Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0677430 | XP_039688675.1 | 82.425 | 569 | 56 | 10 | 1 | 547 | 1 | 547 | 0.0 | 830 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0677430 | sp|Q9SJJ3|BLH8_ARATH | 28.960 | 625 | 299 | 23 | 1 | 575 | 4 | 533 | 4.62e-48 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0677430 | A0A396I7I3 | 82.425 | 569 | 56 | 10 | 1 | 547 | 1 | 547 | 0.0 | 830 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0642820 | Msa0677430 | 0.813080 | 3.066679e-51 | -8.615850e-47 |
| Msa0546790 | Msa0677430 | 0.848752 | 5.016053e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0677430 | MtrunA17_Chr4g0028701 | 82.425 | 569 | 56 | 10 | 1 | 547 | 1 | 547 | 0.0 | 830 |
| Msa0677430 | MtrunA17_Chr2g0327021 | 37.455 | 558 | 229 | 23 | 48 | 538 | 3 | 507 | 5.22e-81 | 266 |
| Msa0677430 | MtrunA17_Chr7g0240371 | 36.825 | 315 | 121 | 7 | 238 | 538 | 123 | 373 | 2.02e-53 | 190 |
| Msa0677430 | MtrunA17_Chr4g0008591 | 36.774 | 310 | 110 | 7 | 245 | 538 | 189 | 428 | 5.96e-49 | 179 |
| Msa0677430 | MtrunA17_Chr5g0403251 | 33.333 | 342 | 154 | 10 | 248 | 566 | 330 | 620 | 3.18e-42 | 162 |
| Msa0677430 | MtrunA17_Chr8g0387321 | 34.393 | 346 | 158 | 8 | 232 | 564 | 170 | 459 | 6.21e-42 | 160 |
| Msa0677430 | MtrunA17_Chr1g0177751 | 44.809 | 183 | 82 | 3 | 345 | 527 | 227 | 390 | 3.92e-41 | 158 |
| Msa0677430 | MtrunA17_Chr1g0155681 | 35.235 | 298 | 127 | 8 | 255 | 535 | 173 | 421 | 4.01e-40 | 154 |
| Msa0677430 | MtrunA17_Chr7g0267481 | 31.633 | 392 | 188 | 11 | 157 | 535 | 99 | 423 | 7.61e-40 | 154 |
| Msa0677430 | MtrunA17_Chr4g0025521 | 31.805 | 349 | 146 | 9 | 252 | 576 | 217 | 497 | 1.77e-38 | 150 |
| Msa0677430 | MtrunA17_Chr3g0141941 | 32.353 | 340 | 157 | 10 | 248 | 562 | 158 | 449 | 2.20e-36 | 142 |
| Msa0677430 | MtrunA17_Chr3g0141931 | 30.816 | 331 | 161 | 8 | 249 | 560 | 162 | 443 | 6.85e-35 | 137 |
| Msa0677430 | MtrunA17_Chr1g0151681 | 25.058 | 431 | 224 | 19 | 148 | 535 | 115 | 489 | 8.41e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0677430 | AT2G27990.1 | 28.960 | 625 | 299 | 23 | 1 | 575 | 4 | 533 | 4.69e-49 | 179 |
| Msa0677430 | AT2G27990.2 | 30.812 | 542 | 247 | 21 | 1 | 509 | 4 | 450 | 1.31e-48 | 176 |
| Msa0677430 | AT1G19700.1 | 30.979 | 439 | 192 | 15 | 147 | 535 | 39 | 416 | 1.38e-42 | 160 |
| Msa0677430 | AT1G19700.3 | 30.979 | 439 | 192 | 15 | 147 | 535 | 39 | 416 | 1.38e-42 | 160 |
| Msa0677430 | AT1G19700.5 | 30.979 | 439 | 192 | 15 | 147 | 535 | 39 | 416 | 1.38e-42 | 160 |
| Msa0677430 | AT1G19700.4 | 30.979 | 439 | 192 | 15 | 147 | 535 | 39 | 416 | 1.38e-42 | 160 |
| Msa0677430 | AT1G19700.2 | 30.979 | 439 | 192 | 15 | 147 | 535 | 39 | 416 | 1.38e-42 | 160 |
| Msa0677430 | AT1G75410.3 | 31.714 | 391 | 183 | 10 | 160 | 523 | 53 | 386 | 1.97e-42 | 157 |
| Msa0677430 | AT1G75410.1 | 30.769 | 416 | 191 | 11 | 160 | 535 | 53 | 411 | 2.47e-42 | 160 |
| Msa0677430 | AT1G75410.2 | 30.769 | 416 | 191 | 11 | 160 | 535 | 53 | 411 | 2.47e-42 | 160 |
| Msa0677430 | AT2G35940.3 | 45.055 | 182 | 86 | 3 | 346 | 527 | 262 | 429 | 3.40e-41 | 159 |
| Msa0677430 | AT2G35940.1 | 45.055 | 182 | 86 | 3 | 346 | 527 | 262 | 429 | 3.40e-41 | 159 |
| Msa0677430 | AT2G35940.2 | 45.055 | 182 | 86 | 3 | 346 | 527 | 262 | 429 | 3.40e-41 | 159 |
| Msa0677430 | AT4G36870.2 | 37.374 | 297 | 128 | 9 | 252 | 535 | 312 | 563 | 1.73e-40 | 157 |
| Msa0677430 | AT4G36870.1 | 37.374 | 297 | 128 | 9 | 252 | 535 | 312 | 563 | 1.73e-40 | 157 |
| Msa0677430 | AT4G36870.4 | 38.406 | 276 | 125 | 8 | 252 | 527 | 312 | 542 | 1.75e-40 | 155 |
| Msa0677430 | AT4G36870.3 | 38.406 | 276 | 125 | 8 | 252 | 527 | 312 | 542 | 3.25e-40 | 154 |
| Msa0677430 | AT4G34610.2 | 33.887 | 301 | 119 | 8 | 253 | 535 | 141 | 379 | 5.09e-39 | 150 |
| Msa0677430 | AT4G34610.4 | 33.887 | 301 | 119 | 8 | 253 | 535 | 141 | 379 | 5.09e-39 | 150 |
| Msa0677430 | AT4G34610.3 | 33.887 | 301 | 119 | 8 | 253 | 535 | 141 | 379 | 5.09e-39 | 150 |
| Msa0677430 | AT4G34610.1 | 33.887 | 301 | 119 | 8 | 253 | 535 | 141 | 379 | 5.09e-39 | 150 |
| Msa0677430 | AT2G16400.1 | 37.129 | 202 | 97 | 3 | 347 | 535 | 166 | 350 | 1.16e-36 | 143 |
| Msa0677430 | AT5G02030.1 | 38.835 | 206 | 77 | 4 | 359 | 538 | 234 | 416 | 3.49e-35 | 140 |
| Msa0677430 | AT2G27220.1 | 31.148 | 305 | 113 | 9 | 244 | 535 | 73 | 293 | 9.07e-32 | 128 |
| Msa0677430 | AT2G27220.3 | 31.148 | 305 | 113 | 9 | 244 | 535 | 73 | 293 | 9.07e-32 | 128 |
| Msa0677430 | AT5G41410.1 | 38.500 | 200 | 93 | 5 | 351 | 535 | 272 | 456 | 4.73e-31 | 128 |
| Msa0677430 | AT2G27220.2 | 30.000 | 310 | 128 | 9 | 244 | 535 | 73 | 311 | 3.56e-29 | 120 |
| Msa0677430 | AT1G75430.1 | 33.636 | 220 | 107 | 7 | 336 | 535 | 67 | 267 | 2.03e-25 | 107 |
| Msa0677430 | AT1G75430.2 | 33.641 | 217 | 118 | 6 | 321 | 530 | 52 | 249 | 2.09e-25 | 106 |
| Msa0677430 | AT4G32980.1 | 22.346 | 358 | 189 | 10 | 193 | 535 | 154 | 437 | 3.26e-13 | 72.4 |
| Msa0677430 | AT4G32980.2 | 22.346 | 358 | 189 | 10 | 193 | 535 | 154 | 437 | 3.26e-13 | 72.4 |
Find 133 sgRNAs with CRISPR-Local
Find 559 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTCGAGCGTTAAGAATT+TGG | 0.167949 | 4_4:+30984840 | None:intergenic |
| ATCCTCTACAACCGGCTTTA+TGG | 0.176006 | 4_4:+30984863 | None:intergenic |
| ATCTTTCAGGTAACCCTCTC+TGG | 0.199963 | 4_4:+30978661 | None:intergenic |
| TATATATAACACAGGTTAAT+TGG | 0.214505 | 4_4:-30984920 | Msa0677430:five_prime_UTR |
| AAGTATAGTAGTTGGAAATT+TGG | 0.228982 | 4_4:-30984601 | Msa0677430:five_prime_UTR |
| AGAATTGCCACTGATCTTTC+AGG | 0.234528 | 4_4:+30978648 | None:intergenic |
| GGTCCACTTGGACCATTTAC+TGG | 0.239951 | 4_4:-30983857 | Msa0677430:CDS |
| CTACTAGTAGTAGTGGTTTA+AGG | 0.267636 | 4_4:-30983886 | Msa0677430:CDS |
| TCATGAAATACAGGTATAAT+AGG | 0.277260 | 4_4:+30984112 | None:intergenic |
| AATTGTTCAATGTTGTTGTT+AGG | 0.282548 | 4_4:+30984505 | None:intergenic |
| GTAATTGAGCCTTATTCTTT+TGG | 0.283413 | 4_4:+30983522 | None:intergenic |
| TAATGAATCATCATGGCATT+TGG | 0.286737 | 4_4:-30984156 | Msa0677430:CDS |
| AACCAACAACACTAATTTCT+AGG | 0.290192 | 4_4:-30983916 | Msa0677430:CDS |
| CCACCATTTGCATTTGTTGA+TGG | 0.290812 | 4_4:+30979000 | None:intergenic |
| GAGTTCACAGAATGTATAAA+TGG | 0.293496 | 4_4:-30976415 | Msa0677430:CDS |
| TGCATGTTGCACAACAAATT+AGG | 0.293946 | 4_4:-30984561 | Msa0677430:CDS |
| TGTTAGGAAACACTTGATTC+TGG | 0.295154 | 4_4:+30984521 | None:intergenic |
| TCCCTAGAAATTAGTGTTGT+TGG | 0.305981 | 4_4:+30983914 | None:intergenic |
| GTTGTTGGTTGTTCTAGTTC+TGG | 0.313916 | 4_4:-30983704 | Msa0677430:CDS |
| AGTGGTGGTGATGGAGGAAT+TGG | 0.314187 | 4_4:-30983590 | Msa0677430:CDS |
| CGAAGATGAAGTTGAGGGTT+TGG | 0.326161 | 4_4:+30983970 | None:intergenic |
| AAACTTACATGTCAAGTATT+AGG | 0.326456 | 4_4:-30978861 | Msa0677430:CDS |
| AACCTCAACAACAGCATGTT+TGG | 0.326715 | 4_4:-30978689 | Msa0677430:CDS |
| AATGAATCATCATGGCATTT+GGG | 0.328650 | 4_4:-30984155 | Msa0677430:CDS |
| ACCAGAGTGCCAAAAGAATA+AGG | 0.328721 | 4_4:-30983531 | Msa0677430:CDS |
| TCCAAGTTATTGAAGCTTGC+AGG | 0.339471 | 4_4:+30984457 | None:intergenic |
| ATGAAAATCAAGCAAATTTG+TGG | 0.348791 | 4_4:-30984093 | Msa0677430:CDS |
| GCAAAAGGTAGTAGTAATTC+AGG | 0.350990 | 4_4:-30983656 | Msa0677430:CDS |
| AGGCTAGCAAACCAAGAGTT+TGG | 0.360875 | 4_4:-30976565 | Msa0677430:CDS |
| AGCTTGCAGGTTGTGGTGTT+TGG | 0.360890 | 4_4:+30984470 | None:intergenic |
| TGTTTGTGTGGAGGATAGAT+AGG | 0.365834 | 4_4:+30985235 | None:intergenic |
| ATTTCCAACTACTATACTTA+AGG | 0.379280 | 4_4:+30984605 | None:intergenic |
| AACTTCTACCTTTGATTCTC+CGG | 0.385907 | 4_4:+30984801 | None:intergenic |
| TTCACATAGTACTTCAGAAA+TGG | 0.389982 | 4_4:-30984185 | Msa0677430:CDS |
| AGCTACACCATACATTTCAT+TGG | 0.390026 | 4_4:-30978943 | Msa0677430:CDS |
| GCAAAGATTTCCAGCAACTT+TGG | 0.391744 | 4_4:-30976437 | Msa0677430:CDS |
| TCCTTTACACAGAAACCCTT+TGG | 0.393027 | 4_4:-30984329 | Msa0677430:CDS |
| GGTTCATCTTCAATGTTGTA+TGG | 0.394873 | 4_4:-30983632 | Msa0677430:CDS |
| AGCTTACAAAAGAACAAATC+TGG | 0.398649 | 4_4:-30978741 | Msa0677430:CDS |
| TGTGGAGGATAGATAGGAAA+TGG | 0.402084 | 4_4:+30985241 | None:intergenic |
| AGCTTCACCTTCCAAACTCT+TGG | 0.403239 | 4_4:+30976554 | None:intergenic |
| TGAAGTACTATGTGAACTAA+TGG | 0.403893 | 4_4:+30984192 | None:intergenic |
| TCTGTGAACTCCAAAGTTGC+TGG | 0.411267 | 4_4:+30976427 | None:intergenic |
| GAATTTGGATCCTCTACAAC+CGG | 0.414224 | 4_4:+30984855 | None:intergenic |
| TCCAAAGGGTTTCTGTGTAA+AGG | 0.420893 | 4_4:+30984328 | None:intergenic |
