GCTTCATCTGAATCAACCCT+AGG | 0.593184 | 4_4:+9186278 | Msa0668270:CDS |
| TACCGACTTCCACTAGTCGT+CGG | 0.594116 | 4_4:-9186313 | None:intergenic |
| ATCAAGAACTGGAATTACAC+TGG | 0.595089 | 4_4:+9189019 | Msa0668270:CDS |
| TGGTGATTTGCATGATTCGA+GGG | 0.596910 | 4_4:-9186177 | None:intergenic |
| TCCTTTAGCAGATGGCATGA+CGG | 0.599896 | 4_4:-9187865 | None:intergenic |
| GCTGAAAGTAGGGTGAGGAA+TGG | 0.602836 | 4_4:-9187555 | None:intergenic |
| CTGTCCACATCTCAGCATTG+TGG | 0.605032 | 4_4:-9188921 | None:intergenic |
| GCTTCGGTTCCGCGATCAGG+TGG | 0.605721 | 4_4:-9186385 | None:intergenic |
| TCTCTAGGTTCAGATTTCAA+AGG | 0.609595 | 4_4:-9188209 | None:intergenic |
| ATCTTCTTGATTAACAATGG+CGG | 0.609761 | 4_4:+9188953 | Msa0668270:CDS |
| AAAATCTTACTTTGGAGACA+AGG | 0.611605 | 4_4:-9187597 | None:intergenic |
| GTGAAACCAGTACTAGTAGC+CGG | 0.613433 | 4_4:+9187771 | Msa0668270:CDS |
| TGCTGTTATTGCCGAGACAG+GGG | 0.619008 | 4_4:+9188289 | Msa0668270:CDS |
| TTCAACATGGACACAAACCT+AGG | 0.622509 | 4_4:+9186152 | Msa0668270:exon |
| AGCAAAGAGTTGCTTGAATG+GGG | 0.623231 | 4_4:+9189364 | Msa0668270:CDS |
| AGCAAAGAGTTGCTTGAATG+GGG | 0.623231 | 4_4:+9191941 | Msa0668270:CDS |
| GATGGTTATGCAAGGTCTAG+GGG | 0.628881 | 4_4:+9186455 | Msa0668270:CDS |
| TCACGGCTGAAAGTAGGGTG+AGG | 0.630951 | 4_4:-9187560 | None:intergenic |
| TGAAATTGCCAAAAGGATGT+GGG | 0.632720 | 4_4:+9188336 | Msa0668270:CDS |
| TTATATGTAGGTGACAGCAC+AGG | 0.638117 | 4_4:+9188892 | Msa0668270:intron |
| AAGTTCACTGAGGATTAGGT+GGG | 0.639249 | 4_4:-9191991 | None:intergenic |
| GTGTCCACAATGCTGAGATG+TGG | 0.644135 | 4_4:+9188917 | Msa0668270:CDS |
| CTTGCTCGACCACCTGATCG+CGG | 0.651003 | 4_4:+9186376 | Msa0668270:CDS |
| ACCGGGGACGGTGAAGATGT+CGG | 0.651929 | 4_4:-9186339 | None:intergenic |
| ATGCTGCTGATGGTTATGCA+AGG | 0.654095 | 4_4:+9186447 | Msa0668270:CDS |
| TGCTAAAGGACTAATTCCTG+AGG | 0.659904 | 4_4:+9187878 | Msa0668270:CDS |
| AATGCCGGATATGCTGCTGA+TGG | 0.680087 | 4_4:+9186437 | Msa0668270:CDS |
| GCCCGACGACTAGTGGAAGT+CGG | 0.688394 | 4_4:+9186311 | Msa0668270:CDS |
| TAAATTTCTGAAGTTCACTG+AGG | 0.695310 | 4_4:-9192001 | None:intergenic |
| TTGGTTGATGCTATCCACAA+TGG | 0.702445 | 4_4:+9189043 | Msa0668270:CDS |
| AGGTCAGGTTGAAGTCACCG+GGG | 0.790969 | 4_4:-9186355 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAAAATAAAATT+AGG | - | chr4_4:9186719-9186738 | None:intergenic | 0.0% |
| !!! | AATTTTATTTTTTTATTTTT+AGG | + | chr4_4:9186719-9186738 | Msa0668270:intron | 0.0% |
| !! | AAAAATAGTATTATTATTGT+TGG | + | chr4_4:9186810-9186829 | Msa0668270:intron | 10.0% |
| !! | TTATAAAACTATTATTATCA+GGG | - | chr4_4:9186837-9186856 | None:intergenic | 10.0% |
| !! | TTTATAAAACTATTATTATC+AGG | - | chr4_4:9186838-9186857 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGCAT+CGG | - | chr4_4:9189785-9189804 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAGTCTAT+CGG | + | chr4_4:9189792-9189811 | Msa0668270:intron | 10.0% |
| !! | AAAACTTATTTATATATGAA+AGG | - | chr4_4:9189966-9189985 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAATTAAGGAATT+AGG | + | chr4_4:9189984-9190003 | Msa0668270:intron | 10.0% |
| !!! | AAAAAAAAAAAATCTAAAAC+GGG | - | chr4_4:9190103-9190122 | None:intergenic | 10.0% |
| !!! | TTTTTAATGTAAAATAAGAT+AGG | - | chr4_4:9190292-9190311 | None:intergenic | 10.0% |
| !!! | CATATATTTTTTTTTTTTTG+TGG | - | chr4_4:9191486-9191505 | None:intergenic | 10.0% |
| !!! | TTAATTTGTATATTTGATTA+TGG | + | chr4_4:9191813-9191832 | Msa0668270:intron | 10.0% |
| !! | TTTCAAATCTTATAAGTAAA+AGG | - | chr4_4:9186791-9186810 | None:intergenic | 15.0% |
| !! | AAATTTGTCTGATTATAATT+TGG | + | chr4_4:9187159-9187178 | Msa0668270:intron | 15.0% |
| !!! | AGTAAAAATCAATATTTTCA+AGG | + | chr4_4:9187203-9187222 | Msa0668270:intron | 15.0% |
| !!! | ATGTTTTCTAAATTATATGT+AGG | + | chr4_4:9188880-9188899 | Msa0668270:intron | 15.0% |
| !! | TTTATATATTTGATTATGGT+AGG | + | chr4_4:9189240-9189259 | Msa0668270:intron | 15.0% |
| !!! | ATCTATTATCTACTTTTTTA+TGG | + | chr4_4:9189646-9189665 | Msa0668270:intron | 15.0% |
| !! | AATTTCTAATGTAAAACTAT+AGG | - | chr4_4:9190242-9190261 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTTTTTTTGTGG+TGG | - | chr4_4:9191483-9191502 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTTTTTTTGTGG+TGG | - | chr4_4:9191535-9191554 | None:intergenic | 15.0% |
| !!! | TAAGGAATATTTTATTTTGT+TGG | + | chr4_4:9192091-9192110 | Msa0668270:three_prime_UTR | 15.0% |
| !!! | ATGTATTATTGTTGTTTTGT+TGG | + | chr4_4:9186887-9186906 | Msa0668270:intron | 20.0% |
| !!! | TGTAAAAAGTTTTCAAGTAT+AGG | + | chr4_4:9186971-9186990 | Msa0668270:intron | 20.0% |
| !! | AAACCAAATCTTATCAAATA+TGG | - | chr4_4:9187292-9187311 | None:intergenic | 20.0% |
| !!! | ATAAGATTTGGTTTACTATT+TGG | + | chr4_4:9187298-9187317 | Msa0668270:intron | 20.0% |
