AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0546790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0546790 MtrunA17_Chr4g0028701 90.698 688 33 8 1 679 1 666 0.0 1153
Msa0546790 MtrunA17_Chr2g0327021 40.416 673 263 28 48 645 3 612 2.12e-121 375
Msa0546790 MtrunA17_Chr7g0240371 40.783 434 183 11 238 668 123 485 2.39e-86 280
Msa0546790 MtrunA17_Chr4g0008591 47.866 328 101 10 245 572 189 446 3.83e-80 266
Msa0546790 MtrunA17_Chr7g0267481 37.002 427 197 10 157 583 99 453 3.34e-68 235
Msa0546790 MtrunA17_Chr1g0155681 36.165 412 187 10 255 641 173 533 6.87e-66 228
Msa0546790 MtrunA17_Chr8g0387321 43.175 315 127 6 232 546 170 432 1.07e-65 228
Msa0546790 MtrunA17_Chr4g0025521 39.877 326 146 6 252 575 217 494 3.54e-65 228
Msa0546790 MtrunA17_Chr5g0403251 50.000 228 95 4 343 570 402 610 1.18e-64 228
Msa0546790 MtrunA17_Chr1g0177751 43.537 294 120 5 251 544 160 407 6.00e-64 224
Msa0546790 MtrunA17_Chr3g0141941 40.323 310 137 3 248 557 158 419 7.51e-62 215
Msa0546790 MtrunA17_Chr3g0141931 38.854 314 144 8 249 562 162 427 1.60e-57 201
Msa0546790 MtrunA17_Chr1g0151681 27.273 462 252 13 148 580 115 521 7.45e-39 150
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0546790 AT2G27990.1 33.986 715 302 26 1 679 4 584 1.70e-91 296
Msa0546790 AT5G02030.1 42.708 384 129 8 188 554 110 419 5.39e-79 263
Msa0546790 AT4G36870.2 45.151 299 119 7 252 550 312 565 1.92e-66 233
Msa0546790 AT4G36870.1 45.151 299 119 7 252 550 312 565 1.92e-66 233
Msa0546790 AT4G34610.2 53.081 211 76 3 343 553 197 384 5.14e-66 227
Msa0546790 AT4G34610.4 53.081 211 76 3 343 553 197 384 5.14e-66 227
Msa0546790 AT4G34610.3 53.081 211 76 3 343 553 197 384 5.14e-66 227
Msa0546790 AT4G34610.1 53.081 211 76 3 343 553 197 384 5.14e-66 227
Msa0546790 AT1G19700.1 35.874 446 184 15 147 553 39 421 9.64e-66 226
Msa0546790 AT1G19700.3 35.874 446 184 15 147 553 39 421 9.64e-66 226
Msa0546790 AT1G19700.5 35.874 446 184 15 147 553 39 421 9.64e-66 226
Msa0546790 AT1G19700.4 35.874 446 184 15 147 553 39 421 9.64e-66 226
Msa0546790 AT1G19700.2 35.874 446 184 15 147 553 39 421 9.64e-66 226
Msa0546790 AT1G75410.1 34.152 448 208 9 160 577 53 443 1.10e-65 226
Msa0546790 AT1G75410.2 34.152 448 208 9 160 577 53 443 1.10e-65 226
Msa0546790 AT2G16400.1 33.185 449 209 9 247 679 109 482 5.15e-64 220
Msa0546790 AT2G35940.3 53.731 201 77 3 344 544 262 446 1.44e-63 224
Msa0546790 AT2G35940.1 53.731 201 77 3 344 544 262 446 1.44e-63 224
Msa0546790 AT2G35940.2 53.731 201 77 3 344 544 262 446 1.44e-63 224
Msa0546790 AT2G27220.1 39.088 307 103 8 244 550 73 295 2.44e-57 201
Msa0546790 AT2G27220.3 39.088 307 103 8 244 550 73 295 2.44e-57 201
Msa0546790 AT5G41410.1 41.311 305 142 7 253 555 194 463 1.89e-56 202
Msa0546790 AT2G27220.2 36.923 325 103 9 244 550 73 313 9.47e-54 191
Msa0546790 AT2G23760.4 36.901 355 128 7 248 550 233 543 9.71e-54 196
Msa0546790 AT4G36870.4 42.500 280 116 7 252 531 312 546 5.59e-53 192
Msa0546790 AT4G36870.3 42.086 278 116 7 252 529 312 544 1.30e-51 188
Msa0546790 AT1G75410.3 32.663 398 184 8 160 530 53 393 1.25e-50 181
Msa0546790 AT1G75430.1 38.996 259 128 5 320 568 52 290 1.33e-49 175
Msa0546790 AT2G27990.2 30.427 539 253 20 1 509 4 450 1.92e-48 177
Msa0546790 AT4G32980.1 28.212 358 185 8 193 550 154 439 2.77e-36 142
Msa0546790 AT4G32980.2 28.212 358 185 8 193 550 154 439 2.77e-36 142
Msa0546790 AT1G75430.2 34.010 197 103 4 320 509 52 228 1.23e-24 105

Find 184 sgRNAs with CRISPR-Local

Find 564 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTCTACAACCGACTTTA+TGG 0.166751 4_1:+39117734 None:intergenic