| AAAGAGAATAGTGGTGGTGA+TGG | 0.422004 | 4_4:-30983599 | Msa0677430:CDS |
| CTCATGTGCTACATCATTTG+CGG | 0.423095 | 4_4:+30976460 | None:intergenic |
| GCAAATTTGTGGACAAATAG+AGG | 0.424244 | 4_4:-30984082 | Msa0677430:CDS |
| CATCATGGCATTTGGGGAGG+TGG | 0.426888 | 4_4:-30984148 | Msa0677430:CDS |
| AGGCAAGAAAGAGTTGGAAT+TGG | 0.426992 | 4_4:+30984240 | None:intergenic |
| ATTGTTGCATAGCCAGTAAA+TGG | 0.437686 | 4_4:+30983845 | None:intergenic |
| CAGTGGCAATTCTTAAAGCT+TGG | 0.440006 | 4_4:-30978638 | Msa0677430:CDS |
| ACCTGCAAGCTTCAATAACT+TGG | 0.447914 | 4_4:-30984458 | Msa0677430:CDS |
| ACATCTCTTGAAACCCATCT+TGG | 0.448290 | 4_4:+30983725 | None:intergenic |
| TCATCATTTGAGTCAGTAGC+TGG | 0.449229 | 4_4:-30978975 | Msa0677430:CDS |
| CAAAAGAACAAATCTGGAGC+TGG | 0.451287 | 4_4:-30978735 | Msa0677430:CDS |
| TTAAGGAATGTTGGTCCACT+TGG | 0.451509 | 4_4:-30983869 | Msa0677430:CDS |
| GGATAGATAGGAAATGGAAG+TGG | 0.461464 | 4_4:+30985247 | None:intergenic |
| TTACTGCTACTTGTGGTTGT+TGG | 0.462089 | 4_4:+30978819 | None:intergenic |
| ATCATCAAGCATGTTGTTGT+TGG | 0.462163 | 4_4:+30984414 | None:intergenic |
| TCTTTCAGGTAACCCTCTCT+GGG | 0.462284 | 4_4:+30978662 | None:intergenic |
| GTTTCTGTGTAAAGGATTTG+AGG | 0.473684 | 4_4:+30984336 | None:intergenic |
| CTCCAAACATGCTGTTGTTG+AGG | 0.475472 | 4_4:+30978687 | None:intergenic |
| TAATAATAATGTTCCAAGAT+GGG | 0.485516 | 4_4:-30983738 | Msa0677430:CDS |
| GAGAATAGTGGTGGTGATGG+AGG | 0.486943 | 4_4:-30983596 | Msa0677430:CDS |
| TTTCTGTGTAAAGGATTTGA+GGG | 0.495400 | 4_4:+30984337 | None:intergenic |
| AAGGCCTTAAGTATAGTAGT+TGG | 0.501764 | 4_4:-30984609 | Msa0677430:five_prime_UTR |
| GATAGATAGGAAATGGAAGT+GGG | 0.504038 | 4_4:+30985248 | None:intergenic |
| AACTTCTTAGATTACCTTGG+TGG | 0.504719 | 4_4:+30985200 | None:intergenic |
| GAAAGTGGAGTTTCTGCAAA+AGG | 0.505107 | 4_4:-30983671 | Msa0677430:CDS |
| TCAAAAGAGAAAGAGAATAG+TGG | 0.510959 | 4_4:-30983608 | Msa0677430:CDS |
| GTAGTTGGAAATTTGGAATG+AGG | 0.511929 | 4_4:-30984594 | Msa0677430:exon |
| AATGTATAAATGGTTTGTAC+AGG | 0.512801 | 4_4:-30976405 | Msa0677430:CDS |
| ACCAACAACACTAATTTCTA+GGG | 0.513111 | 4_4:-30983915 | Msa0677430:CDS |
| GTTCATGACAATATTCCAAA+GGG | 0.513243 | 4_4:+30984314 | None:intergenic |
| TTATTGAAGCTTGCAGGTTG+TGG | 0.513722 | 4_4:+30984463 | None:intergenic |
| GTGGTGGTGATGGAGGAATT+GGG | 0.517374 | 4_4:-30983589 | Msa0677430:CDS |
| ATCATGGCATTTGGGGAGGT+GGG | 0.517411 | 4_4:-30984147 | Msa0677430:CDS |
| AAGATAGATTCTTGTTTGTG+TGG | 0.518155 | 4_4:+30985223 | None:intergenic |
| ATAATAATAATGTTCCAAGA+TGG | 0.522752 | 4_4:-30983739 | Msa0677430:CDS |
| TGTGCAACATGCAATTGATC+TGG | 0.523813 | 4_4:+30984571 | None:intergenic |
| ATACCATCAACAAATGCAAA+TGG | 0.525199 | 4_4:-30979003 | Msa0677430:CDS |
| AAATTCGAAGATGAAGTTGA+GGG | 0.527318 | 4_4:+30983965 | None:intergenic |
| ATCAGTAGGCAAGAAAGAGT+TGG | 0.531884 | 4_4:+30984234 | None:intergenic |
| TCTGGTGGTGTTGATGAAAG+TGG | 0.532409 | 4_4:-30983686 | Msa0677430:CDS |
| AGTAGTGGTTTAAGGAATGT+TGG | 0.534594 | 4_4:-30983878 | Msa0677430:CDS |
| GCTTCTTTAATGAATCATCA+TGG | 0.540035 | 4_4:-30984163 | Msa0677430:CDS |
| TATAACACAGGTTAATTGGA+AGG | 0.543045 | 4_4:-30984916 | Msa0677430:five_prime_UTR |
| TGGGTTTCAAGAGATGTTGT+TGG | 0.544401 | 4_4:-30983719 | Msa0677430:CDS |
| AAAATTCGAAGATGAAGTTG+AGG | 0.545913 | 4_4:+30983964 | None:intergenic |
| TAGCTGAATCAAGTAACAGT+AGG | 0.546492 | 4_4:-30984291 | Msa0677430:CDS |
| TTTACTGATTACAATCCTCA+AGG | 0.552560 | 4_4:-30984025 | Msa0677430:CDS |
| TACCATAAAGCCGGTTGTAG+AGG | 0.555702 | 4_4:-30984865 | Msa0677430:five_prime_UTR |
| CTCAACAACAGCATGTTTGG+AGG | 0.557669 | 4_4:-30978686 | Msa0677430:CDS |
| AAAAGAACAAATCTGGAGCT+GGG | 0.563662 | 4_4:-30978734 | Msa0677430:CDS |
| GACTGTACTACTAGTAGTAG+TGG | 0.567360 | 4_4:-30983893 | Msa0677430:CDS |
| TTTGATTACCGGAGAATCAA+AGG | 0.569161 | 4_4:-30984809 | Msa0677430:intron |
| TTTAGAGCCAATGAAATGTA+TGG | 0.569263 | 4_4:+30978936 | None:intergenic |
| ATAGATTCTTGTTTGTGTGG+AGG | 0.572433 | 4_4:+30985226 | None:intergenic |
| CTTGATGATCATGATCAAGA+AGG | 0.572908 | 4_4:-30984400 | Msa0677430:CDS |
| AGCTGAATCAAGTAACAGTA+GGG | 0.574347 | 4_4:-30984290 | Msa0677430:CDS |
| CGCAAATGATGTAGCACATG+AGG | 0.578549 | 4_4:-30976459 | Msa0677430:CDS |
| AACCTGTGTTATATATATGT+CGG | 0.583230 | 4_4:+30984926 | None:intergenic |
| TAGCAAACCAAGAGTTTGGA+AGG | 0.583414 | 4_4:-30976561 | Msa0677430:CDS |
| ATAATAATATGACAAGGCTA+AGG | 0.584622 | 4_4:-30978779 | Msa0677430:CDS |
| ATGTTTGGAGGCCCCAGAGA+GGG | 0.586157 | 4_4:-30978674 | Msa0677430:CDS |
| AGATAGGAAATGGAAGTGGG+AGG | 0.589107 | 4_4:+30985251 | None:intergenic |
| AGTTCATGACAATATTCCAA+AGG | 0.591381 | 4_4:+30984313 | None:intergenic |
| AAATTTATTACTGCTACTTG+TGG | 0.591603 | 4_4:+30978812 | None:intergenic |
| GAAGACTTGAAAATATCAGT+AGG | 0.592588 | 4_4:+30984220 | None:intergenic |
| GTTGGTTGTTCTAGTTCTGG+TGG | 0.593108 | 4_4:-30983701 | Msa0677430:CDS |
| AAATTAGGAGAGACAAATTG+AGG | 0.599560 | 4_4:-30984546 | Msa0677430:CDS |
| ATGAATCATCATGGCATTTG+GGG | 0.611041 | 4_4:-30984154 | Msa0677430:CDS |
| TCTTCTAACAACTCTTGACA+AGG | 0.615926 | 4_4:+30983797 | None:intergenic |
| AATTGATATAGGTTACAAGA+AGG | 0.616269 | 4_4:-30979034 | Msa0677430:intron |
| AAAGAGAAAGAGAATAGTGG+TGG | 0.617298 | 4_4:-30983605 | Msa0677430:CDS |
| GCTAGACGATACCATAAAGC+CGG | 0.621474 | 4_4:-30984874 | Msa0677430:five_prime_UTR |
| CCATCAACAAATGCAAATGG+TGG | 0.649972 | 4_4:-30979000 | Msa0677430:CDS |
| AGCTTGAGAAGAGTCAATTG+AGG | 0.651311 | 4_4:-30976535 | Msa0677430:CDS |
| TAGCCAGTAAATGGTCCAAG+TGG | 0.657116 | 4_4:+30983854 | None:intergenic |
| AATCATCATGGCATTTGGGG+AGG | 0.668916 | 4_4:-30984151 | Msa0677430:CDS |
| TACCGACATATATATAACAC+AGG | 0.669110 | 4_4:-30984928 | Msa0677430:five_prime_UTR |
| AAGTGGGAGGAAGCAAAGCA+AGG | 0.670551 | 4_4:+30985264 | None:intergenic |
| ATTACTGTACATGCACGATG+AGG | 0.677646 | 4_4:-30983504 | Msa0677430:intron |
| AGGGTTACCTGAAAGATCAG+TGG | 0.678566 | 4_4:-30978655 | Msa0677430:CDS |
| AGTGACAAGGATAAACCTTG+AGG | 0.680284 | 4_4:+30984010 | None:intergenic |
| AAAGGTAGTAGTAATTCAGG+TGG | 0.682385 | 4_4:-30983653 | Msa0677430:CDS |
| CAAGAATCTATCTTCCACCA+AGG | 0.683473 | 4_4:-30985214 | Msa0677430:intron |
| TACATGTCAAGTATTAGGAG+AGG | 0.684996 | 4_4:-30978856 | Msa0677430:CDS |
| CATGTTTGGAGGCCCCAGAG+AGG | 0.701806 | 4_4:-30978675 | Msa0677430:CDS |
| TGAATTTGATGAAAGTGACA+AGG | 0.713273 | 4_4:+30983997 | None:intergenic |
| GTAATAATAATAATATGACA+AGG | 0.717709 | 4_4:-30978785 | Msa0677430:CDS |
| CTTTCAGGTAACCCTCTCTG+GGG | 0.726576 | 4_4:+30978663 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATAATAATAATATTA+TGG | + | chr4_4:30977005-30977024 | None:intergenic | 0.0% |
| !!! | TTTATATTATTATTTTAATT+AGG | + | chr4_4:30984158-30984177 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAATTGATAGA+AGG | + | chr4_4:30976605-30976624 | None:intergenic | 10.0% |
| !! | AAAATCATACATAAAATAAA+GGG | + | chr4_4:30978444-30978463 | None:intergenic | 10.0% |
| !! | TAAAATCATACATAAAATAA+AGG | + | chr4_4:30978445-30978464 | None:intergenic | 10.0% |
| !! | ATAAAAAATTATATATTGGT+AGG | + | chr4_4:30978860-30978879 | None:intergenic | 10.0% |
| !!! | ACCAATATATAATTTTTTAT+TGG | - | chr4_4:30978860-30978879 | Msa0677430:CDS | 10.0% |
| !! | TCCAATAAAAAATTATATAT+TGG | + | chr4_4:30978864-30978883 | None:intergenic | 10.0% |
| !!! | TCAGATTTTTATTTATTTTT+AGG | - | chr4_4:30978942-30978961 | Msa0677430:CDS | 10.0% |
| !!! | TTTTATTTATTTTTAGGTTT+TGG | - | chr4_4:30978948-30978967 | Msa0677430:CDS | 10.0% |
| !!! | TTTATTTATTTTTAGGTTTT+GGG | - | chr4_4:30978949-30978968 | Msa0677430:CDS | 10.0% |
| !!! | ATGTTAAATAAAAATGTTTT+TGG | - | chr4_4:30979877-30979896 | Msa0677430:intron | 10.0% |
| !!! | AGTTTAAATTTCAATTTTTT+AGG | + | chr4_4:30979990-30980009 | None:intergenic | 10.0% |
| !! | TTATTTATAAATCATGTTAA+TGG | - | chr4_4:30981446-30981465 | Msa0677430:intron | 10.0% |
| !! | TTACTTTAATATAATAATTG+TGG | - | chr4_4:30981671-30981690 | Msa0677430:intron | 10.0% |
| !!! | AATTAGTTTAATATTGTTTA+AGG | - | chr4_4:30982193-30982212 | Msa0677430:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr4_4:30983308-30983327 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr4_4:30983309-30983328 | None:intergenic | 10.0% |
| !!! | GTTTTTTTTTTTTGAAAATA+TGG | + | chr4_4:30983430-30983449 | None:intergenic | 10.0% |
| !!! | TTTTTTATTCTATCTTTTTA+CGG | - | chr4_4:30984188-30984207 | Msa0677430:CDS | 10.0% |
