AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0669380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0669380 MtrunA17_Chr4g0008551 92.857 350 10 2 1 335 1 350 0.0 652
Msa0669380 MtrunA17_Chr3g0133601 65.741 108 22 2 36 128 35 142 3.58e-41 143
Msa0669380 MtrunA17_Chr4g0053431 64.078 103 23 1 36 124 3 105 3.64e-39 139
Msa0669380 MtrunA17_Chr5g0401731 61.165 103 26 1 36 124 13 115 1.61e-36 134
Msa0669380 MtrunA17_Chr5g0437321 60.748 107 28 1 29 121 10 116 8.00e-36 131
Msa0669380 MtrunA17_Chr6g0454921 57.282 103 30 1 36 124 13 115 2.22e-34 125
Msa0669380 MtrunA17_Chr3g0125801 53.465 101 33 2 38 124 16 116 1.49e-29 114
Msa0669380 MtrunA17_Chr1g0157731 42.208 154 71 4 37 174 90 241 2.12e-29 119
Msa0669380 MtrunA17_Chr5g0417621 48.214 112 44 1 27 124 123 234 2.34e-29 117
Msa0669380 MtrunA17_Chr7g0238631 51.961 102 35 1 37 124 112 213 2.40e-29 118
Msa0669380 MtrunA17_Chr4g0058991 52.941 102 34 1 37 124 208 309 5.10e-29 116
Msa0669380 MtrunA17_Chr4g0042501 44.355 124 55 1 15 124 82 205 5.94e-29 115
Msa0669380 MtrunA17_Chr7g0228531 52.475 101 35 1 37 124 219 319 8.30e-29 115
Msa0669380 MtrunA17_Chr7g0254261 51.485 101 35 2 38 124 89 189 8.67e-29 114
Msa0669380 MtrunA17_Chr5g0429661 49.515 103 38 1 37 125 121 223 7.09e-28 111
Msa0669380 MtrunA17_Chr6g0480581 48.000 100 38 1 38 123 4 103 1.29e-27 108
Msa0669380 MtrunA17_Chr3g0139671 46.078 102 41 1 37 124 84 185 3.37e-27 112
Msa0669380 MtrunA17_Chr7g0228481 52.525 99 34 1 37 122 219 317 5.53e-27 110
Msa0669380 MtrunA17_Chr6g0460671 45.370 108 45 1 31 124 92 199 9.74e-27 108
Msa0669380 MtrunA17_Chr3g0117511 50.000 102 37 1 37 124 182 283 1.50e-26 109
Msa0669380 MtrunA17_Chr5g0417821 50.962 104 36 2 38 126 9 112 1.00e-25 104
Msa0669380 MtrunA17_Chr1g0167661 38.415 164 82 4 38 182 14 177 6.18e-25 101
Msa0669380 MtrunA17_Chr3g0103281 38.028 142 69 3 38 160 14 155 2.26e-24 101
Msa0669380 MtrunA17_Chr6g0460661 41.441 111 51 1 28 124 6 116 2.59e-24 97.1
Msa0669380 MtrunA17_Chr3g0099131 45.217 115 43 3 38 132 43 157 8.28e-24 102
Msa0669380 MtrunA17_Chr2g0281071 43.802 121 48 4 30 131 8 127 4.05e-23 98.2
Msa0669380 MtrunA17_Chr4g0022911 34.591 159 65 4 38 180 15 150 6.15e-23 96.7
Msa0669380 MtrunA17_Chr4g0048511 42.623 122 50 4 30 132 8 128 6.29e-23 97.8
Msa0669380 MtrunA17_Chr1g0193801 38.961 154 73 4 38 172 14 165 7.27e-23 98.2
Msa0669380 MtrunA17_Chr8g0334881 46.078 102 39 2 38 123 12 113 8.61e-23 96.7
Msa0669380 MtrunA17_Chr4g0013361 43.636 110 46 2 30 123 4 113 9.20e-23 96.3
Msa0669380 MtrunA17_Chr5g0397841 46.875 96 37 1 37 118 109 204 1.34e-22 98.2
Msa0669380 MtrunA17_Chr4g0030881 41.026 117 45 3 38 131 9 124 1.75e-22 94.7
Msa0669380 MtrunA17_Chr5g0395281 44.737 114 42 4 38 131 14 126 4.59e-22 94.7
Msa0669380 MtrunA17_Chr2g0323411 43.363 113 45 3 38 131 14 126 6.87e-22 94.4
Msa0669380 MtrunA17_Chr4g0039971 44.538 119 44 5 33 131 11 127 8.82e-22 94.7
Msa0669380 MtrunA17_Chr2g0327821 37.762 143 65 4 38 157 8 149 1.06e-21 92.0
Msa0669380 MtrunA17_Chr1g0152011 37.324 142 72 4 38 163 14 154 1.12e-21 94.0
Msa0669380 MtrunA17_Chr5g0410961 45.098 102 41 2 38 124 14 115 1.15e-21 94.0
Msa0669380 MtrunA17_Chr3g0088461 45.690 116 47 3 25 124 10 125 1.39e-21 94.0
Msa0669380 MtrunA17_Chr2g0309911 43.103 116 48 4 28 126 2 116 2.64e-21 92.4
Msa0669380 MtrunA17_Chr3g0115821 45.714 105 40 3 38 126 14 117 2.75e-21 93.2
Msa0669380 MtrunA17_Chr5g0400821 37.838 148 73 4 38 169 14 158 4.76e-21 91.7
Msa0669380 MtrunA17_Chr1g0180391 45.794 107 41 3 34 124 17 122 5.52e-21 90.1
Msa0669380 MtrunA17_Chr1g0193371 38.667 150 59 5 38 159 14 158 6.39e-21 92.4
Msa0669380 MtrunA17_Chr4g0060721 45.098 102 41 2 38 124 15 116 7.44e-21 91.7
Msa0669380 MtrunA17_Chr4g0022901 41.667 108 46 3 38 129 15 121 8.72e-21 90.5
Msa0669380 MtrunA17_Chr1g0154031 47.115 104 38 3 38 125 78 180 9.40e-21 92.4
Msa0669380 MtrunA17_Chr2g0322521 46.296 108 41 3 38 129 31 137 1.02e-20 92.0
Msa0669380 MtrunA17_Chr1g0151941 40.833 120 48 4 38 134 14 133 1.08e-20 89.7
Msa0669380 MtrunA17_Chr4g0058631 44.660 103 40 3 38 124 14 115 1.20e-20 91.3
Msa0669380 MtrunA17_Chr7g0217221 37.762 143 58 5 38 161 14 144 1.32e-20 89.7
Msa0669380 MtrunA17_Chr8g0385321 42.735 117 48 3 38 135 14 130 1.38e-20 90.5
Msa0669380 MtrunA17_Chr7g0270891 43.860 114 43 4 38 131 14 126 1.39e-20 91.3
Msa0669380 MtrunA17_Chr8g0346561 44.118 102 42 2 38 124 14 115 1.58e-20 90.1
Msa0669380 MtrunA17_Chr6g0470971 45.283 106 39 4 38 126 16 119 2.13e-20 89.4
Msa0669380 MtrunA17_Chr8g0342541 45.283 106 40 4 36 124 11 115 2.18e-20 90.5
Msa0669380 MtrunA17_Chr4g0022931 34.591 159 62 6 38 180 15 147 2.46e-20 89.0
Msa0669380 MtrunA17_Chr1g0211161 44.660 103 40 3 38 124 15 116 2.61e-20 88.2
Msa0669380 MtrunA17_Chr3g0117091 40.602 133 61 4 38 153 14 145 2.73e-20 90.1
Msa0669380 MtrunA17_Chr4g0068061 47.059 102 39 2 38 124 14 115 2.88e-20 90.1
Msa0669380 MtrunA17_Chr2g0328771 45.098 102 41 2 38 124 22 123 2.89e-20 89.7
Msa0669380 MtrunA17_Chr3g0092401 43.137 102 43 2 38 124 15 116 2.90e-20 89.7
Msa0669380 MtrunA17_Chr4g0042671 42.478 113 46 3 38 131 14 126 3.32e-20 90.5
Msa0669380 MtrunA17_Chr7g0228401 50.000 88 30 1 49 122 290 377 3.36e-20 91.3
Msa0669380 MtrunA17_Chr8g0354661 43.925 107 45 2 38 129 39 145 4.05e-20 91.3
Msa0669380 MtrunA17_Chr7g0275911 43.137 102 43 2 38 124 14 115 4.18e-20 88.2
Msa0669380 MtrunA17_Chr5g0441131 36.076 158 79 5 38 177 11 164 5.24e-20 86.3
Msa0669380 MtrunA17_Chr8g0342521 46.226 106 39 4 36 124 11 115 6.11e-20 89.4
Msa0669380 MtrunA17_Chr8g0349261 43.396 106 42 4 38 126 15 119 6.28e-20 88.6
Msa0669380 MtrunA17_Chr2g0323351 34.932 146 75 4 38 164 14 158 7.65e-20 87.4
Msa0669380 MtrunA17_Chr1g0203411 43.137 102 43 2 38 124 14 115 7.98e-20 88.2
Msa0669380 MtrunA17_Chr6g0453471 42.478 113 46 3 38 131 14 126 8.46e-20 89.0
Msa0669380 MtrunA17_Chr4g0032401 42.857 112 48 3 29 124 9 120 9.66e-20 88.6
Msa0669380 MtrunA17_Chr3g0080861 43.519 108 44 3 38 129 39 145 9.82e-20 90.1
Msa0669380 MtrunA17_Chr7g0254411 44.660 103 40 3 38 124 14 115 9.84e-20 88.6
Msa0669380 MtrunA17_Chr7g0274581 37.405 131 61 3 38 153 14 138 1.07e-19 85.9
Msa0669380 MtrunA17_Chr1g0167691 43.137 102 43 2 38 124 14 115 1.37e-19 86.7
Msa0669380 MtrunA17_Chr1g0186061 40.678 118 46 4 30 124 7 123 1.81e-19 86.3
Msa0669380 MtrunA17_Chr3g0135311 43.396 106 44 3 38 127 14 119 1.90e-19 87.8
Msa0669380 MtrunA17_Chr7g0217741 38.849 139 64 4 38 155 14 152 2.02e-19 87.4
Msa0669380 MtrunA17_Chr1g0168661 41.525 118 50 4 26 125 9 125 2.60e-19 85.9
Msa0669380 MtrunA17_Chr1g0203441 42.105 114 49 3 38 135 15 127 2.73e-19 86.3
Msa0669380 MtrunA17_Chr1g0177901 47.191 89 33 1 48 122 4 92 2.90e-19 84.7
Msa0669380 MtrunA17_Chr5g0435101 41.379 116 52 3 38 137 13 128 3.05e-19 84.7
Msa0669380 MtrunA17_Chr6g0452271 35.000 140 72 3 38 158 14 153 3.58e-19 87.0
Msa0669380 MtrunA17_Chr4g0028311 44.660 103 41 3 38 124 14 116 4.11e-19 86.7
Msa0669380 MtrunA17_Chr2g0330041 43.396 106 42 4 36 124 11 115 4.62e-19 87.4
Msa0669380 MtrunA17_Chr1g0187761 42.718 103 42 3 38 124 14 115 4.72e-19 85.1
Msa0669380 MtrunA17_Chr6g0453211 43.299 97 40 2 38 119 14 110 4.99e-19 86.3
Msa0669380 MtrunA17_Chr8g0342481 42.056 107 44 4 38 127 14 119 6.02e-19 87.0
Msa0669380 MtrunA17_Chr5g0397231 47.000 100 37 3 36 119 11 110 7.09e-19 86.3
Msa0669380 MtrunA17_Chr4g0055981 42.308 104 43 3 38 125 57 159 7.27e-19 84.3
Msa0669380 MtrunA17_Chr2g0327351 47.959 98 35 3 38 119 14 111 9.17e-19 85.5
Msa0669380 MtrunA17_Chr7g0228231 41.584 101 44 2 38 123 16 116 9.21e-19 83.6
Msa0669380 MtrunA17_Chr2g0311221 46.078 102 37 4 35 119 12 112 1.09e-18 85.5
Msa0669380 MtrunA17_Chr7g0233061 40.385 104 46 2 33 122 175 276 1.14e-18 85.9
Msa0669380 MtrunA17_Chr8g0387421 42.857 105 44 3 36 124 11 115 1.20e-18 85.1
Msa0669380 MtrunA17_Chr1g0194951 45.098 102 41 2 38 124 14 115 1.22e-18 85.9
Msa0669380 MtrunA17_Chr6g0450101 41.284 109 48 3 38 131 16 123 1.57e-18 82.8
Msa0669380 MtrunA17_Chr8g0343831 42.157 102 44 2 38 124 10 111 1.88e-18 83.6
Msa0669380 MtrunA17_Chr7g0261281 42.157 102 44 2 38 124 14 115 2.17e-18 84.0
Msa0669380 MtrunA17_Chr1g0209661 36.893 103 50 2 38 125 29 131 2.41e-18 84.3
Msa0669380 MtrunA17_Chr6g0487491 42.857 119 43 5 35 128 10 128 2.60e-18 83.2
Msa0669380 MtrunA17_Chr7g0264641 41.748 103 44 3 38 124 14 116 2.65e-18 83.6
Msa0669380 MtrunA17_Chr1g0192411 42.609 115 50 3 31 129 6 120 3.85e-18 84.7
Msa0669380 MtrunA17_Chr4g0022891 43.564 101 40 3 38 122 14 113 5.21e-18 82.0
Msa0669380 MtrunA17_Chr4g0037141 41.593 113 47 3 38 131 14 126 5.63e-18 82.8
Msa0669380 MtrunA17_Chr1g0194301 42.308 104 43 3 38 125 35 137 6.66e-18 82.4
Msa0669380 MtrunA17_Chr7g0228891 31.765 170 92 6 38 185 14 181 7.73e-18 82.0
Msa0669380 MtrunA17_Chr3g0110351 41.739 115 44 5 38 131 14 126 7.74e-18 82.8
Msa0669380 MtrunA17_Chr3g0121241 40.385 104 47 2 38 126 44 147 9.44e-18 82.4
Msa0669380 MtrunA17_Chr4g0044421 39.831 118 53 4 36 136 12 128 9.55e-18 80.1
Msa0669380 MtrunA17_Chr4g0022881 42.991 107 43 4 33 123 10 114 1.18e-17 80.9
Msa0669380 MtrunA17_Chr7g0220341 36.090 133 67 5 20 135 10 141 1.79e-17 81.3
Msa0669380 MtrunA17_Chr4g0057031 38.261 115 50 4 38 132 14 127 1.89e-17 80.9
Msa0669380 MtrunA17_Chr4g0054391 45.361 97 37 3 38 118 14 110 2.16e-17 81.3
Msa0669380 MtrunA17_Chr5g0434571 40.870 115 45 5 38 131 50 162 2.54e-17 82.0
Msa0669380 MtrunA17_Chr7g0271241 37.241 145 70 4 38 162 14 157 2.65e-17 82.0
Msa0669380 MtrunA17_Chr4g0070611 38.393 112 53 3 38 134 14 124 2.93e-17 81.3
Msa0669380 MtrunA17_Chr8g0362231 32.836 134 73 3 27 144 9 141 3.36e-17 82.0
Msa0669380 MtrunA17_Chr4g0072751 45.918 98 37 3 38 119 14 111 3.55e-17 81.3
Msa0669380 MtrunA17_Chr5g0440781 41.176 102 44 3 38 123 14 115 4.76e-17 78.2
Msa0669380 MtrunA17_Chr4g0070641 38.393 112 53 3 38 134 14 124 5.43e-17 77.4
Msa0669380 MtrunA17_Chr1g0194291 40.367 109 49 3 26 119 12 119 6.22e-17 79.3
Msa0669380 MtrunA17_Chr3g0131121 40.196 102 46 2 38 124 14 115 7.42e-17 79.7
Msa0669380 MtrunA17_Chr5g0416341 35.354 99 50 1 41 125 29 127 1.22e-16 80.5
Msa0669380 MtrunA17_Chr5g0440761 41.176 102 44 3 38 123 14 115 1.60e-16 78.2
Msa0669380 MtrunA17_Chr5g0441141 41.176 102 44 3 38 123 14 115 1.75e-16 78.2
Msa0669380 MtrunA17_Chr5g0434841 40.385 104 47 3 38 126 22 125 3.26e-16 78.2
Msa0669380 MtrunA17_Chr5g0434831 37.500 104 50 2 38 126 9 112 4.22e-16 75.5
Msa0669380 MtrunA17_Chr5g0434911 37.500 104 50 3 38 126 23 126 6.52e-16 76.6
Msa0669380 MtrunA17_Chr7g0247131 49.351 77 23 2 64 124 5 81 7.23e-16 76.6
Msa0669380 MtrunA17_Chr5g0434931 36.538 104 51 3 38 126 37 140 1.12e-15 76.3
Msa0669380 MtrunA17_Chr7g0269831 41.525 118 49 3 38 135 14 131 1.45e-15 76.6
Msa0669380 MtrunA17_Chr7g0240821 37.931 116 52 5 41 139 6 118 1.55e-15 74.7
Msa0669380 MtrunA17_Chr7g0228991 36.538 104 51 3 38 126 31 134 7.76e-15 73.6
Msa0669380 MtrunA17_Chr2g0293911 36.893 103 50 2 38 125 26 128 1.14e-14 73.9
Msa0669380 MtrunA17_Chr7g0233151 65.116 43 15 0 82 124 9 51 2.53e-14 70.1
Msa0669380 MtrunA17_Chr8g0360111 35.238 105 53 2 32 121 21 125 4.36e-14 71.2
Msa0669380 MtrunA17_Chr4g0068921 36.634 101 49 2 38 123 26 126 5.73e-14 69.7
Msa0669380 MtrunA17_Chr3g0099141 43.373 83 32 2 38 105 42 124 1.08e-13 67.8