AAACTCGAGCGTTAAGAATT+TGG 0.167949 4_1:+39117711 None:intergenic
ATTTAAATTTAATGTGATAT+TGG 0.186069 4_1:-39108514 Msa0546790:three_prime_UTR
ATCTTTCAGGTAACCCTCTC+TGG 0.199963 4_1:+39111011 None:intergenic
TATATATAACACAGGTTAAT+TGG 0.214505 4_1:-39117791 Msa0546790:five_prime_UTR
ATCACTGTTGAATCCATATT+TGG 0.216643 4_1:+39109191 None:intergenic
AAGTATAGTAGTTGGAAATT+TGG 0.228982 4_1:-39117471 Msa0546790:five_prime_UTR
AGAATTGCCACTGATCTTTC+AGG 0.234528 4_1:+39110998 None:intergenic
GGTCCACTTGGACCATTTAC+TGG 0.239951 4_1:-39116727 Msa0546790:CDS
TGTTAGGAAACTCTTGATTC+TGG 0.254536 4_1:+39117391 None:intergenic
CTACTAGTAGTAGTGGTTTA+AGG 0.267636 4_1:-39116756 Msa0546790:CDS
TTTAAATTTAATGTGATATT+GGG 0.269604 4_1:-39108513 Msa0546790:three_prime_UTR
GAAGGAAATTACACTAATTT+CGG 0.276513 4_1:-39117769 Msa0546790:five_prime_UTR
TCATGAAATACAGGTATAAT+AGG 0.277260 4_1:+39116982 None:intergenic
AATTGTTCAATGTTGTTGTT+AGG 0.282548 4_1:+39117375 None:intergenic
GTAATTGAGCCTTATTCTTT+TGG 0.283413 4_1:+39116398 None:intergenic
TAATGAATCATCATGGCATT+TGG 0.286737 4_1:-39117026 Msa0546790:CDS
AACCAACAACACTAATTTCT+AGG 0.290192 4_1:-39116786 Msa0546790:CDS
CCACCATTTGCATTTGTTGA+TGG 0.290812 4_1:+39111356 None:intergenic
TGCATGTTGCACAACAAATT+AGG 0.293946 4_1:-39117431 Msa0546790:CDS
TGATCAGATTACACCAAATA+TGG 0.305163 4_1:-39109204 Msa0546790:CDS
TCCCTAGAAATTAGTGTTGT+TGG 0.305981 4_1:+39116784 None:intergenic
AGTGGTGGTGATGGAGGAAT+TGG 0.314187 4_1:-39116463 Msa0546790:CDS
TGAAAAGCAGTTTCAGTGTT+TGG 0.318681 4_1:-39109327 Msa0546790:CDS
CGAAGATGAAGTTGAGGGTT+TGG 0.326161 4_1:+39116840 None:intergenic
AAACTTACATGTCAAGTATT+AGG 0.326456 4_1:-39111217 Msa0546790:CDS
AACCTCAACAACAGCATGTT+TGG 0.326715 4_1:-39111039 Msa0546790:CDS
AATGAATCATCATGGCATTT+GGG 0.328650 4_1:-39117025 Msa0546790:CDS
ACCAGAGTGCCAAAAGAATA+AGG 0.328721 4_1:-39116407 Msa0546790:CDS
CAGTTTCAGTGTTTGGAAAT+GGG 0.336837 4_1:-39109320 Msa0546790:CDS
GCAGTTTCAGTGTTTGGAAA+TGG 0.338021 4_1:-39109321 Msa0546790:CDS
TTGGAAATGGGGTCATCTTC+AGG 0.341648 4_1:-39109308 Msa0546790:CDS
ATGAAAATCAAGCAAATTTG+TGG 0.348791 4_1:-39116963 Msa0546790:CDS
GCAAAAGGTAGTAGTAATTC+AGG 0.350990 4_1:-39116529 Msa0546790:CDS
GTAGACCTTAGACATCAATT+TGG 0.356780 4_1:-39109068 Msa0546790:CDS
AGCCTGCAGGTTGTGGTGTT+TGG 0.357501 4_1:+39117340 None:intergenic
ATAAATAATAGGTATCAAAT+TGG 0.363771 4_1:-39109478 Msa0546790:intron
TGTTTGTGTGGAGGATAGAT+AGG 0.365834 4_1:+39118135 None:intergenic
CAATGTTTCATTGTCGCGTT+CGG 0.370295 4_1:-39108653 Msa0546790:three_prime_UTR
ATTTCCAACTACTATACTTA+AGG 0.379280 4_1:+39117475 None:intergenic
AACTTCTACCTTTGATTCTC+CGG 0.385907 4_1:+39117672 None:intergenic
TTCACATAGTACTTCAGAAA+TGG 0.389982 4_1:-39117055 Msa0546790:CDS
AGCTACACCATACATTTCAT+TGG 0.390026 4_1:-39111299 Msa0546790:CDS
TCCTTTACACAGAAACCCTT+TGG 0.393027 4_1:-39117199 Msa0546790:CDS
GGTTCATCTTCAATGTTGTA+TGG 0.394873 4_1:-39116505 Msa0546790:CDS
AGCTTACAAAAGAACAAATC+TGG 0.398649 4_1:-39111091 Msa0546790:CDS
TGTGGAGGATAGATAGGAAA+TGG 0.402084 4_1:+39118141 None:intergenic
TGAAGTACTATGTGAACTAA+TGG 0.403893 4_1:+39117062 None:intergenic
TTGTTTCTCCAGCAAATTGT+TGG 0.404979 4_1:+39108873 None:intergenic
TATGCTGGCCAACAATTTGC+TGG 0.405505 4_1:-39108881 Msa0546790:three_prime_UTR
TAAACGCTCGAGTCCGTGTA+TGG 0.405578 4_1:-39109451 Msa0546790:CDS
GTTGTTGGTTGTTCTAGCTC+TGG 0.406209 4_1:-39116577 Msa0546790:CDS
GCTCTCCAAATTGATGTCTA+AGG 0.413976 4_1:+39109063 None:intergenic
TGGATCCGTATCGCTGACTT+TGG 0.419631 4_1:-39109147 Msa0546790:CDS
TCCAAAGGGTTTCTGTGTAA+AGG 0.420893 4_1:+39117198 None:intergenic