| !! | ATTGATTGAATGTGTTAAAA+TGG | + | chr4_4:9187397-9187416 | Msa0668270:intron | 20.0% |
| !! | TTATGAGTAAAATCTTACTT+TGG | - | chr4_4:9187608-9187627 | None:intergenic | 20.0% |
| !!! | TCTTAATTTCATTTTTGACT+TGG | + | chr4_4:9187650-9187669 | Msa0668270:intron | 20.0% |
| !! | AATCTGTCAAAAGTTATTAT+TGG | - | chr4_4:9187690-9187709 | None:intergenic | 20.0% |
| !!! | TAGAATTTGATTTTTGGTAT+TGG | + | chr4_4:9188373-9188392 | Msa0668270:intron | 20.0% |
| !! | CATAATAGAAACAGTTTAAT+CGG | - | chr4_4:9188863-9188882 | None:intergenic | 20.0% |
| !! | ATTGTTAATCAAGAAGATTA+TGG | - | chr4_4:9188951-9188970 | None:intergenic | 20.0% |
| !! | ATAATCTTCTTGATTAACAA+TGG | + | chr4_4:9188950-9188969 | Msa0668270:CDS | 20.0% |
| !! | TTTAAATCAACTTATTTCAG+AGG | - | chr4_4:9189754-9189773 | None:intergenic | 20.0% |
| !!! | AATTAGGTTTTTAGGAATAT+TGG | + | chr4_4:9190413-9190432 | Msa0668270:intron | 20.0% |
| !! | ATTGAAGAATAATGAATGTA+TGG | + | chr4_4:9190669-9190688 | Msa0668270:intron | 20.0% |
| !! | CTTTATGAATGTTAAAAATG+TGG | + | chr4_4:9190757-9190776 | Msa0668270:intron | 20.0% |
| !!! | TAAGAAACTTTTCACTTTTT+TGG | - | chr4_4:9191165-9191184 | None:intergenic | 20.0% |
| !!! | TGTTATTGAGTTATTGATTT+TGG | - | chr4_4:9191584-9191603 | None:intergenic | 20.0% |
| !!! | CAATAACTCAATAACAATTT+TGG | + | chr4_4:9191588-9191607 | Msa0668270:intron | 20.0% |
| !!! | TTATTTTCAAAAGAAATTGC+TGG | + | chr4_4:9191672-9191691 | Msa0668270:intron | 20.0% |
| !! | TTTGTATATTTGATTATGGT+AGG | + | chr4_4:9191817-9191836 | Msa0668270:intron | 20.0% |
| !!! | CTTTTGAATGGTTATTTTAT+AGG | + | chr4_4:9189612-9189631 | Msa0668270:intron | 20.0% |
| !!! | AAAGTTTTTTGATGTGTTTG+AGG | - | chr4_4:9186117-9186136 | None:intergenic | 25.0% |
| ! | AGAATTCTTCATCATACTAT+TGG | + | chr4_4:9186611-9186630 | Msa0668270:CDS | 25.0% |
| !!! | AAAGTTTTCAAGTATAGGTT+CGG | + | chr4_4:9186976-9186995 | Msa0668270:intron | 25.0% |
| ! | ATATGATTGCTCAATTTGAA+TGG | + | chr4_4:9187263-9187282 | Msa0668270:intron | 25.0% |
| ! | TGTCCATATTTGATAAGATT+TGG | + | chr4_4:9187286-9187305 | Msa0668270:intron | 25.0% |
| !!! | CTCATAAATCTGCATTTTTT+TGG | + | chr4_4:9187354-9187373 | Msa0668270:intron | 25.0% |
| ! | TAAAATGGCTTATATGTACT+TGG | + | chr4_4:9187412-9187431 | Msa0668270:intron | 25.0% |
| !! | TATGTACTTGGTTTGATTAT+AGG | + | chr4_4:9187424-9187443 | Msa0668270:intron | 25.0% |
| ! | GAACTGTAATCATTGAAAAT+AGG | - | chr4_4:9187999-9188018 | None:intergenic | 25.0% |
| !!! | AGCTTCTAGAATTTGATTTT+TGG | + | chr4_4:9188367-9188386 | Msa0668270:intron | 25.0% |
| !!! | CGTAGCATATTTTGATAAAA+AGG | + | chr4_4:9188586-9188605 | Msa0668270:intron | 25.0% |
| ! | AAAAATGTGCTAGGAAAATT+TGG | - | chr4_4:9188810-9188829 | None:intergenic | 25.0% |
| ! | GTATTATTAAGTAGAAGCTT+AGG | - | chr4_4:9188836-9188855 | None:intergenic | 25.0% |
| ! | CAAAAGATTAATTACCTTAG+TGG | - | chr4_4:9189086-9189105 | None:intergenic | 25.0% |
| ! | TTTCATATTTAACAACAGTG+AGG | - | chr4_4:9189136-9189155 | None:intergenic | 25.0% |
| ! | ATTAAGCTGAGATTACTTTA+AGG | + | chr4_4:9189486-9189505 | Msa0668270:intron | 25.0% |
| !! | ATTACTTTAAGGATACTTGA+GGG | + | chr4_4:9189497-9189516 | Msa0668270:intron | 25.0% |
| !!! | TGAGGGATATTTTATTTTGT+TGG | + | chr4_4:9189514-9189533 | Msa0668270:intron | 25.0% |
| !!! | AATTGTTTGATTGAGTTGAA+CGG | + | chr4_4:9189543-9189562 | Msa0668270:intron | 25.0% |
| !! | AAATAACCATTCAAAAGCAT+TGG | - | chr4_4:9189609-9189628 | None:intergenic | 25.0% |
| ! | ATTATTATCAAGGATCTACT+TGG | - | chr4_4:9189718-9189737 | None:intergenic | 25.0% |
| ! | TATATGAAAGGCTAAAACAA+TGG | - | chr4_4:9189954-9189973 | None:intergenic | 25.0% |
| !!! | ATTTTTTTAACAATCGTTCC+TGG | + | chr4_4:9190339-9190358 | Msa0668270:intron | 25.0% |
| !!! | TTTTTTTAACAATCGTTCCT+GGG | + | chr4_4:9190340-9190359 | Msa0668270:intron | 25.0% |
| ! | TGTAGAGAAATATTGTTAGA+GGG | - | chr4_4:9190578-9190597 | None:intergenic | 25.0% |
| ! | AATCATTGTAAAAGATAGTG+GGG | - | chr4_4:9190614-9190633 | None:intergenic | 25.0% |
| ! | GAATCATTGTAAAAGATAGT+GGG | - | chr4_4:9190615-9190634 | None:intergenic | 25.0% |
| ! | ATTGAAAAGAATCAAAATGC+TGG | + | chr4_4:9190981-9191000 | Msa0668270:intron | 25.0% |
| ! | GCATGATTGAATTATACTAT+TGG | - | chr4_4:9191095-9191114 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr4_4:9191190-9191209 | Msa0668270:intron | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr4_4:9191190-9191209 | None:intergenic | 25.0% |
| !! | ACATTACGTGTCTTTTATAA+AGG | - | chr4_4:9191307-9191326 | None:intergenic | 25.0% |
| ! | GACAATGCATAATATATGTA+AGG | + | chr4_4:9191438-9191457 | Msa0668270:intron | 25.0% |
| ! | ATTAAGCTGAGATTACTTTA+AGG | + | chr4_4:9189486-9189505 | Msa0668270:intron | 25.0% |