Msa0669380 MtrunA17_Chr3g0093811 43.038 79 27 2 71 131 18 96 3.10e-13 68.9
Msa0669380 MtrunA17_Chr7g0238651 35.294 102 49 2 33 117 2 103 1.54e-12 67.8
Msa0669380 MtrunA17_Chr3g0104491 56.818 44 19 0 82 125 25 68 1.97e-12 66.6
Msa0669380 MtrunA17_Chr3g0104501 51.852 54 26 0 32 85 127 180 3.68e-11 61.6
Msa0669380 MtrunA17_Chr5g0421201 59.524 42 17 0 82 123 18 59 3.95e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0669380 AT3G09230.1 47.734 331 144 7 25 333 43 366 5.34e-88 270
Msa0669380 AT3G55730.1 41.892 370 164 10 1 324 1 365 2.42e-78 245
Msa0669380 AT2G39880.1 37.798 336 148 11 12 319 24 326 1.51e-54 182
Msa0669380 AT4G37260.1 43.814 194 78 4 36 205 11 197 6.01e-37 135
Msa0669380 AT5G67300.1 59.091 110 30 2 36 131 4 112 1.33e-36 134
Msa0669380 AT3G50060.1 60.185 108 29 1 36 129 4 111 3.81e-36 132
Msa0669380 AT2G23290.1 56.098 123 39 2 36 144 11 132 5.61e-36 132
Msa0669380 AT1G17950.1 46.875 128 46 3 38 144 5 131 5.54e-31 117
Msa0669380 AT5G17800.1 46.457 127 52 2 14 124 67 193 8.55e-30 116
Msa0669380 AT1G69560.1 47.273 110 44 1 29 124 98 207 1.76e-29 115
Msa0669380 AT1G69560.2 47.273 110 44 1 29 124 114 223 2.12e-29 115
Msa0669380 AT4G33450.1 50.495 101 36 1 38 124 19 119 1.85e-28 111
Msa0669380 AT1G73410.1 51.485 101 35 2 38 124 6 106 5.13e-28 109
Msa0669380 AT1G26780.1 49.505 101 37 1 38 124 98 198 5.13e-28 110
Msa0669380 AT5G58850.1 48.598 107 41 1 32 124 99 205 6.52e-28 113
Msa0669380 AT1G73410.2 51.485 101 35 2 38 124 6 106 7.39e-28 108
Msa0669380 AT1G26780.2 49.505 101 37 1 38 124 98 198 8.25e-28 111
Msa0669380 AT4G18770.1 47.706 109 43 1 30 124 209 317 2.04e-27 111
Msa0669380 AT5G02320.3 40.816 147 62 2 37 169 66 201 2.22e-27 112
Msa0669380 AT3G09370.2 49.020 102 38 1 37 124 134 235 2.40e-27 112
Msa0669380 AT3G09370.1 49.020 102 38 1 37 124 129 230 2.41e-27 112
Msa0669380 AT5G02320.1 40.816 147 62 2 37 169 126 261 2.54e-27 112
Msa0669380 AT5G02320.2 40.816 147 62 2 37 169 126 261 2.54e-27 112
Msa0669380 AT3G09370.3 49.020 102 38 1 37 124 142 243 3.00e-27 112
Msa0669380 AT3G27785.1 49.524 105 39 1 34 124 185 289 5.85e-27 110
Msa0669380 AT5G11510.3 43.137 102 44 1 37 124 80 181 1.54e-26 110
Msa0669380 AT5G11510.1 43.137 102 44 1 37 124 80 181 1.54e-26 110
Msa0669380 AT5G11510.4 43.137 102 44 1 37 124 80 181 1.54e-26 110
Msa0669380 AT5G11510.5 43.137 102 44 1 37 124 80 181 1.99e-26 110
Msa0669380 AT5G11510.2 43.137 102 44 1 37 124 80 181 2.22e-26 110
Msa0669380 AT5G11050.1 46.602 103 41 1 37 125 104 206 8.55e-26 107
Msa0669380 AT4G32730.5 45.098 102 42 1 37 124 86 187 8.85e-26 108
Msa0669380 AT4G32730.4 45.098 102 42 1 37 124 86 187 8.85e-26 108
Msa0669380 AT4G32730.3 45.098 102 42 1 37 124 86 187 8.85e-26 108
Msa0669380 AT4G32730.2 45.098 102 42 1 37 124 86 187 8.85e-26 108
Msa0669380 AT4G32730.1 45.098 102 42 1 37 124 86 187 1.19e-25 108
Msa0669380 AT5G40360.1 47.000 100 39 1 38 123 158 257 1.41e-25 105
Msa0669380 AT3G29020.1 46.535 101 40 1 38 124 65 165 4.12e-24 99.0
Msa0669380 AT3G29020.2 46.535 101 40 1 38 124 67 167 4.45e-24 100
Msa0669380 AT4G05100.1 44.628 121 47 4 30 131 8 127 9.52e-24 100
Msa0669380 AT5G59780.3 44.231 104 41 3 38 125 10 112 1.73e-23 97.4
Msa0669380 AT3G46130.1 45.192 104 40 3 38 125 11 113 2.53e-23 97.4
Msa0669380 AT2G32460.1 44.275 131 51 5 15 129 2 126 5.95e-23 99.8
Msa0669380 AT3G53200.1 48.544 103 36 3 38 124 11 112 6.91e-23 95.9
Msa0669380 AT4G28110.1 44.248 113 44 3 38 131 14 126 6.92e-23 96.7
Msa0669380 AT3G11440.2 45.794 107 43 2 38 129 43 149 1.03e-22 99.0
Msa0669380 AT3G11440.3 45.794 107 43 2 38 129 43 149 2.55e-22 98.2
Msa0669380 AT3G11440.4 45.794 107 43 2 38 129 43 149 2.55e-22 98.2
Msa0669380 AT3G11440.1 45.794 107 43 2 38 129 43 149 2.55e-22 98.2
Msa0669380 AT2G32460.2 46.296 108 41 3 38 129 8 114 2.84e-22 97.4
Msa0669380 AT1G18570.1 45.133 113 43 3 38 131 15 127 3.84e-22 95.9
Msa0669380 AT4G26930.1 42.373 118 53 2 27 129 10 127 4.47e-22 96.3
Msa0669380 AT5G06100.1 45.794 107 43 2 38 129 34 140 7.15e-22 96.3
Msa0669380 AT3G30210.1 39.259 135 64 4 38 155 29 162 7.27e-22 94.0
Msa0669380 AT5G14750.1 37.241 145 73 4 28 157 9 150 1.24e-21 91.7
Msa0669380 AT5G06100.5 45.794 107 43 2 38 129 34 140 1.60e-21 95.5
Msa0669380 AT5G06100.2 45.794 107 43 2 38 129 34 140 1.60e-21 95.5
Msa0669380 AT5G06100.3 45.794 107 43 2 38 129 34 140 1.60e-21 95.5
Msa0669380 AT5G06100.4 45.794 107 43 2 38 129 34 140 1.60e-21 95.5
Msa0669380 AT5G56110.1 43.363 113 45 3 38 131 14 126 1.68e-21 93.6
Msa0669380 AT3G48920.1 42.478 113 49 3 38 135 20 131 2.02e-21 92.4
Msa0669380 AT4G21440.1 43.363 113 45 3 38 131 14 126 2.27e-21 93.6
Msa0669380 AT2G25230.1 43.564 101 41 3 38 123 26 125 2.72e-21 91.3
Msa0669380 AT4G01680.3 44.737 114 42 4 38 131 14 126 3.15e-21 91.3
Msa0669380 AT3G12720.1 45.631 103 39 3 38 124 24 125 3.16e-21 92.8
Msa0669380 AT1G79180.1 47.170 106 40 3 35 124 12 117 3.91e-21 92.0
Msa0669380 AT3G60460.1 44.118 102 41 2 38 123 13 114 4.41e-21 92.0
Msa0669380 AT2G47190.1 46.154 104 39 3 38 125 22 124 4.93e-21 91.7
Msa0669380 AT3G61250.1 44.660 103 40 3 38 124 14 115 5.30e-21 92.0
Msa0669380 AT4G01680.1 44.737 114 42 4 38 131 14 126 5.72e-21 92.4
Msa0669380 AT5G62470.1 36.000 150 77 3 38 169 14 162 6.43e-21 92.4
Msa0669380 AT5G57620.1 44.340 106 43 3 38 127 14 119 7.94e-21 92.0
Msa0669380 AT4G00540.2 45.192 104 40 2 38 124 103 206 8.14e-21 92.8
Msa0669380 AT5G15310.4 39.286 140 63 4 38 155 14 153 8.49e-21 90.1
Msa0669380 AT5G26660.1 39.474 152 63 6 38 166 14 159 8.81e-21 92.0
Msa0669380 AT5G15310.1 40.152 132 57 4 38 147 14 145 1.03e-20 91.7
Msa0669380 AT5G15310.2 39.286 140 63 4 38 155 14 153 1.16e-20 91.3
Msa0669380 AT5G07690.1 43.363 113 45 3 38 131 14 126 1.41e-20 91.3
Msa0669380 AT3G23250.1 44.118 102 42 2 38 124 14 115 1.44e-20 90.5
Msa0669380 AT4G17785.2 44.737 114 44 3 38 132 15 128 1.53e-20 91.3
Msa0669380 AT5G55020.1 45.545 101 40 2 38 123 28 128 1.71e-20 92.4
Msa0669380 AT4G17785.1 44.737 114 44 3 38 132 15 128 1.79e-20 91.3
Msa0669380 AT4G00540.1 45.192 104 40 2 38 124 101 204 2.01e-20 92.0
Msa0669380 AT5G65230.1 44.762 105 41 3 38 126 14 117 2.12e-20 90.5
Msa0669380 AT1G74650.1 44.231 104 43 2 38 126 14 117 2.17e-20 90.9
Msa0669380 AT3G01140.2 43.089 123 49 4 38 139 14 136 2.21e-20 90.9
Msa0669380 AT3G08500.1 43.802 121 53 2 19 124 13 133 2.45e-20 90.9
Msa0669380 AT5G60890.1 44.248 113 44 3 38 131 14 126 2.52e-20 90.1
Msa0669380 AT3G01140.1 43.089 123 49 4 38 139 57 179 3.26e-20 90.9
Msa0669380 AT5G07700.1 43.363 113 45 3 38 131 14 126 3.39e-20 90.1
Msa0669380 AT5G07700.2 43.363 113 45 3 38 131 14 126 3.39e-20 90.1
Msa0669380 AT1G74430.1 43.103 116 47 3 38 134 14 129 3.84e-20 89.0
Msa0669380 AT3G02940.2 41.593 113 47 3 38 131 14 126 4.15e-20 89.7
Msa0669380 AT3G02940.1 41.593 113 47 3 38 131 14 126 4.88e-20 89.7
Msa0669380 AT3G02940.3 41.593 113 47 3 38 131 14 126 4.88e-20 89.7
Msa0669380 AT1G56160.1 43.925 107 42 4 35 124 12 117 4.96e-20 89.0
Msa0669380 AT5G23000.1 46.729 107 40 4 35 124 10 116 7.59e-20 89.0
Msa0669380 AT5G10280.1 41.905 105 44 3 38 126 14 117 1.08e-19 89.0
Msa0669380 AT1G57560.1 42.982 114 44 4 38 131 14 126 1.08e-19 88.6
Msa0669380 AT1G57560.2 42.982 114 44 4 38 131 14 126 1.13e-19 87.8
Msa0669380 AT4G25560.1 42.857 105 43 3 38 126 12 115 1.14e-19 87.8
Msa0669380 AT5G39700.1 34.677 124 66 2 15 123 32 155 1.14e-19 85.9
Msa0669380 AT5G12870.1 45.098 102 41 2 38 124 20 121 1.17e-19 87.8
Msa0669380 AT1G34670.1 38.129 139 67 3 38 157 14 152 1.38e-19 89.0
Msa0669380 AT1G63910.1 44.762 105 42 3 36 124 11 115 1.92e-19 88.6
Msa0669380 AT5G54230.1 41.593 113 47 3 38 131 14 126 1.94e-19 87.8
Msa0669380 AT3G28910.1 42.453 106 46 2 34 124 10 115 2.18e-19 87.8
Msa0669380 AT5G62470.2 36.424 151 76 4 38 169 14 163 2.28e-19 88.2
Msa0669380 AT1G08810.1 37.063 143 68 4 38 159 14 155 2.67e-19 86.7
Msa0669380 AT5G61420.2 43.363 113 45 3 38 131 14 126 2.68e-19 88.2
Msa0669380 AT1G06180.1 47.115 104 36 4 38 124 14 115 2.92e-19 85.9
Msa0669380 AT4G01680.2 40.476 126 42 4 38 131 14 138 2.93e-19 87.8
Msa0669380 AT4G37780.1 45.631 103 40 3 38 124 14 116 3.19e-19 87.0
Msa0669380 AT5G52600.1 43.243 111 45 4 30 124 7 115 3.49e-19 84.7
Msa0669380 AT3G01530.1 43.396 106 43 3 34 123 23 127 3.65e-19 84.7
Msa0669380 AT2G31180.1 42.157 102 44 2 38 124 14 115 3.68e-19 85.9
Msa0669380 AT5G16770.4 41.593 113 47 3 38 131 14 126 3.78e-19 87.0
Msa0669380 AT5G16770.3 41.593 113 47 3 38 131 14 126 3.78e-19 87.0
Msa0669380 AT3G47600.1 43.137 102 43 2 38 124 14 115 4.06e-19 87.0
Msa0669380 AT3G27920.1 40.000 105 48 2 38 127 16 120 4.27e-19 85.1
Msa0669380 AT1G25340.1 38.053 113 53 3 29 125 11 122 4.28e-19 86.3
Msa0669380 AT5G16770.1 41.593 113 47 3 38 131 14 126 4.53e-19 87.0
Msa0669380 AT5G16770.2 41.593 113 47 3 38 131 14 126 4.53e-19 87.0
Msa0669380 AT1G09540.1 44.737 114 42 4 38 131 14 126 5.41e-19 87.0
Msa0669380 AT1G74080.1 42.478 113 46 3 38 131 14 126 5.43e-19 86.7
Msa0669380 AT2G26960.1 29.646 226 115 6 35 232 19 228 6.22e-19 87.4
Msa0669380 AT5G40330.1 38.596 114 54 3 30 127 6 119 6.48e-19 84.3
Msa0669380 AT3G13890.2 42.857 105 44 3 36 124 11 115 6.66e-19 86.7
Msa0669380 AT2G02820.3 38.384 99 47 1 41 125 33 131 6.79e-19 86.7
Msa0669380 AT1G22640.1 42.157 102 44 2 38 124 14 115 7.08e-19 85.1
Msa0669380 AT1G25340.2 36.937 111 52 2 29 125 11 117 7.32e-19 85.5
Msa0669380 AT2G02820.1 38.384 99 47 1 41 125 33 131 8.03e-19 87.4
Msa0669380 AT2G02820.2 38.384 99 47 1 41 125 33 131 8.03e-19 87.4
Msa0669380 AT4G22680.1 38.710 124 55 4 38 141 14 136 8.44e-19 85.1
Msa0669380 AT1G25340.3 36.607 112 53 2 28 125 10 117 9.93e-19 85.5
Msa0669380 AT5G49330.1 44.118 102 42 2 38 124 14 115 1.35e-18 85.9
Msa0669380 AT1G18710.1 41.228 114 48 3 38 132 14 127 1.35e-18 84.7
Msa0669380 AT3G13540.1 42.157 102 44 2 38 124 25 126 1.54e-18 84.0
Msa0669380 AT3G24310.1 43.689 103 41 3 38 124 20 121 1.79e-18 84.3
Msa0669380 AT5G35550.1 42.157 102 44 2 38 124 16 117 1.81e-18 84.0
Msa0669380 AT3G28470.1 42.478 113 46 3 38 131 14 126 1.99e-18 85.1
Msa0669380 AT4G38620.1 41.593 113 47 3 38 131 14 126 2.10e-18 84.3
Msa0669380 AT5G52260.1 39.831 118 54 3 25 126 1 117 2.51e-18 84.0
Msa0669380 AT3G49690.1 43.810 105 43 3 38 126 14 118 2.65e-18 84.3
Msa0669380 AT5G65790.1 44.660 103 41 3 38 124 14 116 2.79e-18 85.1
Msa0669380 AT3G27810.1 42.574 101 43 2 38 123 22 122 3.35e-18 82.8
Msa0669380 AT1G35515.1 41.176 102 45 2 38 124 14 115 4.06e-18 82.0
Msa0669380 AT3G13890.1 41.228 114 42 4 36 124 11 124 4.10e-18 84.7
Msa0669380 AT2G16720.1 41.176 102 45 2 38 124 14 115 4.65e-18 83.2
Msa0669380 AT5G40350.1 41.346 104 46 2 38 126 19 122 6.69e-18 81.6
Msa0669380 AT1G66230.1 41.739 115 44 5 38 131 14 126 8.73e-18 82.4
Msa0669380 AT2G26950.1 39.640 111 43 4 37 127 17 123 9.21e-18 84.0
Msa0669380 AT1G16490.1 44.340 106 43 3 35 124 12 117 9.77e-18 82.4
Msa0669380 AT5G16600.1 43.478 115 42 5 38 131 14 126 1.18e-17 82.8
Msa0669380 AT4G34990.1 42.157 102 44 2 38 124 14 115 1.27e-17 82.0
Msa0669380 AT1G14350.2 36.364 99 49 1 41 125 28 126 1.29e-17 83.6
Msa0669380 AT1G14350.1 36.364 99 49 1 41 125 28 126 1.29e-17 83.6
Msa0669380 AT4G13480.1 41.748 103 43 3 38 124 8 109 1.30e-17 81.6
Msa0669380 AT4G12350.1 39.806 103 45 3 38 124 14 115 1.40e-17 82.0