AAAGAGAATAGTGGTGGTGA+TGG 0.422004 4_1:-39116472 Msa0546790:CDS
GCAAATTTGTGGACAAATAG+AGG 0.424244 4_1:-39116952 Msa0546790:CDS
CATCATGGCATTTGGGGAGG+TGG 0.426888 4_1:-39117018 Msa0546790:CDS
AGGCAAGAAAGAGTTGGAAT+TGG 0.426992 4_1:+39117110 None:intergenic
ATTGTTGCATAGCCAGTAAA+TGG 0.437686 4_1:+39116715 None:intergenic
CAGTGGCAATTCTTAAAGCT+TGG 0.440006 4_1:-39110988 Msa0546790:CDS
CACATGTTAGCTACTCAAAC+AGG 0.444126 4_1:-39110162 Msa0546790:CDS
ACCTGCAGGCTTCAATAACT+TGG 0.448462 4_1:-39117328 Msa0546790:CDS
AGGCAATAACAATGTTGAAA+AGG 0.450410 4_1:-39109288 Msa0546790:CDS
CAAAAGAACAAATCTGGAGC+TGG 0.451287 4_1:-39111085 Msa0546790:CDS
TTAAGGAATGTTGGTCCACT+TGG 0.451509 4_1:-39116739 Msa0546790:CDS
CGGTTGGTACCTCAACTTTG+AGG 0.455515 4_1:+39108819 None:intergenic
GGATAGATAGGAAATGGAAG+TGG 0.461464 4_1:+39118147 None:intergenic
TTACTGCTACTTGTGGTTGT+TGG 0.462089 4_1:+39111175 None:intergenic
ATCATCAAGCATGTTGTTGT+TGG 0.462163 4_1:+39117284 None:intergenic
TCTTTCAGGTAACCCTCTCT+GGG 0.462284 4_1:+39111012 None:intergenic
TCATCGTTTGAGTCAGTAGC+TGG 0.464188 4_1:-39111331 Msa0546790:CDS
GTTTCTGTGTAAAGGATTTG+AGG 0.473684 4_1:+39117206 None:intergenic
CTAATTAACCCACAAAATCA+TGG 0.474328 4_1:+39109033 None:intergenic
CTCCAAACATGCTGTTGTTG+AGG 0.475472 4_1:+39111037 None:intergenic
CTCAAAGTTGAGGTACCAAC+CGG 0.478044 4_1:-39108818 Msa0546790:three_prime_UTR
CAACCATTGGTTTCCATACA+CGG 0.478260 4_1:+39109438 None:intergenic
GCTAAATACAACGTGTTTCG+AGG 0.481842 4_1:-39108603 Msa0546790:three_prime_UTR
ATGTGTATTTCTTCAACCAT+TGG 0.483354 4_1:+39109425 None:intergenic
GAGAATAGTGGTGGTGATGG+AGG 0.486943 4_1:-39116469 Msa0546790:CDS
CTAAAGATTTGGTGATGGAA+TGG 0.487377 4_1:-39108989 Msa0546790:three_prime_UTR
GGATCCGTATCGCTGACTTT+GGG 0.487993 4_1:-39109146 Msa0546790:CDS
TAATAACAATGTTCCAAGAT+GGG 0.489579 4_1:-39116611 Msa0546790:CDS
ATACACATGCTTGAATCAAA+AGG 0.494309 4_1:-39109410 Msa0546790:CDS
TTTCTGTGTAAAGGATTTGA+GGG 0.495400 4_1:+39117207 None:intergenic
ATTGTTATTATTATTATCAA+AGG 0.498306 4_1:+39116624 None:intergenic
GATGGAATGGAAGGAATAAT+CGG 0.499895 4_1:-39108976 Msa0546790:three_prime_UTR
AAGGCCTTAAGTATAGTAGT+TGG 0.501764 4_1:-39117479 Msa0546790:five_prime_UTR
GGTTGGTACCTCAACTTTGA+GGG 0.503041 4_1:+39108820 None:intergenic
GATAGATAGGAAATGGAAGT+GGG 0.504038 4_1:+39118148 None:intergenic
AACTTCTTAGATTACCTTGG+TGG 0.504719 4_1:+39118100 None:intergenic
GAAAGTGCAGTTTCTGCAAA+AGG 0.505107 4_1:-39116544 Msa0546790:CDS
AAATATGGATTCAACAGTGA+TGG 0.505789 4_1:-39109189 Msa0546790:CDS
ACATCTCTAGAAACCCATCT+TGG 0.508336 4_1:+39116598 None:intergenic
TCAAAAGAGAAAGAGAATAG+TGG 0.510959 4_1:-39116481 Msa0546790:CDS
GTAGTTGGAAATTTGGAATG+AGG 0.511929 4_1:-39117464 Msa0546790:exon
ACCAACAACACTAATTTCTA+GGG 0.513111 4_1:-39116785 Msa0546790:CDS
GTTCATGACAATATTCCAAA+GGG 0.513243 4_1:+39117184 None:intergenic
GCTACTTACTACTCGCAAAC+CGG 0.516743 4_1:+39108799 None:intergenic
GTGGTGGTGATGGAGGAATT+GGG 0.517374 4_1:-39116462 Msa0546790:CDS
ATCATGGCATTTGGGGAGGT+GGG 0.517411 4_1:-39117017 Msa0546790:CDS
AAGATAGATTCTTGTTTGTG+TGG 0.518155 4_1:+39118123 None:intergenic
ATGTGTTTATCAGTGTCTGT+AGG 0.521595 4_1:+39110180 None:intergenic
TCCAAGTTATTGAAGCCTGC+AGG 0.521736 4_1:+39117327 None:intergenic
TGTGCAACATGCAATTGATC+TGG 0.523813 4_1:+39117441 None:intergenic
ATACCATCAACAAATGCAAA+TGG 0.525199 4_1:-39111359 Msa0546790:CDS
AAATTCGAAGATGAAGTTGA+GGG 0.527318 4_1:+39116835 None:intergenic
ATAATAACAATGTTCCAAGA+TGG 0.528878 4_1:-39116612 Msa0546790:CDS
AGTTTCAGTGTTTGGAAATG+GGG 0.530029 4_1:-39109319 Msa0546790:CDS
ATCAGTAGGCAAGAAAGAGT+TGG 0.531884 4_1:+39117104 None:intergenic