| !!! | TAAAGAATATTTCTTCTTTT+AGG | + | chr4_4:30978303-30978322 | None:intergenic | 15.0% |
| !! | CAATAATAGAAATAGTTTAT+TGG | + | chr4_4:30978382-30978401 | None:intergenic | 15.0% |
| !! | ACTGTGTTAATTTAAAAAAA+AGG | - | chr4_4:30978540-30978559 | Msa0677430:intron | 15.0% |
| !!! | TTATTTATTTTTAGGTTTTG+GGG | - | chr4_4:30978950-30978969 | Msa0677430:CDS | 15.0% |
| !! | ATAAAAAAACATATTCGATA+TGG | + | chr4_4:30979117-30979136 | None:intergenic | 15.0% |
| !! | AAAATAAGGACAAAATAAAT+TGG | - | chr4_4:30979335-30979354 | Msa0677430:intron | 15.0% |
| !!! | TCTAACATTTACTATTTTAT+TGG | - | chr4_4:30979538-30979557 | Msa0677430:intron | 15.0% |
| !!! | CTAACATTTACTATTTTATT+GGG | - | chr4_4:30979539-30979558 | Msa0677430:intron | 15.0% |
| !! | ATATGATGAAATATAAACAA+AGG | + | chr4_4:30979725-30979744 | None:intergenic | 15.0% |
| !! | TTGTTTATATTTCATCATAT+AGG | - | chr4_4:30979725-30979744 | Msa0677430:intron | 15.0% |
| !! | TGTTTATATTTCATCATATA+GGG | - | chr4_4:30979726-30979745 | Msa0677430:intron | 15.0% |
| !! | AATGATATTCTATACTAATT+TGG | + | chr4_4:30979839-30979858 | None:intergenic | 15.0% |
| !! | GAAAATTTAGAAATCAAATT+GGG | + | chr4_4:30979948-30979967 | None:intergenic | 15.0% |
| !! | AGAAAATTTAGAAATCAAAT+TGG | + | chr4_4:30979949-30979968 | None:intergenic | 15.0% |
| !!! | ATGTCAGTTTATTTTTTTAT+CGG | - | chr4_4:30980246-30980265 | Msa0677430:intron | 15.0% |
| !! | GAATAAAGATAAAACAAATT+AGG | + | chr4_4:30980447-30980466 | None:intergenic | 15.0% |
| !!! | TTAACTAAGATTTTGTAATA+CGG | - | chr4_4:30981231-30981250 | Msa0677430:intron | 15.0% |
| !! | TAACATGATTTATAAATAAC+CGG | + | chr4_4:30981445-30981464 | None:intergenic | 15.0% |
| !!! | AAAACTCTAAAAAAGTTTTT+AGG | - | chr4_4:30981553-30981572 | Msa0677430:intron | 15.0% |
| !!! | AAACTCTAAAAAAGTTTTTA+GGG | - | chr4_4:30981554-30981573 | Msa0677430:intron | 15.0% |
| !! | TAGAATATACTATATATAGT+TGG | - | chr4_4:30982610-30982629 | Msa0677430:intron | 15.0% |
| !! | TAATAATGTTGAATTGATAT+AGG | - | chr4_4:30982647-30982666 | Msa0677430:intron | 15.0% |
| !! | GTAATAATAATAATATGACA+AGG | - | chr4_4:30982907-30982926 | Msa0677430:intron | 15.0% |
| !! | TAATTAGAGTTATATTGTAT+TGG | + | chr4_4:30983244-30983263 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr4_4:30983307-30983326 | None:intergenic | 15.0% |
| !!! | TTTTTATTCTATCTTTTTAC+GGG | - | chr4_4:30984189-30984208 | Msa0677430:CDS | 15.0% |
| !!! | ATTTATCGAGTTATTAATTT+TGG | + | chr4_4:30984938-30984957 | None:intergenic | 15.0% |
| !! | TATATATAACACAGGTTAAT+TGG | - | chr4_4:30976772-30976791 | Msa0677430:intron | 20.0% |
| !!! | ATTTTTTTTTCAGCTTTGAA+AGG | - | chr4_4:30977064-30977083 | Msa0677430:intron | 20.0% |
| !! | ATAATAATAATGTTCCAAGA+TGG | - | chr4_4:30977953-30977972 | Msa0677430:intron | 20.0% |
| !! | TAATAATAATGTTCCAAGAT+GGG | - | chr4_4:30977954-30977973 | Msa0677430:intron | 20.0% |
| !! | AAAAAAAAAAAGAAGAAGCT+AGG | - | chr4_4:30978656-30978675 | Msa0677430:CDS | 20.0% |
| !!! | GAATTTTTTTTGTCTGATAT+TGG | - | chr4_4:30978802-30978821 | Msa0677430:CDS | 20.0% |
| !!! | TATTTATTTTTAGGTTTTGG+GGG | - | chr4_4:30978951-30978970 | Msa0677430:CDS | 20.0% |
| !! | AAATGCAAGAATAACATAAT+AGG | + | chr4_4:30979005-30979024 | None:intergenic | 20.0% |
| !!! | TCATTTTCTTTTGAAATCTT+GGG | - | chr4_4:30979065-30979084 | Msa0677430:intron | 20.0% |
| !!! | TTTTCTACACTTTTTGAAAA+TGG | + | chr4_4:30979259-30979278 | None:intergenic | 20.0% |
| !! | AGATCTATCAAATCAAAATA+AGG | - | chr4_4:30979321-30979340 | Msa0677430:intron | 20.0% |
| !! | AAATTGGAAGCAATTTATAT+AGG | - | chr4_4:30979351-30979370 | Msa0677430:intron | 20.0% |
| !! | AATTGGAAGCAATTTATATA+GGG | - | chr4_4:30979352-30979371 | Msa0677430:intron | 20.0% |
| !! | TCGTGAAAACAAAAAAAAAA+AGG | - | chr4_4:30979434-30979453 | Msa0677430:intron | 20.0% |
| !!! | TAAACAAAGGTACTAATTAA+TGG | + | chr4_4:30979712-30979731 | None:intergenic | 20.0% |
| !! | GTTTATATTTCATCATATAG+GGG | - | chr4_4:30979727-30979746 | Msa0677430:intron | 20.0% |
| !! | AAAACACTAGATAATGTAAA+TGG | + | chr4_4:30979795-30979814 | None:intergenic | 20.0% |
| !!! | ATTTACATTATCTAGTGTTT+TGG | - | chr4_4:30979794-30979813 | Msa0677430:intron | 20.0% |
| !!! | TTTACATTATCTAGTGTTTT+GGG | - | chr4_4:30979795-30979814 | Msa0677430:intron | 20.0% |
| !! | TTTGTCAAACAGTAATTAAT+AGG | - | chr4_4:30979916-30979935 | Msa0677430:intron | 20.0% |
| !!! | ATTTTTTAGGAGACTAATTT+GGG | + | chr4_4:30979977-30979996 | None:intergenic | 20.0% |
| !!! | AATTTTTTAGGAGACTAATT+TGG | + | chr4_4:30979978-30979997 | None:intergenic | 20.0% |
| !! | TTTCTATTATATGATGAATG+AGG | - | chr4_4:30980200-30980219 | Msa0677430:intron | 20.0% |
| !! | ATGAGGATTAATTTATCTTA+TGG | - | chr4_4:30980217-30980236 | Msa0677430:intron | 20.0% |
| !!! | TGTCAGTTTATTTTTTTATC+GGG | - | chr4_4:30980247-30980266 | Msa0677430:intron | 20.0% |
| !! | TTTAAAAGGATTGATTGAAA+TGG | - | chr4_4:30980405-30980424 | Msa0677430:intron | 20.0% |
| !!! | ACAAATTTTCTCAAATCATA+TGG | - | chr4_4:30980559-30980578 | Msa0677430:intron | 20.0% |
| !! | AACAAAACACTTAGAAAAAT+GGG | + | chr4_4:30980684-30980703 | None:intergenic | 20.0% |
| !! | AAACAAAACACTTAGAAAAA+TGG | + | chr4_4:30980685-30980704 | None:intergenic | 20.0% |
| !!! | TTTTCTAAGTGTTTTGTTTA+TGG | - | chr4_4:30980686-30980705 | Msa0677430:intron | 20.0% |
| !!! | CTATTTTCTCAAATTATTAC+TGG | - | chr4_4:30980978-30980997 | Msa0677430:intron | 20.0% |
| !! | AGTACAAAACAAAACTAATT+TGG | + | chr4_4:30981187-30981206 | None:intergenic | 20.0% |
| !! | TCGTTAAAATTTAGTTGTAT+AGG | - | chr4_4:30982216-30982235 | Msa0677430:intron | 20.0% |
| !! | ACTATATATAGTTGGAAAAA+TGG | - | chr4_4:30982618-30982637 | Msa0677430:intron | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr4_4:30983284-30983303 | None:intergenic | 20.0% |
| !! | ATGTACAGATTAAATATGTT+TGG | - | chr4_4:30983384-30983403 | Msa0677430:intron | 20.0% |
| !!! | TCATAATCTAAGTTTTTTCT+AGG | + | chr4_4:30983596-30983615 | None:intergenic | 20.0% |
| !! | ATTCTCTGTATAATAATCTT+TGG | + | chr4_4:30983955-30983974 | None:intergenic | 20.0% |
| !!! | TTTTATTCTATCTTTTTACG+GGG | - | chr4_4:30984190-30984209 | Msa0677430:CDS | 20.0% |
| !! | TTGTTAAGCTTTAGCATATA+CGG | + | chr4_4:30976701-30976720 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGTCTTCTTCTTT+AGG | - | chr4_4:30976722-30976741 | Msa0677430:intron | 25.0% |
| ! | AACCTGTGTTATATATATGT+CGG | + | chr4_4:30976769-30976788 | None:intergenic | 25.0% |
| !! | GAAGGAAATTACACTATTTT+CGG | - | chr4_4:30976794-30976813 | Msa0677430:intron | 25.0% |
| !!! | TTTTCTTTGGTTTTGATTAC+CGG | - | chr4_4:30976872-30976891 | Msa0677430:intron | 25.0% |
| ! | ATTTCCAACTACTATACTTA+AGG | + | chr4_4:30977090-30977109 | None:intergenic | 25.0% |
| ! | AAGTATAGTAGTTGGAAATT+TGG | - | chr4_4:30977091-30977110 | Msa0677430:intron | 25.0% |
| !! | AATTGTTCAATGTTGTTGTT+AGG | + | chr4_4:30977190-30977209 | None:intergenic | 25.0% |
| ! | TCATGAAATACAGGTATAAT+AGG | + | chr4_4:30977583-30977602 | None:intergenic | 25.0% |
| ! | ATGAAAATCAAGCAAATTTG+TGG | - | chr4_4:30977599-30977618 | Msa0677430:intron | 25.0% |
| !!! | CAACAATTTTGAAGAATTCA+AGG | - | chr4_4:30977863-30977882 | Msa0677430:intron | 25.0% |
| !!! | TTTTTTAATATGTGCCCTAA+GGG | + | chr4_4:30978280-30978299 | None:intergenic | 25.0% |
| ! | ATAAAGGGAAATGCTAATTT+GGG | + | chr4_4:30978429-30978448 | None:intergenic | 25.0% |
| ! | AATAAAGGGAAATGCTAATT+TGG | + | chr4_4:30978430-30978449 | None:intergenic | 25.0% |
| ! | TAACTTAATTAATGTCTGTC+AGG | - | chr4_4:30978502-30978521 | Msa0677430:intron | 25.0% |
| ! | GACAAAATTGTATTATCATG+TGG | - | chr4_4:30978703-30978722 | Msa0677430:CDS | 25.0% |
| !!! | TGGTATATTTTTTCAAGACA+TGG | - | chr4_4:30978723-30978742 | Msa0677430:CDS | 25.0% |
| ! | TGATATTGGATTTCTATTCT+TGG | - | chr4_4:30978816-30978835 | Msa0677430:CDS | 25.0% |
| ! | CTTACTATTATTGCAAATCT+AGG | - | chr4_4:30978905-30978924 | Msa0677430:CDS | 25.0% |
| ! | AATAACATAATAGGACAGAA+TGG | + | chr4_4:30978996-30979015 | None:intergenic | 25.0% |
| !!! | CTCATTTTCTTTTGAAATCT+TGG | - | chr4_4:30979064-30979083 | Msa0677430:intron | 25.0% |
| !! | CTAAAAGTTGTGATTTTACA+GGG | + | chr4_4:30979199-30979218 | None:intergenic | 25.0% |
| !! | TCTAAAAGTTGTGATTTTAC+AGG | + | chr4_4:30979200-30979219 | None:intergenic | 25.0% |
| ! | TTGGCAAAAAATTTCAACAA+AGG | - | chr4_4:30979474-30979493 | Msa0677430:intron | 25.0% |
| !!! | GTCAGTTTATTTTTTTATCG+GGG | - | chr4_4:30980248-30980267 | Msa0677430:intron | 25.0% |