Msa0669380 AT4G09460.1 43.137 102 43 2 38 124 14 115 1.82e-17 80.9
Msa0669380 AT1G68320.1 37.500 104 48 3 38 125 21 123 2.89e-17 81.3
Msa0669380 AT5G40430.1 31.618 136 71 3 9 123 18 152 2.93e-17 80.5
Msa0669380 AT2G47460.1 44.118 102 42 2 38 124 14 115 2.99e-17 82.0
Msa0669380 AT3G12820.1 40.952 105 45 3 38 126 16 119 4.39e-17 79.7
Msa0669380 AT2G36890.2 42.593 108 46 3 38 129 55 162 7.83e-17 80.5
Msa0669380 AT1G79180.2 36.691 139 39 4 35 124 12 150 7.85e-17 80.5
Msa0669380 AT2G36890.1 42.593 108 46 3 38 129 14 121 8.54e-17 80.1
Msa0669380 AT3G62610.1 44.118 102 42 2 38 124 14 115 1.25e-16 80.1
Msa0669380 AT1G48000.1 39.604 101 46 2 38 123 34 134 4.21e-16 77.0
Msa0669380 AT3G53200.2 52.941 68 18 1 71 124 12 79 6.09e-16 75.9
Msa0669380 AT5G14340.1 39.423 104 44 4 38 124 26 127 8.06e-16 77.0
Msa0669380 AT1G66370.1 30.909 165 80 5 29 166 2 159 2.08e-15 75.1
Msa0669380 AT5G26660.2 40.171 117 44 4 71 166 17 128 2.68e-15 75.9
Msa0669380 AT5G14750.3 36.634 101 48 2 71 157 18 116 7.65e-15 72.0
Msa0669380 AT5G62320.1 33.125 160 66 7 38 170 15 160 7.72e-15 73.6
Msa0669380 AT5G35550.2 38.261 115 55 3 71 169 53 167 2.89e-14 72.0
Msa0669380 AT5G49620.1 38.614 101 47 2 38 123 28 128 2.92e-14 72.8
Msa0669380 AT3G06490.1 38.235 102 46 3 38 123 21 121 3.82e-14 72.8
Msa0669380 AT5G59780.2 45.588 68 23 1 71 124 23 90 9.20e-14 70.1
Msa0669380 AT3G46130.3 44.928 69 24 1 71 125 13 81 1.59e-13 69.3
Msa0669380 AT1G56650.1 36.364 110 55 2 30 124 2 111 1.74e-13 69.7
Msa0669380 AT3G46130.4 44.928 69 24 1 71 125 23 91 1.99e-13 69.3
Msa0669380 AT1G66380.1 36.364 110 55 3 30 124 2 111 3.22e-13 66.6
Msa0669380 AT1G66390.1 36.364 110 55 2 30 124 2 111 9.71e-13 67.8
Msa0669380 AT3G12820.2 45.714 70 24 1 71 126 2 71 1.88e-12 65.9
Msa0669380 AT3G27810.2 46.269 67 22 1 71 123 7 73 5.54e-12 63.9
Msa0669380 AT5G40350.2 44.286 70 25 1 71 126 8 77 1.52e-11 62.8
Msa0669380 AT3G47600.2 44.118 68 24 1 71 124 42 109 1.93e-11 64.7
Msa0669380 AT1G18960.1 33.333 117 60 4 32 131 4 119 2.49e-11 64.3
Msa0669380 AT5G49620.2 33.333 117 49 3 38 125 28 144 4.48e-11 63.5
Msa0669380 AT5G14750.4 36.842 76 46 1 82 157 16 89 5.33e-11 60.5
Msa0669380 AT5G14750.2 36.842 76 46 1 82 157 16 89 5.33e-11 60.5

Find 107 sgRNAs with CRISPR-Local

Find 721 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTTCCGCATCTGATTT+TGG 0.155153 4_4:-11057113 None:intergenic
TTGATTGCTCGTGGAATTTC+TGG 0.157255 4_4:+11049528 Msa0669380:CDS
TGTAATAATGAATATGAATT+CGG 0.286689 4_4:+11057520 Msa0669380:three_prime_UTR
CACGTGCTACTGGCTTAAAA+AGG 0.288338 4_4:-11056995 None:intergenic
CTGAGAATGGCGTCTTCTTC+AGG 0.289480 4_4:-11049468 None:intergenic
ACTCTGAGGCGTCGAGGAAT+TGG 0.291399 4_4:+11056744 Msa0669380:CDS
TACGAATTTGTTTGCTACTA+AGG 0.311407 4_4:-11057481 None:intergenic
GGAGTTGGTGGTTGTTGTTC+TGG 0.312707 4_4:-11049348 None:intergenic
TGGTCCCAACAAAGAGCTTT+TGG 0.322656 4_4:-11057219 None:intergenic
CTCTGAGGCGTCGAGGAATT+GGG 0.329462 4_4:+11056745 Msa0669380:CDS
AGAATTCCAGTGGTTCTTAA+TGG 0.336432 4_4:-11056721 None:intergenic
GTCAGTTCGGTGCTAGAAAC+TGG 0.340339 4_4:+11049502 Msa0669380:CDS
AGGAAGAGATGTTAGTTCTA+TGG 0.342770 4_4:+11056896 Msa0669380:CDS
CCTTGCATTGGAACAGGTCT+TGG 0.356777 4_4:-11057074 None:intergenic
ATGGCATTATCTGTTCTTCC+TGG 0.361429 4_4:-11056702 None:intergenic
TTCAATTATACCATGAAGTC+AGG 0.372730 4_4:+11056961 Msa0669380:CDS
TGGCTGCCCATTTGTTTCCA+TGG 0.388447 4_4:-11056665 None:intergenic
AGTTTCTTCAGATGATGCTT+TGG 0.397065 4_4:-11056835 None:intergenic
CAACTCCAAAAGCTCTTTGT+TGG 0.403606 4_4:+11057214 Msa0669380:CDS
CTGGCAGGGTTAATATCTAA+TGG 0.414064 4_4:+11057375 Msa0669380:CDS
ATGCAATCCATGGAAACAAA+TGG 0.418432 4_4:+11056658 Msa0669380:CDS
GTAATAATGAATATGAATTC+GGG 0.420141 4_4:+11057521 Msa0669380:three_prime_UTR
AACTCCAAAAGCTCTTTGTT+GGG 0.427043 4_4:+11057215 Msa0669380:CDS
AATGCGTATAACGCTTTCAA+TGG 0.428676 4_4:+11057029 Msa0669380:CDS
GGAAGTCGTGCCGGCTCCGA+TGG 0.433047 4_4:+11049559 Msa0669380:CDS
CATCCATGACCACACTGATT+AGG 0.440165 4_4:-11057173 None:intergenic
CGTGGAATTTCTGGAAGATC+GGG 0.442466 4_4:+11049537 Msa0669380:CDS
TCAAAACTTGTGAAAGATTG+AGG 0.443078 4_4:-11057263 None:intergenic
TGCTTGGCTTAAAAGTGGAT+TGG 0.445450 4_4:+11057319 Msa0669380:CDS
CAGACATTAGTAACCTTGCT+TGG 0.447221 4_4:+11057303 Msa0669380:CDS
ATAGGTCCTTGCATTGGAAC+AGG 0.451041 4_4:-11057080 None:intergenic
TCGGTGGATCCCTGACTTCA+TGG 0.451649 4_4:-11056971 None:intergenic
CATGGATGCTGCTCATCTCT+TGG 0.452941 4_4:+11057188 Msa0669380:CDS
AGTCGTCTTGTTAGTCAGTT+CGG 0.460173 4_4:+11049489 Msa0669380:CDS
AACCTTGCTTGGCTTAAAAG+TGG 0.461055 4_4:+11057314 Msa0669380:CDS
GACGAAGGTTTAGCCGCATT+AGG 0.461626 4_4:+11049396 Msa0669380:CDS
TCGTGCACCGCCGTGGGAGT+TGG 0.471026 4_4:-11049363 None:intergenic
TCTGAATATTCAATGAAGTC+TGG 0.473030 4_4:-11057239 None:intergenic
GAACAGCAGCGTCAAAATGA+TGG 0.474378 4_4:+11057343 Msa0669380:CDS
TTGGAGCTGATGTTGAAGGC+TGG 0.475354 4_4:-11057055 None:intergenic
AATGGATCATGATTACATAC+TGG 0.480485 4_4:+11057393 Msa0669380:exon
TCGTGGAATTTCTGGAAGAT+CGG 0.489928 4_4:+11049536 Msa0669380:CDS
GGTCTTGGAGCTGATGTTGA+AGG 0.490656 4_4:-11057059 None:intergenic
TGGAGCTGATGTTGAAGGCT+GGG 0.493210 4_4:-11057054 None:intergenic
AAAGCACTTACACGTGCTAC+TGG 0.500174 4_4:-11057005 None:intergenic
TGCAATCCATGGAAACAAAT+GGG 0.500748 4_4:+11056659 Msa0669380:CDS
TTAGTAGCAAACAAATTCGT+AGG 0.508010 4_4:+11057483 Msa0669380:three_prime_UTR
TGCACCGCCGTGGGAGTTGG+TGG 0.508022 4_4:-11049360 None:intergenic
ACGGCGGTGCACGACGGAAG+CGG 0.521070 4_4:+11049372 Msa0669380:CDS
ACTAACAAGACGACTGAGAA+TGG 0.521928 4_4:-11049481 None:intergenic
ACAAATGGGCAGCCATTGCT+AGG 0.523613 4_4:+11056673 Msa0669380:CDS
GTGCCTAATCAGTGTGGTCA+TGG 0.526372 4_4:+11057170 Msa0669380:CDS
AACTGGAGTTTGATTGCTCG+TGG 0.529814 4_4:+11049519 Msa0669380:CDS
GAAGATCGGGGAAGTCGTGC+CGG 0.535316 4_4:+11049550 Msa0669380:CDS
TGACATTATGCACATCCATC+CGG 0.536843 4_4:-11057457 None:intergenic
GCATTAGGCGAAGGCGGCGA+AGG 0.538199 4_4:+11049411 Msa0669380:CDS
AGGGCAAATCTTAATGGGAC+CGG 0.544032 4_4:+11057438 Msa0669380:three_prime_UTR
GCCATTGCTAGGCTTCTGCC+AGG 0.547052 4_4:+11056684 Msa0669380:CDS
TCTGAGGCGTCGAGGAATTG+GGG 0.551690 4_4:+11056746 Msa0669380:CDS
GCATAATTATAAGACTCGAT+TGG 0.552833 4_4:+11057585 Msa0669380:three_prime_UTR
TGTAAAATAGGTCCTTGCAT+TGG 0.557114 4_4:-11057086 None:intergenic
ATAATGCCATTAAGAACCAC+TGG 0.559681 4_4:+11056715 Msa0669380:CDS
GCTGATTACACCATCGGAGC+CGG 0.561787 4_4:-11049569 None:intergenic
GGTTTAGCCGCATTAGGCGA+AGG 0.563573 4_4:+11049402 Msa0669380:CDS
TAGTAGCAAACAAATTCGTA+GGG 0.563850 4_4:+11057484 Msa0669380:three_prime_UTR
CTTCCGTCGTGCACCGCCGT+GGG 0.564944 4_4:-11049369 None:intergenic
CACACTGATTAGGCACTGAC+CGG 0.565218 4_4:-11057163 None:intergenic
GTTGCTGCTCATGCAATCCA+TGG 0.567764 4_4:+11056648 Msa0669380:CDS
AACAGCAGCGTCAAAATGAT+GGG 0.573995 4_4:+11057344 Msa0669380:CDS
CATGAGCAGCAACTATGATC+CGG 0.575593 4_4:-11056638 None:intergenic
GCTTCCGTCGTGCACCGCCG+TGG 0.576123 4_4:-11049370 None:intergenic
TCGAGTCTTATAATTATGCA+TGG 0.577751 4_4:-11057581 None:intergenic
TGATGGGTGATACTGCTGGC+AGG 0.579980 4_4:+11057360 Msa0669380:CDS
ACTAACATCTCTTCCTTCTG+AGG 0.583130 4_4:-11056889 None:intergenic
CCAAGACCTGTTCCAATGCA+AGG 0.588737 4_4:+11057074 Msa0669380:CDS
AAGTTAGAATCTAGTAACAT+GGG 0.589229 4_4:+11056789 Msa0669380:CDS
TCATGATTACATACTGGCCA+TGG 0.590262 4_4:+11057399 Msa0669380:three_prime_UTR
CTGAGGCGTCGAGGAATTGG+GGG 0.591911 4_4:+11056747 Msa0669380:CDS
ACAACAACCACCAACTCCCA+CGG 0.595464 4_4:+11049353 Msa0669380:CDS
TAAGTTAGAATCTAGTAACA+TGG 0.598010 4_4:+11056788 Msa0669380:CDS
AATTCTTTGAAATCCTCAGA+AGG 0.603835 4_4:+11056876 Msa0669380:CDS
GATCAAGCTGATTACACCAT+CGG 0.607608 4_4:-11049575 None:intergenic
AGTAGCGGTAGCAAAGTGAA+AGG 0.608608 4_4:+11049435 Msa0669380:CDS
TCCTGGCAGAAGCCTAGCAA+TGG 0.610263 4_4:-11056685 None:intergenic
CAAATCTTAATGGGACCGGA+TGG 0.610291 4_4:+11057442 Msa0669380:three_prime_UTR
ACATTCACCAAAATCAGATG+CGG 0.614421 4_4:+11057106 Msa0669380:CDS
TCTGAAGAAACTCTATCATG+TGG 0.617207 4_4:+11056846 Msa0669380:CDS
TTCGCCGCCTTCGCCTAATG+CGG 0.619488 4_4:-11049409 None:intergenic
GTAGCAAAGTGAAAGGACCT+TGG 0.631627 4_4:+11049442 Msa0669380:CDS
CACGACGGAAGCGGTGACGA+AGG 0.634186 4_4:+11049381 Msa0669380:CDS
TTAACAGAACTATTGTCGAC+CGG 0.637825 4_4:+11057144 Msa0669380:CDS
GAAGGCGGCGAAGGAAGTAG+CGG 0.640817 4_4:+11049420 Msa0669380:CDS
AGTTAGAATCTAGTAACATG+GGG 0.642008 4_4:+11056790 Msa0669380:CDS
TCAATTATACCATGAAGTCA+GGG 0.645491 4_4:+11056962 Msa0669380:CDS
GCCTCAGAGTAGAATTCCAG+TGG 0.656534 4_4:-11056731 None:intergenic
ACTCCCACGGCGGTGCACGA+CGG 0.659187 4_4:+11049366 Msa0669380:CDS
TTAGCCGCATTAGGCGAAGG+CGG 0.661776 4_4:+11049405 Msa0669380:CDS
AAAATGATGGGTGATACTGC+TGG 0.663087 4_4:+11057356 Msa0669380:CDS
GATGGGTGATACTGCTGGCA+GGG 0.665213 4_4:+11057361 Msa0669380:CDS
GCGTCTTCTTCAGGAGACCA+AGG 0.675143 4_4:-11049459 None:intergenic
AATTCTACTCTGAGGCGTCG+AGG 0.676063 4_4:+11056738 Msa0669380:CDS
GTTAGAATCTAGTAACATGG+GGG 0.690664 4_4:+11056791 Msa0669380:CDS
TTAGAATCTAGTAACATGGG+GGG 0.693286 4_4:+11056792 Msa0669380:CDS
ACCACTGGAATTCTACTCTG+AGG 0.701771 4_4:+11056730 Msa0669380:CDS
GTGGAATTTCTGGAAGATCG+GGG 0.703083 4_4:+11049538 Msa0669380:CDS
CGGTCAGTGCCTAATCAGTG+TGG 0.713190 4_4:+11057164 Msa0669380:CDS
ACAACCACCAACTCCCACGG+CGG 0.735465 4_4:+11049356 Msa0669380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCGTTAAAAAAAAAATAATT+AGG + chr4_4:11050021-11050040 Msa0669380:intron 10.0%
!! CGTTAAAAAAAAAATAATTA+GGG + chr4_4:11050022-11050041 Msa0669380:intron 10.0%
!! GAAACATAAAAAATATATAT+AGG + chr4_4:11050326-11050345 Msa0669380:intron 10.0%
!!! AATAACAATTGAAAATTTTA+AGG - chr4_4:11051464-11051483 None:intergenic 10.0%
!! GATTAATTAATGAAAAAATA+AGG - chr4_4:11052949-11052968 None:intergenic 10.0%
!! AAATAATAAGATATAATAGA+TGG - chr4_4:11056563-11056582 None:intergenic 10.0%
!! ATAGACAAAAAAAAAATCTT+AGG + chr4_4:11050424-11050443 Msa0669380:intron 15.0%
!! AAAAAAAAAATCTTAGGAAA+GGG + chr4_4:11050430-11050449 Msa0669380:intron 15.0%
!!! CGACATTTTTTATATAAAAA+AGG - chr4_4:11050572-11050591 None:intergenic 15.0%
!!! TTTTCACCATTATTAAAAAT+GGG - chr4_4:11051396-11051415 None:intergenic 15.0%
!!! ATTTTCACCATTATTAAAAA+TGG - chr4_4:11051397-11051416 None:intergenic 15.0%
!! TTATCATATAAAACAATGTT+AGG - chr4_4:11051499-11051518 None:intergenic 15.0%
!!! TAAATCTAAGAATTTTTTCT+TGG - chr4_4:11051681-11051700 None:intergenic 15.0%
!!! AACTAATATATTCTTTGTTT+TGG + chr4_4:11053283-11053302 Msa0669380:intron 15.0%
!!! ACTAATATATTCTTTGTTTT+GGG + chr4_4:11053284-11053303 Msa0669380:intron 15.0%
!! TCAAATGAAATTATGTTAAA+CGG - chr4_4:11054672-11054691 None:intergenic 15.0%
!!! AAAATCTAAGAATTTTATCT+TGG - chr4_4:11056132-11056151 None:intergenic 15.0%
!!! TTTTTTTTTTTGTATTACCA+TGG - chr4_4:11057419-11057438 None:intergenic 15.0%
!! ATGGTAATACAAAAAAAAAA+AGG + chr4_4:11057418-11057437 Msa0669380:three_prime_UTR 15.0%
!! TGGTAATACAAAAAAAAAAA+GGG + chr4_4:11057419-11057438 Msa0669380:three_prime_UTR 15.0%
!! TGTAATAATGAATATGAATT+CGG + chr4_4:11057520-11057539 Msa0669380:three_prime_UTR 15.0%
!! ATTGATTAAGTTAAAAGACT+AGG + chr4_4:11049874-11049893 Msa0669380:intron 20.0%
!! AAACAATAAGTATTTGACAA+AGG + chr4_4:11050060-11050079 Msa0669380:intron 20.0%