TGGGTTTCTAGAGATGTTGT+TGG 0.531983 4_1:-39116592 Msa0546790:CDS
AGTAGTGGTTTAAGGAATGT+TGG 0.534594 4_1:-39116748 Msa0546790:CDS
TGTGTTTATCAGTGTCTGTA+GGG 0.537038 4_1:+39110181 None:intergenic
GCAGCAACATCAGTTGCAGC+AGG 0.539152 4_1:-39109093 Msa0546790:CDS
GCTTCTTTAATGAATCATCA+TGG 0.540035 4_1:-39117033 Msa0546790:CDS
TATAACACAGGTTAATTGGA+AGG 0.543045 4_1:-39117787 Msa0546790:five_prime_UTR
ATGAATTGAGTCGTGGAGGT+TGG 0.544377 4_1:-39108915 Msa0546790:three_prime_UTR
AAAATTCGAAGATGAAGTTG+AGG 0.545913 4_1:+39116834 None:intergenic
TAGCTGAATCAAGTAACAGT+AGG 0.546492 4_1:-39117161 Msa0546790:CDS
CAATTTGCTGGAGAAACAAA+GGG 0.548315 4_1:-39108869 Msa0546790:three_prime_UTR
TTATTGAAGCCTGCAGGTTG+TGG 0.549648 4_1:+39117333 None:intergenic
GATACGGATCCACGTTGATA+CGG 0.551902 4_1:+39109158 None:intergenic
TTTACTGATTACAATCCTCA+AGG 0.552560 4_1:-39116895 Msa0546790:CDS
AATATGGATTCAACAGTGAT+GGG 0.554086 4_1:-39109188 Msa0546790:CDS
AGATTTGGTGATGGAATGGA+AGG 0.554279 4_1:-39108985 Msa0546790:three_prime_UTR
CACCAAACACCACAACCTGC+AGG 0.555881 4_1:-39117342 Msa0546790:CDS
CTCAACAACAGCATGTTTGG+AGG 0.557669 4_1:-39111036 Msa0546790:CDS
GTTGGTTGTTCTAGCTCTGG+TGG 0.558286 4_1:-39116574 Msa0546790:CDS
TACCATAAAGTCGGTTGTAG+AGG 0.559908 4_1:-39117736 Msa0546790:five_prime_UTR
CTAAATACAACGTGTTTCGA+GGG 0.561009 4_1:-39108602 Msa0546790:three_prime_UTR
AAAAGAACAAATCTGGAGCT+GGG 0.563662 4_1:-39111084 Msa0546790:CDS
TTGGCCAGAGTGAAATATGC+TGG 0.565493 4_1:-39108896 Msa0546790:three_prime_UTR
GACTGTACTACTAGTAGTAG+TGG 0.567360 4_1:-39116763 Msa0546790:CDS
ACAATTTGCTGGAGAAACAA+AGG 0.568223 4_1:-39108870 Msa0546790:three_prime_UTR
TTTGATTACCGGAGAATCAA+AGG 0.569161 4_1:-39117680 Msa0546790:intron
TTTAGAGCCAATGAAATGTA+TGG 0.569263 4_1:+39111292 None:intergenic
ATAGATTCTTGTTTGTGTGG+AGG 0.572433 4_1:+39118126 None:intergenic
TGTAATTACACAAACGTGGA+TGG 0.573190 4_1:+39108550 None:intergenic
AGCTGAATCAAGTAACAGTA+GGG 0.574347 4_1:-39117160 Msa0546790:CDS
TTGGCCAGCATATTTCACTC+TGG 0.580288 4_1:+39108892 None:intergenic
AACCTGTGTTATATATATGT+CGG 0.583230 4_1:+39117797 None:intergenic
TTATTACAAACGAAGAGCAA+TGG 0.584359 4_1:-39109265 Msa0546790:CDS
AGTTTAGATGAATTGAGTCG+TGG 0.585775 4_1:-39108922 Msa0546790:three_prime_UTR
ATGTTTGGAGGCCCCAGAGA+GGG 0.586157 4_1:-39111024 Msa0546790:CDS
AGATAGGAAATGGAAGTGGG+AGG 0.589107 4_1:+39118151 None:intergenic
AGTTCATGACAATATTCCAA+AGG 0.591381 4_1:+39117183 None:intergenic
AAATTTATTACTGCTACTTG+TGG 0.591603 4_1:+39111168 None:intergenic
GAAGACTTGAAAATATCAGT+AGG 0.592588 4_1:+39117090 None:intergenic
GTTGGTACCTCAACTTTGAG+GGG 0.594402 4_1:+39108821 None:intergenic
AAATTAGGAGAGACAAATTG+AGG 0.599560 4_1:-39117416 Msa0546790:CDS
TTAATAATATTCAAGAGAAG+AGG 0.603624 4_1:-39109241 Msa0546790:CDS
GAGACCCAAAGTCAGCGATA+CGG 0.605617 4_1:+39109142 None:intergenic
GGCAAAGCCCCTCAAAGTTG+AGG 0.606984 4_1:-39108828 Msa0546790:three_prime_UTR
ATGAATCATCATGGCATTTG+GGG 0.611041 4_1:-39117024 Msa0546790:CDS
TTGATATATAGGTTACAAGA+AGG 0.611148 4_1:-39111390 Msa0546790:intron
TCTTCTAACAACTCTTGACA+AGG 0.615926 4_1:+39116667 None:intergenic
CTTGATGATCATGATCATGA+AGG 0.617196 4_1:-39117270 Msa0546790:CDS
AAAGAGAAAGAGAATAGTGG+TGG 0.617298 4_1:-39116478 Msa0546790:CDS
ATTACACAAACGTGGATGGA+GGG 0.618066 4_1:+39108554 None:intergenic
CTTACTACTCGCAAACCGGT+TGG 0.623907 4_1:+39108803 None:intergenic
AATTACACAAACGTGGATGG+AGG 0.628647 4_1:+39108553 None:intergenic
GCAACATCAGTTGCAGCAGG+AGG 0.630480 4_1:-39109090 Msa0546790:CDS
TTAGATGAATTGAGTCGTGG+AGG 0.632065 4_1:-39108919 Msa0546790:three_prime_UTR