| !! | GGGGCTAAAATAAATTATTT+TGG | + | chr4_4:30980306-30980325 | None:intergenic | 25.0% |
| !!! | TTTATTTTAGCCCCTTAATT+TGG | - | chr4_4:30980312-30980331 | Msa0677430:intron | 25.0% |
| ! | AACAATGATTCCAAATTAAG+GGG | + | chr4_4:30980325-30980344 | None:intergenic | 25.0% |
| ! | CAACAATGATTCCAAATTAA+GGG | + | chr4_4:30980326-30980345 | None:intergenic | 25.0% |
| !! | TTTATTCTATTTTCTGTCTG+TGG | - | chr4_4:30980460-30980479 | Msa0677430:intron | 25.0% |
| !! | TTATTCTATTTTCTGTCTGT+GGG | - | chr4_4:30980461-30980480 | Msa0677430:intron | 25.0% |
| !! | CAAATCATATGGATATTTTC+TGG | - | chr4_4:30980570-30980589 | Msa0677430:intron | 25.0% |
| !! | ATGTTGATTGTATTTAGGTT+TGG | - | chr4_4:30980596-30980615 | Msa0677430:intron | 25.0% |
| !! | TTTGCTTTCTAAGAAACATA+TGG | - | chr4_4:30980752-30980771 | Msa0677430:intron | 25.0% |
| ! | AATGATACATGTTATTCACA+TGG | - | chr4_4:30980829-30980848 | Msa0677430:intron | 25.0% |
| ! | ATGATACATGTTATTCACAT+GGG | - | chr4_4:30980830-30980849 | Msa0677430:intron | 25.0% |
| ! | CTTTGTGTTAAATATTCCAA+AGG | - | chr4_4:30981090-30981109 | Msa0677430:intron | 25.0% |
| ! | TTAAGAATAGAGTTTGAACT+TGG | + | chr4_4:30981124-30981143 | None:intergenic | 25.0% |
| !!! | TTGTTTTGTACTTAGTTTGA+TGG | - | chr4_4:30981195-30981214 | Msa0677430:intron | 25.0% |
| ! | TTGCATTAACTTACTCAAAT+TGG | - | chr4_4:30981591-30981610 | Msa0677430:intron | 25.0% |
| ! | TATTACATAACTTTCCTTGT+TGG | - | chr4_4:30981840-30981859 | Msa0677430:intron | 25.0% |
| ! | ATAGAAAGAACACAAATCAT+AGG | - | chr4_4:30981917-30981936 | Msa0677430:intron | 25.0% |
| ! | TAGAAAGAACACAAATCATA+GGG | - | chr4_4:30981918-30981937 | Msa0677430:intron | 25.0% |
| !! | ACAGAAGGTGTAAATTATTA+AGG | + | chr4_4:30981990-30982009 | None:intergenic | 25.0% |
| !! | ATTTGAACTTTTTGAACAGA+AGG | + | chr4_4:30982005-30982024 | None:intergenic | 25.0% |
| !! | TTATGTATTGACCAATTTCT+TGG | - | chr4_4:30982074-30982093 | Msa0677430:intron | 25.0% |
| ! | CAATAATACAACCAAGAAAT+TGG | + | chr4_4:30982088-30982107 | None:intergenic | 25.0% |
| ! | TTTCTTGGTTGTATTATTGT+TGG | - | chr4_4:30982089-30982108 | Msa0677430:intron | 25.0% |
| !!! | GTATAGGATTAGTTTTAAGT+TGG | - | chr4_4:30982232-30982251 | Msa0677430:intron | 25.0% |
| !! | CACTTTATACATTGATTGTA+AGG | + | chr4_4:30982270-30982289 | None:intergenic | 25.0% |
| ! | AATGTATAAAGTGTATCCTA+GGG | - | chr4_4:30982277-30982296 | Msa0677430:intron | 25.0% |
| ! | AATTGATATAGGTTACAAGA+AGG | - | chr4_4:30982658-30982677 | Msa0677430:intron | 25.0% |
| ! | AAACTTACATGTCAAGTATT+AGG | - | chr4_4:30982831-30982850 | Msa0677430:intron | 25.0% |
| !! | AAATTTATTACTGCTACTTG+TGG | + | chr4_4:30982883-30982902 | None:intergenic | 25.0% |
| ! | ATAATAATATGACAAGGCTA+AGG | - | chr4_4:30982913-30982932 | Msa0677430:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr4_4:30983175-30983194 | None:intergenic | 25.0% |
| !!! | TGAAATGACTCAGTTATTTT+GGG | + | chr4_4:30983196-30983215 | None:intergenic | 25.0% |
| !! | TTGAAATGACTCAGTTATTT+TGG | + | chr4_4:30983197-30983216 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr4_4:30983285-30983304 | None:intergenic | 25.0% |
| ! | TGAAAAATAGTTCCAAGTTA+TGG | - | chr4_4:30983613-30983632 | Msa0677430:CDS | 25.0% |
| !! | TTTTCTATTCTGAATCATAC+AGG | - | chr4_4:30983844-30983863 | Msa0677430:CDS | 25.0% |
| ! | TTATACTGGTATTTATCTCA+AGG | - | chr4_4:30983867-30983886 | Msa0677430:CDS | 25.0% |
| ! | TATACTGGTATTTATCTCAA+GGG | - | chr4_4:30983868-30983887 | Msa0677430:CDS | 25.0% |
| ! | AAGATGTATGTATGTAAGAA+GGG | - | chr4_4:30984014-30984033 | Msa0677430:CDS | 25.0% |
| ! | TCTATATAAATGCTCCATTA+AGG | + | chr4_4:30984065-30984084 | None:intergenic | 25.0% |
| !! | CAGGTGTTCATTATATTTTT+AGG | - | chr4_4:30984227-30984246 | Msa0677430:CDS | 25.0% |
| ! | TTTCTTTCTTGATTAGGTTT+GGG | + | chr4_4:30984833-30984852 | None:intergenic | 25.0% |
| ! | TTAATAACTCGATAAATTCG+CGG | - | chr4_4:30984941-30984960 | Msa0677430:five_prime_UTR | 25.0% |
| !!! | AACTTCCAACTTTTATTTTG+AGG | + | chr4_4:30984990-30985009 | None:intergenic | 25.0% |
| !! | AATGTATAAATGGTTTGTAC+AGG | - | chr4_4:30985287-30985306 | Msa0677430:five_prime_UTR | 25.0% |
| ! | AAGATAGATTCTTGTTTGTG+TGG | + | chr4_4:30976472-30976491 | None:intergenic | 30.0% |
| AGAAACTTCTTAGATTACCT+TGG | + | chr4_4:30976498-30976517 | None:intergenic | 30.0% | |
| CTCTCTTATAACAACTCAAA+TGG | + | chr4_4:30976650-30976669 | None:intergenic | 30.0% | |
| AGTTGTTATAAGAGAGATCA+AGG | - | chr4_4:30976654-30976673 | Msa0677430:intron | 30.0% | |
| GTTGTTATAAGAGAGATCAA+GGG | - | chr4_4:30976655-30976674 | Msa0677430:intron | 30.0% | |
| TACCGACATATATATAACAC+AGG | - | chr4_4:30976764-30976783 | Msa0677430:intron | 30.0% | |
| TATAACACAGGTTAATTGGA+AGG | - | chr4_4:30976776-30976795 | Msa0677430:intron | 30.0% | |
| AAATTAGGAGAGACAAATTG+AGG | - | chr4_4:30977146-30977165 | Msa0677430:intron | 30.0% | |
| TTTCTGTGTAAAGGATTTGA+GGG | + | chr4_4:30977358-30977377 | None:intergenic | 30.0% | |
| GTTCATGACAATATTCCAAA+GGG | + | chr4_4:30977381-30977400 | None:intergenic | 30.0% | |
| AGTTCATGACAATATTCCAA+AGG | + | chr4_4:30977382-30977401 | None:intergenic | 30.0% | |
| GAAGACTTGAAAATATCAGT+AGG | + | chr4_4:30977475-30977494 | None:intergenic | 30.0% | |
| ! | TGAAGTACTATGTGAACTAA+TGG | + | chr4_4:30977503-30977522 | None:intergenic | 30.0% |
| TTCACATAGTACTTCAGAAA+TGG | - | chr4_4:30977507-30977526 | Msa0677430:intron | 30.0% | |
| GCTTCTTTAATGAATCATCA+TGG | - | chr4_4:30977529-30977548 | Msa0677430:intron | 30.0% | |
| TAATGAATCATCATGGCATT+TGG | - | chr4_4:30977536-30977555 | Msa0677430:intron | 30.0% | |
| AATGAATCATCATGGCATTT+GGG | - | chr4_4:30977537-30977556 | Msa0677430:intron | 30.0% | |
| ! | GCTTGATTTTCATGAAATAC+AGG | + | chr4_4:30977592-30977611 | None:intergenic | 30.0% |
| ! | TTTACTGATTACAATCCTCA+AGG | - | chr4_4:30977667-30977686 | Msa0677430:intron | 30.0% |
| TGAATTTGATGAAAGTGACA+AGG | + | chr4_4:30977698-30977717 | None:intergenic | 30.0% | |
| AAATTCGAAGATGAAGTTGA+GGG | + | chr4_4:30977730-30977749 | None:intergenic | 30.0% | |
| AAAATTCGAAGATGAAGTTG+AGG | + | chr4_4:30977731-30977750 | None:intergenic | 30.0% | |
| AACCAACAACACTAATTTCT+AGG | - | chr4_4:30977776-30977795 | Msa0677430:intron | 30.0% | |
| ACCAACAACACTAATTTCTA+GGG | - | chr4_4:30977777-30977796 | Msa0677430:intron | 30.0% | |
| TCAAAAGAGAAAGAGAATAG+TGG | - | chr4_4:30978084-30978103 | Msa0677430:intron | 30.0% | |
| !!! | GTAATTGAGCCTTATTCTTT+TGG | + | chr4_4:30978173-30978192 | None:intergenic | 30.0% |
| GGAAATAAAACAGACTACAA+GGG | + | chr4_4:30978239-30978258 | None:intergenic | 30.0% | |
| !!! | GTTTTTTAATATGTGCCCTA+AGG | + | chr4_4:30978281-30978300 | None:intergenic | 30.0% |
| !!! | GTCTTTTACTGTTGATTCAA+AGG | - | chr4_4:30978593-30978612 | Msa0677430:intron | 30.0% |
| ATGGTTAAGTTTGTAGCTTA+CGG | - | chr4_4:30978742-30978761 | Msa0677430:CDS | 30.0% | |
| ! | ATATAGTTCTTTTATCCCCT+AGG | + | chr4_4:30979301-30979320 | None:intergenic | 30.0% |
| !!! | GGTGTGAAATAAGAGTATTT+TGG | - | chr4_4:30979455-30979474 | Msa0677430:intron | 30.0% |
| !!! | TTTTTTGTTCAATAGCCTAG+TGG | - | chr4_4:30980055-30980074 | Msa0677430:intron | 30.0% |
| !!! | CACACACTTTTTTTAAAGTG+TGG | - | chr4_4:30980084-30980103 | Msa0677430:intron | 30.0% |
| !!! | TTTTTTAAAGTGTGGAGAAG+TGG | - | chr4_4:30980092-30980111 | Msa0677430:intron | 30.0% |
| !!! | TTTTTAAAGTGTGGAGAAGT+GGG | - | chr4_4:30980093-30980112 | Msa0677430:intron | 30.0% |
| !!! | TTTTTTATCGGGGACTAAAT+CGG | - | chr4_4:30980258-30980277 | Msa0677430:intron | 30.0% |
| CCAACAATGATTCCAAATTA+AGG | + | chr4_4:30980327-30980346 | None:intergenic | 30.0% | |
| ! | CCTTAATTTGGAATCATTGT+TGG | - | chr4_4:30980324-30980343 | Msa0677430:intron | 30.0% |
| AAAAGGATTGATTGAAATGG+TGG | - | chr4_4:30980408-30980427 | Msa0677430:intron | 30.0% | |
| ! | TATTCTATTTTCTGTCTGTG+GGG | - | chr4_4:30980462-30980481 | Msa0677430:intron | 30.0% |
| !! | TTAGCTTTGATTTGACATTG+TGG | - | chr4_4:30980512-30980531 | Msa0677430:intron | 30.0% |
| ! | TGTTGGTTATTTGGTATTTG+AGG | - | chr4_4:30980535-30980554 | Msa0677430:intron | 30.0% |
| ! | GGTGAATGTTGATTGTATTT+AGG | - | chr4_4:30980591-30980610 | Msa0677430:intron | 30.0% |
| ! | ATTGTATTTAGGTTTGGTCT+TGG | - | chr4_4:30980602-30980621 | Msa0677430:intron | 30.0% |
| !!! | TAAGTGTTTTGTTTATGGCT+TGG | - | chr4_4:30980691-30980710 | Msa0677430:intron | 30.0% |
| !! | ACAACATCATTCTGAAATGT+CGG | + | chr4_4:30980907-30980926 | None:intergenic | 30.0% |