| !! | GATTACTTTAAGGATACTTA+AGG | + | chr4_4:9192073-9192092 | Msa0668270:three_prime_UTR | 25.0% |
| !!! | AATTGTCTTATTGAGTTGAA+CGG | + | chr4_4:9192120-9192139 | Msa0668270:three_prime_UTR | 25.0% |
| !! | AAATAACCATTCAAAAGCAT+TGG | - | chr4_4:9189609-9189628 | None:intergenic | 25.0% |
| !!! | CTCTCTCATTTTTTTCAACA+TGG | + | chr4_4:9186139-9186158 | Msa0668270:exon | 30.0% |
| ATAACAACACCTTCATCAAA+CGG | + | chr4_4:9186212-9186231 | Msa0668270:CDS | 30.0% | |
| ! | TGTGTTGTTACATTTACTGT+TGG | + | chr4_4:9186488-9186507 | Msa0668270:CDS | 30.0% |
| TTGTTACATTTACTGTTGGT+GGG | + | chr4_4:9186492-9186511 | Msa0668270:CDS | 30.0% | |
| ! | GGCCTAATTCTAATGATTTT+GGG | + | chr4_4:9186582-9186601 | Msa0668270:CDS | 30.0% |
| GTCCCAAAATCATTAGAATT+AGG | - | chr4_4:9186587-9186606 | None:intergenic | 30.0% | |
| TTTCATACCTATACTAGCTA+AGG | - | chr4_4:9186745-9186764 | None:intergenic | 30.0% | |
| ATGCAGATTTATGAGAAGAA+AGG | - | chr4_4:9187349-9187368 | None:intergenic | 30.0% | |
| ! | AAAATCTTACTTTGGAGACA+AGG | - | chr4_4:9187600-9187619 | None:intergenic | 30.0% |
| ! | AACATTTCATTGGAACGTTT+TGG | + | chr4_4:9187907-9187926 | Msa0668270:CDS | 30.0% |
| ! | ACATTTCATTGGAACGTTTT+GGG | + | chr4_4:9187908-9187927 | Msa0668270:CDS | 30.0% |
| TTCAATGATTACAGTTCTGT+TGG | + | chr4_4:9188002-9188021 | Msa0668270:CDS | 30.0% | |
| ATCAAAACACATCCAAATGT+AGG | - | chr4_4:9188098-9188117 | None:intergenic | 30.0% | |
| !!! | ATTTGGATGTGTTTTGATGA+AGG | + | chr4_4:9188100-9188119 | Msa0668270:CDS | 30.0% |
| AAGCAGTATTATTCCTCTTA+AGG | - | chr4_4:9188151-9188170 | None:intergenic | 30.0% | |
| CTGCTTATGAGAATTATTTC+AGG | + | chr4_4:9188165-9188184 | Msa0668270:CDS | 30.0% | |
| AAAAGAACATTAACCCTCAA+AGG | - | chr4_4:9188236-9188255 | None:intergenic | 30.0% | |
| AGCTGCATTTAACTACAATT+TGG | - | chr4_4:9188443-9188462 | None:intergenic | 30.0% | |
| ATCTTCTTGATTAACAATGG+CGG | + | chr4_4:9188953-9188972 | Msa0668270:CDS | 30.0% | |
| ATTGAAGTTGAAATCCATGA+TGG | + | chr4_4:9188983-9189002 | Msa0668270:CDS | 30.0% | |
| ! | CAGTTCTTGATAACATTGTA+TGG | - | chr4_4:9189010-9189029 | None:intergenic | 30.0% |
| CATACAATGTTATCAAGAAC+TGG | + | chr4_4:9189008-9189027 | Msa0668270:CDS | 30.0% | |
| ! | CTCATTTTCATATGAAGTGT+CGG | + | chr4_4:9189191-9189210 | Msa0668270:intron | 30.0% |
| AAGCATAAGCAATCTTTCTT+TGG | - | chr4_4:9189313-9189332 | None:intergenic | 30.0% | |
| !! | TAAATTTCTGAAGTTCACTG+AGG | - | chr4_4:9189427-9189446 | None:intergenic | 30.0% |
| ! | GATTACTTTAAGGATACTTG+AGG | + | chr4_4:9189496-9189515 | Msa0668270:intron | 30.0% |
| CATGATATTGTGTTTAGTGT+TGG | + | chr4_4:9189677-9189696 | Msa0668270:intron | 30.0% | |
| AGCAAGAGCAATTATTATCA+AGG | - | chr4_4:9189728-9189747 | None:intergenic | 30.0% | |
| GTTACTCTTCGATAAATTGA+TGG | + | chr4_4:9189849-9189868 | Msa0668270:intron | 30.0% | |
| CAAGAATGAAAATTGCTCTA+TGG | - | chr4_4:9189898-9189917 | None:intergenic | 30.0% | |
| ! | AGAGCAATTTTCATTCTTGA+TGG | + | chr4_4:9189899-9189918 | Msa0668270:intron | 30.0% |
| ! | GAGCAATTTTCATTCTTGAT+GGG | + | chr4_4:9189900-9189919 | Msa0668270:intron | 30.0% |
| GCATACAAATTCTATTCTTG+TGG | + | chr4_4:9189922-9189941 | Msa0668270:intron | 30.0% | |
| !! | AGCGTTGTTGATAATTATAG+TGG | + | chr4_4:9190453-9190472 | Msa0668270:intron | 30.0% |
| GTGTAGAGAAATATTGTTAG+AGG | - | chr4_4:9190579-9190598 | None:intergenic | 30.0% | |
| GGAATCATTGTAAAAGATAG+TGG | - | chr4_4:9190616-9190635 | None:intergenic | 30.0% | |
| TGATGAAAGTTTGAGAAATC+AGG | + | chr4_4:9190800-9190819 | Msa0668270:intron | 30.0% | |
| GCACTTTCTGTAAAAAGAAT+TGG | - | chr4_4:9190960-9190979 | None:intergenic | 30.0% | |
| ! | TGGCATGACTATATATGTTT+TGG | - | chr4_4:9191117-9191136 | None:intergenic | 30.0% |
| ! | AAGTTTCTTACATTTGAGAC+CGG | - | chr4_4:9191264-9191283 | None:intergenic | 30.0% |
| ! | AAGTTTCTTACATTTGAGAC+CGG | + | chr4_4:9191264-9191283 | Msa0668270:intron | 30.0% |
| CATAATATATGTAAGGTCTG+AGG | + | chr4_4:9191445-9191464 | Msa0668270:intron | 30.0% | |
| !!! | TTTTTTTTTTTGTGGTGGCT+GGG | - | chr4_4:9191478-9191497 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTTTGTGGTGGC+TGG | - | chr4_4:9191479-9191498 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTTTGTGGTGGC+TGG | - | chr4_4:9191479-9191498 | None:intergenic | 30.0% |
| ! | CACAATATTTTCTCAAACAC+TGG | + | chr4_4:9191733-9191752 | Msa0668270:intron | 30.0% |
| ! | CACATTTTCATATGAAGTGT+TGG | + | chr4_4:9191768-9191787 | Msa0668270:intron | 30.0% |
| !!! | ATTTTCATATGAAGTGTTGG+TGG | + | chr4_4:9191771-9191790 | Msa0668270:intron | 30.0% |
| AAGCATAAACAATCCTTCTT+TGG | - | chr4_4:9191890-9191909 | None:intergenic | 30.0% | |
| !! | TAAATTTCTGAAGTTCACTG+AGG | - | chr4_4:9189427-9189446 | None:intergenic | 30.0% |