!! AACAATAAGTATTTGACAAA+GGG + chr4_4:11050061-11050080 Msa0669380:intron 20.0%
!! CAAAAAAAAAATCTTAGGAA+AGG + chr4_4:11050429-11050448 Msa0669380:intron 20.0%
!! AAATTGATAAAGTAACATCT+AGG - chr4_4:11050856-11050875 None:intergenic 20.0%
!! TCTAAGAATCAATTGTTAAA+AGG - chr4_4:11051527-11051546 None:intergenic 20.0%
!!! AATTCATTTAATTTCGTGAT+GGG - chr4_4:11051626-11051645 None:intergenic 20.0%
!!! ATTCAGATTTATTAGTTTTG+GGG - chr4_4:11051845-11051864 None:intergenic 20.0%
!!! CATTCAGATTTATTAGTTTT+GGG - chr4_4:11051846-11051865 None:intergenic 20.0%
!!! ATATTTGTTAGTTTTGGATT+GGG - chr4_4:11051961-11051980 None:intergenic 20.0%
!! ACAATATTATATTATGCTGA+TGG - chr4_4:11052521-11052540 None:intergenic 20.0%
!! ATATTGTATATAGTCATTGA+TGG + chr4_4:11052534-11052553 Msa0669380:intron 20.0%
!!! CTAAGAAAATAAGTGTTTTT+TGG - chr4_4:11053514-11053533 None:intergenic 20.0%
!!! CAAAAAACACTTATTTTCTT+AGG + chr4_4:11053512-11053531 Msa0669380:intron 20.0%
!!! TTTTAATTCAAGTTTCTATC+AGG - chr4_4:11053725-11053744 None:intergenic 20.0%
!! TTATTGAATATGAACATGAT+TGG - chr4_4:11054275-11054294 None:intergenic 20.0%
!!! TTTTGATCTTTTGATTAGAT+TGG - chr4_4:11054511-11054530 None:intergenic 20.0%
!! AACATTTACAATTACTATGT+GGG - chr4_4:11055024-11055043 None:intergenic 20.0%
!! AAACATTTACAATTACTATG+TGG - chr4_4:11055025-11055044 None:intergenic 20.0%
!! AAACCAAACTAAAATTAAGT+CGG + chr4_4:11055048-11055067 Msa0669380:intron 20.0%
!! TCTAGATCTATAAAACTAAT+GGG - chr4_4:11055080-11055099 None:intergenic 20.0%
!! TTCTAGATCTATAAAACTAA+TGG - chr4_4:11055081-11055100 None:intergenic 20.0%
!!! TAATTCAAGTTTCTATCAAT+TGG - chr4_4:11055803-11055822 None:intergenic 20.0%
!!! AAAATTCTTAGATTTTAGAG+AGG + chr4_4:11056136-11056155 Msa0669380:intron 20.0%
!!! AAAATGGTATTATTTTGTGT+TGG + chr4_4:11056261-11056280 Msa0669380:intron 20.0%
!! CATTAAGCAATTATGAAAAA+AGG - chr4_4:11056423-11056442 None:intergenic 20.0%
!!! AATATAATGTTTTTCAGATG+AGG + chr4_4:11056611-11056630 Msa0669380:intron 20.0%
!! GTAATAATGAATATGAATTC+GGG + chr4_4:11057521-11057540 Msa0669380:three_prime_UTR 20.0%
! TTGAGATTAGAATGAAGTAT+TGG + chr4_4:11049918-11049937 Msa0669380:intron 25.0%
!!! ATTAGAATGAAGTATTGGAA+TGG + chr4_4:11049923-11049942 Msa0669380:intron 25.0%
!! TATGTGTGTTATCAAGTTTT+AGG + chr4_4:11049990-11050009 Msa0669380:intron 25.0%
!! ATGTGTGTTATCAAGTTTTA+GGG + chr4_4:11049991-11050010 Msa0669380:intron 25.0%
!! TGACAAAGGGTTTAAAATTA+TGG + chr4_4:11050074-11050093 Msa0669380:intron 25.0%
!! AGGATAAACCTTTAAGTTAT+TGG + chr4_4:11050201-11050220 Msa0669380:intron 25.0%
!! AACCTTTAAGTTATTGGAAA+AGG + chr4_4:11050207-11050226 Msa0669380:intron 25.0%
!! AACCTTTTCCAATAACTTAA+AGG - chr4_4:11050212-11050231 None:intergenic 25.0%
! ATAAAGAAATCGTAATAGTG+TGG + chr4_4:11050527-11050546 Msa0669380:intron 25.0%
! ATAAAAAATGTCGCGATTAT+TGG + chr4_4:11050579-11050598 Msa0669380:intron 25.0%
!!! ATTATTGGTGGGTAATTTTA+TGG + chr4_4:11050594-11050613 Msa0669380:intron 25.0%
! CAAATATTCTATAGCAAATC+AGG - chr4_4:11050786-11050805 None:intergenic 25.0%
!!! CTGATTTGCTATAGAATATT+TGG + chr4_4:11050784-11050803 Msa0669380:intron 25.0%
! ATGTAAACCTATATAGTTAC+GGG - chr4_4:11051084-11051103 None:intergenic 25.0%
! GATGTAAACCTATATAGTTA+CGG - chr4_4:11051085-11051104 None:intergenic 25.0%
! AGATACACAATATCTAAACA+AGG - chr4_4:11051305-11051324 None:intergenic 25.0%
! TTATTAAAAATGGGATTTCC+TGG - chr4_4:11051387-11051406 None:intergenic 25.0%
!!! GGAAATCCCATTTTTAATAA+TGG + chr4_4:11051387-11051406 Msa0669380:intron 25.0%
!! AAATAAACATCTTTTGATGC+TGG + chr4_4:11051413-11051432 Msa0669380:intron 25.0%
!! CAATTCATTTAATTTCGTGA+TGG - chr4_4:11051627-11051646 None:intergenic 25.0%
!!! GCATTCAGATTTATTAGTTT+TGG - chr4_4:11051847-11051866 None:intergenic 25.0%
!!! CTACTGATTTCATACTATTT+AGG + chr4_4:11051875-11051894 Msa0669380:intron 25.0%
!!! CATATTTGTTAGTTTTGGAT+TGG - chr4_4:11051962-11051981 None:intergenic 25.0%
!!! GCATTCATATTTGTTAGTTT+TGG - chr4_4:11051967-11051986 None:intergenic 25.0%
!! CAAAATACAAGAAAAGTGTA+AGG - chr4_4:11052337-11052356 None:intergenic 25.0%
!! CTTACACTTTTCTTGTATTT+TGG + chr4_4:11052335-11052354 Msa0669380:intron 25.0%
! CTATTTGTTCATTCTATTTC+TGG - chr4_4:11052382-11052401 None:intergenic 25.0%
!! AATGGTGATTTTCTATAAGT+TGG - chr4_4:11052435-11052454 None:intergenic 25.0%
!!! AGATGTTGATTCATTTTAGA+AGG + chr4_4:11052818-11052837 Msa0669380:intron 25.0%
! AATTTCAACTACACCATTAA+AGG + chr4_4:11053011-11053030 Msa0669380:intron 25.0%
! TGAGAATATCTCCTATATTT+AGG + chr4_4:11053099-11053118 Msa0669380:intron 25.0%
! AAAAGACATCTCCTAAATAT+AGG - chr4_4:11053113-11053132 None:intergenic 25.0%
!! ATATTTAGGAGATGTCTTTT+CGG + chr4_4:11053113-11053132 Msa0669380:intron 25.0%
! GGAGTAATATAAAGATGAAA+AGG + chr4_4:11053305-11053324 Msa0669380:intron 25.0%
!! GTAAATACTTCAAAGGATTT+TGG - chr4_4:11053357-11053376 None:intergenic 25.0%
! GATTAACAATCACTAGTATT+AGG - chr4_4:11053540-11053559 None:intergenic 25.0%
! ATATATAATCAATCATGCTG+AGG + chr4_4:11053564-11053583 Msa0669380:intron 25.0%
! TGGATACTATCTCTAATTTA+GGG - chr4_4:11053665-11053684 None:intergenic 25.0%
! TTGGATACTATCTCTAATTT+AGG - chr4_4:11053666-11053685 None:intergenic 25.0%
!! TATATGATAGAGGAAAGTTT+TGG - chr4_4:11054161-11054180 None:intergenic 25.0%
! AATGATATCCATGTATTCAT+GGG - chr4_4:11054346-11054365 None:intergenic 25.0%
! AAATGATATCCATGTATTCA+TGG - chr4_4:11054347-11054366 None:intergenic 25.0%
! CTAAGATGTATATGAAACAT+GGG - chr4_4:11054455-11054474 None:intergenic 25.0%
! ACTAAGATGTATATGAAACA+TGG - chr4_4:11054456-11054475 None:intergenic 25.0%
! GATATATTAATTGAGACTCT+GGG - chr4_4:11054489-11054508 None:intergenic 25.0%
! TAACATAATTTCATTTGACC+TGG + chr4_4:11054674-11054693 Msa0669380:intron 25.0%
!! TTCAGTTATAATGGAGTTAT+GGG - chr4_4:11054724-11054743 None:intergenic 25.0%
!! TTTCAGTTATAATGGAGTTA+TGG - chr4_4:11054725-11054744 None:intergenic 25.0%
! ATAACTCCATTATAACTGAA+AGG + chr4_4:11054724-11054743 Msa0669380:intron 25.0%
! TCTACATAAAGGAAAACATT+GGG - chr4_4:11054764-11054783 None:intergenic 25.0%
! TGGAGAAAATATATGAAGAT+AGG + chr4_4:11054800-11054819 Msa0669380:intron 25.0%
! AACCAAATATGAGTTCAAAA+CGG + chr4_4:11054842-11054861 Msa0669380:intron 25.0%
!!! CTTTTTTGTCTTTTACCAAA+AGG + chr4_4:11054958-11054977 Msa0669380:intron 25.0%
! AACCAAACTAAAATTAAGTC+GGG + chr4_4:11055049-11055068 Msa0669380:intron 25.0%
!! TTTGTTATAAGAGTTTGTGA+AGG - chr4_4:11055988-11056007 None:intergenic 25.0%
!! AATTTTATCTTGGATCTGAT+AGG - chr4_4:11056122-11056141 None:intergenic 25.0%
! AAGCAATTATGAAAAAAGGA+AGG - chr4_4:11056419-11056438 None:intergenic 25.0%
! TTTCACTTTCCTGAATATAT+AGG + chr4_4:11056580-11056599 Msa0669380:intron 25.0%
! TTTGTTTAGCCTATATATTC+AGG - chr4_4:11056592-11056611 None:intergenic 25.0%
! TAAGTTAGAATCTAGTAACA+TGG + chr4_4:11056788-11056807 Msa0669380:CDS 25.0%
! AAGTTAGAATCTAGTAACAT+GGG + chr4_4:11056789-11056808 Msa0669380:CDS 25.0%
! ATAAAAATGAAGACAAAGCA+AGG + chr4_4:11056931-11056950 Msa0669380:CDS 25.0%
!!! GATTTTGGTGAATGTAAAAT+AGG - chr4_4:11057101-11057120 None:intergenic 25.0%
! AAAAAAAGGGCAAATCTTAA+TGG + chr4_4:11057432-11057451 Msa0669380:three_prime_UTR 25.0%
! AAAAAAGGGCAAATCTTAAT+GGG + chr4_4:11057433-11057452 Msa0669380:three_prime_UTR 25.0%
! TAATTTAGAGTTTGGTTGTG+AGG + chr4_4:11049701-11049720 Msa0669380:intron 30.0%
!!! TTGGAAAAGGTTTTAAAGTG+TGG + chr4_4:11050220-11050239 Msa0669380:intron 30.0%
TGATGTTGTGACTACAAATT+TGG + chr4_4:11050652-11050671 Msa0669380:intron 30.0%
!!! GACTGCAATTTTTAAAACCT+TGG + chr4_4:11050680-11050699 Msa0669380:intron 30.0%
!!! TGGGACTTTTTAAAGCTTAA+TGG + chr4_4:11050717-11050736 Msa0669380:intron 30.0%
ATGAATTACTGTTGTCATTC+TGG + chr4_4:11050743-11050762 Msa0669380:intron 30.0%
!! AGAATATTTGGATTTGCTGT+AGG + chr4_4:11050796-11050815 Msa0669380:intron 30.0%
! TTACGCCAATAATGTTGATT+GGG + chr4_4:11050887-11050906 Msa0669380:intron 30.0%
!! ATTTTCACACCCTATTTTTC+CGG - chr4_4:11051022-11051041 None:intergenic 30.0%
! TGTGAAAATTGTCGTTTAAC+AGG + chr4_4:11051033-11051052 Msa0669380:intron 30.0%
! AAAATTGTCGTTTAACAGGA+GGG + chr4_4:11051037-11051056 Msa0669380:intron 30.0%
!! ACTTTTGACTCTACTAAGAT+GGG + chr4_4:11051166-11051185 Msa0669380:intron 30.0%
CATCAAGTATGAAATTCACA+AGG - chr4_4:11051241-11051260 None:intergenic 30.0%
AACAAGGTATGAAATTCACA+TGG - chr4_4:11051289-11051308 None:intergenic 30.0%
TGCAGCATAATAGGAATATA+TGG - chr4_4:11051585-11051604 None:intergenic 30.0%
ACACTTCAGTAATTATTGAC+TGG + chr4_4:11051737-11051756 Msa0669380:intron 30.0%
TATGAAATCAGTAGAAGATG+GGG - chr4_4:11051869-11051888 None:intergenic 30.0%
GTATGAAATCAGTAGAAGAT+GGG - chr4_4:11051870-11051889 None:intergenic 30.0%
AGTATGAAATCAGTAGAAGA+TGG - chr4_4:11051871-11051890 None:intergenic 30.0%
AGTATGAAATCAGTAGAAGA+TGG - chr4_4:11051871-11051890 None:intergenic 30.0%
AAACAAGATGGAACTTCAAT+GGG - chr4_4:11052115-11052134 None:intergenic 30.0%
AAAACAAGATGGAACTTCAA+TGG - chr4_4:11052116-11052135 None:intergenic 30.0%
AGAACTCTTGTAAAACAAGA+TGG - chr4_4:11052127-11052146 None:intergenic 30.0%
!!! AAGCATTAAGGTTGTTGTTT+TGG - chr4_4:11052240-11052259 None:intergenic 30.0%
!! ACACTTTTCTTGTATTTTGG+CGG + chr4_4:11052338-11052357 Msa0669380:intron 30.0%
TTATATTATGCTGATGGCAT+AGG - chr4_4:11052515-11052534 None:intergenic 30.0%
GTCAACTTGTAGCAAATAAT+GGG - chr4_4:11052562-11052581 None:intergenic 30.0%
AGTCAACTTGTAGCAAATAA+TGG - chr4_4:11052563-11052582 None:intergenic 30.0%
! TTGACATCAACTATGGTTTT+GGG - chr4_4:11052617-11052636 None:intergenic 30.0%
TCCGAATTGCTTAAATTTGA+GGG - chr4_4:11052786-11052805 None:intergenic 30.0%
ATCCGAATTGCTTAAATTTG+AGG - chr4_4:11052787-11052806 None:intergenic 30.0%
AAAAGGAATTCAGCAATTTC+TGG - chr4_4:11052971-11052990 None:intergenic 30.0%
AAGAATACTGATGCTGTAAA+AGG - chr4_4:11052988-11053007 None:intergenic 30.0%
AGGAGATATTCTCACTAAAT+AGG - chr4_4:11053093-11053112 None:intergenic 30.0%
TTTATTTGTATAGCTGTGCT+TGG + chr4_4:11053143-11053162 Msa0669380:intron 30.0%
! TTCCTACTTTCTTAGTTCTT+TGG + chr4_4:11053167-11053186 Msa0669380:intron 30.0%
! TCCTACTTTCTTAGTTCTTT+GGG + chr4_4:11053168-11053187 Msa0669380:intron 30.0%
!!! TATTCGGGATTGTTTTTAGA+CGG + chr4_4:11053240-11053259 Msa0669380:intron 30.0%
GATTTGGGTAAATACTTCAA+AGG - chr4_4:11053364-11053383 None:intergenic 30.0%
!! GTTTCTGGCATTTAGTTTAA+TGG + chr4_4:11053411-11053430 Msa0669380:intron 30.0%
!!! AGTGTTTTTTGGAAGTTGAA+GGG - chr4_4:11053503-11053522 None:intergenic 30.0%
!!! AAGTGTTTTTTGGAAGTTGA+AGG - chr4_4:11053504-11053523 None:intergenic 30.0%
! CTGTTAACTAAATTGACTCA+GGG - chr4_4:11053594-11053613 None:intergenic 30.0%
! ACTGTTAACTAAATTGACTC+AGG - chr4_4:11053595-11053614 None:intergenic 30.0%
TTTGTTACAAGAGTTTGTGA+AGG - chr4_4:11053907-11053926 None:intergenic 30.0%
AGTTAGTTAGAGGGAAAAAT+GGG - chr4_4:11053973-11053992 None:intergenic 30.0%
TAGTTAGTTAGAGGGAAAAA+TGG - chr4_4:11053974-11053993 None:intergenic 30.0%
ACTTGGAAAATGAGTAAGAA+TGG + chr4_4:11054085-11054104 Msa0669380:intron 30.0%
CTTATGTTGGTATATGATAG+AGG - chr4_4:11054171-11054190 None:intergenic 30.0%
!! GATTTGGTTCAAAAGCATTT+GGG - chr4_4:11054199-11054218 None:intergenic 30.0%
!! AGATTTGGTTCAAAAGCATT+TGG - chr4_4:11054200-11054219 None:intergenic 30.0%
!! TTGATTTGGTATATGACAGA+GGG - chr4_4:11054224-11054243 None:intergenic 30.0%