| AACAAAACTAATTTGGTACG+AGG | + | chr4_4:30981180-30981199 | None:intergenic | 30.0% | |
| !! | TGCAGAAATCTCTAAAACAA+TGG | - | chr4_4:30981297-30981316 | Msa0677430:intron | 30.0% |
| AGTTCTTTATACTACCAACA+AGG | + | chr4_4:30981857-30981876 | None:intergenic | 30.0% | |
| AGAAAGAACACAAATCATAG+GGG | - | chr4_4:30981919-30981938 | Msa0677430:intron | 30.0% | |
| ! | AGTAGATTTTCTGATGCAAT+AGG | - | chr4_4:30982042-30982061 | Msa0677430:intron | 30.0% |
| ! | AAGTTTTCAGTATGAAGTGT+CGG | + | chr4_4:30982133-30982152 | None:intergenic | 30.0% |
| ! | TTCATACTGAAAACTTGTTC+TGG | - | chr4_4:30982137-30982156 | Msa0677430:intron | 30.0% |
| CAATGTATAAAGTGTATCCT+AGG | - | chr4_4:30982276-30982295 | Msa0677430:intron | 30.0% | |
| ! | AAGTTGATTTCAATTACCCT+AGG | + | chr4_4:30982296-30982315 | None:intergenic | 30.0% |
| ! | CGAACAACAAAGATTGATTT+CGG | + | chr4_4:30982332-30982351 | None:intergenic | 30.0% |
| ATACCATCAACAAATGCAAA+TGG | - | chr4_4:30982689-30982708 | Msa0677430:intron | 30.0% | |
| ! | TTTAGAGCCAATGAAATGTA+TGG | + | chr4_4:30982759-30982778 | None:intergenic | 30.0% |
| ! | GATCTGTGATAGCATTTTTA+AGG | + | chr4_4:30982806-30982825 | None:intergenic | 30.0% |
| AGCTTACAAAAGAACAAATC+TGG | - | chr4_4:30982951-30982970 | Msa0677430:intron | 30.0% | |
| AGAAAATGGATCAGATATTC+CGG | + | chr4_4:30983161-30983180 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr4_4:30983300-30983319 | None:intergenic | 30.0% | |
| AAATAGTTCCAAGTTATGGA+TGG | - | chr4_4:30983617-30983636 | Msa0677430:CDS | 30.0% | |
| AGTGAATGAAAAAAGCAGTA+GGG | - | chr4_4:30983713-30983732 | Msa0677430:CDS | 30.0% | |
| GAAGATGTATGTATGTAAGA+AGG | - | chr4_4:30984013-30984032 | Msa0677430:CDS | 30.0% | |
| ! | CATGTCTAAATGTCTAGTTT+GGG | + | chr4_4:30984323-30984342 | None:intergenic | 30.0% |
| CAAACTAGACATTTAGACAT+GGG | - | chr4_4:30984322-30984341 | Msa0677430:CDS | 30.0% | |
| !! | ATTGTACTTTTTGCAAGTAC+AGG | - | chr4_4:30984699-30984718 | Msa0677430:intron | 30.0% |
| ACTATACACACACTAGAATT+AGG | + | chr4_4:30984803-30984822 | None:intergenic | 30.0% | |
| GTTTCTTTCTTGATTAGGTT+TGG | + | chr4_4:30984834-30984853 | None:intergenic | 30.0% | |
| ! | CCATTGTTTCTTTCTTGATT+AGG | + | chr4_4:30984839-30984858 | None:intergenic | 30.0% |
| CCTAATCAAGAAAGAAACAA+TGG | - | chr4_4:30984836-30984855 | Msa0677430:five_prime_UTR | 30.0% | |
| ! | AGTAACAAACCATTTTCTTG+TGG | + | chr4_4:30984888-30984907 | None:intergenic | 30.0% |
| CATGACCTCAAAATAAAAGT+TGG | - | chr4_4:30984982-30985001 | Msa0677430:intron | 30.0% | |
| TAGAAGCAGCTATGTTATAT+GGG | + | chr4_4:30985018-30985037 | None:intergenic | 30.0% | |
| ATAGAAGCAGCTATGTTATA+TGG | + | chr4_4:30985019-30985038 | None:intergenic | 30.0% | |
| AGTCAATTGAGGAAAAATGT+GGG | - | chr4_4:30985168-30985187 | Msa0677430:intron | 30.0% | |
| GAGTTCACAGAATGTATAAA+TGG | - | chr4_4:30985277-30985296 | Msa0677430:five_prime_UTR | 30.0% | |
| GATAGATAGGAAATGGAAGT+GGG | + | chr4_4:30976447-30976466 | None:intergenic | 35.0% | |
| ! | ATAGATTCTTGTTTGTGTGG+AGG | + | chr4_4:30976469-30976488 | None:intergenic | 35.0% |
| AACTTCTTAGATTACCTTGG+TGG | + | chr4_4:30976495-30976514 | None:intergenic | 35.0% | |
| GTGAATATACTAGATGTGAG+TGG | - | chr4_4:30976558-30976577 | Msa0677430:CDS | 35.0% | |
| TATACTAGATGTGAGTGGTT+TGG | - | chr4_4:30976563-30976582 | Msa0677430:CDS | 35.0% | |
| CTCAAATGGATCTAGTTGTT+GGG | + | chr4_4:30976636-30976655 | None:intergenic | 35.0% | |
| ACTCAAATGGATCTAGTTGT+TGG | + | chr4_4:30976637-30976656 | None:intergenic | 35.0% | |
| AAACTCGAGCGTTAAGAATT+TGG | + | chr4_4:30976855-30976874 | None:intergenic | 35.0% | |
| TTTGATTACCGGAGAATCAA+AGG | - | chr4_4:30976883-30976902 | Msa0677430:intron | 35.0% | |
| AACTTCTACCTTTGATTCTC+CGG | + | chr4_4:30976894-30976913 | None:intergenic | 35.0% | |
| AAGGCCTTAAGTATAGTAGT+TGG | - | chr4_4:30977083-30977102 | Msa0677430:intron | 35.0% | |
| ! | GTAGTTGGAAATTTGGAATG+AGG | - | chr4_4:30977098-30977117 | Msa0677430:intron | 35.0% |
| TGCATGTTGCACAACAAATT+AGG | - | chr4_4:30977131-30977150 | Msa0677430:intron | 35.0% | |
| TGTTAGGAAACACTTGATTC+TGG | + | chr4_4:30977174-30977193 | None:intergenic | 35.0% | |
| ATCATCAAGCATGTTGTTGT+TGG | + | chr4_4:30977281-30977300 | None:intergenic | 35.0% | |
| ! | CTTGATGATCATGATCAAGA+AGG | - | chr4_4:30977292-30977311 | Msa0677430:intron | 35.0% |
| GTTTCTGTGTAAAGGATTTG+AGG | + | chr4_4:30977359-30977378 | None:intergenic | 35.0% | |
| TAGCTGAATCAAGTAACAGT+AGG | - | chr4_4:30977401-30977420 | Msa0677430:intron | 35.0% | |
| AGCTGAATCAAGTAACAGTA+GGG | - | chr4_4:30977402-30977421 | Msa0677430:intron | 35.0% | |
| ATGAATCATCATGGCATTTG+GGG | - | chr4_4:30977538-30977557 | Msa0677430:intron | 35.0% | |
| GCAAATTTGTGGACAAATAG+AGG | - | chr4_4:30977610-30977629 | Msa0677430:intron | 35.0% | |
| TCCCTAGAAATTAGTGTTGT+TGG | + | chr4_4:30977781-30977800 | None:intergenic | 35.0% | |
| CTACTAGTAGTAGTGGTTTA+AGG | - | chr4_4:30977806-30977825 | Msa0677430:intron | 35.0% | |
| AGTAGTGGTTTAAGGAATGT+TGG | - | chr4_4:30977814-30977833 | Msa0677430:intron | 35.0% | |
| ATTGTTGCATAGCCAGTAAA+TGG | + | chr4_4:30977850-30977869 | None:intergenic | 35.0% | |
| TCTTCTAACAACTCTTGACA+AGG | + | chr4_4:30977898-30977917 | None:intergenic | 35.0% | |
| GCAAAAGGTAGTAGTAATTC+AGG | - | chr4_4:30978036-30978055 | Msa0677430:intron | 35.0% | |
| AAAGGTAGTAGTAATTCAGG+TGG | - | chr4_4:30978039-30978058 | Msa0677430:intron | 35.0% | |
| GGTTCATCTTCAATGTTGTA+TGG | - | chr4_4:30978060-30978079 | Msa0677430:intron | 35.0% | |
| AAAGAGAAAGAGAATAGTGG+TGG | - | chr4_4:30978087-30978106 | Msa0677430:intron | 35.0% | |
| CGGAAATAAAACAGACTACA+AGG | + | chr4_4:30978240-30978259 | None:intergenic | 35.0% | |
| AAGAAGCTAGGTTTGATGTT+CGG | - | chr4_4:30978668-30978687 | Msa0677430:CDS | 35.0% | |
| AGCTTACGGATTTCTTAGAT+TGG | - | chr4_4:30978756-30978775 | Msa0677430:CDS | 35.0% | |
| !! | TTTCTTAGATTGGTCTGATG+TGG | - | chr4_4:30978766-30978785 | Msa0677430:CDS | 35.0% |
| !!! | TTATTTTTAGGTTTTGGGGG+TGG | - | chr4_4:30978954-30978973 | Msa0677430:CDS | 35.0% |
| !!! | TATTTTTAGGTTTTGGGGGT+GGG | - | chr4_4:30978955-30978974 | Msa0677430:CDS | 35.0% |
| TTTATTGGGTGAAACTCATG+CGG | - | chr4_4:30979553-30979572 | Msa0677430:intron | 35.0% | |
| TTTATTGAGTGAAACTCACG+TGG | + | chr4_4:30979621-30979640 | None:intergenic | 35.0% | |
| !!! | CTAGTGTTTTGGGATACAAA+AGG | - | chr4_4:30979805-30979824 | Msa0677430:intron | 35.0% |
| !!! | TTTTAAAGTGTGGAGAAGTG+GGG | - | chr4_4:30980094-30980113 | Msa0677430:intron | 35.0% |
| TACCATGGACAATATTTGCA+GGG | + | chr4_4:30980142-30980161 | None:intergenic | 35.0% | |
| ! | TTTTTATCGGGGACTAAATC+GGG | - | chr4_4:30980259-30980278 | Msa0677430:intron | 35.0% |
| GGGTCAAAAGAAATTTGTGA+TGG | - | chr4_4:30980279-30980298 | Msa0677430:intron | 35.0% | |
| GTGTGTGTATGTGTGTATAT+TGG | + | chr4_4:30980372-30980391 | None:intergenic | 35.0% | |
| ! | CTCACATGGATGCTTTTAAA+AGG | - | chr4_4:30980391-30980410 | Msa0677430:intron | 35.0% |
| ! | TTGATTTGACATTGTGGTGT+TGG | - | chr4_4:30980518-30980537 | Msa0677430:intron | 35.0% |
| !! | ACATTGTGGTGTTGGTTATT+TGG | - | chr4_4:30980526-30980545 | Msa0677430:intron | 35.0% |
| ACAAACCAGTTGTGAAACAT+GGG | + | chr4_4:30980723-30980742 | None:intergenic | 35.0% | |
| TACAAACCAGTTGTGAAACA+TGG | + | chr4_4:30980724-30980743 | None:intergenic | 35.0% | |
| GATGCAAATTAATCCACCTA+TGG | - | chr4_4:30980854-30980873 | Msa0677430:intron | 35.0% | |
| TTTATGTGTCAGTGTTGTGT+TGG | + | chr4_4:30980942-30980961 | None:intergenic | 35.0% | |
| ! | ATTATTACTGGTGTCAGTGT+AGG | - | chr4_4:30980990-30981009 | Msa0677430:intron | 35.0% |
| ! | TTAGATGTTGAAGTATCCCA+TGG | - | chr4_4:30981052-30981071 | Msa0677430:intron | 35.0% |
| GTAATAGAAGAATCTGCCAT+GGG | + | chr4_4:30981071-30981090 | None:intergenic | 35.0% | |
| AGTAATAGAAGAATCTGCCA+TGG | + | chr4_4:30981072-30981091 | None:intergenic | 35.0% | |
| TAATTTGGTACGAGGAAAAG+TGG | + | chr4_4:30981172-30981191 | None:intergenic | 35.0% | |
| ! | AGTTTGATGGAGAAGAGTTT+TGG | - | chr4_4:30981208-30981227 | Msa0677430:intron | 35.0% |
| !!! | GTTTGGGTTTGGGTTTTTTT+TGG | + | chr4_4:30981473-30981492 | None:intergenic | 35.0% |
| !! | CCAAAAAAGCGTTCTTGTTT+GGG | + | chr4_4:30981489-30981508 | None:intergenic | 35.0% |
| !! | TCCAAAAAAGCGTTCTTGTT+TGG | + | chr4_4:30981490-30981509 | None:intergenic | 35.0% |
| TAAGTTAATGCAACCAGGTA+GGG | + | chr4_4:30981584-30981603 | None:intergenic | 35.0% | |