| ! | GTTGTTATTATGTCGTTGCA+TGG | - | chr4_4:9186200-9186219 | None:intergenic | 35.0% |
| GTTGTTACATTTACTGTTGG+TGG | + | chr4_4:9186491-9186510 | Msa0668270:CDS | 35.0% | |
| ! | TTGCCAGTGATTTGTATTGT+TGG | + | chr4_4:9186557-9186576 | Msa0668270:CDS | 35.0% |
| ! | CAGTGATTTGTATTGTTGGT+GGG | + | chr4_4:9186561-9186580 | Msa0668270:CDS | 35.0% |
| ! | GGGCCTAATTCTAATGATTT+TGG | + | chr4_4:9186581-9186600 | Msa0668270:CDS | 35.0% |
| !! | AGAGAGATTGAGTTGAGATT+TGG | - | chr4_4:9186694-9186713 | None:intergenic | 35.0% |
| ! | TTTTAGGCCTTAGCTAGTAT+AGG | + | chr4_4:9186735-9186754 | Msa0668270:intron | 35.0% |
| CAGCTTATGCTTATGTAAAC+AGG | - | chr4_4:9187524-9187543 | None:intergenic | 35.0% | |
| ! | TACTTTGGAGACAAGGAAAA+TGG | - | chr4_4:9187593-9187612 | None:intergenic | 35.0% |
| TGACAGATTGAGTAATCCAA+TGG | + | chr4_4:9187701-9187720 | Msa0668270:intron | 35.0% | |
| GACAGATTGAGTAATCCAAT+GGG | + | chr4_4:9187702-9187721 | Msa0668270:intron | 35.0% | |
| ATTGAGTAATCCAATGGGAT+TGG | + | chr4_4:9187707-9187726 | Msa0668270:CDS | 35.0% | |
| ! | GCTTTTGCTACTCTTAGTTT+CGG | - | chr4_4:9187798-9187817 | None:intergenic | 35.0% |
| ATGAAATGTTTGTGATCCTC+AGG | - | chr4_4:9187897-9187916 | None:intergenic | 35.0% | |
| GAGGATCACAAACATTTCAT+TGG | + | chr4_4:9187897-9187916 | Msa0668270:CDS | 35.0% | |
| ! | CATTTCATTGGAACGTTTTG+GGG | + | chr4_4:9187909-9187928 | Msa0668270:CDS | 35.0% |
| TGAAAATAGGTCCAGCAAAT+AGG | - | chr4_4:9187986-9188005 | None:intergenic | 35.0% | |
| GATTATTGTTCAGCCTGATA+GGG | + | chr4_4:9188055-9188074 | Msa0668270:CDS | 35.0% | |
| ! | TTCAGGATTTTTGTTCCTGA+AGG | + | chr4_4:9188182-9188201 | Msa0668270:CDS | 35.0% |
| TCTCTAGGTTCAGATTTCAA+AGG | - | chr4_4:9188212-9188231 | None:intergenic | 35.0% | |
| ! | CTTTTGGCAATTTCAGCTTT+TGG | - | chr4_4:9188331-9188350 | None:intergenic | 35.0% |
| CAAAAGCTGAAATTGCCAAA+AGG | + | chr4_4:9188329-9188348 | Msa0668270:CDS | 35.0% | |
| TGAAATTGCCAAAAGGATGT+GGG | + | chr4_4:9188336-9188355 | Msa0668270:CDS | 35.0% | |
| ! | ATTACTTACCCACATCCTTT+TGG | - | chr4_4:9188347-9188366 | None:intergenic | 35.0% |
| TGCAATTAAGGTCACATAAG+CGG | - | chr4_4:9188468-9188487 | None:intergenic | 35.0% | |
| TATGAGTTCCAGATGCAATA+TGG | + | chr4_4:9188622-9188641 | Msa0668270:CDS | 35.0% | |
| CAATTGAACCATATTGCATC+TGG | - | chr4_4:9188633-9188652 | None:intergenic | 35.0% | |
| CAGATGCAATATGGTTCAAT+TGG | + | chr4_4:9188631-9188650 | Msa0668270:CDS | 35.0% | |
| TGCAATATGGTTCAATTGGA+TGG | + | chr4_4:9188635-9188654 | Msa0668270:CDS | 35.0% | |
| CTTAGGAGAAAAAATGTGCT+AGG | - | chr4_4:9188819-9188838 | None:intergenic | 35.0% | |
| TAACATTGTATGGTCCATCA+TGG | - | chr4_4:9189000-9189019 | None:intergenic | 35.0% | |
| ATCAAGAACTGGAATTACAC+TGG | + | chr4_4:9189019-9189038 | Msa0668270:CDS | 35.0% | |
| CACAATTCTTTCTCAAACAC+CGG | + | chr4_4:9189156-9189175 | Msa0668270:intron | 35.0% | |
| AGATTGCTTATGCTTCATTG+AGG | + | chr4_4:9189318-9189337 | Msa0668270:CDS | 35.0% | |
| TAGCAAAGAGTTGCTTGAAT+GGG | + | chr4_4:9189363-9189382 | Msa0668270:CDS | 35.0% | |
| !! | AGCATTGGTGCAAAAAAAGT+TGG | - | chr4_4:9189594-9189613 | None:intergenic | 35.0% |
| ! | TTTGCACCAATGCTTTTGAA+TGG | + | chr4_4:9189600-9189619 | Msa0668270:intron | 35.0% |
| ! | ATTGTGTTTAGTGTTGGATC+AGG | + | chr4_4:9189683-9189702 | Msa0668270:intron | 35.0% |
| !! | GACTTTTGAGAAAAACTGAG+CGG | + | chr4_4:9189871-9189890 | Msa0668270:intron | 35.0% |
| !! | ACTTTTGAGAAAAACTGAGC+GGG | + | chr4_4:9189872-9189891 | Msa0668270:intron | 35.0% |
| AAAGGCTAAAACAATGGCTT+GGG | - | chr4_4:9189948-9189967 | None:intergenic | 35.0% | |
| TGTCAGTTCAGATTGTAACT+TGG | + | chr4_4:9190374-9190393 | Msa0668270:intron | 35.0% | |
| GTCAGTTCAGATTGTAACTT+GGG | + | chr4_4:9190375-9190394 | Msa0668270:intron | 35.0% | |
| TCAGTTCAGATTGTAACTTG+GGG | + | chr4_4:9190376-9190395 | Msa0668270:intron | 35.0% | |
| ! | GGGGTTTGAATTAGGTTTTT+AGG | + | chr4_4:9190405-9190424 | Msa0668270:intron | 35.0% |
| AAATATTGTTAGAGGGCCTT+GGG | - | chr4_4:9190571-9190590 | None:intergenic | 35.0% | |
| TACAATGATTCCACCAACAA+TGG | + | chr4_4:9190624-9190643 | Msa0668270:intron | 35.0% | |
| AAAAACCTTCTCACCATTGT+TGG | - | chr4_4:9190640-9190659 | None:intergenic | 35.0% | |
| ATAATGAATGTATGGCCGAT+TGG | + | chr4_4:9190677-9190696 | Msa0668270:intron | 35.0% | |
| ATCAAAGCATAACAGCCAAT+CGG | - | chr4_4:9190695-9190714 | None:intergenic | 35.0% | |
| ! | AATGCACCATCATTTTCCAA+CGG | - | chr4_4:9191027-9191046 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTTGTGGTGGCTG+GGG | - | chr4_4:9191477-9191496 | None:intergenic | 35.0% |
| GAGAAGCTTAATTACCTTAG+TGG | - | chr4_4:9191699-9191718 | None:intergenic | 35.0% | |
| GGATTGTTTATGCTTCATTG+AGG | + | chr4_4:9191895-9191914 | Msa0668270:CDS | 35.0% | |