!! AATCTATGGTTTGCTTGATT+TGG - chr4_4:11054238-11054257 None:intergenic 30.0%
AGATATCCACTTTCAATCTA+TGG - chr4_4:11054252-11054271 None:intergenic 30.0%
! TTAAGACTATGTGTTAGCTT+TGG - chr4_4:11054370-11054389 None:intergenic 30.0%
GGATATATTAATTGAGACTC+TGG - chr4_4:11054490-11054509 None:intergenic 30.0%
GAAGTTTGTGTTTCAAATAG+AGG - chr4_4:11054598-11054617 None:intergenic 30.0%
! ATTTGAAACACAAACTTCAG+TGG + chr4_4:11054600-11054619 Msa0669380:intron 30.0%
! TCAGTTATAATGGAGTTATG+GGG - chr4_4:11054723-11054742 None:intergenic 30.0%
CTACATAAAGGAAAACATTG+GGG - chr4_4:11054763-11054782 None:intergenic 30.0%
CTCTACATAAAGGAAAACAT+TGG - chr4_4:11054765-11054784 None:intergenic 30.0%
! CAATGTTTTCCTTTATGTAG+AGG + chr4_4:11054763-11054782 Msa0669380:intron 30.0%
! ATATTTTCTCCAACTTCACT+TGG - chr4_4:11054792-11054811 None:intergenic 30.0%
ACCAAATATGAGTTCAAAAC+GGG + chr4_4:11054843-11054862 Msa0669380:intron 30.0%
TCTCAATATCTATTGACACT+GGG - chr4_4:11054924-11054943 None:intergenic 30.0%
ATCTCAATATCTATTGACAC+TGG - chr4_4:11054925-11054944 None:intergenic 30.0%
! TCTAGTAAATATGGTCCTTT+TGG - chr4_4:11054976-11054995 None:intergenic 30.0%
CTCCTTAACAAAATCGTAAT+CGG + chr4_4:11055169-11055188 Msa0669380:intron 30.0%
AACAGAGAAGAAGATGAAAT+TGG - chr4_4:11055540-11055559 None:intergenic 30.0%
AGTTAGTTAGAGGGAAAAAT+GGG - chr4_4:11053973-11053992 None:intergenic 30.0%
TAGTTAGTTAGAGGGAAAAA+TGG - chr4_4:11053974-11053993 None:intergenic 30.0%
AGAGAATCTAAGCTTGTAAT+AGG + chr4_4:11056230-11056249 Msa0669380:intron 30.0%
GTAATAGGCTTGTACAAAAA+TGG + chr4_4:11056245-11056264 Msa0669380:intron 30.0%
AGTTAGAATCTAGTAACATG+GGG + chr4_4:11056790-11056809 Msa0669380:CDS 30.0%
!! AATTCTTTGAAATCCTCAGA+AGG + chr4_4:11056876-11056895 Msa0669380:CDS 30.0%
TTCAATTATACCATGAAGTC+AGG + chr4_4:11056961-11056980 Msa0669380:CDS 30.0%
TCAATTATACCATGAAGTCA+GGG + chr4_4:11056962-11056981 Msa0669380:CDS 30.0%
TCTGAATATTCAATGAAGTC+TGG - chr4_4:11057242-11057261 None:intergenic 30.0%
TCAAAACTTGTGAAAGATTG+AGG - chr4_4:11057266-11057285 None:intergenic 30.0%
!!! ATCTTTCACAAGTTTTGAGT+TGG + chr4_4:11057268-11057287 Msa0669380:CDS 30.0%
AATGGATCATGATTACATAC+TGG + chr4_4:11057393-11057412 Msa0669380:exon 30.0%
! TACGAATTTGTTTGCTACTA+AGG - chr4_4:11057484-11057503 None:intergenic 30.0%
TTAGTAGCAAACAAATTCGT+AGG + chr4_4:11057483-11057502 Msa0669380:three_prime_UTR 30.0%
TAGTAGCAAACAAATTCGTA+GGG + chr4_4:11057484-11057503 Msa0669380:three_prime_UTR 30.0%
! TCGAGTCTTATAATTATGCA+TGG - chr4_4:11057584-11057603 None:intergenic 30.0%
GCATAATTATAAGACTCGAT+TGG + chr4_4:11057585-11057604 Msa0669380:three_prime_UTR 30.0%
! AAGGGTTTTCGTTTAACAGA+AGG - chr4_4:11049600-11049619 None:intergenic 35.0%
! TTTTCCGTTGTTAAACGTTC+CGG + chr4_4:11049660-11049679 Msa0669380:intron 35.0%
TAAACCGGAACGTTTAACAA+CGG - chr4_4:11049667-11049686 None:intergenic 35.0%
! GGCTCTTGTAATTTAGAGTT+TGG + chr4_4:11049693-11049712 Msa0669380:intron 35.0%
! GTTTGAGAATTGTTCGAGTT+CGG + chr4_4:11049737-11049756 Msa0669380:intron 35.0%
! TTTGAGAATTGTTCGAGTTC+GGG + chr4_4:11049738-11049757 Msa0669380:intron 35.0%
ACCAATCGATTAGACTCAAA+CGG - chr4_4:11049803-11049822 None:intergenic 35.0%
! AGGGTTTAAAATTATGGTCG+TGG + chr4_4:11050080-11050099 Msa0669380:intron 35.0%
GTCTAGATTGCAAAACAACA+AGG + chr4_4:11050181-11050200 Msa0669380:intron 35.0%
!!! AAGGTTTTAAAGTGTGGTTG+TGG + chr4_4:11050226-11050245 Msa0669380:intron 35.0%
! TGTTTGTGATCTTTTACGCA+TGG + chr4_4:11050463-11050482 Msa0669380:intron 35.0%
AAAAATGTCGCGATTATTGG+TGG + chr4_4:11050582-11050601 Msa0669380:intron 35.0%
AAAATGTCGCGATTATTGGT+GGG + chr4_4:11050583-11050602 Msa0669380:intron 35.0%
!! ATTGGTGGGTAATTTTATGG+TGG + chr4_4:11050597-11050616 Msa0669380:intron 35.0%
! TGTGACTACAAATTTGGTTC+TGG + chr4_4:11050658-11050677 Msa0669380:intron 35.0%
CTTGGTATAATGTGACATGT+GGG + chr4_4:11050698-11050717 Msa0669380:intron 35.0%
GTTACGCCAATAATGTTGAT+TGG + chr4_4:11050886-11050905 Msa0669380:intron 35.0%
ACCATCCCAATCAACATTAT+TGG - chr4_4:11050895-11050914 None:intergenic 35.0%
! AATAATGTTGATTGGGATGG+TGG + chr4_4:11050894-11050913 Msa0669380:intron 35.0%
! GAAAATTGTCGTTTAACAGG+AGG + chr4_4:11051036-11051055 Msa0669380:intron 35.0%
GTAGAAACCCGTAACTATAT+AGG + chr4_4:11051074-11051093 Msa0669380:intron 35.0%
!! CTCTGAAACACAAACAAACA+GGG - chr4_4:11051107-11051126 None:intergenic 35.0%
ATATACTCTTCAACCATGAG+CGG - chr4_4:11051141-11051160 None:intergenic 35.0%
!! CACTTTTGACTCTACTAAGA+TGG + chr4_4:11051165-11051184 Msa0669380:intron 35.0%
! TGGTCAAAATTTGTGCTGTT+TGG + chr4_4:11051353-11051372 Msa0669380:intron 35.0%
! TAACTAGCTTGCAGCATAAT+AGG - chr4_4:11051594-11051613 None:intergenic 35.0%
TGTTCATTCTCTTTCCTCTA+AGG - chr4_4:11051720-11051739 None:intergenic 35.0%
ATTGACTGGATCACAAATAG+AGG + chr4_4:11051751-11051770 Msa0669380:intron 35.0%
CTTCAATGGGATGATATTGA+TGG - chr4_4:11052102-11052121 None:intergenic 35.0%
! TTTTACAAGAGTTCTCACAG+TGG + chr4_4:11052132-11052151 Msa0669380:intron 35.0%
TGTTAAGATAAATCCCAAGC+AGG - chr4_4:11052182-11052201 None:intergenic 35.0%
TGAACAAGTGGATAGAAGAA+AGG - chr4_4:11052210-11052229 None:intergenic 35.0%
TTTGGCAGAATATGAACAAG+TGG - chr4_4:11052222-11052241 None:intergenic 35.0%
! CAACCTTAATGCTTCCTTTT+AGG + chr4_4:11052246-11052265 Msa0669380:intron 35.0%
!! GATCCTAAAAGGAAGCATTA+AGG - chr4_4:11052252-11052271 None:intergenic 35.0%
! GTTTTGTGTAGTCAGCTAAT+CGG - chr4_4:11052293-11052312 None:intergenic 35.0%
! ACAAGAAAAGTGTAAGGCAA+GGG - chr4_4:11052331-11052350 None:intergenic 35.0%
! TACAAGAAAAGTGTAAGGCA+AGG - chr4_4:11052332-11052351 None:intergenic 35.0%
GATTGACAGGTGAAGAAAAA+TGG - chr4_4:11052453-11052472 None:intergenic 35.0%
! CTTGACATCAACTATGGTTT+TGG - chr4_4:11052618-11052637 None:intergenic 35.0%
! ACCATAGTTGATGTCAAGTT+AGG + chr4_4:11052620-11052639 Msa0669380:intron 35.0%
ACCTAACTTGACATCAACTA+TGG - chr4_4:11052624-11052643 None:intergenic 35.0%
AGTTAGGTCTTCTAACTCAA+AGG + chr4_4:11052636-11052655 Msa0669380:intron 35.0%
ATCCAAGAATTTCTCCACTT+GGG + chr4_4:11052737-11052756 Msa0669380:intron 35.0%
GCCCTCAAATTTAAGCAATT+CGG + chr4_4:11052782-11052801 Msa0669380:intron 35.0%
ACACACAAATAAGGAGAAAG+AGG - chr4_4:11052869-11052888 None:intergenic 35.0%
! TCCTTATTTGTGTGTGACTT+TGG + chr4_4:11052874-11052893 Msa0669380:intron 35.0%
ACCAAAGTCACACACAAATA+AGG - chr4_4:11052878-11052897 None:intergenic 35.0%
! ATAAGGCATCAACTTTGAGA+CGG - chr4_4:11052932-11052951 None:intergenic 35.0%
ATAGGAGATACTATCCAACT+GGG - chr4_4:11053075-11053094 None:intergenic 35.0%
AATAGGAGATACTATCCAAC+TGG - chr4_4:11053076-11053095 None:intergenic 35.0%
TCCCAAAGAACTAAGAAAGT+AGG - chr4_4:11053172-11053191 None:intergenic 35.0%
! TTCTTAGTTCTTTGGGAGTT+AGG + chr4_4:11053175-11053194 Msa0669380:intron 35.0%
!!! ATTCGGGATTGTTTTTAGAC+GGG + chr4_4:11053241-11053260 Msa0669380:intron 35.0%
GGGAACTCAAAAGATGATTT+GGG - chr4_4:11053379-11053398 None:intergenic 35.0%
AGATAGTATCCAACAAGACA+TGG + chr4_4:11053673-11053692 Msa0669380:intron 35.0%
AGTTAGGAACCTTATGGTTT+AGG - chr4_4:11053853-11053872 None:intergenic 35.0%
CAATTCAGTTAGGAACCTTA+TGG - chr4_4:11053859-11053878 None:intergenic 35.0%
CATTGGGCTATTCTCATTAT+GGG + chr4_4:11054014-11054033 Msa0669380:intron 35.0%
!! TTTAATGTGGTGGCATTGAT+AGG - chr4_4:11054041-11054060 None:intergenic 35.0%
!!! CAAGGTTGTTTTTAATGTGG+TGG - chr4_4:11054051-11054070 None:intergenic 35.0%
!!! GGACAAGGTTGTTTTTAATG+TGG - chr4_4:11054054-11054073 None:intergenic 35.0%
TAAAAACAACCTTGTCCTCA+AGG + chr4_4:11054057-11054076 Msa0669380:intron 35.0%
TATATGACAGAGGGAAGATT+TGG - chr4_4:11054215-11054234 None:intergenic 35.0%
!! CTTGATTTGGTATATGACAG+AGG - chr4_4:11054225-11054244 None:intergenic 35.0%
AGCAAACCATAGATTGAAAG+TGG + chr4_4:11054243-11054262 Msa0669380:intron 35.0%
GGGAAGAACAATGTTCTTAT+GGG - chr4_4:11054300-11054319 None:intergenic 35.0%
AGGGAAGAACAATGTTCTTA+TGG - chr4_4:11054301-11054320 None:intergenic 35.0%
ATAAGAACATTGTTCTTCCC+TGG + chr4_4:11054300-11054319 Msa0669380:intron 35.0%
TCAAATAGAGGTTGTAGCAA+TGG - chr4_4:11054586-11054605 None:intergenic 35.0%
GAACGACCTTTCAGTTATAA+TGG - chr4_4:11054733-11054752 None:intergenic 35.0%
AGATAGGATGATGCATGAAA+AGG + chr4_4:11054816-11054835 Msa0669380:intron 35.0%
CCAAATATGAGTTCAAAACG+GGG + chr4_4:11054844-11054863 Msa0669380:intron 35.0%
AGGACCATATTTACTAGAAC+CGG + chr4_4:11054978-11054997 Msa0669380:intron 35.0%
TTACAATTACTATGTGGGCT+GGG - chr4_4:11055019-11055038 None:intergenic 35.0%
TTTACAATTACTATGTGGGC+TGG - chr4_4:11055020-11055039 None:intergenic 35.0%
!!! GACCCGACTTAATTTTAGTT+TGG - chr4_4:11055054-11055073 None:intergenic 35.0%
GAAAGGGTAAAAAGGAGATT+TGG - chr4_4:11055110-11055129 None:intergenic 35.0%
TGGAGAATGAAAGGGTAAAA+AGG - chr4_4:11055118-11055137 None:intergenic 35.0%
! GAAGATTCTGGAGAATGAAA+GGG - chr4_4:11055126-11055145 None:intergenic 35.0%
! AGAAGATTCTGGAGAATGAA+AGG - chr4_4:11055127-11055146 None:intergenic 35.0%
!! CACCGATTACGATTTTGTTA+AGG - chr4_4:11055174-11055193 None:intergenic 35.0%
! ACCTACATGATTTTGTTGAC+GGG - chr4_4:11055286-11055305 None:intergenic 35.0%
! GACCTACATGATTTTGTTGA+CGG - chr4_4:11055287-11055306 None:intergenic 35.0%
TCAACAAAATCATGTAGGTC+TGG + chr4_4:11055287-11055306 Msa0669380:intron 35.0%
AATCGGGTATGGAAAGAAAA+GGG - chr4_4:11055439-11055458 None:intergenic 35.0%
! TTTTCTTTCCATACCCGATT+CGG + chr4_4:11055439-11055458 Msa0669380:intron 35.0%
TCAACAGAGTGTGATTCTAA+CGG - chr4_4:11055651-11055670 None:intergenic 35.0%
AGTTAGGAACCTTATGGTTT+AGG - chr4_4:11053853-11053872 None:intergenic 35.0%
CAATTCAGTTAGGAACCTTA+TGG - chr4_4:11053859-11053878 None:intergenic 35.0%
CATTGGGCTATTCTCATTAT+GGG + chr4_4:11054014-11054033 Msa0669380:intron 35.0%
AATTGTTCACTGAATCACAG+AGG + chr4_4:11056201-11056220 Msa0669380:intron 35.0%
TGTGAATCTCTACTGTCTAT+TGG + chr4_4:11056380-11056399 Msa0669380:intron 35.0%
ATGAAGAATAAATGGGACAC+GGG - chr4_4:11056481-11056500 None:intergenic 35.0%
CATGAAGAATAAATGGGACA+CGG - chr4_4:11056482-11056501 None:intergenic 35.0%
GTGTCCCATTTATTCTTCAT+GGG + chr4_4:11056481-11056500 Msa0669380:intron 35.0%
TGTCCCATTTATTCTTCATG+GGG + chr4_4:11056482-11056501 Msa0669380:intron 35.0%
ACACCCCATGAAGAATAAAT+GGG - chr4_4:11056488-11056507 None:intergenic 35.0%
ATGCAATCCATGGAAACAAA+TGG + chr4_4:11056658-11056677 Msa0669380:CDS 35.0%
TGCAATCCATGGAAACAAAT+GGG + chr4_4:11056659-11056678 Msa0669380:CDS 35.0%
ATAATGCCATTAAGAACCAC+TGG + chr4_4:11056715-11056734 Msa0669380:CDS 35.0%
AGAATTCCAGTGGTTCTTAA+TGG - chr4_4:11056724-11056743 None:intergenic 35.0%
GTTAGAATCTAGTAACATGG+GGG + chr4_4:11056791-11056810 Msa0669380:CDS 35.0%
TTAGAATCTAGTAACATGGG+GGG + chr4_4:11056792-11056811 Msa0669380:CDS 35.0%
AGTTTCTTCAGATGATGCTT+TGG - chr4_4:11056838-11056857 None:intergenic 35.0%
TCTGAAGAAACTCTATCATG+TGG + chr4_4:11056846-11056865 Msa0669380:CDS 35.0%
!! AGGAAGAGATGTTAGTTCTA+TGG + chr4_4:11056896-11056915 Msa0669380:CDS 35.0%
AATGCGTATAACGCTTTCAA+TGG + chr4_4:11057029-11057048 Msa0669380:CDS 35.0%
TGTAAAATAGGTCCTTGCAT+TGG - chr4_4:11057089-11057108 None:intergenic 35.0%
ACATTCACCAAAATCAGATG+CGG + chr4_4:11057106-11057125 Msa0669380:CDS 35.0%
! CAAATTTCCGCATCTGATTT+TGG - chr4_4:11057116-11057135 None:intergenic 35.0%