| TTGAGTAAGTTAATGCAACC+AGG | + | chr4_4:30981589-30981608 | None:intergenic | 35.0% | |
| ! | TGTAGTGATTGTTATTGACG+TGG | - | chr4_4:30981767-30981786 | Msa0677430:intron | 35.0% |
| AATAGTGTTCTTACAGTGCA+TGG | - | chr4_4:30981791-30981810 | Msa0677430:intron | 35.0% | |
| ! | TACTGAAAACTTGTTCTGGT+CGG | - | chr4_4:30982141-30982160 | Msa0677430:intron | 35.0% |
| AGCTACACCATACATTTCAT+TGG | - | chr4_4:30982749-30982768 | Msa0677430:intron | 35.0% | |
| TACATGTCAAGTATTAGGAG+AGG | - | chr4_4:30982836-30982855 | Msa0677430:intron | 35.0% | |
| ! | AAAAGAACAAATCTGGAGCT+GGG | - | chr4_4:30982958-30982977 | Msa0677430:intron | 35.0% |
| AGAGTGACAGAGAAAACATA+CGG | + | chr4_4:30983101-30983120 | None:intergenic | 35.0% | |
| GAAAATGGATCAGATATTCC+GGG | + | chr4_4:30983160-30983179 | None:intergenic | 35.0% | |
| ATCTGTGTGAAAAACCAAAC+TGG | - | chr4_4:30983329-30983348 | Msa0677430:intron | 35.0% | |
| ! | AGTGTTTTCCATCCATAACT+TGG | + | chr4_4:30983628-30983647 | None:intergenic | 35.0% |
| CAGTGAATGAAAAAAGCAGT+AGG | - | chr4_4:30983712-30983731 | Msa0677430:CDS | 35.0% | |
| CTGAATCATACAGGTTATAC+TGG | - | chr4_4:30983853-30983872 | Msa0677430:CDS | 35.0% | |
| AATTCTCTTACACGCATCTT+GGG | + | chr4_4:30983917-30983936 | None:intergenic | 35.0% | |
| AAATTCTCTTACACGCATCT+TGG | + | chr4_4:30983918-30983937 | None:intergenic | 35.0% | |
| CGGGGAAAAAAAAATAGAAC+AGG | - | chr4_4:30984208-30984227 | Msa0677430:CDS | 35.0% | |
| TTGGGCTTATCCAAACATAA+AGG | + | chr4_4:30984305-30984324 | None:intergenic | 35.0% | |
| CCATGTCTAAATGTCTAGTT+TGG | + | chr4_4:30984324-30984343 | None:intergenic | 35.0% | |
| CCAAACTAGACATTTAGACA+TGG | - | chr4_4:30984321-30984340 | Msa0677430:CDS | 35.0% | |
| ! | TCAGGTTGTTACGACTAAAA+GGG | - | chr4_4:30984566-30984585 | Msa0677430:CDS | 35.0% |
| AACACTATAAATACGACCCT+TGG | - | chr4_4:30984596-30984615 | Msa0677430:exon | 35.0% | |
| ACACTATAAATACGACCCTT+GGG | - | chr4_4:30984597-30984616 | Msa0677430:exon | 35.0% | |
| ATCTGTGAAAGTGATGATCT+GGG | + | chr4_4:30984629-30984648 | None:intergenic | 35.0% | |
| AATCTGTGAAAGTGATGATC+TGG | + | chr4_4:30984630-30984649 | None:intergenic | 35.0% | |
| ! | TTTTGCAAGTACAGGTTCTT+TGG | - | chr4_4:30984707-30984726 | Msa0677430:intron | 35.0% |
| ! | TCAAACACGTATAGGAGTTT+TGG | - | chr4_4:30984747-30984766 | Msa0677430:intron | 35.0% |
| ATTCTAGTGTGTGTATAGTG+CGG | - | chr4_4:30984804-30984823 | Msa0677430:intron | 35.0% | |
| TTGTTACTACCCAAGTTACT+TGG | - | chr4_4:30984900-30984919 | Msa0677430:five_prime_UTR | 35.0% | |
| TCCAACTTATCGAATAAGAG+TGG | - | chr4_4:30985038-30985057 | Msa0677430:intron | 35.0% | |
| CCAACTTATCGAATAAGAGT+GGG | - | chr4_4:30985039-30985058 | Msa0677430:intron | 35.0% | |
| CAACTTATCGAATAAGAGTG+GGG | - | chr4_4:30985040-30985059 | Msa0677430:intron | 35.0% | |
| TAGTTGGTCAAATACAAGGA+GGG | - | chr4_4:30985071-30985090 | Msa0677430:intron | 35.0% | |
| GAGTCAATTGAGGAAAAATG+TGG | - | chr4_4:30985167-30985186 | Msa0677430:intron | 35.0% | |
| GGATAGATAGGAAATGGAAG+TGG | + | chr4_4:30976448-30976467 | None:intergenic | 40.0% | |
| TGTGGAGGATAGATAGGAAA+TGG | + | chr4_4:30976454-30976473 | None:intergenic | 40.0% | |
| TGTTTGTGTGGAGGATAGAT+AGG | + | chr4_4:30976460-30976479 | None:intergenic | 40.0% | |
| CAAGAATCTATCTTCCACCA+AGG | - | chr4_4:30976478-30976497 | Msa0677430:CDS | 40.0% | |
| GAATTTGGATCCTCTACAAC+CGG | + | chr4_4:30976840-30976859 | None:intergenic | 40.0% | |
| ! | CTTAACGCTCGAGTTTTCTT+TGG | - | chr4_4:30976859-30976878 | Msa0677430:intron | 40.0% |
| TGTGCAACATGCAATTGATC+TGG | + | chr4_4:30977124-30977143 | None:intergenic | 40.0% | |
| TTATTGAAGCTTGCAGGTTG+TGG | + | chr4_4:30977232-30977251 | None:intergenic | 40.0% | |
| ACCTGCAAGCTTCAATAACT+TGG | - | chr4_4:30977234-30977253 | Msa0677430:intron | 40.0% | |
| TCCAAGTTATTGAAGCTTGC+AGG | + | chr4_4:30977238-30977257 | None:intergenic | 40.0% | |
| TCCTTTACACAGAAACCCTT+TGG | - | chr4_4:30977363-30977382 | Msa0677430:intron | 40.0% | |
| TCCAAAGGGTTTCTGTGTAA+AGG | + | chr4_4:30977367-30977386 | None:intergenic | 40.0% | |
| AGGCAAGAAAGAGTTGGAAT+TGG | + | chr4_4:30977455-30977474 | None:intergenic | 40.0% | |
| ATCAGTAGGCAAGAAAGAGT+TGG | + | chr4_4:30977461-30977480 | None:intergenic | 40.0% | |
| AGTGACAAGGATAAACCTTG+AGG | + | chr4_4:30977685-30977704 | None:intergenic | 40.0% | |
| GACTGTACTACTAGTAGTAG+TGG | - | chr4_4:30977799-30977818 | Msa0677430:intron | 40.0% | |
| TTAAGGAATGTTGGTCCACT+TGG | - | chr4_4:30977823-30977842 | Msa0677430:intron | 40.0% | |
| ACATCTCTTGAAACCCATCT+TGG | + | chr4_4:30977970-30977989 | None:intergenic | 40.0% | |
| TGGGTTTCAAGAGATGTTGT+TGG | - | chr4_4:30977973-30977992 | Msa0677430:intron | 40.0% | |
| !! | GTTGTTGGTTGTTCTAGTTC+TGG | - | chr4_4:30977988-30978007 | Msa0677430:intron | 40.0% |
| GAAAGTGGAGTTTCTGCAAA+AGG | - | chr4_4:30978021-30978040 | Msa0677430:intron | 40.0% | |
| ! | AAAGAGAATAGTGGTGGTGA+TGG | - | chr4_4:30978093-30978112 | Msa0677430:intron | 40.0% |
| ! | ACCAGAGTGCCAAAAGAATA+AGG | - | chr4_4:30978161-30978180 | Msa0677430:intron | 40.0% |
| ATTACTGTACATGCACGATG+AGG | - | chr4_4:30978188-30978207 | Msa0677430:intron | 40.0% | |
| !! | TAGTGTTAACTTGTGCCCTT+AGG | - | chr4_4:30978262-30978281 | Msa0677430:intron | 40.0% |
| !! | AGTGTTAACTTGTGCCCTTA+GGG | - | chr4_4:30978263-30978282 | Msa0677430:intron | 40.0% |
| !!! | ATTTTTAGGTTTTGGGGGTG+GGG | - | chr4_4:30978956-30978975 | Msa0677430:CDS | 40.0% |
| ! | AGTTCTTTTATCCCCTAGGA+GGG | + | chr4_4:30979297-30979316 | None:intergenic | 40.0% |
| ! | TAGTTCTTTTATCCCCTAGG+AGG | + | chr4_4:30979298-30979317 | None:intergenic | 40.0% |
| !!! | TGGATCTCACGTTTTGGAAA+TGG | + | chr4_4:30979601-30979620 | None:intergenic | 40.0% |
| TTAGGAGACTAATTTGGGCT+GGG | + | chr4_4:30979972-30979991 | None:intergenic | 40.0% | |
| TTTAGGAGACTAATTTGGGC+TGG | + | chr4_4:30979973-30979992 | None:intergenic | 40.0% | |
| ACCATGGACAATATTTGCAG+GGG | + | chr4_4:30980141-30980160 | None:intergenic | 40.0% | |
| CTACCATGGACAATATTTGC+AGG | + | chr4_4:30980143-30980162 | None:intergenic | 40.0% | |
| TACCAACTGAGCTACACTTA+CGG | - | chr4_4:30980164-30980183 | Msa0677430:intron | 40.0% | |
| AAACAATTGCACGACATGGT+TGG | + | chr4_4:30980661-30980680 | None:intergenic | 40.0% | |
| GTATTCCCATGTTTCACAAC+TGG | - | chr4_4:30980715-30980734 | Msa0677430:intron | 40.0% | |
| CAGAATGATGTTGTACTCAG+AGG | - | chr4_4:30980913-30980932 | Msa0677430:intron | 40.0% | |
| TGTCGATGTCTATGTTTCGT+AGG | - | chr4_4:30981027-30981046 | Msa0677430:intron | 40.0% | |
| !! | GAACTTGGAAGCATTTCCTT+TGG | + | chr4_4:30981109-30981128 | None:intergenic | 40.0% |
| ACAGTGATTCTGATCTTGTC+CGG | - | chr4_4:30981423-30981442 | Msa0677430:intron | 40.0% | |
| ! | AAGCGTTCTTGTTTGGGTTT+GGG | + | chr4_4:30981483-30981502 | None:intergenic | 40.0% |
| ! | AAAGCGTTCTTGTTTGGGTT+TGG | + | chr4_4:30981484-30981503 | None:intergenic | 40.0% |
| !!! | CCCAAACAAGAACGCTTTTT+TGG | - | chr4_4:30981486-30981505 | Msa0677430:intron | 40.0% |
| !! | TTTTTAGGGAATACCCTACC+TGG | - | chr4_4:30981568-30981587 | Msa0677430:intron | 40.0% |
| GTAAGTTAATGCAACCAGGT+AGG | + | chr4_4:30981585-30981604 | None:intergenic | 40.0% | |
| ! | CCACCATTTGCATTTGTTGA+TGG | + | chr4_4:30982695-30982714 | None:intergenic | 40.0% |
| CCATCAACAAATGCAAATGG+TGG | - | chr4_4:30982692-30982711 | Msa0677430:intron | 40.0% | |
| TCATCATTTGAGTCAGTAGC+TGG | - | chr4_4:30982717-30982736 | Msa0677430:intron | 40.0% | |
| ! | TTACTGCTACTTGTGGTTGT+TGG | + | chr4_4:30982876-30982895 | None:intergenic | 40.0% |
| ! | CAAAAGAACAAATCTGGAGC+TGG | - | chr4_4:30982957-30982976 | Msa0677430:intron | 40.0% |
| AACCTCAACAACAGCATGTT+TGG | - | chr4_4:30983003-30983022 | Msa0677430:intron | 40.0% | |
| AGAATTGCCACTGATCTTTC+AGG | + | chr4_4:30983047-30983066 | None:intergenic | 40.0% | |
| CAGTGGCAATTCTTAAAGCT+TGG | - | chr4_4:30983054-30983073 | Msa0677430:intron | 40.0% | |
| ! | CCAAACTGGCTCAGATAAAA+CGG | - | chr4_4:30983343-30983362 | Msa0677430:intron | 40.0% |
| ! | CAAACTGGCTCAGATAAAAC+GGG | - | chr4_4:30983344-30983363 | Msa0677430:intron | 40.0% |
| !!! | GTTTTTTCTAGGTTTTCGCG+AGG | + | chr4_4:30983585-30983604 | None:intergenic | 40.0% |
| CTAGAAATCTCCACAGTTTG+AGG | - | chr4_4:30983666-30983685 | Msa0677430:CDS | 40.0% | |
| TGAAAAAAGCAGTAGGGAGT+AGG | - | chr4_4:30983719-30983738 | Msa0677430:CDS | 40.0% | |
| TCTTCTGCTGTACTCAATGA+CGG | + | chr4_4:30983998-30984017 | None:intergenic | 40.0% | |
| AAATGCTCCATTAAGGCCTA+TGG | + | chr4_4:30984058-30984077 | None:intergenic | 40.0% | |