AGTCCGTGTATGGAAACCAA+TGG 0.633260 4_1:-39109441 Msa0546790:CDS
TAAACTTTAAGTCTAGCGAA+AGG 0.635034 4_1:+39108939 None:intergenic
AACAGGTCTATCAAGAAACC+AGG 0.637050 4_1:-39110145 Msa0546790:intron
CCATCAACAAATGCAAATGG+TGG 0.649972 4_1:-39111356 Msa0546790:CDS
TAGCCAGTAAATGGTCCAAG+TGG 0.657116 4_1:+39116724 None:intergenic
TAGTTGTAATTACACAAACG+TGG 0.664338 4_1:+39108546 None:intergenic
CTGACTTTGGGTCTCAGACA+CGG 0.667702 4_1:-39109134 Msa0546790:CDS
AATCATCATGGCATTTGGGG+AGG 0.668916 4_1:-39117021 Msa0546790:CDS
TACCGACATATATATAACAC+AGG 0.669110 4_1:-39117799 Msa0546790:five_prime_UTR
AAGTGGGAGGAAGCAAAGCA+AGG 0.670551 4_1:+39118164 None:intergenic
GCTAGACGATACCATAAAGT+CGG 0.673209 4_1:-39117745 Msa0546790:five_prime_UTR
ATTACTGTACATGCACGATG+AGG 0.677646 4_1:-39116380 Msa0546790:intron
AGGGTTACCTGAAAGATCAG+TGG 0.678566 4_1:-39111005 Msa0546790:CDS
AGTGACAAGGATAAACCTTG+AGG 0.680284 4_1:+39116880 None:intergenic
AAAGGTAGTAGTAATTCAGG+TGG 0.682385 4_1:-39116526 Msa0546790:CDS
CAAGAATCTATCTTCCACCA+AGG 0.683473 4_1:-39118114 Msa0546790:intron
TACATGTCAAGTATTAGGAG+AGG 0.684996 4_1:-39111212 Msa0546790:CDS
CATGTTTGGAGGCCCCAGAG+AGG 0.701806 4_1:-39111025 Msa0546790:CDS
TGAATTTGATGAAAGTGACA+AGG 0.713273 4_1:+39116867 None:intergenic
CTTTCAGGTAACCCTCTCTG+GGG 0.726576 4_1:+39111013 None:intergenic
TGGAAGGAATAATCGGAACG+AGG 0.742633 4_1:-39108969 Msa0546790:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATAATAATAATATTA+TGG + chr4_1:39109152-39109171 None:intergenic 0.0%
!! AAAAATAAAAATTTGATAGA+AGG + chr4_1:39108751-39108770 None:intergenic 10.0%
!!! ATTGTTATTATTATTATCAA+AGG + chr4_1:39110089-39110108 None:intergenic 10.0%
!! AAAATCATACATAAAATAAA+GGG + chr4_1:39110586-39110605 None:intergenic 10.0%
!! TAAAATCATACATAAAATAA+AGG + chr4_1:39110587-39110606 None:intergenic 10.0%
!!! TACTGTTTTAATTTAAAAAA+AGG - chr4_1:39110681-39110700 Msa0546790:intron 10.0%
!! ATAAAAAATTATATATTGGT+AGG + chr4_1:39111008-39111027 None:intergenic 10.0%
!!! ACCAATATATAATTTTTTAT+TGG - chr4_1:39111008-39111027 Msa0546790:CDS 10.0%
!! TCCAATAAAAAATTATATAT+TGG + chr4_1:39111012-39111031 None:intergenic 10.0%
!!! TCAGATTTTTATTTATTTTT+AGG - chr4_1:39111090-39111109 Msa0546790:CDS 10.0%
!!! TTTTATTTATTTTTAGGTTT+TGG - chr4_1:39111096-39111115 Msa0546790:CDS 10.0%
!!! TTTATTTATTTTTAGGTTTT+GGG - chr4_1:39111097-39111116 Msa0546790:CDS 10.0%
!!! AGTTTAAATTTCAATTTTTT+AGG + chr4_1:39112138-39112157 None:intergenic 10.0%
!! TTACTTTAATATAATAATTG+TGG - chr4_1:39114484-39114503 Msa0546790:intron 10.0%
!!! AATTAGTTTAATATTGTTTA+AGG - chr4_1:39115002-39115021 Msa0546790:intron 10.0%
!! ATAATAATAATAATATGACA+AGG - chr4_1:39115572-39115591 Msa0546790:intron 10.0%
!! TTAAATTATATAAGTATGTA+CGG - chr4_1:39115805-39115824 Msa0546790:intron 10.0%
!!! AAAAAACATTTTTTAAAATG+GGG + chr4_1:39115895-39115914 None:intergenic 10.0%
!!! CAAAAAACATTTTTTAAAAT+GGG + chr4_1:39115896-39115915 None:intergenic 10.0%
!!! TAAAAAATTTTGTAATTTGT+AGG + chr4_1:39116058-39116077 None:intergenic 10.0%
!!! TGTTTTATGAATATAATAAA+AGG - chr4_1:39116460-39116479 Msa0546790:CDS 10.0%
!! ATTTAAATTTAATGTGATAT+TGG - chr4_1:39118196-39118215 Msa0546790:five_prime_UTR 10.0%
!! TTTAAATTTAATGTGATATT+GGG - chr4_1:39118197-39118216 Msa0546790:five_prime_UTR 10.0%
!! TAAAGAATATTTCTTCTTAT+GGG + chr4_1:39110445-39110464 None:intergenic 15.0%
!! TTAAAGAATATTTCTTCTTA+TGG + chr4_1:39110446-39110465 None:intergenic 15.0%
!! CAATAATAGAAATAGTTTAT+TGG + chr4_1:39110524-39110543 None:intergenic 15.0%
!!! TTATTTATTTTTAGGTTTTG+GGG - chr4_1:39111098-39111117 Msa0546790:CDS 15.0%