| TAGCAAAGAGTTGCTTGAAT+GGG | + | chr4_4:9189363-9189382 | Msa0668270:CDS | 35.0% | |
| !! | AGCATTGGTGCAAAAAAAGT+TGG | - | chr4_4:9189594-9189613 | None:intergenic | 35.0% |
| ! | TTTGCACCAATGCTTTTGAA+TGG | + | chr4_4:9189600-9189619 | Msa0668270:intron | 35.0% |
| TTCAACATGGACACAAACCT+AGG | + | chr4_4:9186152-9186171 | Msa0668270:exon | 40.0% | |
| ! | TGGTGATTTGCATGATTCGA+GGG | - | chr4_4:9186180-9186199 | None:intergenic | 40.0% |
| ! | ATGGTGATTTGCATGATTCG+AGG | - | chr4_4:9186181-9186200 | None:intergenic | 40.0% |
| !! | TGAAGGGGATTTTTGGATTG+TGG | - | chr4_4:9186246-9186265 | None:intergenic | 40.0% |
| !!! | ATTGGGTTGAAGGGGATTTT+TGG | - | chr4_4:9186253-9186272 | None:intergenic | 40.0% |
| TTCAGATGAAGCTAGGGATT+GGG | - | chr4_4:9186270-9186289 | None:intergenic | 40.0% | |
| ATTCAGATGAAGCTAGGGAT+TGG | - | chr4_4:9186271-9186290 | None:intergenic | 40.0% | |
| ! | GGTTGATTCAGATGAAGCTA+GGG | - | chr4_4:9186276-9186295 | None:intergenic | 40.0% |
| ATAACCATCAGCAGCATATC+CGG | - | chr4_4:9186444-9186463 | None:intergenic | 40.0% | |
| TGATGGTTATGCAAGGTCTA+GGG | + | chr4_4:9186454-9186473 | Msa0668270:CDS | 40.0% | |
| AGCGTGATTAATGCAATTGC+TGG | + | chr4_4:9186518-9186537 | Msa0668270:CDS | 40.0% | |
| CCACCAACAATACAAATCAC+TGG | - | chr4_4:9186563-9186582 | None:intergenic | 40.0% | |
| ! | CCAGTGATTTGTATTGTTGG+TGG | + | chr4_4:9186560-9186579 | Msa0668270:CDS | 40.0% |
| CTAAGTTCCTGGCTAAAATC+AGG | - | chr4_4:9186641-9186660 | None:intergenic | 40.0% | |
| !! | CTGATTTTAGCCAGGAACTT+AGG | + | chr4_4:9186639-9186658 | Msa0668270:CDS | 40.0% |
| !! | ATTGAGTTGAGATTTGGACC+TGG | - | chr4_4:9186688-9186707 | None:intergenic | 40.0% |
| ! | CTTGGTTTGATTATAGGCTG+TGG | + | chr4_4:9187430-9187449 | Msa0668270:intron | 40.0% |
| AGGAAAATGGAACAGGTTCA+CGG | - | chr4_4:9187580-9187599 | None:intergenic | 40.0% | |
| GGAATTAGTCCTTTAGCAGA+TGG | - | chr4_4:9187876-9187895 | None:intergenic | 40.0% | |
| TGCTAAAGGACTAATTCCTG+AGG | + | chr4_4:9187878-9187897 | Msa0668270:CDS | 40.0% | |
| CGATTATTGTTCAGCCTGAT+AGG | + | chr4_4:9188054-9188073 | Msa0668270:CDS | 40.0% | |
| ATTGGAGATGGTCCTACATT+TGG | + | chr4_4:9188083-9188102 | Msa0668270:CDS | 40.0% | |
| GATTTCAAAGGCAAACCTTC+AGG | - | chr4_4:9188200-9188219 | None:intergenic | 40.0% | |
| CTGAAATTGCCAAAAGGATG+TGG | + | chr4_4:9188335-9188354 | Msa0668270:CDS | 40.0% | |
| CCTCAATGCAACTGCAATTA+AGG | - | chr4_4:9188480-9188499 | None:intergenic | 40.0% | |
| CCTTAATTGCAGTTGCATTG+AGG | + | chr4_4:9188477-9188496 | Msa0668270:intron | 40.0% | |
| TATGATGTGCAAGACAAACC+TGG | - | chr4_4:9188738-9188757 | None:intergenic | 40.0% | |
| TTATATGTAGGTGACAGCAC+AGG | + | chr4_4:9188892-9188911 | Msa0668270:intron | 40.0% | |
| ! | TTGGTTGATGCTATCCACAA+TGG | + | chr4_4:9189043-9189062 | Msa0668270:CDS | 40.0% |
| AGCAATTTCCTTGACCATTG+TGG | - | chr4_4:9189060-9189079 | None:intergenic | 40.0% | |
| ACAATGGTCAAGGAAATTGC+TGG | + | chr4_4:9189059-9189078 | Msa0668270:CDS | 40.0% | |
| ! | ATGGTAGGTCTTTTGTGAAG+AGG | + | chr4_4:9189255-9189274 | Msa0668270:intron | 40.0% |
| CATTGAGGTGATTGTTCACA+AGG | + | chr4_4:9189333-9189352 | Msa0668270:CDS | 40.0% | |
| CTAGCAAAGAGTTGCTTGAA+TGG | + | chr4_4:9189362-9189381 | Msa0668270:CDS | 40.0% | |
| AGCAAAGAGTTGCTTGAATG+GGG | + | chr4_4:9189364-9189383 | Msa0668270:CDS | 40.0% | |
| ! | TCTGAAGTTCACTGAGGATT+AGG | - | chr4_4:9189421-9189440 | None:intergenic | 40.0% |
| GAAAGGCTAAAACAATGGCT+TGG | - | chr4_4:9189949-9189968 | None:intergenic | 40.0% | |
| ! | ACGGGCTGCATAACAAATTT+AGG | - | chr4_4:9190085-9190104 | None:intergenic | 40.0% |
| CTGACATATATGTATGACCC+AGG | - | chr4_4:9190360-9190379 | None:intergenic | 40.0% | |
| CAGTTCAGATTGTAACTTGG+GGG | + | chr4_4:9190377-9190396 | Msa0668270:intron | 40.0% | |
| AGTTCAGATTGTAACTTGGG+GGG | + | chr4_4:9190378-9190397 | Msa0668270:intron | 40.0% | |
| ACAAAGCAACCTTAATCCCA+AGG | + | chr4_4:9190552-9190571 | Msa0668270:intron | 40.0% | |
| GAAATATTGTTAGAGGGCCT+TGG | - | chr4_4:9190572-9190591 | None:intergenic | 40.0% | |
| ! | TTCTTACATTTGAGACCGGA+GGG | - | chr4_4:9191268-9191287 | None:intergenic | 40.0% |
| ! | TTTCTTACATTTGAGACCGG+AGG | - | chr4_4:9191267-9191286 | None:intergenic | 40.0% |
| ! | TTTCTTACATTTGAGACCGG+AGG | + | chr4_4:9191267-9191286 | Msa0668270:intron | 40.0% |
| ! | TTCTTACATTTGAGACCGGA+GGG | + | chr4_4:9191268-9191287 | Msa0668270:intron | 40.0% |
| AAGAAATTGCTGGACCACTA+AGG | + | chr4_4:9191682-9191701 | Msa0668270:intron | 40.0% | |
| ! | ATGGTAGGTCTTTTGTGAAG+AGG | + | chr4_4:9189255-9189274 | Msa0668270:intron | 40.0% |
| GAAGCAATTCAGACAGCAAA+AGG | + | chr4_4:9191863-9191882 | Msa0668270:CDS | 40.0% | |
| CATTGAGGTGATTGTTCACA+AGG | + | chr4_4:9189333-9189352 | Msa0668270:CDS | 40.0% | |
| CTAGCAAAGAGTTGCTTGAA+TGG | + | chr4_4:9189362-9189381 | Msa0668270:CDS | 40.0% | |