| TTTCGCATCAGTGTTGTCAA+TGG | + | chr4_4:30984105-30984124 | None:intergenic | 40.0% | |
| TGTGTCGAAGCAAAGCAAAA+TGG | - | chr4_4:30984271-30984290 | Msa0677430:CDS | 40.0% | |
| GTGTCGAAGCAAAGCAAAAT+GGG | - | chr4_4:30984272-30984291 | Msa0677430:CDS | 40.0% | |
| ! | AAGCAAAGCAAAATGGGTTC+TGG | - | chr4_4:30984278-30984297 | Msa0677430:CDS | 40.0% |
| !! | TTGTTTTCAGGCTGACGAAA+GGG | + | chr4_4:30984374-30984393 | None:intergenic | 40.0% |
| TTTCGTCAGCCTGAAAACAA+GGG | - | chr4_4:30984374-30984393 | Msa0677430:CDS | 40.0% | |
| TCCCATATGTCCTTATCCAT+TGG | - | chr4_4:30984417-30984436 | Msa0677430:CDS | 40.0% | |
| CCCAATGGATAAGGACATAT+GGG | + | chr4_4:30984421-30984440 | None:intergenic | 40.0% | |
| CCCATATGTCCTTATCCATT+GGG | - | chr4_4:30984418-30984437 | Msa0677430:CDS | 40.0% | |
| ACCCAATGGATAAGGACATA+TGG | + | chr4_4:30984422-30984441 | None:intergenic | 40.0% | |
| ! | TGTGGATTACCCAATGGATA+AGG | + | chr4_4:30984430-30984449 | None:intergenic | 40.0% |
| AGCGGGTCAGTTTCTATAAA+GGG | + | chr4_4:30984527-30984546 | None:intergenic | 40.0% | |
| ! | TAGCGGGTCAGTTTCTATAA+AGG | + | chr4_4:30984528-30984547 | None:intergenic | 40.0% |
| TTTAGTCGTAACAACCTGAG+AGG | + | chr4_4:30984565-30984584 | None:intergenic | 40.0% | |
| ! | CTCAGGTTGTTACGACTAAA+AGG | - | chr4_4:30984565-30984584 | Msa0677430:CDS | 40.0% |
| TGATCTGGGAATAATCCCAA+GGG | + | chr4_4:30984615-30984634 | None:intergenic | 40.0% | |
| ATGATCTGGGAATAATCCCA+AGG | + | chr4_4:30984616-30984635 | None:intergenic | 40.0% | |
| !!! | CTGAGTAGAGCACTAGTTTT+TGG | + | chr4_4:30984654-30984673 | None:intergenic | 40.0% |
| TACTCAGCATTATCGCTAGT+AGG | - | chr4_4:30984667-30984686 | Msa0677430:intron | 40.0% | |
| ACTCAGCATTATCGCTAGTA+GGG | - | chr4_4:30984668-30984687 | Msa0677430:intron | 40.0% | |
| GTTCTTTGGATCACTTGTCT+AGG | - | chr4_4:30984721-30984740 | Msa0677430:intron | 40.0% | |
| CTAGGTTGTCAAACACGTAT+AGG | - | chr4_4:30984739-30984758 | Msa0677430:intron | 40.0% | |
| !!! | ACGTATAGGAGTTTTGGACA+CGG | - | chr4_4:30984753-30984772 | Msa0677430:intron | 40.0% |
| AGAAACAATGGATGCTTTGC+AGG | - | chr4_4:30984848-30984867 | Msa0677430:five_prime_UTR | 40.0% | |
| CTTTGCAGGTAATACATACC+AGG | - | chr4_4:30984862-30984881 | Msa0677430:five_prime_UTR | 40.0% | |
| CCATTCATGCCAAGTAACTT+GGG | + | chr4_4:30984912-30984931 | None:intergenic | 40.0% | |
| CCCACTCTTATTCGATAAGT+TGG | + | chr4_4:30985042-30985061 | None:intergenic | 40.0% | |
| AGGGTAGTTGGTCAAATACA+AGG | - | chr4_4:30985067-30985086 | Msa0677430:intron | 40.0% | |
| GTAGTTGGTCAAATACAAGG+AGG | - | chr4_4:30985070-30985089 | Msa0677430:intron | 40.0% | |
| !!! | CCGCTCTTTTTTTCTCTTCT+GGG | + | chr4_4:30985101-30985120 | None:intergenic | 40.0% |
| CCCAGAAGAGAAAAAAAGAG+CGG | - | chr4_4:30985098-30985117 | Msa0677430:intron | 40.0% | |
| TAGCAAACCAAGAGTTTGGA+AGG | - | chr4_4:30985131-30985150 | Msa0677430:intron | 40.0% | |
| AGCTTGAGAAGAGTCAATTG+AGG | - | chr4_4:30985157-30985176 | Msa0677430:intron | 40.0% | |
| TTGAGGAAAAATGTGGGACA+AGG | - | chr4_4:30985174-30985193 | Msa0677430:intron | 40.0% | |
| CTCATGTGCTACATCATTTG+CGG | + | chr4_4:30985235-30985254 | None:intergenic | 40.0% | |
| GCAAAGATTTCCAGCAACTT+TGG | - | chr4_4:30985255-30985274 | Msa0677430:five_prime_UTR | 40.0% | |
| AGATAGGAAATGGAAGTGGG+AGG | + | chr4_4:30976444-30976463 | None:intergenic | 45.0% | |
| GCTAGACGATACCATAAAGC+CGG | - | chr4_4:30976818-30976837 | Msa0677430:intron | 45.0% | |
| TACCATAAAGCCGGTTGTAG+AGG | - | chr4_4:30976827-30976846 | Msa0677430:intron | 45.0% | |
| ! | ATCCTCTACAACCGGCTTTA+TGG | + | chr4_4:30976832-30976851 | None:intergenic | 45.0% |
| AATCATCATGGCATTTGGGG+AGG | - | chr4_4:30977541-30977560 | Msa0677430:intron | 45.0% | |
| CGAAGATGAAGTTGAGGGTT+TGG | + | chr4_4:30977725-30977744 | None:intergenic | 45.0% | |
| TAGCCAGTAAATGGTCCAAG+TGG | + | chr4_4:30977841-30977860 | None:intergenic | 45.0% | |
| !! | GTTGGTTGTTCTAGTTCTGG+TGG | - | chr4_4:30977991-30978010 | Msa0677430:intron | 45.0% |
| !! | TCTGGTGGTGTTGATGAAAG+TGG | - | chr4_4:30978006-30978025 | Msa0677430:intron | 45.0% |
| !! | GCCTTATTCTTTTGGCACTC+TGG | + | chr4_4:30978165-30978184 | None:intergenic | 45.0% |
| GGGCACAAGTTAACACTATG+CGG | + | chr4_4:30978260-30978279 | None:intergenic | 45.0% | |
| !!! | TTTTTAGGTTTTGGGGGTGG+GGG | - | chr4_4:30978957-30978976 | Msa0677430:CDS | 45.0% |
| AGTGCCTATTATCCCTCCTA+GGG | - | chr4_4:30979282-30979301 | Msa0677430:intron | 45.0% | |
| TATCCCCTAGGAGGGATAAT+AGG | + | chr4_4:30979289-30979308 | None:intergenic | 45.0% | |
| AAGTGTGTGATCTAGCCACT+AGG | + | chr4_4:30980073-30980092 | None:intergenic | 45.0% | |
| ACCAACTGAGCTACACTTAC+GGG | - | chr4_4:30980165-30980184 | Msa0677430:intron | 45.0% | |
| CACACATACACACACTCACA+TGG | - | chr4_4:30980377-30980396 | Msa0677430:intron | 45.0% | |
| ! | CTATTTTCTGTCTGTGGGGT+TGG | - | chr4_4:30980466-30980485 | Msa0677430:intron | 45.0% |
| TGGGGTTGGACATAACATAG+AGG | - | chr4_4:30980480-30980499 | Msa0677430:intron | 45.0% | |
| ! | GTCTTGGATGTTGACTGTGT+GGG | - | chr4_4:30980618-30980637 | Msa0677430:intron | 45.0% |
| ! | TCTTGGATGTTGACTGTGTG+GGG | - | chr4_4:30980619-30980638 | Msa0677430:intron | 45.0% |
| TGGGAAACAATTGCACGACA+TGG | + | chr4_4:30980665-30980684 | None:intergenic | 45.0% | |
| TAAACCAGTGCACAGTCCAT+AGG | + | chr4_4:30980873-30980892 | None:intergenic | 45.0% | |
| TAAAGCTCAGCCACATCTTG+TGG | + | chr4_4:30981342-30981361 | None:intergenic | 45.0% | |
| CAAGATGTGGCTGAGCTTTA+AGG | - | chr4_4:30981342-30981361 | Msa0677430:intron | 45.0% | |
| TAACACACAGACATCAGACG+TGG | + | chr4_4:30982555-30982574 | None:intergenic | 45.0% | |
| CTCCAAACATGCTGTTGTTG+AGG | + | chr4_4:30983008-30983027 | None:intergenic | 45.0% | |
| CTCAACAACAGCATGTTTGG+AGG | - | chr4_4:30983006-30983025 | Msa0677430:intron | 45.0% | |
| ! | TCTTTCAGGTAACCCTCTCT+GGG | + | chr4_4:30983033-30983052 | None:intergenic | 45.0% |
| ! | ATCTTTCAGGTAACCCTCTC+TGG | + | chr4_4:30983034-30983053 | None:intergenic | 45.0% |
| AGGGTTACCTGAAAGATCAG+TGG | - | chr4_4:30983037-30983056 | Msa0677430:intron | 45.0% | |
| AAATTATACTCCCTCCGTCC+CGG | - | chr4_4:30983139-30983158 | Msa0677430:intron | 45.0% | |
| ATGGATCAGATATTCCGGGA+CGG | + | chr4_4:30983156-30983175 | None:intergenic | 45.0% | |
| ! | CCGTTTTATCTGAGCCAGTT+TGG | + | chr4_4:30983346-30983365 | None:intergenic | 45.0% |
| TTCTGCTGTACTCAATGACG+GGG | + | chr4_4:30983996-30984015 | None:intergenic | 45.0% | |
| CTTCTGCTGTACTCAATGAC+GGG | + | chr4_4:30983997-30984016 | None:intergenic | 45.0% | |
| !! | GGGTTCTGGACCTTTATGTT+TGG | - | chr4_4:30984292-30984311 | Msa0677430:CDS | 45.0% |
| !! | TGTTTTCAGGCTGACGAAAG+GGG | + | chr4_4:30984373-30984392 | None:intergenic | 45.0% |
| !! | CTTGTTTTCAGGCTGACGAA+AGG | + | chr4_4:30984375-30984394 | None:intergenic | 45.0% |
| CTTTCGTCAGCCTGAAAACA+AGG | - | chr4_4:30984373-30984392 | Msa0677430:CDS | 45.0% | |
| !!! | GCGCTTTAACCCTTGTTTTC+AGG | + | chr4_4:30984386-30984405 | None:intergenic | 45.0% |
| TGGATAAGGACATATGGGAG+CGG | + | chr4_4:30984416-30984435 | None:intergenic | 45.0% | |
| ! | CAGTTCTGTGGATTACCCAA+TGG | + | chr4_4:30984436-30984455 | None:intergenic | 45.0% |
| TATCTGTTCGCTCAGTTCTG+TGG | + | chr4_4:30984448-30984467 | None:intergenic | 45.0% | |
| GGGTCAGTTTCTATAAAGGG+GGG | + | chr4_4:30984524-30984543 | None:intergenic | 45.0% | |
| CGGGTCAGTTTCTATAAAGG+GGG | + | chr4_4:30984525-30984544 | None:intergenic | 45.0% | |
| GCGGGTCAGTTTCTATAAAG+GGG | + | chr4_4:30984526-30984545 | None:intergenic | 45.0% | |
| !!! | CGTATAGGAGTTTTGGACAC+GGG | - | chr4_4:30984754-30984773 | Msa0677430:intron | 45.0% |
| CATACCAGGCCACAAGAAAA+TGG | - | chr4_4:30984876-30984895 | Msa0677430:five_prime_UTR | 45.0% | |
| ! | CAAACCATTTTCTTGTGGCC+TGG | + | chr4_4:30984883-30984902 | None:intergenic | 45.0% |
| CCCAAGTTACTTGGCATGAA+TGG | - | chr4_4:30984909-30984928 | Msa0677430:five_prime_UTR | 45.0% | |
| GCCATTCATGCCAAGTAACT+TGG | + | chr4_4:30984913-30984932 | None:intergenic | 45.0% | |
| TCGATAAATTCGCGGTGAGA+TGG | - | chr4_4:30984949-30984968 | Msa0677430:five_prime_UTR | 45.0% | |
| TCGAATAAGAGTGGGGAACT+AGG | - | chr4_4:30985047-30985066 | Msa0677430:intron | 45.0% | |
| CGAATAAGAGTGGGGAACTA+GGG | - | chr4_4:30985048-30985067 | Msa0677430:intron | 45.0% | |
| !!! | GCCGCTCTTTTTTTCTCTTC+TGG | + | chr4_4:30985102-30985121 | None:intergenic | 45.0% |
| GAAAAAAAGAGCGGCGAAGA+AGG | - | chr4_4:30985107-30985126 | Msa0677430:intron | 45.0% | |