!! ATAAAAAAACATATTCGATA+TGG + chr4_1:39111266-39111285 None:intergenic 15.0%
!! AAAATAAGGACAAAATAAAT+TGG - chr4_1:39111484-39111503 Msa0546790:intron 15.0%
!!! TCTAACATTTACTATTTTAT+TGG - chr4_1:39111686-39111705 Msa0546790:intron 15.0%
!!! CTAACATTTACTATTTTATT+GGG - chr4_1:39111687-39111706 Msa0546790:intron 15.0%
!! AATGATATTCTATACTAATT+TGG + chr4_1:39111987-39112006 None:intergenic 15.0%
!!! ATGACAGTTTATTTTTTTAT+CGG - chr4_1:39112242-39112261 Msa0546790:intron 15.0%
!! GAATAAAGATAAAACAAATT+AGG + chr4_1:39112648-39112667 None:intergenic 15.0%
!!! TTAACTAAGATTTTGTAATA+CGG - chr4_1:39113437-39113456 Msa0546790:intron 15.0%
!! TTATTTATAAATCATGCTAA+TGG - chr4_1:39113652-39113671 Msa0546790:intron 15.0%
!!! AAAACTCTAAAAAAGTTTTT+AGG - chr4_1:39113910-39113929 Msa0546790:intron 15.0%
!!! AAACTCTAAAAAAGTTTTTA+GGG - chr4_1:39113911-39113930 Msa0546790:intron 15.0%
!! TAGAATATACTATATATAGT+TGG - chr4_1:39115270-39115289 Msa0546790:intron 15.0%
!! ATAATGTTGAATTGATATAT+AGG - chr4_1:39115309-39115328 Msa0546790:intron 15.0%
!!! ACATTGTTTTTTTGAAAATA+TGG + chr4_1:39115866-39115885 None:intergenic 15.0%
!!! CCAAAAAACATTTTTTAAAA+TGG + chr4_1:39115897-39115916 None:intergenic 15.0%
!!! CCATTTTAAAAAATGTTTTT+TGG - chr4_1:39115894-39115913 Msa0546790:intron 15.0%
!! AAATTGTAGAAATTATTGTA+AGG - chr4_1:39116097-39116116 Msa0546790:intron 15.0%
!!! TTTCAATGCATAATTTTTTA+GGG + chr4_1:39116417-39116436 None:intergenic 15.0%
!!! ATTTCAATGCATAATTTTTT+AGG + chr4_1:39116418-39116437 None:intergenic 15.0%
!!! AACATAAGATATATTGTTTT+AGG + chr4_1:39116444-39116463 None:intergenic 15.0%
!!! TTTTATATTATTTCTCTTGA+TGG - chr4_1:39116607-39116626 Msa0546790:CDS 15.0%
!!! AATTATTGATTTGAAAATCA+AGG + chr4_1:39116675-39116694 None:intergenic 15.0%
!! TGTAATAACTGATAAATAAT+AGG - chr4_1:39117221-39117240 Msa0546790:CDS 15.0%
!! ATAAATAATAGGTATCAAAT+TGG - chr4_1:39117232-39117251 Msa0546790:CDS 15.0%
!! TATATATAACACAGGTTAAT+TGG - chr4_1:39108919-39108938 Msa0546790:three_prime_UTR 20.0%
!!! TTTTTTTTTTCAGCTTTGAA+AGG - chr4_1:39109212-39109231 Msa0546790:CDS 20.0%
!! TAAAATAAAACAGACTACAA+GGG + chr4_1:39110381-39110400 None:intergenic 20.0%
!!! TTTTTTAATATTTGCCCTAA+AGG + chr4_1:39110422-39110441 None:intergenic 20.0%
!!! GAATTTTTTTTGTCTGATAT+TGG - chr4_1:39110950-39110969 Msa0546790:intron 20.0%
!!! TATTTATTTTTAGGTTTTGG+GGG - chr4_1:39111099-39111118 Msa0546790:CDS 20.0%
!!! TTCATTTTCTTTTGAAATCT+TGG - chr4_1:39111214-39111233 Msa0546790:CDS 20.0%
!!! TCATTTTCTTTTGAAATCTT+GGG - chr4_1:39111215-39111234 Msa0546790:CDS 20.0%
!!! CTAAAAGTTATGATTTTACA+GGG + chr4_1:39111348-39111367 None:intergenic 20.0%
!!! TCTAAAAGTTATGATTTTAC+AGG + chr4_1:39111349-39111368 None:intergenic 20.0%
!!! TTTTCTACACTTTTTGAAAA+TGG + chr4_1:39111408-39111427 None:intergenic 20.0%
!! AGATCTATCAAATCAAAATA+AGG - chr4_1:39111470-39111489 Msa0546790:intron 20.0%
!! AAATTGGAAGCAATTTATAT+AGG - chr4_1:39111500-39111519 Msa0546790:intron 20.0%
!! AATTGGAAGCAATTTATATA+GGG - chr4_1:39111501-39111520 Msa0546790:intron 20.0%
!! TTCGTGAAAACAAAAAAAAA+AGG - chr4_1:39111582-39111601 Msa0546790:intron 20.0%
!! AAAACACTAGATAATGTAAA+TGG + chr4_1:39111943-39111962 None:intergenic 20.0%
!!! ATTTACATTATCTAGTGTTT+TGG - chr4_1:39111942-39111961 Msa0546790:intron 20.0%
!!! TTTACATTATCTAGTGTTTT+GGG - chr4_1:39111943-39111962 Msa0546790:intron 20.0%
!! TTTGTCAAACAGTAATTTAT+AGG - chr4_1:39112064-39112083 Msa0546790:intron 20.0%
!! GAAAATTGAGAAATCAAATT+GGG + chr4_1:39112096-39112115 None:intergenic 20.0%
!! AGAAAATTGAGAAATCAAAT+TGG + chr4_1:39112097-39112116 None:intergenic 20.0%