TTAACAGAACTATTGTCGAC+CGG + chr4_4:11057144-11057163 Msa0669380:CDS 35.0%
AACTCCAAAAGCTCTTTGTT+GGG + chr4_4:11057215-11057234 Msa0669380:CDS 35.0%
ACTAACAAGACGACTGAGAA+TGG - chr4_4:11049484-11049503 None:intergenic 40.0%
! AGTCGTCTTGTTAGTCAGTT+CGG + chr4_4:11049489-11049508 Msa0669380:CDS 40.0%
TTGATTGCTCGTGGAATTTC+TGG + chr4_4:11049528-11049547 Msa0669380:CDS 40.0%
! TCGTGGAATTTCTGGAAGAT+CGG + chr4_4:11049536-11049555 Msa0669380:CDS 40.0%
GATCAAGCTGATTACACCAT+CGG - chr4_4:11049578-11049597 None:intergenic 40.0%
GTTAAACGAAAACCCTTCAC+TGG + chr4_4:11049603-11049622 Msa0669380:intron 40.0%
ACAAGTTTCGTACCAGTGAA+GGG - chr4_4:11049618-11049637 None:intergenic 40.0%
AACAAGTTTCGTACCAGTGA+AGG - chr4_4:11049619-11049638 None:intergenic 40.0%
GTTGTTAAACGTTCCGGTTT+AGG + chr4_4:11049666-11049685 Msa0669380:intron 40.0%
TTAAACGTTCCGGTTTAGGA+AGG + chr4_4:11049670-11049689 Msa0669380:intron 40.0%
TAAACGTTCCGGTTTAGGAA+GGG + chr4_4:11049671-11049690 Msa0669380:intron 40.0%
GTTGTGAGGTAAGTAAAGTC+TGG + chr4_4:11049715-11049734 Msa0669380:intron 40.0%
ACCGTTTGAGTCTAATCGAT+TGG + chr4_4:11049799-11049818 Msa0669380:intron 40.0%
CGTTTACTTGTGGTCAAATG+TGG + chr4_4:11050104-11050123 Msa0669380:intron 40.0%
TTACTTGTGGTCAAATGTGG+CGG + chr4_4:11050107-11050126 Msa0669380:intron 40.0%
AAAGAATCGTGGTCAATGTG+TGG + chr4_4:11050262-11050281 Msa0669380:intron 40.0%
! TGTTTCTACAGCTGCAATTG+AGG - chr4_4:11050312-11050331 None:intergenic 40.0%
ATCCTTTACGTGGTCAAATG+TGG + chr4_4:11050375-11050394 Msa0669380:intron 40.0%
TGTCTATACGACTGCAATTG+AGG - chr4_4:11050411-11050430 None:intergenic 40.0%
! CTTTTACGCATGGTCAAATG+TGG + chr4_4:11050473-11050492 Msa0669380:intron 40.0%
TAATAGTGTGGCCTAGATAG+CGG + chr4_4:11050539-11050558 Msa0669380:intron 40.0%
CCACATGTCACATTATACCA+AGG - chr4_4:11050700-11050719 None:intergenic 40.0%
CCTTGGTATAATGTGACATG+TGG + chr4_4:11050697-11050716 Msa0669380:intron 40.0%
! GCCAATAATGTTGATTGGGA+TGG + chr4_4:11050891-11050910 Msa0669380:intron 40.0%
CACTACTATAGCAAGAGTCA+AGG - chr4_4:11050953-11050972 None:intergenic 40.0%
TGTGATTGATGTTTGCCAAG+TGG + chr4_4:11050971-11050990 Msa0669380:intron 40.0%
TGAACCACTCCGGAAAAATA+GGG + chr4_4:11051010-11051029 Msa0669380:intron 40.0%
!! CCTCTGAAACACAAACAAAC+AGG - chr4_4:11051108-11051127 None:intergenic 40.0%
CCTGTTTGTTTGTGTTTCAG+AGG + chr4_4:11051105-11051124 Msa0669380:intron 40.0%
ACAAGGAAGCTCAAATGATG+AGG - chr4_4:11051224-11051243 None:intergenic 40.0%
! AGCCAAGTAGGTTTTGCTTA+TGG + chr4_4:11051333-11051352 Msa0669380:intron 40.0%
GACCATAAGCAAAACCTACT+TGG - chr4_4:11051338-11051357 None:intergenic 40.0%
! TGCTGTTTGGTTTCAATACC+AGG + chr4_4:11051366-11051385 Msa0669380:intron 40.0%
TGAAGGAAAACACATGGAAG+AGG - chr4_4:11051794-11051813 None:intergenic 40.0%
AAAGGCTGAAGGAAAACACA+TGG - chr4_4:11051800-11051819 None:intergenic 40.0%
CAGTAGTGACTCACTTGTAA+AGG - chr4_4:11051818-11051837 None:intergenic 40.0%
CAGTTAGCATTGTTAACCCA+AGG - chr4_4:11051938-11051957 None:intergenic 40.0%
AGATAGCACTGTTAAGGCTA+GGG - chr4_4:11052026-11052045 None:intergenic 40.0%
TTAGCCAGATAGCACTGTTA+AGG - chr4_4:11052032-11052051 None:intergenic 40.0%
GAGTAATCATAGAACCAGCT+GGG - chr4_4:11052058-11052077 None:intergenic 40.0%
! TGATGGACCAAGAGAGTAAT+CGG - chr4_4:11052085-11052104 None:intergenic 40.0%
! CAAGAAAAGTGTAAGGCAAG+GGG - chr4_4:11052330-11052349 None:intergenic 40.0%
!!! ATCAACTATGGTTTTGGGCA+AGG - chr4_4:11052612-11052631 None:intergenic 40.0%
AGAAATTCTTGGATCTGCAC+TGG - chr4_4:11052731-11052750 None:intergenic 40.0%
GATCCAAGAATTTCTCCACT+TGG + chr4_4:11052736-11052755 Msa0669380:intron 40.0%
TTTGAGGGCAGCAATTTGAT+GGG - chr4_4:11052771-11052790 None:intergenic 40.0%
ATTTGAGGGCAGCAATTTGA+TGG - chr4_4:11052772-11052791 None:intergenic 40.0%
GTCACAAAAGGATGGTGATT+TGG - chr4_4:11052845-11052864 None:intergenic 40.0%
AAAGAGGAGTCACAAAAGGA+TGG - chr4_4:11052853-11052872 None:intergenic 40.0%
! GTGTGTGACTTTGGTGTATT+TGG + chr4_4:11052883-11052902 Msa0669380:intron 40.0%
ACTATCCAACTGGGTACAAT+CGG - chr4_4:11053066-11053085 None:intergenic 40.0%
! TTAGTTCTTTGGGAGTTAGG+AGG + chr4_4:11053178-11053197 Msa0669380:intron 40.0%
AACAATCCCGAATAAAGCGA+GGG - chr4_4:11053234-11053253 None:intergenic 40.0%
AAACAATCCCGAATAAAGCG+AGG - chr4_4:11053235-11053254 None:intergenic 40.0%
GGGGAACTCAAAAGATGATT+TGG - chr4_4:11053380-11053399 None:intergenic 40.0%
!!! TCTTTTGAGTTCCCCCAAAT+TGG + chr4_4:11053385-11053404 Msa0669380:intron 40.0%
AAAGAGAGGGGAAAGAGAAA+GGG - chr4_4:11053479-11053498 None:intergenic 40.0%
AAAAGAGAGGGGAAAGAGAA+AGG - chr4_4:11053480-11053499 None:intergenic 40.0%
AAGTTGAAGGGAAAAGAGAG+GGG - chr4_4:11053491-11053510 None:intergenic 40.0%
GAAGTTGAAGGGAAAAGAGA+GGG - chr4_4:11053492-11053511 None:intergenic 40.0%
TCCAACAAGACATGGTACAT+TGG + chr4_4:11053681-11053700 Msa0669380:intron 40.0%
TCCAATGTACCATGTCTTGT+TGG - chr4_4:11053685-11053704 None:intergenic 40.0%
AGAGAAATGTCTCTTCTCTG+AGG - chr4_4:11053825-11053844 None:intergenic 40.0%
CTTTCGAGCACAATTCAGTT+AGG - chr4_4:11053869-11053888 None:intergenic 40.0%
AATAGCCCAATGGATAGTAG+AGG - chr4_4:11054006-11054025 None:intergenic 40.0%
CCATAATGAGAATAGCCCAA+TGG - chr4_4:11054016-11054035 None:intergenic 40.0%
CCATTGGGCTATTCTCATTA+TGG + chr4_4:11054013-11054032 Msa0669380:intron 40.0%
! TTTTCCAAGTACCAACCTTG+AGG - chr4_4:11054075-11054094 None:intergenic 40.0%
! AATGGATTCCTCCAATACAC+TGG + chr4_4:11054103-11054122 Msa0669380:intron 40.0%
TTGATGTCCAACCAGTGTAT+TGG - chr4_4:11054117-11054136 None:intergenic 40.0%
CAATTGCACCTAGATGCTTA+AGG + chr4_4:11054134-11054153 Msa0669380:intron 40.0%
!! GTTTTGGTCCTTAAGCATCT+AGG - chr4_4:11054145-11054164 None:intergenic 40.0%
! CATTTGGGTACTGCTTATGT+TGG - chr4_4:11054184-11054203 None:intergenic 40.0%
AGGCAGTGAGAGGAATTTAT+GGG - chr4_4:11054398-11054417 None:intergenic 40.0%
AAGGCAGTGAGAGGAATTTA+TGG - chr4_4:11054399-11054418 None:intergenic 40.0%
AATAGAGGTTGTAGCAATGG+AGG - chr4_4:11054583-11054602 None:intergenic 40.0%
TTTATGAAGTAGCAGCAACC+AGG - chr4_4:11054695-11054714 None:intergenic 40.0%
ACTTGGATGCCTCTACATAA+AGG - chr4_4:11054775-11054794 None:intergenic 40.0%
!! CCCCGTTTTGAACTCATATT+TGG - chr4_4:11054847-11054866 None:intergenic 40.0%
!!! GGAAGAGAGAAAGCACTTTT+TGG + chr4_4:11054865-11054884 Msa0669380:intron 40.0%
GGACCATATTTACTAGAACC+GGG + chr4_4:11054979-11054998 Msa0669380:intron 40.0%
! TGACCCGGTTCTAGTAAATA+TGG - chr4_4:11054985-11055004 None:intergenic 40.0%
AAATCGTAATCGGTGTACAG+TGG + chr4_4:11055179-11055198 Msa0669380:intron 40.0%
!! AGTGGTTCTGACAACTTTGA+TGG + chr4_4:11055197-11055216 Msa0669380:intron 40.0%
AGGTACAAATGAGTCTTGGT+GGG - chr4_4:11055226-11055245 None:intergenic 40.0%
AAGGTACAAATGAGTCTTGG+TGG - chr4_4:11055227-11055246 None:intergenic 40.0%
! GGAAAGGTACAAATGAGTCT+TGG - chr4_4:11055230-11055249 None:intergenic 40.0%
! CCTACATGATTTTGTTGACG+GGG - chr4_4:11055285-11055304 None:intergenic 40.0%
ACAAAATCATGTAGGTCTGG+TGG + chr4_4:11055290-11055309 Msa0669380:intron 40.0%
GAATCGGGTATGGAAAGAAA+AGG - chr4_4:11055440-11055459 None:intergenic 40.0%
!! CAAAACGCTTGGTTCTAAAG+GGG - chr4_4:11055621-11055640 None:intergenic 40.0%
!! GCAAAACGCTTGGTTCTAAA+GGG - chr4_4:11055622-11055641 None:intergenic 40.0%
!! AGCAAAACGCTTGGTTCTAA+AGG - chr4_4:11055623-11055642 None:intergenic 40.0%
AGATGCATTAGAGACTCAGA+TGG - chr4_4:11055738-11055757 None:intergenic 40.0%
CTAATGCATCTACAAATCGC+CGG + chr4_4:11055747-11055766 Msa0669380:intron 40.0%
AGAGAAATGTCTCTTCTCTG+AGG - chr4_4:11053825-11053844 None:intergenic 40.0%
CTTTCGAGCACAATTCAGTT+AGG - chr4_4:11053869-11053888 None:intergenic 40.0%
AATAGCCCAATGGATAGTAG+AGG - chr4_4:11054006-11054025 None:intergenic 40.0%
CCATAATGAGAATAGCCCAA+TGG - chr4_4:11054016-11054035 None:intergenic 40.0%
CCATTGGGCTATTCTCATTA+TGG + chr4_4:11054013-11054032 Msa0669380:intron 40.0%
!! AGATTTTAGAGAGGAAGCTG+AGG + chr4_4:11056145-11056164 Msa0669380:intron 40.0%
!! GATTTTAGAGAGGAAGCTGA+GGG + chr4_4:11056146-11056165 Msa0669380:intron 40.0%
AATGATGCGACATAGACACA+GGG - chr4_4:11056453-11056472 None:intergenic 40.0%
AAATGATGCGACATAGACAC+AGG - chr4_4:11056454-11056473 None:intergenic 40.0%
CGTGTCCCATTTATTCTTCA+TGG + chr4_4:11056480-11056499 Msa0669380:intron 40.0%
CACACCCCATGAAGAATAAA+TGG - chr4_4:11056489-11056508 None:intergenic 40.0%
!! GTTTTTCAGATGAGGAAGAC+CGG + chr4_4:11056619-11056638 Msa0669380:intron 40.0%
ATGGCATTATCTGTTCTTCC+TGG - chr4_4:11056705-11056724 None:intergenic 40.0%
ACTAACATCTCTTCCTTCTG+AGG - chr4_4:11056892-11056911 None:intergenic 40.0%
!! ACGTGCTACTGGCTTAAAAA+GGG - chr4_4:11056997-11057016 None:intergenic 40.0%
CAACTCCAAAAGCTCTTTGT+TGG + chr4_4:11057214-11057233 Msa0669380:CDS 40.0%
CAGACATTAGTAACCTTGCT+TGG + chr4_4:11057303-11057322 Msa0669380:CDS 40.0%
AACCTTGCTTGGCTTAAAAG+TGG + chr4_4:11057314-11057333 Msa0669380:CDS 40.0%
!! ATCCACTTTTAAGCCAAGCA+AGG - chr4_4:11057319-11057338 None:intergenic 40.0%
TGCTTGGCTTAAAAGTGGAT+TGG + chr4_4:11057319-11057338 Msa0669380:CDS 40.0%
AACAGCAGCGTCAAAATGAT+GGG + chr4_4:11057344-11057363 Msa0669380:CDS 40.0%
!! AAAATGATGGGTGATACTGC+TGG + chr4_4:11057356-11057375 Msa0669380:CDS 40.0%
CTGGCAGGGTTAATATCTAA+TGG + chr4_4:11057375-11057394 Msa0669380:CDS 40.0%
TCATGATTACATACTGGCCA+TGG + chr4_4:11057399-11057418 Msa0669380:three_prime_UTR 40.0%
TGACATTATGCACATCCATC+CGG - chr4_4:11057460-11057479 None:intergenic 40.0%
AGTAGCGGTAGCAAAGTGAA+AGG + chr4_4:11049435-11049454 Msa0669380:CDS 45.0%
GTAGCAAAGTGAAAGGACCT+TGG + chr4_4:11049442-11049461 Msa0669380:CDS 45.0%
AACTGGAGTTTGATTGCTCG+TGG + chr4_4:11049519-11049538 Msa0669380:CDS 45.0%
! CGTGGAATTTCTGGAAGATC+GGG + chr4_4:11049537-11049556 Msa0669380:CDS 45.0%
! GTGGAATTTCTGGAAGATCG+GGG + chr4_4:11049538-11049557 Msa0669380:CDS 45.0%
AAACGTTCCGGTTTAGGAAG+GGG + chr4_4:11049672-11049691 Msa0669380:intron 45.0%
GAATGGTTGTGTGTGCATTG+AGG + chr4_4:11049940-11049959 Msa0669380:intron 45.0%
TACTTGTGGTCAAATGTGGC+GGG + chr4_4:11050108-11050127 Msa0669380:intron 45.0%
! TGTGGTTGTGGTCTTTTACG+CGG + chr4_4:11050238-11050257 Msa0669380:intron 45.0%
! TTTTACGCGGGAAAGAATCG+TGG + chr4_4:11050251-11050270 Msa0669380:intron 45.0%
GGTCAATGTGTGGTCAAATG+TGG + chr4_4:11050272-11050291 Msa0669380:intron 45.0%
AATGTGTGGTCAAATGTGGC+TGG + chr4_4:11050276-11050295 Msa0669380:intron 45.0%
TGTGTTCGTGATCCTTTACG+TGG + chr4_4:11050365-11050384 Msa0669380:intron 45.0%
AGCCACATTTGACCACGTAA+AGG - chr4_4:11050380-11050399 None:intergenic 45.0%
TTGTGTGACCTCAATTGGAG+TGG + chr4_4:11050497-11050516 Msa0669380:intron 45.0%
TGTCTCAACCACTCCAATTG+AGG - chr4_4:11050508-11050527 None:intergenic 45.0%
GTGAACCACTCCGGAAAAAT+AGG + chr4_4:11051009-11051028 Msa0669380:intron 45.0%
TGAACTCGATGCTCTGACAT+AGG + chr4_4:11051197-11051216 Msa0669380:intron 45.0%
ATCTTGTTCTGCAGCCAAGT+AGG + chr4_4:11051321-11051340 Msa0669380:intron 45.0%
ATTCAAGAGTCTTGCTCACG+TGG + chr4_4:11051653-11051672 Msa0669380:intron 45.0%
AAGAGAGCTGAGTACCTTAG+AGG + chr4_4:11051703-11051722 Msa0669380:intron 45.0%
GGATCACAAATAGAGGCCAA+TGG + chr4_4:11051758-11051777 Msa0669380:intron 45.0%
!! AAGAGGAGTGTTGTCTCCAT+TGG - chr4_4:11051777-11051796 None:intergenic 45.0%
GACTCACTTGTAAAGGCTGA+AGG - chr4_4:11051811-11051830 None:intergenic 45.0%