| AGGCTAGCAAACCAAGAGTT+TGG | - | chr4_4:30985127-30985146 | Msa0677430:intron | 45.0% | |
| AGCTTCACCTTCCAAACTCT+TGG | + | chr4_4:30985141-30985160 | None:intergenic | 45.0% | |
| !! | AGCAACTGACTTTTCGACAG+TGG | - | chr4_4:30985200-30985219 | Msa0677430:intron | 45.0% |
| CGCAAATGATGTAGCACATG+AGG | - | chr4_4:30985233-30985252 | Msa0677430:five_prime_UTR | 45.0% | |
| TCTGTGAACTCCAAAGTTGC+TGG | + | chr4_4:30985268-30985287 | None:intergenic | 45.0% | |
| !! | ATTATTATTATTATTATCAA+AGG | + | chr4_4:30977941-30977960 | None:intergenic | 5.0% |
| AAGTGGGAGGAAGCAAAGCA+AGG | + | chr4_4:30976431-30976450 | None:intergenic | 50.0% | |
| !! | AGAGAGATCAAGGGCTAGCT+AGG | - | chr4_4:30976664-30976683 | Msa0677430:intron | 50.0% |
| !! | GAGAGATCAAGGGCTAGCTA+GGG | - | chr4_4:30976665-30976684 | Msa0677430:intron | 50.0% |
| AGCTTGCAGGTTGTGGTGTT+TGG | + | chr4_4:30977225-30977244 | None:intergenic | 50.0% | |
| ATCATGGCATTTGGGGAGGT+GGG | - | chr4_4:30977545-30977564 | Msa0677430:intron | 50.0% | |
| GGTCCACTTGGACCATTTAC+TGG | - | chr4_4:30977835-30977854 | Msa0677430:intron | 50.0% | |
| !! | GAGAATAGTGGTGGTGATGG+AGG | - | chr4_4:30978096-30978115 | Msa0677430:intron | 50.0% |
| !! | AGTGGTGGTGATGGAGGAAT+TGG | - | chr4_4:30978102-30978121 | Msa0677430:intron | 50.0% |
| !! | GTGGTGGTGATGGAGGAATT+GGG | - | chr4_4:30978103-30978122 | Msa0677430:intron | 50.0% |
| GAGTGCCTATTATCCCTCCT+AGG | - | chr4_4:30979281-30979300 | Msa0677430:intron | 50.0% | |
| GTGCCTATTATCCCTCCTAG+GGG | - | chr4_4:30979283-30979302 | Msa0677430:intron | 50.0% | |
| ! | CTCACGTGGATCTCACGTTT+TGG | + | chr4_4:30979607-30979626 | None:intergenic | 50.0% |
| GTGTGGAGAAGTGGGGAATT+CGG | - | chr4_4:30980101-30980120 | Msa0677430:intron | 50.0% | |
| TGTGGAGAAGTGGGGAATTC+GGG | - | chr4_4:30980102-30980121 | Msa0677430:intron | 50.0% | |
| TGGACAATATTTGCAGGGGC+CGG | + | chr4_4:30980137-30980156 | None:intergenic | 50.0% | |
| GCCCCTGCAAATATTGTCCA+TGG | - | chr4_4:30980137-30980156 | Msa0677430:intron | 50.0% | |
| !! | AGCTCAGTTGGTAGCTACCA+TGG | + | chr4_4:30980157-30980176 | None:intergenic | 50.0% |
| TCCCGTAAGTGTAGCTCAGT+TGG | + | chr4_4:30980169-30980188 | None:intergenic | 50.0% | |
| ! | GGTCTTGGATGTTGACTGTG+TGG | - | chr4_4:30980617-30980636 | Msa0677430:intron | 50.0% |
| ACGGCTTAATGCAGCTGATG+TGG | - | chr4_4:30981250-30981269 | Msa0677430:intron | 50.0% | |
| CGACATTGCAACCGCGATAA+CGG | + | chr4_4:30981276-30981295 | None:intergenic | 50.0% | |
| CAGTTGTGCACCACAAGATG+TGG | - | chr4_4:30981329-30981348 | Msa0677430:intron | 50.0% | |
| !! | TCAGACGTGGCATTGACACA+CGG | + | chr4_4:30982542-30982561 | None:intergenic | 50.0% |
| ! | CTTTCAGGTAACCCTCTCTG+GGG | + | chr4_4:30983032-30983051 | None:intergenic | 50.0% |
| ATCAGATATTCCGGGACGGA+GGG | + | chr4_4:30983152-30983171 | None:intergenic | 50.0% | |
| CTGGCTCAGATAAAACGGGA+CGG | - | chr4_4:30983348-30983367 | Msa0677430:intron | 50.0% | |
| CTCAGATAAAACGGGACGGA+AGG | - | chr4_4:30983352-30983371 | Msa0677430:intron | 50.0% | |
| ! | TTCTAGGTTTTCGCGAGGTC+CGG | + | chr4_4:30983580-30983599 | None:intergenic | 50.0% |
| TGTGCTAGAGCCTCAAACTG+TGG | + | chr4_4:30983679-30983698 | None:intergenic | 50.0% | |
| TCTGCTGTACTCAATGACGG+GGG | + | chr4_4:30983995-30984014 | None:intergenic | 50.0% | |
| ! | TCAGTGTTGTCAATGGCGGA+AGG | + | chr4_4:30984098-30984117 | None:intergenic | 50.0% |
| CGCATCAGTGTTGTCAATGG+CGG | + | chr4_4:30984102-30984121 | None:intergenic | 50.0% | |
| !! | GTTTTCAGGCTGACGAAAGG+GGG | + | chr4_4:30984372-30984391 | None:intergenic | 50.0% |
| ACAGATACAGATAGAGCCCC+AGG | - | chr4_4:30984461-30984480 | Msa0677430:CDS | 50.0% | |
| AGGTGGTTTCCTGAGCTTAG+CGG | + | chr4_4:30984545-30984564 | None:intergenic | 50.0% | |
| AGTCGTAACAACCTGAGAGG+TGG | + | chr4_4:30984562-30984581 | None:intergenic | 50.0% | |
| CATCATGGCATTTGGGGAGG+TGG | - | chr4_4:30977544-30977563 | Msa0677430:intron | 55.0% | |
| GTGGAGAAGTGGGGAATTCG+GGG | - | chr4_4:30980103-30980122 | Msa0677430:intron | 55.0% | |
| GACAATATTTGCAGGGGCCG+GGG | + | chr4_4:30980135-30980154 | None:intergenic | 55.0% | |
| GGACAATATTTGCAGGGGCC+GGG | + | chr4_4:30980136-30980155 | None:intergenic | 55.0% | |
| ! | TCCACCTATGGACTGTGCAC+TGG | - | chr4_4:30980866-30980885 | Msa0677430:intron | 55.0% |
| ACCAGTGCACAGTCCATAGG+TGG | + | chr4_4:30980870-30980889 | None:intergenic | 55.0% | |
| AGCTGATGTGGCCGTTATCG+CGG | - | chr4_4:30981262-30981281 | Msa0677430:intron | 55.0% | |
| ATGTTTGGAGGCCCCAGAGA+GGG | - | chr4_4:30983018-30983037 | Msa0677430:intron | 55.0% | |
| GATCAGATATTCCGGGACGG+AGG | + | chr4_4:30983153-30983172 | None:intergenic | 55.0% | |
| GAAACTGACCCGCTAAGCTC+AGG | - | chr4_4:30984533-30984552 | Msa0677430:CDS | 55.0% | |
| GGTGGTTTCCTGAGCTTAGC+GGG | + | chr4_4:30984544-30984563 | None:intergenic | 55.0% | |
| AGCTCAGGAAACCACCTCTC+AGG | - | chr4_4:30984548-30984567 | Msa0677430:CDS | 55.0% | |
| ! | TTTTGGACACGGGCGAGTGT+CGG | - | chr4_4:30984764-30984783 | Msa0677430:intron | 55.0% |
| GAGTGGGGAACTAGGGTAGT+TGG | - | chr4_4:30985055-30985074 | Msa0677430:intron | 55.0% | |
| !!! | TTAGGTTTTGGGGGTGGGGG+TGG | - | chr4_4:30978960-30978979 | Msa0677430:CDS | 60.0% |
| GGAATTCGGGGTTCGAACCC+CGG | - | chr4_4:30980115-30980134 | Msa0677430:intron | 60.0% | |
| CATGTTTGGAGGCCCCAGAG+AGG | - | chr4_4:30983017-30983036 | Msa0677430:intron | 60.0% | |
| GTAAGAAGGGAAGCCCGCCA+TGG | - | chr4_4:30984027-30984046 | Msa0677430:CDS | 60.0% | |
| AGAGCCCCAGGCGAGATATC+TGG | - | chr4_4:30984473-30984492 | Msa0677430:CDS | 60.0% | |
| GAGCCCCAGGCGAGATATCT+GGG | - | chr4_4:30984474-30984493 | Msa0677430:CDS | 60.0% | |
| AGCCCCAGGCGAGATATCTG+GGG | - | chr4_4:30984475-30984494 | Msa0677430:CDS | 60.0% | |
| CACCCCAGATATCTCGCCTG+GGG | + | chr4_4:30984480-30984499 | None:intergenic | 60.0% | |
| CCACCCCAGATATCTCGCCT+GGG | + | chr4_4:30984481-30984500 | None:intergenic | 60.0% | |
| TCCACCCCAGATATCTCGCC+TGG | + | chr4_4:30984482-30984501 | None:intergenic | 60.0% | |
| AGAAGGGAAGCCCGCCATGG+CGG | - | chr4_4:30984030-30984049 | Msa0677430:CDS | 65.0% | |
| TAAGGCCTATGGCGCCGCCA+TGG | + | chr4_4:30984047-30984066 | None:intergenic | 65.0% | |
| GGCGGCGCCATAGGCCTTAA+TGG | - | chr4_4:30984048-30984067 | Msa0677430:CDS | 65.0% | |
| GGTACCACGTGAGCAGCACG+TGG | - | chr4_4:30984343-30984362 | Msa0677430:CDS | 65.0% | |
| CCCAGGCGAGATATCTGGGG+TGG | - | chr4_4:30984478-30984497 | Msa0677430:CDS | 65.0% | |
| !! | ACACGGGCGAGTGTCGGACA+TGG | - | chr4_4:30984770-30984789 | Msa0677430:intron | 65.0% |
| ! | GCGTCCACGTGCTGCTCACG+TGG | + | chr4_4:30984350-30984369 | None:intergenic | 70.0% |
| GCCTATGGCGCCGCCATGGC+GGG | + | chr4_4:30984043-30984062 | None:intergenic | 75.0% | |
| GGCCTATGGCGCCGCCATGG+CGG | + | chr4_4:30984044-30984063 | None:intergenic | 75.0% | |
| ! | GCCCGCCATGGCGGCGCCAT+AGG | - | chr4_4:30984039-30984058 | Msa0677430:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 30976394 | 30985320 | 30976394 | ID=Msa0677430;Name=Msa0677430 |
| chr4_4 | mRNA | 30976394 | 30985320 | 30976394 | ID=Msa0677430-mRNA-1;Parent=Msa0677430;Name=Msa0677430-mRNA-1;_AED=0.06;_eAED=0.06;_QI=305|0.75|0.6|0.8|0.5|0.4|5|0|585 |
| chr4_4 | exon | 30976394 | 30976625 | 30976394 | ID=Msa0677430-mRNA-1:exon:7750;Parent=Msa0677430-mRNA-1 |
| chr4_4 | exon | 30978615 | 30979045 | 30978615 | ID=Msa0677430-mRNA-1:exon:7749;Parent=Msa0677430-mRNA-1 |
| chr4_4 | exon | 30983505 | 30984637 | 30983505 | ID=Msa0677430-mRNA-1:exon:7748;Parent=Msa0677430-mRNA-1 |
| chr4_4 | exon | 30984810 | 30984970 | 30984810 | ID=Msa0677430-mRNA-1:exon:7747;Parent=Msa0677430-mRNA-1 |
| chr4_4 | exon | 30985215 | 30985320 | 30985215 | ID=Msa0677430-mRNA-1:exon:7746;Parent=Msa0677430-mRNA-1 |
| chr4_4 | five_prime_UTR | 30985215 | 30985320 | 30985215 | ID=Msa0677430-mRNA-1:five_prime_utr;Parent=Msa0677430-mRNA-1 |
| chr4_4 | five_prime_UTR | 30984810 | 30984970 | 30984810 | ID=Msa0677430-mRNA-1:five_prime_utr;Parent=Msa0677430-mRNA-1 |
| chr4_4 | five_prime_UTR | 30984600 | 30984637 | 30984600 | ID=Msa0677430-mRNA-1:five_prime_utr;Parent=Msa0677430-mRNA-1 |
| chr4_4 | CDS | 30983505 | 30984599 | 30983505 | ID=Msa0677430-mRNA-1:cds;Parent=Msa0677430-mRNA-1 |
| chr4_4 | CDS | 30978615 | 30979045 | 30978615 | ID=Msa0677430-mRNA-1:cds;Parent=Msa0677430-mRNA-1 |
| chr4_4 | CDS | 30976394 | 30976625 | 30976394 | ID=Msa0677430-mRNA-1:cds;Parent=Msa0677430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