!!! ATTTTTTAGGAGACTAATTT+GGG + chr4_1:39112125-39112144 None:intergenic 20.0%
!!! AATTTTTTAGGAGACTAATT+TGG + chr4_1:39112126-39112145 None:intergenic 20.0%
!! TTCTAATATTATGATGAATG+AGG - chr4_1:39112196-39112215 Msa0546790:intron 20.0%
!! ATGAGGATTAATTTATCTTA+TGG - chr4_1:39112213-39112232 Msa0546790:intron 20.0%
!!! TGACAGTTTATTTTTTTATC+GGG - chr4_1:39112243-39112262 Msa0546790:intron 20.0%
!!! ATAAATAGCATTTTCCATAT+TGG + chr4_1:39112367-39112386 None:intergenic 20.0%
!! TTTAAAAGGATTGATTGAAA+TGG - chr4_1:39112607-39112626 Msa0546790:intron 20.0%
!!! ACAAATTTTCTCAAATCATA+TGG - chr4_1:39112769-39112788 Msa0546790:intron 20.0%
!! AACAAAACACTTAGAAAAAT+GGG + chr4_1:39112893-39112912 None:intergenic 20.0%
!! AAACAAAACACTTAGAAAAA+TGG + chr4_1:39112894-39112913 None:intergenic 20.0%
!!! TTTTCTAAGTGTTTTGTTTA+TGG - chr4_1:39112895-39112914 Msa0546790:intron 20.0%
!! AATTATGTATGTTATTCACA+TGG - chr4_1:39113035-39113054 Msa0546790:intron 20.0%
!! ATTATGTATGTTATTCACAT+GGG - chr4_1:39113036-39113055 Msa0546790:intron 20.0%
!! GATACAAATTAATCCATATA+TGG - chr4_1:39113060-39113079 Msa0546790:intron 20.0%
!!! CTATTTTCTCAAATTATTAC+TGG - chr4_1:39113184-39113203 Msa0546790:intron 20.0%
!! AGTACAAAACAAAACTAATT+TGG + chr4_1:39113393-39113412 None:intergenic 20.0%
!! TAGCATGATTTATAAATAAC+TGG + chr4_1:39113651-39113670 None:intergenic 20.0%
!! TATTACATAACTTTCCTTAT+TGG - chr4_1:39114647-39114666 Msa0546790:intron 20.0%
!! TCGTTAAAATTTAGTTGTAT+CGG - chr4_1:39115025-39115044 Msa0546790:intron 20.0%
!! ACTATATATAGTTGGAAAAA+TGG - chr4_1:39115278-39115297 Msa0546790:intron 20.0%
!!! TCTTCTGACTTTTTTAAAAT+AGG - chr4_1:39115939-39115958 Msa0546790:intron 20.0%
!!! CTTCTGACTTTTTTAAAATA+GGG - chr4_1:39115940-39115959 Msa0546790:intron 20.0%
!!! TTCTGACTTTTTTAAAATAG+GGG - chr4_1:39115941-39115960 Msa0546790:intron 20.0%
!!! TAATACTTTTTCATACAACA+TGG + chr4_1:39116351-39116370 None:intergenic 20.0%
!!! TGTATGAAAAAGTATTATGA+AGG - chr4_1:39116354-39116373 Msa0546790:intron 20.0%
!! ACAATAAAAACAAAGTAGTA+CGG + chr4_1:39116841-39116860 None:intergenic 20.0%
!!! ATTTTCTGCAATTTGAATTA+TGG - chr4_1:39116918-39116937 Msa0546790:CDS 20.0%
!!! TATTATGTATCATTTTGTTG+AGG - chr4_1:39117144-39117163 Msa0546790:CDS 20.0%
!! TCAAAACAATGATAAAAATG+AGG - chr4_1:39117341-39117360 Msa0546790:CDS 20.0%
!! TTAATAATATTCAAGAGAAG+AGG - chr4_1:39117469-39117488 Msa0546790:exon 20.0%
!!! TATCATGTTTTCTAAAGATT+TGG - chr4_1:39117710-39117729 Msa0546790:five_prime_UTR 20.0%
!! TTGTTAAGCTTTAGCATATA+CGG + chr4_1:39108848-39108867 None:intergenic 25.0%
! AACCTGTGTTATATATATGT+CGG + chr4_1:39108916-39108935 None:intergenic 25.0%
! GAAGGAAATTACACTAATTT+CGG - chr4_1:39108941-39108960 Msa0546790:three_prime_UTR 25.0%
!!! TTTTCTTTGGTTTTGATTAC+CGG - chr4_1:39109019-39109038 Msa0546790:exon 25.0%
! ATTTCCAACTACTATACTTA+AGG + chr4_1:39109238-39109257 None:intergenic 25.0%
! AAGTATAGTAGTTGGAAATT+TGG - chr4_1:39109239-39109258 Msa0546790:CDS 25.0%
!! AATTGTTCAATGTTGTTGTT+AGG + chr4_1:39109338-39109357 None:intergenic 25.0%
! TCATGAAATACAGGTATAAT+AGG + chr4_1:39109731-39109750 None:intergenic 25.0%
! ATGAAAATCAAGCAAATTTG+TGG - chr4_1:39109747-39109766 Msa0546790:intron 25.0%
!!! CAACAATTTTGAAGAATTCA+AGG - chr4_1:39110011-39110030 Msa0546790:intron 25.0%
! ATAATAACAATGTTCCAAGA+TGG - chr4_1:39110098-39110117 Msa0546790:intron 25.0%
! TAATAACAATGTTCCAAGAT+GGG - chr4_1:39110099-39110118 Msa0546790:intron 25.0%
! CTAAAATAAAACAGACTACA+AGG + chr4_1:39110382-39110401 None:intergenic 25.0%
! TAACTTAATTAATGTCTGTC+AGG - chr4_1:39110644-39110663 Msa0546790:intron 25.0%