| AGCAAAGAGTTGCTTGAATG+GGG | + | chr4_4:9189364-9189383 | Msa0668270:CDS | 40.0% | |
| AAGTTCACTGAGGATTAGGT+GGG | - | chr4_4:9191994-9192013 | None:intergenic | 40.0% | |
| ! | TCTGAAGTTCACTGAGGATT+AGG | - | chr4_4:9189421-9189440 | None:intergenic | 40.0% |
| !! | GAAACAGTGCCGTTTGATGA+AGG | - | chr4_4:9186224-9186243 | None:intergenic | 45.0% |
| !! | AAGCTAGGGATTGGGTTGAA+GGG | - | chr4_4:9186262-9186281 | None:intergenic | 45.0% |
| ! | GGGTTGATTCAGATGAAGCT+AGG | - | chr4_4:9186277-9186296 | None:intergenic | 45.0% |
| GCTTCATCTGAATCAACCCT+AGG | + | chr4_4:9186278-9186297 | Msa0668270:CDS | 45.0% | |
| GAACCGAAGCTGAAAAACGT+CGG | + | chr4_4:9186398-9186417 | Msa0668270:CDS | 45.0% | |
| !! | CAACCGACGTTTTTCAGCTT+CGG | - | chr4_4:9186404-9186423 | None:intergenic | 45.0% |
| TGCTGTAACGAACTGAATGC+CGG | + | chr4_4:9186422-9186441 | Msa0668270:CDS | 45.0% | |
| ATGCTGCTGATGGTTATGCA+AGG | + | chr4_4:9186447-9186466 | Msa0668270:CDS | 45.0% | |
| CTGATGGTTATGCAAGGTCT+AGG | + | chr4_4:9186453-9186472 | Msa0668270:CDS | 45.0% | |
| GATGGTTATGCAAGGTCTAG+GGG | + | chr4_4:9186455-9186474 | Msa0668270:CDS | 45.0% | |
| !! | TGGTTTGCCTGATTTTAGCC+AGG | + | chr4_4:9186631-9186650 | Msa0668270:CDS | 45.0% |
| TCTGGAAACACCTAAGTTCC+TGG | - | chr4_4:9186652-9186671 | None:intergenic | 45.0% | |
| ATAGGCTGTGGTCAACAACT+TGG | + | chr4_4:9187442-9187461 | Msa0668270:intron | 45.0% | |
| GGAGACAAGGAAAATGGAAC+AGG | - | chr4_4:9187587-9187606 | None:intergenic | 45.0% | |
| GAGTAATCCAATGGGATTGG+AGG | + | chr4_4:9187710-9187729 | Msa0668270:CDS | 45.0% | |
| GTGAAACCAGTACTAGTAGC+CGG | + | chr4_4:9187771-9187790 | Msa0668270:CDS | 45.0% | |
| TGCTACTCTTAGTTTCGGAC+CGG | - | chr4_4:9187793-9187812 | None:intergenic | 45.0% | |
| TCCTTTAGCAGATGGCATGA+CGG | - | chr4_4:9187868-9187887 | None:intergenic | 45.0% | |
| ! | TGCATTTTGTGCCGAGATTG+TGG | + | chr4_4:9187944-9187963 | Msa0668270:CDS | 45.0% |
| TTGTGCCGAGATTGTGGAAT+CGG | + | chr4_4:9187950-9187969 | Msa0668270:CDS | 45.0% | |
| ! | ATCAGCCGATTCCACAATCT+CGG | - | chr4_4:9187958-9187977 | None:intergenic | 45.0% |
| GCTGATGCATACCTATTTGC+TGG | + | chr4_4:9187972-9187991 | Msa0668270:CDS | 45.0% | |
| TCTCCAATCACAACCCTATC+AGG | - | chr4_4:9188071-9188090 | None:intergenic | 45.0% | |
| GATAGGGTTGTGATTGGAGA+TGG | + | chr4_4:9188071-9188090 | Msa0668270:CDS | 45.0% | |
| TGAACCTAGAGAGCCTTTGA+GGG | + | chr4_4:9188220-9188239 | Msa0668270:CDS | 45.0% | |
| TTAACCCTCAAAGGCTCTCT+AGG | - | chr4_4:9188227-9188246 | None:intergenic | 45.0% | |
| CAGTTGCATTGAGGTCACAT+AGG | + | chr4_4:9188486-9188505 | Msa0668270:intron | 45.0% | |
| GGTTCAATTGGATGGTCTGT+TGG | + | chr4_4:9188643-9188662 | Msa0668270:CDS | 45.0% | |
| AAGCGAGTGATTGCTTGCAT+TGG | + | chr4_4:9188700-9188719 | Msa0668270:CDS | 45.0% | |
| ! | GTGATTGCTTGCATTGGTGA+TGG | + | chr4_4:9188706-9188725 | Msa0668270:CDS | 45.0% |
| !! | CATTGGTGATGGAAGTTTCC+AGG | + | chr4_4:9188717-9188736 | Msa0668270:CDS | 45.0% |
| ! | GAACTGGAATTACACTGGCT+TGG | + | chr4_4:9189024-9189043 | Msa0668270:CDS | 45.0% |
| GATGCTATCCACAATGGTCA+AGG | + | chr4_4:9189049-9189068 | Msa0668270:CDS | 45.0% | |
| AGGAAATTGCTGGACCACTA+AGG | + | chr4_4:9189069-9189088 | Msa0668270:CDS | 45.0% | |
| GAAGCAATTCAGACAGCAAC+AGG | + | chr4_4:9189286-9189305 | Msa0668270:CDS | 45.0% | |
| AGTTGCTTGAATGGGGATCA+AGG | + | chr4_4:9189371-9189390 | Msa0668270:CDS | 45.0% | |
| GTTGCTTGAATGGGGATCAA+GGG | + | chr4_4:9189372-9189391 | Msa0668270:CDS | 45.0% | |
| TTCACTGAGGATTAGGAGGA+CGG | - | chr4_4:9189414-9189433 | None:intergenic | 45.0% | |
| GAAGTTCACTGAGGATTAGG+AGG | - | chr4_4:9189418-9189437 | None:intergenic | 45.0% | |
| GTTCAGATTGTAACTTGGGG+GGG | + | chr4_4:9190379-9190398 | Msa0668270:intron | 45.0% | |
| TTCAGATTGTAACTTGGGGG+GGG | + | chr4_4:9190380-9190399 | Msa0668270:intron | 45.0% | |
| ATGTACCCTGAGGTTTAGAG+GGG | - | chr4_4:9190481-9190500 | None:intergenic | 45.0% | |
| GATGTACCCTGAGGTTTAGA+GGG | - | chr4_4:9190482-9190501 | None:intergenic | 45.0% | |
| ACATAGTGAATTCCTTCGCG+AGG | - | chr4_4:9190518-9190537 | None:intergenic | 45.0% | |
| !! | AAGATAGTGGGGTGCTATCT+TGG | - | chr4_4:9190603-9190622 | None:intergenic | 45.0% |
| TTCCACCAACAATGGTGAGA+AGG | + | chr4_4:9190632-9190651 | Msa0668270:intron | 45.0% | |
| AACCTTCTCACCATTGTTGG+TGG | - | chr4_4:9190637-9190656 | None:intergenic | 45.0% | |
| CGGTCAGCATATCTGAATCA+CGG | - | chr4_4:9191007-9191026 | None:intergenic | 45.0% | |
| GATTCAGATATGCTGACCGT+TGG | + | chr4_4:9191008-9191027 | Msa0668270:intron | 45.0% | |
| TGCTGACCGTTGGAAAATGA+TGG | + | chr4_4:9191018-9191037 | Msa0668270:intron | 45.0% | |
| GCCAAAACATATACTCCCTC+CGG | + | chr4_4:9191133-9191152 | Msa0668270:intron | 45.0% | |