GGTTAGCACGGTTAAGGATA+GGG - chr4_4:11051906-11051925 None:intergenic 45.0%
TGGTTAGCACGGTTAAGGAT+AGG - chr4_4:11051907-11051926 None:intergenic 45.0%
TTAGCTGGTTAGCACGGTTA+AGG - chr4_4:11051912-11051931 None:intergenic 45.0%
CAGATAGCACTGTTAAGGCT+AGG - chr4_4:11052027-11052046 None:intergenic 45.0%
!! CTAGCCTTAACAGTGCTATC+TGG + chr4_4:11052025-11052044 Msa0669380:intron 45.0%
GGAGTAATCATAGAACCAGC+TGG - chr4_4:11052059-11052078 None:intergenic 45.0%
! CCAAGCAGGAGAAGTACAAT+GGG - chr4_4:11052168-11052187 None:intergenic 45.0%
CCATTGTACTTCTCCTGCTT+GGG + chr4_4:11052166-11052185 Msa0669380:intron 45.0%
!!! TCCTTTTAGGATCCTGTGCA+TGG + chr4_4:11052259-11052278 Msa0669380:intron 45.0%
!!! CCTTTTAGGATCCTGTGCAT+GGG + chr4_4:11052260-11052279 Msa0669380:intron 45.0%
TGGGATATTCGAGGATTGAC+AGG - chr4_4:11052466-11052485 None:intergenic 45.0%
TGTCAATCCTCGAATATCCC+AGG + chr4_4:11052465-11052484 Msa0669380:intron 45.0%
CATAGGCTTGAAAGATCCAG+AGG - chr4_4:11052498-11052517 None:intergenic 45.0%
!!! TGGTTTTGGGCAAGGAGTAT+GGG - chr4_4:11052604-11052623 None:intergenic 45.0%
!!! ATGGTTTTGGGCAAGGAGTA+TGG - chr4_4:11052605-11052624 None:intergenic 45.0%
AGGTCTTCTAACTCAAAGGC+TGG + chr4_4:11052640-11052659 Msa0669380:intron 45.0%
!! TTGAGTTTGCAAGCACTGAG+AGG - chr4_4:11052683-11052702 None:intergenic 45.0%
TGCCCAAGTGGAGAAATTCT+TGG - chr4_4:11052742-11052761 None:intergenic 45.0%
GGAGAAAGAGGAGTCACAAA+AGG - chr4_4:11052857-11052876 None:intergenic 45.0%
!! CAACTTTGAGACGGAAGAAG+AGG - chr4_4:11052923-11052942 None:intergenic 45.0%
!! CCATGGAGAGTGTCCTTTAA+TGG - chr4_4:11053027-11053046 None:intergenic 45.0%
CCATTAAAGGACACTCTCCA+TGG + chr4_4:11053024-11053043 Msa0669380:intron 45.0%
TGTTTCCGATTGTACCCAGT+TGG + chr4_4:11053058-11053077 Msa0669380:intron 45.0%
GGAGTTAGGAGGTGAAGAAA+GGG + chr4_4:11053189-11053208 Msa0669380:intron 45.0%
GAGTTAGGAGGTGAAGAAAG+GGG + chr4_4:11053190-11053209 Msa0669380:intron 45.0%
! GGGTAATCCCTCGCTTTATT+CGG + chr4_4:11053224-11053243 Msa0669380:intron 45.0%
! GGTAATCCCTCGCTTTATTC+GGG + chr4_4:11053225-11053244 Msa0669380:intron 45.0%
!!! GGGATTGTTTTTAGACGGGA+GGG + chr4_4:11053245-11053264 Msa0669380:intron 45.0%
!!! TTGTTTTTAGACGGGAGGGA+AGG + chr4_4:11053249-11053268 Msa0669380:intron 45.0%
! TTTGAGTTCCCCCAAATTGG+AGG + chr4_4:11053388-11053407 Msa0669380:intron 45.0%
TTGAGTTCCCCCAAATTGGA+GGG + chr4_4:11053389-11053408 Msa0669380:intron 45.0%
TGCCAGAAACCCTCCAATTT+GGG - chr4_4:11053401-11053420 None:intergenic 45.0%
ATGCCAGAAACCCTCCAATT+TGG - chr4_4:11053402-11053421 None:intergenic 45.0%
AAATGAAACCCCTTGCCAAG+TGG + chr4_4:11053437-11053456 Msa0669380:intron 45.0%
AATGAAACCCCTTGCCAAGT+GGG + chr4_4:11053438-11053457 Msa0669380:intron 45.0%
GGAAGTTGAAGGGAAAAGAG+AGG - chr4_4:11053493-11053512 None:intergenic 45.0%
! TGCCTGTGCTTGCAAGTTTT+GGG + chr4_4:11053633-11053652 Msa0669380:intron 45.0%
CTCTCTCTGCCTAAACCATA+AGG + chr4_4:11053841-11053860 Msa0669380:intron 45.0%
GGAAAAATGGGAAACACACG+TGG - chr4_4:11053961-11053980 None:intergenic 45.0%
! GAGGTGGCTAGTTAGTTAGA+GGG - chr4_4:11053982-11054001 None:intergenic 45.0%
! TGAGGTGGCTAGTTAGTTAG+AGG - chr4_4:11053983-11054002 None:intergenic 45.0%
AATGGATAGTAGAGGTGAGG+TGG - chr4_4:11053998-11054017 None:intergenic 45.0%
ACCTCACCTCTACTATCCAT+TGG + chr4_4:11053997-11054016 Msa0669380:intron 45.0%
CCTCACCTCTACTATCCATT+GGG + chr4_4:11053998-11054017 Msa0669380:intron 45.0%
AACAACCTTGTCCTCAAGGT+TGG + chr4_4:11054061-11054080 Msa0669380:intron 45.0%
AAGTACCAACCTTGAGGACA+AGG - chr4_4:11054069-11054088 None:intergenic 45.0%
!! TTGTCCTCAAGGTTGGTACT+TGG + chr4_4:11054068-11054087 Msa0669380:intron 45.0%
GATTCCTCCAATACACTGGT+TGG + chr4_4:11054107-11054126 Msa0669380:intron 45.0%
ATGTCCAACCAGTGTATTGG+AGG - chr4_4:11054114-11054133 None:intergenic 45.0%
TTTGTAAGGAAGGCAGTGAG+AGG - chr4_4:11054408-11054427 None:intergenic 45.0%
ACGTGTGCTCTTTGTAAGGA+AGG - chr4_4:11054418-11054437 None:intergenic 45.0%
TTCTCAGCAGCATGACAACA+CGG + chr4_4:11054547-11054566 Msa0669380:intron 45.0%
!! TAGAGGCATCCAAGTGAAGT+TGG + chr4_4:11054780-11054799 Msa0669380:intron 45.0%
ATATCTATTGACACTGGGCC+TGG - chr4_4:11054919-11054938 None:intergenic 45.0%
!! AATTACTATGTGGGCTGGGA+TGG - chr4_4:11055015-11055034 None:intergenic 45.0%
TGCTGAAGGTGAGAAGATTC+TGG - chr4_4:11055138-11055157 None:intergenic 45.0%
! GGTTCTGACAACTTTGATGG+TGG + chr4_4:11055200-11055219 Msa0669380:intron 45.0%
AAATCGAGCGTCAAGAAGAG+AGG - chr4_4:11055251-11055270 None:intergenic 45.0%
CCCCGTCAACAAAATCATGT+AGG + chr4_4:11055282-11055301 Msa0669380:intron 45.0%
AACCCGTGACAATAGTTCCA+CGG - chr4_4:11055334-11055353 None:intergenic 45.0%
GGCGGATATGACAGATTCAA+CGG + chr4_4:11055383-11055402 Msa0669380:intron 45.0%
GGATATGACAGATTCAACGG+TGG + chr4_4:11055386-11055405 Msa0669380:intron 45.0%
GGAAAGAAAAGGGAAGCAAG+AGG - chr4_4:11055429-11055448 None:intergenic 45.0%
GAAATCGTTCACACCGAATC+GGG - chr4_4:11055455-11055474 None:intergenic 45.0%
GGAAATCGTTCACACCGAAT+CGG - chr4_4:11055456-11055475 None:intergenic 45.0%
!! GATTCGGTGTGAACGATTTC+CGG + chr4_4:11055455-11055474 Msa0669380:intron 45.0%
AGTTCGTCGACACTTGTTTC+AGG - chr4_4:11055506-11055525 None:intergenic 45.0%
ACGGAATTGAGCAAAACGCT+TGG - chr4_4:11055632-11055651 None:intergenic 45.0%
TATCAATTGGTCCGACCTAC+CGG - chr4_4:11055790-11055809 None:intergenic 45.0%
CTCTCTCTGCCTAAACCATA+AGG + chr4_4:11053841-11053860 Msa0669380:intron 45.0%
GGAAAAATGGGAAACACACG+TGG - chr4_4:11053961-11053980 None:intergenic 45.0%
! GAGGTGGCTAGTTAGTTAGA+GGG - chr4_4:11053982-11054001 None:intergenic 45.0%
! TGAGGTGGCTAGTTAGTTAG+AGG - chr4_4:11053983-11054002 None:intergenic 45.0%
AATGGATAGTAGAGGTGAGG+TGG - chr4_4:11053998-11054017 None:intergenic 45.0%
ACCTCACCTCTACTATCCAT+TGG + chr4_4:11053997-11054016 Msa0669380:intron 45.0%
CCTCACCTCTACTATCCATT+GGG + chr4_4:11053998-11054017 Msa0669380:intron 45.0%
GATTCAGTGAACAATTGCGC+AGG - chr4_4:11056197-11056216 None:intergenic 45.0%
TTCATGGGGTGTGATCTTCA+AGG + chr4_4:11056496-11056515 Msa0669380:intron 45.0%
CATGAGCAGCAACTATGATC+CGG - chr4_4:11056641-11056660 None:intergenic 45.0%
ACCACTGGAATTCTACTCTG+AGG + chr4_4:11056730-11056749 Msa0669380:CDS 45.0%
!! GCTACTGGCTTAAAAAGGGT+CGG - chr4_4:11056993-11057012 None:intergenic 45.0%
!! CACGTGCTACTGGCTTAAAA+AGG - chr4_4:11056998-11057017 None:intergenic 45.0%
! AAAGCACTTACACGTGCTAC+TGG - chr4_4:11057008-11057027 None:intergenic 45.0%
ATAGGTCCTTGCATTGGAAC+AGG - chr4_4:11057083-11057102 None:intergenic 45.0%
! CATCCATGACCACACTGATT+AGG - chr4_4:11057176-11057195 None:intergenic 45.0%
! TGGTCCCAACAAAGAGCTTT+TGG - chr4_4:11057222-11057241 None:intergenic 45.0%
GAACAGCAGCGTCAAAATGA+TGG + chr4_4:11057343-11057362 Msa0669380:CDS 45.0%
AGGGCAAATCTTAATGGGAC+CGG + chr4_4:11057438-11057457 Msa0669380:three_prime_UTR 45.0%
CAAATCTTAATGGGACCGGA+TGG + chr4_4:11057442-11057461 Msa0669380:three_prime_UTR 45.0%
!! TAAAAAAAATATTAATAATG+TGG + chr4_4:11050159-11050178 Msa0669380:intron 5.0%
!! GGAGTTGGTGGTTGTTGTTC+TGG - chr4_4:11049351-11049370 None:intergenic 50.0%
ACAACAACCACCAACTCCCA+CGG + chr4_4:11049353-11049372 Msa0669380:CDS 50.0%
GACGAAGGTTTAGCCGCATT+AGG + chr4_4:11049396-11049415 Msa0669380:CDS 50.0%
CTGAGAATGGCGTCTTCTTC+AGG - chr4_4:11049471-11049490 None:intergenic 50.0%
!! GTCAGTTCGGTGCTAGAAAC+TGG + chr4_4:11049502-11049521 Msa0669380:CDS 50.0%
ACAAGAGCCCCTTCCTAAAC+CGG - chr4_4:11049682-11049701 None:intergenic 50.0%
TGGTCGTGGTCGTTTACTTG+TGG + chr4_4:11050094-11050113 Msa0669380:intron 50.0%
TGTCTCTACGACTCCAAGTG+AGG - chr4_4:11050139-11050158 None:intergenic 50.0%
! GTGGTTGTGGTCTTTTACGC+GGG + chr4_4:11050239-11050258 Msa0669380:intron 50.0%
! GTGGTCAAATGTGGCTTGTG+TGG + chr4_4:11050384-11050403 Msa0669380:intron 50.0%
! GTGGCTTGTGTGACCTCAAT+TGG + chr4_4:11050492-11050511 Msa0669380:intron 50.0%
AAGGTCTGCAACCGCTATCT+AGG - chr4_4:11050553-11050572 None:intergenic 50.0%
!! CACACCCTATTTTTCCGGAG+TGG - chr4_4:11051017-11051036 None:intergenic 50.0%
TGTGTTTCAGAGGCCCCAAA+TGG + chr4_4:11051115-11051134 Msa0669380:intron 50.0%
TCAACCATGAGCGGCCATTT+GGG - chr4_4:11051132-11051151 None:intergenic 50.0%
TTCAACCATGAGCGGCCATT+TGG - chr4_4:11051133-11051152 None:intergenic 50.0%
AGGCAGTTAGCTGGTTAGCA+CGG - chr4_4:11051918-11051937 None:intergenic 50.0%
TGCTAACCAGCTAACTGCCT+TGG + chr4_4:11051918-11051937 Msa0669380:intron 50.0%
GCTAACCAGCTAACTGCCTT+GGG + chr4_4:11051919-11051938 Msa0669380:intron 50.0%
GTTAACCCAAGGCAGTTAGC+TGG - chr4_4:11051927-11051946 None:intergenic 50.0%
CTCCAAGCCGATTACTCTCT+TGG + chr4_4:11052075-11052094 Msa0669380:intron 50.0%
GACCAAGAGAGTAATCGGCT+TGG - chr4_4:11052080-11052099 None:intergenic 50.0%
CCCATTGTACTTCTCCTGCT+TGG + chr4_4:11052165-11052184 Msa0669380:intron 50.0%
! CCCAAGCAGGAGAAGTACAA+TGG - chr4_4:11052169-11052188 None:intergenic 50.0%
CCCATGCACAGGATCCTAAA+AGG - chr4_4:11052263-11052282 None:intergenic 50.0%
TTAGGATCCTGTGCATGGGA+TGG + chr4_4:11052264-11052283 Msa0669380:intron 50.0%
TAGGATCCTGTGCATGGGAT+GGG + chr4_4:11052265-11052284 Msa0669380:intron 50.0%
AGCAACTCCTGGGATATTCG+AGG - chr4_4:11052475-11052494 None:intergenic 50.0%
GAAACAGAGGACAGAAGCCA+TGG - chr4_4:11053044-11053063 None:intergenic 50.0%
CTGGGTACAATCGGAAACAG+AGG - chr4_4:11053057-11053076 None:intergenic 50.0%
GGGAGTTAGGAGGTGAAGAA+AGG + chr4_4:11053188-11053207 Msa0669380:intron 50.0%
TTAGGAGGTGAAGAAAGGGG+AGG + chr4_4:11053193-11053212 Msa0669380:intron 50.0%
TAGGAGGTGAAGAAAGGGGA+GGG + chr4_4:11053194-11053213 Msa0669380:intron 50.0%
GTGAAGAAAGGGGAGGGAAA+GGG + chr4_4:11053200-11053219 Msa0669380:intron 50.0%
!!! CGGGATTGTTTTTAGACGGG+AGG + chr4_4:11053244-11053263 Msa0669380:intron 50.0%
CCAGAAACCCTCCAATTTGG+GGG - chr4_4:11053399-11053418 None:intergenic 50.0%
GCCAGAAACCCTCCAATTTG+GGG - chr4_4:11053400-11053419 None:intergenic 50.0%
ATGAAACCCCTTGCCAAGTG+GGG + chr4_4:11053439-11053458 Msa0669380:intron 50.0%
ATAGTTCCCCACTTGGCAAG+GGG - chr4_4:11053448-11053467 None:intergenic 50.0%
GATAGTTCCCCACTTGGCAA+GGG - chr4_4:11053449-11053468 None:intergenic 50.0%
AGGGGAAAGAGAAAGGGAAG+GGG - chr4_4:11053473-11053492 None:intergenic 50.0%
GAGGGGAAAGAGAAAGGGAA+GGG - chr4_4:11053474-11053493 None:intergenic 50.0%
AGAGGGGAAAGAGAAAGGGA+AGG - chr4_4:11053475-11053494 None:intergenic 50.0%
ACAGTTCACCCCTCTCAAGA+TGG + chr4_4:11053610-11053629 Msa0669380:intron 50.0%
! GTGCCTGTGCTTGCAAGTTT+TGG + chr4_4:11053632-11053651 Msa0669380:intron 50.0%
TGCCCAAAACTTGCAAGCAC+AGG - chr4_4:11053638-11053657 None:intergenic 50.0%
!! AGCTTCTGCTCTAGGGTTAC+AGG - chr4_4:11053802-11053821 None:intergenic 50.0%
TCTGAGGAGCTTCTGCTCTA+GGG - chr4_4:11053809-11053828 None:intergenic 50.0%
AATGGGAAACACACGTGGCA+AGG - chr4_4:11053956-11053975 None:intergenic 50.0%
CCCAATGGATAGTAGAGGTG+AGG - chr4_4:11054001-11054020 None:intergenic 50.0%
TTGTTCTTCCCTGGATCCCA+TGG + chr4_4:11054309-11054328 Msa0669380:intron 50.0%
GTGCACGTGTGCTCTTTGTA+AGG - chr4_4:11054422-11054441 None:intergenic 50.0%
TTGCAGTCACCACTCTACCT+TGG + chr4_4:11054892-11054911 Msa0669380:intron 50.0%
TGGGATGGAGCTATTTGACC+CGG - chr4_4:11055000-11055019 None:intergenic 50.0%
! GAGCGTGTCATTGTTGCTGA+AGG - chr4_4:11055152-11055171 None:intergenic 50.0%
GAGCGTCAAGAAGAGAGGAA+AGG - chr4_4:11055246-11055265 None:intergenic 50.0%
TCATGTAGGTCTGGTGGTCT+CGG + chr4_4:11055296-11055315 Msa0669380:intron 50.0%
TCGCCGTGGAACTATTGTCA+CGG + chr4_4:11055328-11055347 Msa0669380:intron 50.0%
TCTGTCATATCCGCCTTTGC+CGG - chr4_4:11055378-11055397 None:intergenic 50.0%
! GATCAATTTGCAAGCACCGC+CGG - chr4_4:11055477-11055496 None:intergenic 50.0%
CTGAACTGAATCCCCATCAG+AGG + chr4_4:11055577-11055596 Msa0669380:intron 50.0%
TCTAAAGGGGTGACTCAGGA+GGG - chr4_4:11055608-11055627 None:intergenic 50.0%
! TTCTAAAGGGGTGACTCAGG+AGG - chr4_4:11055609-11055628 None:intergenic 50.0%
!! TGGTTCTAAAGGGGTGACTC+AGG - chr4_4:11055612-11055631 None:intergenic 50.0%
ATGCATCTACAAATCGCCGG+TGG + chr4_4:11055750-11055769 Msa0669380:intron 50.0%
! TGAGAGTTGATCCGGTAGGT+CGG + chr4_4:11055776-11055795 Msa0669380:intron 50.0%
!! AGCTTCTGCTCTAGGGTTAC+AGG - chr4_4:11053802-11053821 None:intergenic 50.0%
TCTGAGGAGCTTCTGCTCTA+GGG - chr4_4:11053809-11053828 None:intergenic 50.0%
AATGGGAAACACACGTGGCA+AGG - chr4_4:11053956-11053975 None:intergenic 50.0%
CCCAATGGATAGTAGAGGTG+AGG - chr4_4:11054001-11054020 None:intergenic 50.0%
GTTGCTGCTCATGCAATCCA+TGG + chr4_4:11056648-11056667 Msa0669380:CDS 50.0%
TGGCTGCCCATTTGTTTCCA+TGG - chr4_4:11056668-11056687 None:intergenic 50.0%
ACAAATGGGCAGCCATTGCT+AGG + chr4_4:11056673-11056692 Msa0669380:CDS 50.0%
GCCTCAGAGTAGAATTCCAG+TGG - chr4_4:11056734-11056753 None:intergenic 50.0%
!! AATTCTACTCTGAGGCGTCG+AGG + chr4_4:11056738-11056757 Msa0669380:CDS 50.0%
CATGGGGGGAAATATCAGCT+TGG + chr4_4:11056806-11056825 Msa0669380:CDS 50.0%
! ACTGGCTTAAAAAGGGTCGG+TGG - chr4_4:11056990-11057009 None:intergenic 50.0%
TGGAGCTGATGTTGAAGGCT+GGG - chr4_4:11057057-11057076 None:intergenic 50.0%
TTGGAGCTGATGTTGAAGGC+TGG - chr4_4:11057058-11057077 None:intergenic 50.0%
GGTCTTGGAGCTGATGTTGA+AGG - chr4_4:11057062-11057081 None:intergenic 50.0%
CCTTGCATTGGAACAGGTCT+TGG - chr4_4:11057077-11057096 None:intergenic 50.0%
CCAAGACCTGTTCCAATGCA+AGG + chr4_4:11057074-11057093 Msa0669380:CDS 50.0%
!! CACACTGATTAGGCACTGAC+CGG - chr4_4:11057166-11057185 None:intergenic 50.0%
GTGCCTAATCAGTGTGGTCA+TGG + chr4_4:11057170-11057189 Msa0669380:CDS 50.0%
CATGGATGCTGCTCATCTCT+TGG + chr4_4:11057188-11057207 Msa0669380:CDS 50.0%
GGTTTAGCCGCATTAGGCGA+AGG + chr4_4:11049402-11049421 Msa0669380:CDS 55.0%
TTAGCCGCATTAGGCGAAGG+CGG + chr4_4:11049405-11049424 Msa0669380:CDS 55.0%
GCGTCTTCTTCAGGAGACCA+AGG - chr4_4:11049462-11049481 None:intergenic 55.0%
GCTGATTACACCATCGGAGC+CGG - chr4_4:11049572-11049591 None:intergenic 55.0%
! CGAGTTCGGGTTCTCGTGAA+TGG + chr4_4:11049751-11049770 Msa0669380:intron 55.0%
! TTGTGGTCAAATGTGGCGGG+TGG + chr4_4:11050111-11050130 Msa0669380:intron 55.0%
!! TGTGGTCAAATGTGGCGGGT+GGG + chr4_4:11050112-11050131 Msa0669380:intron 55.0%
GTTCGAGACTCGAGTCCACT+TGG - chr4_4:11050989-11051008 None:intergenic 55.0%
GTCTCGAACGTGAACCACTC+CGG + chr4_4:11051000-11051019 Msa0669380:intron 55.0%
CAACCATGAGCGGCCATTTG+GGG - chr4_4:11051131-11051150 None:intergenic 55.0%
TATCTGGCTAACTGCCCAGC+TGG + chr4_4:11052041-11052060 Msa0669380:intron 55.0%
TATCCCAGGAGTTGCTCCTC+TGG + chr4_4:11052479-11052498 Msa0669380:intron 55.0%
GATCCAGAGGAGCAACTCCT+GGG - chr4_4:11052485-11052504 None:intergenic 55.0%
AGATCCAGAGGAGCAACTCC+TGG - chr4_4:11052486-11052505 None:intergenic 55.0%
CTGAGAGGTAAGCAGTGCAC+TGG - chr4_4:11052668-11052687 None:intergenic 55.0%
! AGGGCAGCAATTTGATGGGC+TGG - chr4_4:11052767-11052786 None:intergenic 55.0%
GGTGAAGAAAGGGGAGGGAA+AGG + chr4_4:11053199-11053218 Msa0669380:intron 55.0%
AAGAAAGGGGAGGGAAAGGG+AGG + chr4_4:11053203-11053222 Msa0669380:intron 55.0%
AGAAAGGGGAGGGAAAGGGA+GGG + chr4_4:11053204-11053223 Msa0669380:intron 55.0%
CCCCCAAATTGGAGGGTTTC+TGG + chr4_4:11053396-11053415 Msa0669380:intron 55.0%
GGATAGTTCCCCACTTGGCA+AGG - chr4_4:11053450-11053469 None:intergenic 55.0%
GGGAAAGAGAAAGGGAAGGG+GGG - chr4_4:11053471-11053490 None:intergenic 55.0%
GGGGAAAGAGAAAGGGAAGG+GGG - chr4_4:11053472-11053491 None:intergenic 55.0%
CACAGGCACCATCTTGAGAG+GGG - chr4_4:11053621-11053640 None:intergenic 55.0%
GCACAGGCACCATCTTGAGA+GGG - chr4_4:11053622-11053641 None:intergenic 55.0%
AGCACAGGCACCATCTTGAG+AGG - chr4_4:11053623-11053642 None:intergenic 55.0%
! CTCTGAGGAGCTTCTGCTCT+AGG - chr4_4:11053810-11053829 None:intergenic 55.0%
GTGGCAAGGAGTGATTGGTG+AGG - chr4_4:11053942-11053961 None:intergenic 55.0%
CACACGTGGCAAGGAGTGAT+TGG - chr4_4:11053947-11053966 None:intergenic 55.0%
TCACCACTCTACCTTGGACC+AGG + chr4_4:11054898-11054917 Msa0669380:intron 55.0%
CGCCGTGGAACTATTGTCAC+GGG + chr4_4:11055329-11055348 Msa0669380:intron 55.0%
CGTTCACACCGAATCGGGTA+TGG - chr4_4:11055450-11055469 None:intergenic 55.0%
TCGGTGTGAACGATTTCCGG+CGG + chr4_4:11055458-11055477 Msa0669380:intron 55.0%
AGGAGGGCGAAACCTCTGAT+GGG - chr4_4:11055592-11055611 None:intergenic 55.0%
CATCTACAAATCGCCGGTGG+TGG + chr4_4:11055753-11055772 Msa0669380:intron 55.0%
GGATCAACTCTCACCACCAC+CGG - chr4_4:11055769-11055788 None:intergenic 55.0%
! GGTGGTGGTGAGAGTTGATC+CGG + chr4_4:11055768-11055787 Msa0669380:intron 55.0%
! GTGGTGAGAGTTGATCCGGT+AGG + chr4_4:11055772-11055791 Msa0669380:intron 55.0%
! CTCTGAGGAGCTTCTGCTCT+AGG - chr4_4:11053810-11053829 None:intergenic 55.0%
GTGGCAAGGAGTGATTGGTG+AGG - chr4_4:11053942-11053961 None:intergenic 55.0%
CACACGTGGCAAGGAGTGAT+TGG - chr4_4:11053947-11053966 None:intergenic 55.0%
TCCTGGCAGAAGCCTAGCAA+TGG - chr4_4:11056688-11056707 None:intergenic 55.0%
!! ACTCTGAGGCGTCGAGGAAT+TGG + chr4_4:11056744-11056763 Msa0669380:CDS 55.0%
!! CTCTGAGGCGTCGAGGAATT+GGG + chr4_4:11056745-11056764 Msa0669380:CDS 55.0%
!! TCTGAGGCGTCGAGGAATTG+GGG + chr4_4:11056746-11056765 Msa0669380:CDS 55.0%
TCGGTGGATCCCTGACTTCA+TGG - chr4_4:11056974-11056993 None:intergenic 55.0%
CGGTCAGTGCCTAATCAGTG+TGG + chr4_4:11057164-11057183 Msa0669380:CDS 55.0%
! TGATGGGTGATACTGCTGGC+AGG + chr4_4:11057360-11057379 Msa0669380:CDS 55.0%
GATGGGTGATACTGCTGGCA+GGG + chr4_4:11057361-11057380 Msa0669380:CDS 55.0%
ACAACCACCAACTCCCACGG+CGG + chr4_4:11049356-11049375 Msa0669380:CDS 60.0%
TTCGCCGCCTTCGCCTAATG+CGG - chr4_4:11049412-11049431 None:intergenic 60.0%
GAAGGCGGCGAAGGAAGTAG+CGG + chr4_4:11049420-11049439 Msa0669380:CDS 60.0%
GAAGATCGGGGAAGTCGTGC+CGG + chr4_4:11049550-11049569 Msa0669380:CDS 60.0%
!! GTGGTCAAATGTGGCGGGTG+GGG + chr4_4:11050113-11050132 Msa0669380:intron 60.0%
!! GATGGGCTGGATTGCCCAAG+TGG - chr4_4:11052754-11052773 None:intergenic 60.0%
AGGGGGGATAGTTCCCCACT+TGG - chr4_4:11053455-11053474 None:intergenic 60.0%
TTCCCTGGATCCCATGGCCT+GGG + chr4_4:11054315-11054334 Msa0669380:intron 60.0%
TTGACACTGGGCCTGGTCCA+AGG - chr4_4:11054912-11054931 None:intergenic 60.0%
TGTAGGTCTGGTGGTCTCGG+CGG + chr4_4:11055299-11055318 Msa0669380:intron 60.0%
! GTCACGGGTTGACCGAAGTC+CGG + chr4_4:11055344-11055363 Msa0669380:intron 60.0%
GGAGGGCGAAACCTCTGATG+GGG - chr4_4:11055591-11055610 None:intergenic 60.0%
CAGGAGGGCGAAACCTCTGA+TGG - chr4_4:11055593-11055612 None:intergenic 60.0%
GCCATTGCTAGGCTTCTGCC+AGG + chr4_4:11056684-11056703 Msa0669380:CDS 60.0%
!! CTGAGGCGTCGAGGAATTGG+GGG + chr4_4:11056747-11056766 Msa0669380:CDS 60.0%
CACGACGGAAGCGGTGACGA+AGG + chr4_4:11049381-11049400 Msa0669380:CDS 65.0%
GCATTAGGCGAAGGCGGCGA+AGG + chr4_4:11049411-11049430 Msa0669380:CDS 65.0%
AGGCCCCAAATGGCCGCTCA+TGG + chr4_4:11051125-11051144 Msa0669380:intron 65.0%
TCGGCTCCCATCCCATGCAC+AGG - chr4_4:11052274-11052293 None:intergenic 65.0%
CTTCCCTGGATCCCATGGCC+TGG + chr4_4:11054314-11054333 Msa0669380:intron 65.0%
TGCCCAGGCCATGGGATCCA+GGG - chr4_4:11054320-11054339 None:intergenic 65.0%
TTGCCCAGGCCATGGGATCC+AGG - chr4_4:11054321-11054340 None:intergenic 65.0%
GGGCCTGGTCCAAGGTAGAG+TGG - chr4_4:11054904-11054923 None:intergenic 65.0%
! ACGGGTTGACCGAAGTCCGG+AGG + chr4_4:11055347-11055366 Msa0669380:intron 65.0%
GGTTGACCGAAGTCCGGAGG+TGG + chr4_4:11055350-11055369 Msa0669380:intron 65.0%
CCGGAACCACCTCCGGACTT+CGG - chr4_4:11055359-11055378 None:intergenic 65.0%
CCGAAGTCCGGAGGTGGTTC+CGG + chr4_4:11055356-11055375 Msa0669380:intron 65.0%
TCCGGAGGTGGTTCCGGCAA+AGG + chr4_4:11055362-11055381 Msa0669380:intron 65.0%
GCCTTTGCCGGAACCACCTC+CGG - chr4_4:11055366-11055385 None:intergenic 65.0%
GGAGGTGGTTCCGGCAAAGG+CGG + chr4_4:11055365-11055384 Msa0669380:intron 65.0%
TGCACCGCCGTGGGAGTTGG+TGG - chr4_4:11049363-11049382 None:intergenic 70.0%
TCGTGCACCGCCGTGGGAGT+TGG - chr4_4:11049366-11049385 None:intergenic 70.0%
ACTCCCACGGCGGTGCACGA+CGG + chr4_4:11049366-11049385 Msa0669380:CDS 70.0%
CTTCCGTCGTGCACCGCCGT+GGG - chr4_4:11049372-11049391 None:intergenic 70.0%
ACGGCGGTGCACGACGGAAG+CGG + chr4_4:11049372-11049391 Msa0669380:CDS 70.0%
!! GGAAGTCGTGCCGGCTCCGA+TGG + chr4_4:11049559-11049578 Msa0669380:CDS 70.0%
AGGTCTGGTGGTCTCGGCGG+CGG + chr4_4:11055302-11055321 Msa0669380:intron 70.0%
GCTTCCGTCGTGCACCGCCG+TGG - chr4_4:11049373-11049392 None:intergenic 75.0%
!! GTGGCGGGTGGGGCCTCACT+TGG + chr4_4:11050123-11050142 Msa0669380:intron 75.0%
! CTCGGCGGCGGTGCTCGCCG+TGG + chr4_4:11055314-11055333 Msa0669380:intron 85.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 11049342 11057628 11049342 ID=Msa0669380;Name=Msa0669380
chr4_4 mRNA 11049342 11057628 11049342 ID=Msa0669380-mRNA-1;Parent=Msa0669380;Name=Msa0669380-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0.5|1|0|1|2|234|335
chr4_4 exon 11049342 11049582 11049342 ID=Msa0669380-mRNA-1:exon:3279;Parent=Msa0669380-mRNA-1
chr4_4 exon 11056628 11057628 11056628 ID=Msa0669380-mRNA-1:exon:3280;Parent=Msa0669380-mRNA-1
chr4_4 CDS 11049342 11049582 11049342 ID=Msa0669380-mRNA-1:cds;Parent=Msa0669380-mRNA-1
chr4_4 CDS 11056628 11057394 11056628 ID=Msa0669380-mRNA-1:cds;Parent=Msa0669380-mRNA-1
chr4_4 three_prime_UTR 11057395 11057628 11057395 ID=Msa0669380-mRNA-1:three_prime_utr;Parent=Msa0669380-mRNA-1
Gene Sequence

>Msa0669380

ATGGAACCAGAACAACAACCACCAACTCCCACGGCGGTGCACGACGGAAGCGGTGACGAAGGTTTAGCCGCATTAGGCGAAGGCGGCGAAGGAAGTAGCGGTAGCAAAGTGAAAGGACCTTGGTCTCCTGAAGAAGACGCCATTCTCAGTCGTCTTGTTAGTCAGTTCGGTGCTAGAAACTGGAGTTTGATTGCTCGTGGAATTTCTGGAAGATCGGGGAAGTCGTGCCGGCTCCGATGGTATGAGGAAGACCGGATCATAGTTGCTGCTCATGCAATCCATGGAAACAAATGGGCAGCCATTGCTAGGCTTCTGCCAGGAAGAACAGATAATGCCATTAAGAACCACTGGAATTCTACTCTGAGGCGTCGAGGAATTGGGGGAGTTGAACATGATAATACTAAGTTAGAATCTAGTAACATGGGGGGAAATATCAGCTTGGAGAAAGCCAAAGCATCATCTGAAGAAACTCTATCATGTGGAGATGTTAATTCTTTGAAATCCTCAGAAGGAAGAGATGTTAGTTCTATGGAGATTGTCGATGATAAAAATGAAGACAAAGCAAGGACTGATGTTCAATTATACCATGAAGTCAGGGATCCACCGACCCTTTTTAAGCCAGTAGCACGTGTAAGTGCTTTTAATGCGTATAACGCTTTCAATGGTTCCCAGCCTTCAACATCAGCTCCAAGACCTGTTCCAATGCAAGGACCTATTTTACATTCACCAAAATCAGATGCGGAAATTTGTAAAATGCTTAACAGAACTATTGTCGACCGGTCAGTGCCTAATCAGTGTGGTCATGGATGCTGCTCATCTCTTGGTAACAACTCCAAAAGCTCTTTGTTGGGACCAGACTTCATTGAATATTCAGAACCTCAATCTTTCACAAGTTTTGAGTTGGCTGCAATAGCTACAGACATTAGTAACCTTGCTTGGCTTAAAAGTGGATTGGAGAACAGCAGCGTCAAAATGATGGGTGATACTGCTGGCAGGGTTAATATCTAA
Protein sequence

>Msa0669380

MEPEQQPPTPTAVHDGSGDEGLAALGEGGEGSSGSKVKGPWSPEEDAILSRLVSQFGARNWSLIARGISGRSGKSCRLRWYEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGIGGVEHDNTKLESSNMGGNISLEKAKASSEETLSCGDVNSLKSSEGRDVSSMEIVDDKNEDKARTDVQLYHEVRDPPTLFKPVARVSAFNAYNAFNGSQPSTSAPRPVPMQGPILHSPKSDAEICKMLNRTIVDRSVPNQCGHGCCSSLGNNSKSSLLGPDFIEYSEPQSFTSFELAAIATDISNLAWLKSGLENSSVKMMGDTAGRVNI*