| !! | ACCGGAGGGAGTATATGTTT+TGG | - | chr4_4:9191137-9191156 | None:intergenic | 45.0% |
| GGCATAATATGTACTCCCTC+CGG | - | chr4_4:9191286-9191305 | None:intergenic | 45.0% | |
| CGAGCTTAGCTCAATTGGTA+TGG | + | chr4_4:9191395-9191414 | Msa0668270:intron | 45.0% | |
| GGTATGGAGCTTAGCTCAAT+TGG | + | chr4_4:9191411-9191430 | Msa0668270:intron | 45.0% | |
| GGAGCTTAGCTCAATTGGTA+TGG | + | chr4_4:9191416-9191435 | Msa0668270:intron | 45.0% | |
| !!! | TTTTTTGTGGTGGCTGGTTG+TGG | - | chr4_4:9191525-9191544 | None:intergenic | 45.0% |
| GACAGCAAAAGGACCAAAGA+AGG | + | chr4_4:9191874-9191893 | Msa0668270:CDS | 45.0% | |
| AGTTGCTTGAATGGGGATCA+AGG | + | chr4_4:9189371-9189390 | Msa0668270:CDS | 45.0% | |
| GTTGCTTGAATGGGGATCAA+GGG | + | chr4_4:9189372-9189391 | Msa0668270:CDS | 45.0% | |
| GAAGTTCACTGAGGATTAGG+TGG | - | chr4_4:9189418-9189437 | None:intergenic | 45.0% | |
| !! | TATTATTGTAATATTATAAT+TGG | + | chr4_4:9187071-9187090 | Msa0668270:intron | 5.0% |
| !! | ATTATTGTAATATTATAATT+GGG | + | chr4_4:9187072-9187091 | Msa0668270:intron | 5.0% |
| !! | AAATAATATTATAATATGAT+TGG | + | chr4_4:9187102-9187121 | Msa0668270:intron | 5.0% |
| !! | ATAATTTATATATTTGATTA+TGG | + | chr4_4:9189236-9189255 | Msa0668270:intron | 5.0% |
| !!! | ATAAGTTTTTTTTTTAATTA+AGG | + | chr4_4:9189977-9189996 | Msa0668270:intron | 5.0% |
| !! | AAAAAAAAAAAAATCTAAAA+CGG | - | chr4_4:9190104-9190123 | None:intergenic | 5.0% |
| !!! | ATATATTTTTTTTTTTTTTG+TGG | - | chr4_4:9191538-9191557 | None:intergenic | 5.0% |
| TGCATGATTCGAGGGATCCT+AGG | - | chr4_4:9186172-9186191 | None:intergenic | 50.0% | |
| !! | AGCTAGGGATTGGGTTGAAG+GGG | - | chr4_4:9186261-9186280 | None:intergenic | 50.0% |
| !! | GAAGCTAGGGATTGGGTTGA+AGG | - | chr4_4:9186263-9186282 | None:intergenic | 50.0% |
| !! | TACCGACTTCCACTAGTCGT+CGG | - | chr4_4:9186316-9186335 | None:intergenic | 50.0% |
| !! | AAGGTCAGGTTGAAGTCACC+GGG | - | chr4_4:9186359-9186378 | None:intergenic | 50.0% |
| !! | CAAGGTCAGGTTGAAGTCAC+CGG | - | chr4_4:9186360-9186379 | None:intergenic | 50.0% |
| AATGCCGGATATGCTGCTGA+TGG | + | chr4_4:9186437-9186456 | Msa0668270:CDS | 50.0% | |
| TTATGCAAGGTCTAGGGGTG+TGG | + | chr4_4:9186460-9186479 | Msa0668270:CDS | 50.0% | |
| ! | TATGCAAGGTCTAGGGGTGT+GGG | + | chr4_4:9186461-9186480 | Msa0668270:CDS | 50.0% |
| CCTGGTAGCAAGTAACAGTC+TGG | - | chr4_4:9186670-9186689 | None:intergenic | 50.0% | |
| ! | CCAGACTGTTACTTGCTACC+AGG | + | chr4_4:9186667-9186686 | Msa0668270:CDS | 50.0% |
| GCTGAAAGTAGGGTGAGGAA+TGG | - | chr4_4:9187558-9187577 | None:intergenic | 50.0% | |
| CAGGTTCACGGCTGAAAGTA+GGG | - | chr4_4:9187568-9187587 | None:intergenic | 50.0% | |
| ACAGGTTCACGGCTGAAAGT+AGG | - | chr4_4:9187569-9187588 | None:intergenic | 50.0% | |
| ! | GCAGATGGCATGACGGAATA+TGG | - | chr4_4:9187861-9187880 | None:intergenic | 50.0% |
| TCCGTCATGCCATCTGCTAA+AGG | + | chr4_4:9187864-9187883 | Msa0668270:CDS | 50.0% | |
| CAGCCTGATAGGGTTGTGAT+TGG | + | chr4_4:9188065-9188084 | Msa0668270:CDS | 50.0% | |
| CTGAACCTAGAGAGCCTTTG+AGG | + | chr4_4:9188219-9188238 | Msa0668270:CDS | 50.0% | |
| ACTGCTGTTATTGCCGAGAC+AGG | + | chr4_4:9188287-9188306 | Msa0668270:CDS | 50.0% | |
| CTGCTGTTATTGCCGAGACA+GGG | + | chr4_4:9188288-9188307 | Msa0668270:CDS | 50.0% | |
| TGCTGTTATTGCCGAGACAG+GGG | + | chr4_4:9188289-9188308 | Msa0668270:CDS | 50.0% | |
| AAACCATGAGTCCCCTGTCT+CGG | - | chr4_4:9188303-9188322 | None:intergenic | 50.0% | |
| TGGTCTGTTGGTGCAACTCT+CGG | + | chr4_4:9188655-9188674 | Msa0668270:CDS | 50.0% | |
| CGGATATGCTCAAGCTGTTC+CGG | + | chr4_4:9188675-9188694 | Msa0668270:CDS | 50.0% | |
| CAAGCAATCACTCGCTTCTC+CGG | - | chr4_4:9188697-9188716 | None:intergenic | 50.0% | |
| GTGTCCACAATGCTGAGATG+TGG | + | chr4_4:9188917-9188936 | Msa0668270:CDS | 50.0% | |
| CTGTCCACATCTCAGCATTG+TGG | - | chr4_4:9188924-9188943 | None:intergenic | 50.0% | |
| AAATGAGTCAGTGTCGCGTC+CGG | - | chr4_4:9189178-9189197 | None:intergenic | 50.0% | |
| TCAGATTGTAACTTGGGGGG+GGG | + | chr4_4:9190381-9190400 | Msa0668270:intron | 50.0% | |
| TGGTTCCCCTCTAAACCTCA+GGG | + | chr4_4:9190473-9190492 | Msa0668270:intron | 50.0% | |
| GGATGTACCCTGAGGTTTAG+AGG | - | chr4_4:9190483-9190502 | None:intergenic | 50.0% | |
| ATTCCTTCGCGAGGTGTGAA+GGG | - | chr4_4:9190509-9190528 | None:intergenic | 50.0% | |
| AATTCCTTCGCGAGGTGTGA+AGG | - | chr4_4:9190510-9190529 | None:intergenic | 50.0% | |
| GTTAGAGGGCCTTGGGATTA+AGG | - | chr4_4:9190564-9190583 | None:intergenic | 50.0% | |
| TCTCGCGAGCTTAGCTCAAT+TGG | + | chr4_4:9191390-9191409 | Msa0668270:intron | 50.0% | |
| ! | ACCGACTTCCACTAGTCGTC+GGG | - | chr4_4:9186315-9186334 | None:intergenic | 55.0% |
| !! | AGGTCAGGTTGAAGTCACCG+GGG | - | chr4_4:9186358-9186377 | None:intergenic | 55.0% |
| TCACGGCTGAAAGTAGGGTG+AGG | - | chr4_4:9187563-9187582 | None:intergenic | 55.0% | |
| ACTGCTGCCTCCAATCCCAT+TGG | - | chr4_4:9187720-9187739 | None:intergenic | 55.0% | |
| AATGGGATTGGAGGCAGCAG+TGG | + | chr4_4:9187719-9187738 | Msa0668270:CDS | 55.0% | |
| TTCGGACCGGCTACTAGTAC+TGG | - | chr4_4:9187780-9187799 | None:intergenic | 55.0% | |
| CAGATTGTAACTTGGGGGGG+GGG | + | chr4_4:9190382-9190401 | Msa0668270:intron | 55.0% | |
| AGATTGTAACTTGGGGGGGG+GGG | + | chr4_4:9190383-9190402 | Msa0668270:intron | 55.0% | |
| GTGGTTCCCCTCTAAACCTC+AGG | + | chr4_4:9190472-9190491 | Msa0668270:intron | 55.0% | |
| AAGGGAGTGGATGTACCCTG+AGG | - | chr4_4:9190491-9190510 | None:intergenic | 55.0% | |
| ! | TTTGTGGTGGCTGGTTGTGG+TGG | - | chr4_4:9191522-9191541 | None:intergenic | 55.0% |
| ! | TCGGGCTAGGTGACTGCCTA+GGG | - | chr4_4:9186297-9186316 | None:intergenic | 60.0% |
| TCACCTAGCCCGACGACTAG+TGG | + | chr4_4:9186304-9186323 | Msa0668270:CDS | 60.0% | |
| CTTCCACTAGTCGTCGGGCT+AGG | - | chr4_4:9186310-9186329 | None:intergenic | 60.0% | |
| GCCCGACGACTAGTGGAAGT+CGG | + | chr4_4:9186311-9186330 | Msa0668270:CDS | 60.0% | |
| ACCGACATCTTCACCGTCCC+CGG | + | chr4_4:9186338-9186357 | Msa0668270:CDS | 60.0% | |
| ACCGGGGACGGTGAAGATGT+CGG | - | chr4_4:9186342-9186361 | None:intergenic | 60.0% | |
| ! | CAGGTTGAAGTCACCGGGGA+CGG | - | chr4_4:9186354-9186373 | None:intergenic | 60.0% |
| TCAGGTGGTCGAGCAAGGTC+AGG | - | chr4_4:9186373-9186392 | None:intergenic | 60.0% | |
| CTTGCTCGACCACCTGATCG+CGG | + | chr4_4:9186376-9186395 | Msa0668270:CDS | 60.0% | |
| TCAGCTTCGGTTCCGCGATC+AGG | - | chr4_4:9186391-9186410 | None:intergenic | 60.0% | |
| ! | CGCTCGCAAAGCGCCTTAAG+AGG | + | chr4_4:9188135-9188154 | Msa0668270:CDS | 60.0% |
| TTGCCGAGACAGGGGACTCA+TGG | + | chr4_4:9188297-9188316 | Msa0668270:CDS | 60.0% | |
| GATTGTAACTTGGGGGGGGG+GGG | + | chr4_4:9190384-9190403 | Msa0668270:intron | 60.0% | |
| ATTGTAACTTGGGGGGGGGG+GGG | + | chr4_4:9190385-9190404 | Msa0668270:intron | 60.0% | |
| TTCGCGAGGTGTGAAGGGAG+TGG | - | chr4_4:9190504-9190523 | None:intergenic | 60.0% | |
| ACTCCCTTCACACCTCGCGA+AGG | + | chr4_4:9190503-9190522 | Msa0668270:intron | 60.0% | |
| ! | GTCGGGCTAGGTGACTGCCT+AGG | - | chr4_4:9186298-9186317 | None:intergenic | 65.0% |
| CGCGATCAGGTGGTCGAGCA+AGG | - | chr4_4:9186378-9186397 | None:intergenic | 65.0% | |
| GCTTCGGTTCCGCGATCAGG+TGG | - | chr4_4:9186388-9186407 | None:intergenic | 65.0% | |
| GGCAGCAGTGGAAGCAGCTG+CGG | + | chr4_4:9187731-9187750 | Msa0668270:CDS | 65.0% | |
| TTGTAACTTGGGGGGGGGGG+GGG | + | chr4_4:9190386-9190405 | Msa0668270:intron | 65.0% | |
| GGGGGGGGGGGGTTTGAATT+AGG | + | chr4_4:9190397-9190416 | Msa0668270:intron | 65.0% | |
| ! | TGGTGGCTGGTTGTGGTGGC+TGG | - | chr4_4:9191518-9191537 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 9186085 | 9192235 | 9186085 | ID=Msa0668270;Name=Msa0668270 |
| chr4_4 | mRNA | 9186085 | 9192235 | 9186085 | ID=Msa0668270-mRNA-1;Parent=Msa0668270;Name=Msa0668270-mRNA-1;_AED=0.09;_eAED=0.09;_QI=73|0.83|0.85|1|1|1|7|226|651 |
| chr4_4 | exon | 9186085 | 9186688 | 9186085 | ID=Msa0668270-mRNA-1:exon:2925;Parent=Msa0668270-mRNA-1 |
| chr4_4 | exon | 9187446 | 9187609 | 9187446 | ID=Msa0668270-mRNA-1:exon:2926;Parent=Msa0668270-mRNA-1 |
| chr4_4 | exon | 9187707 | 9188357 | 9187707 | ID=Msa0668270-mRNA-1:exon:2927;Parent=Msa0668270-mRNA-1 |
| chr4_4 | exon | 9188621 | 9188738 | 9188621 | ID=Msa0668270-mRNA-1:exon:2928;Parent=Msa0668270-mRNA-1 |
| chr4_4 | exon | 9188902 | 9189090 | 9188902 | ID=Msa0668270-mRNA-1:exon:2929;Parent=Msa0668270-mRNA-1 |
| chr4_4 | exon | 9189262 | 9189393 | 9189262 | ID=Msa0668270-mRNA-1:exon:2930;Parent=Msa0668270-mRNA-1 |
| chr4_4 | exon | 9191839 | 9192235 | 9191839 | ID=Msa0668270-mRNA-1:exon:2931;Parent=Msa0668270-mRNA-1 |
| chr4_4 | five_prime_UTR | 9186085 | 9186157 | 9186085 | ID=Msa0668270-mRNA-1:five_prime_utr;Parent=Msa0668270-mRNA-1 |
| chr4_4 | CDS | 9186158 | 9186688 | 9186158 | ID=Msa0668270-mRNA-1:cds;Parent=Msa0668270-mRNA-1 |
| chr4_4 | CDS | 9187446 | 9187609 | 9187446 | ID=Msa0668270-mRNA-1:cds;Parent=Msa0668270-mRNA-1 |
| chr4_4 | CDS | 9187707 | 9188357 | 9187707 | ID=Msa0668270-mRNA-1:cds;Parent=Msa0668270-mRNA-1 |
| chr4_4 | CDS | 9188621 | 9188738 | 9188621 | ID=Msa0668270-mRNA-1:cds;Parent=Msa0668270-mRNA-1 |
| chr4_4 | CDS | 9188902 | 9189090 | 9188902 | ID=Msa0668270-mRNA-1:cds;Parent=Msa0668270-mRNA-1 |
| chr4_4 | CDS | 9189262 | 9189393 | 9189262 | ID=Msa0668270-mRNA-1:cds;Parent=Msa0668270-mRNA-1 |
| chr4_4 | CDS | 9191839 | 9192009 | 9191839 | ID=Msa0668270-mRNA-1:cds;Parent=Msa0668270-mRNA-1 |
| chr4_4 | three_prime_UTR | 9192010 | 9192235 | 9192010 | ID=Msa0668270-mRNA-1:three_prime_utr;Parent=Msa0668270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