! AAAAAAAAGAAGAAGAAGCT+AGG - chr4_1:39110804-39110823 Msa0546790:intron 25.0%
! GACAAAATTGTATTATCATG+TGG - chr4_1:39110851-39110870 Msa0546790:intron 25.0%
!!! TGGTATATTTTTTCAAGACA+TGG - chr4_1:39110871-39110890 Msa0546790:intron 25.0%
! TGATATTGGATTTCTATTCT+TGG - chr4_1:39110964-39110983 Msa0546790:intron 25.0%
! CTTACTATTATTGCAAATCT+AGG - chr4_1:39111053-39111072 Msa0546790:CDS 25.0%
! AATAACATAATAGGACAGAA+TGG + chr4_1:39111144-39111163 None:intergenic 25.0%
! CAATGCAAGAATAACATAAT+AGG + chr4_1:39111153-39111172 None:intergenic 25.0%
! TTGGCAAAAAATTTCAACAA+AGG - chr4_1:39111622-39111641 Msa0546790:intron 25.0%
! ATGTGATGAAATATAAGCAA+AGG + chr4_1:39111873-39111892 None:intergenic 25.0%
! TTGCTTATATTTCATCACAT+AGG - chr4_1:39111873-39111892 Msa0546790:intron 25.0%
! TGCTTATATTTCATCACATA+GGG - chr4_1:39111874-39111893 Msa0546790:intron 25.0%
!!! TAAATGGATTAGAGTAACAA+TGG + chr4_1:39111927-39111946 None:intergenic 25.0%
!!! GACAGTTTATTTTTTTATCG+GGG - chr4_1:39112244-39112263 Msa0546790:intron 25.0%
!! GGGGCTAAAATAAATTATTT+TGG + chr4_1:39112301-39112320 None:intergenic 25.0%
!!! TTTATTTTAGCCCCTTAATT+TGG - chr4_1:39112307-39112326 Msa0546790:intron 25.0%
! AACAATGATTCCAAATTAAG+GGG + chr4_1:39112320-39112339 None:intergenic 25.0%
! CAACAATGATTCCAAATTAA+GGG + chr4_1:39112321-39112340 None:intergenic 25.0%
!!! AGAATTTTTCAAGACACATA+TGG - chr4_1:39112404-39112423 Msa0546790:intron 25.0%
!! TTTATTCTATTTTCTGTCTG+TGG - chr4_1:39112661-39112680 Msa0546790:intron 25.0%
!! TTATTCTATTTTCTGTCTGT+GGG - chr4_1:39112662-39112681 Msa0546790:intron 25.0%
! ACATAATAACATACTGTAAG+AGG - chr4_1:39112690-39112709 Msa0546790:intron 25.0%
!! CAAATCATATGGATATTTTC+TGG - chr4_1:39112780-39112799 Msa0546790:intron 25.0%
!! ATGTTGATTGTATTTAGGTT+TGG - chr4_1:39112806-39112825 Msa0546790:intron 25.0%
! CTTTGTGTTAAATATTCCAA+AGG - chr4_1:39113296-39113315 Msa0546790:intron 25.0%
! TTAAGAATAGAGTTTGAACT+TGG + chr4_1:39113330-39113349 None:intergenic 25.0%
!!! TTGTTTTGTACTTAGTTTGA+TGG - chr4_1:39113401-39113420 Msa0546790:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr4_1:39114170-39114189 Msa0546790:intron 25.0%
!! GTTTCTCTAATAGTTTTCTT+AGG + chr4_1:39114295-39114314 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr4_1:39114312-39114331 Msa0546790:intron 25.0%
!! TATAGTGATTGTTATTGATG+TGG - chr4_1:39114574-39114593 Msa0546790:intron 25.0%
! AGTTCTTTATACTACCAATA+AGG + chr4_1:39114664-39114683 None:intergenic 25.0%
! ATATTTATACATTCATCTCG+AGG + chr4_1:39114697-39114716 None:intergenic 25.0%
! ATAGAAAGAACACAAATCAT+AGG - chr4_1:39114724-39114743 Msa0546790:intron 25.0%
! TAGAAAGAACACAAATCATA+GGG - chr4_1:39114725-39114744 Msa0546790:intron 25.0%
!! ACAGAAGGTGTAAATTATTA+AGG + chr4_1:39114799-39114818 None:intergenic 25.0%
!! ATTTGAACTTTTTGAACAGA+AGG + chr4_1:39114814-39114833 None:intergenic 25.0%
! CAATAATACAACCAAGAAAT+TGG + chr4_1:39114897-39114916 None:intergenic 25.0%
!! AAATTTTCAGTATGAAGTGT+CGG + chr4_1:39114942-39114961 None:intergenic 25.0%
! CACTTTATAAAGTGATTCTA+AGG + chr4_1:39115079-39115098 None:intergenic 25.0%
! ACTTTATAAAGTGTATCATG+CGG - chr4_1:39115086-39115105 Msa0546790:intron 25.0%
! TTGATATATAGGTTACAAGA+AGG - chr4_1:39115320-39115339 Msa0546790:intron 25.0%
! AAACTTACATGTCAAGTATT+AGG - chr4_1:39115493-39115512 Msa0546790:intron 25.0%
!! AAATTTATTACTGCTACTTG+TGG + chr4_1:39115545-39115564 None:intergenic 25.0%
!! ATTTGTTCTTTTGTAAGCTA+TGG + chr4_1:39115618-39115637 None:intergenic 25.0%
!! ATGTACGGATTAAATATGTT+TGG - chr4_1:39115820-39115839 Msa0546790:intron 25.0%
! CAATTTACAAAACTACATGT+AGG + chr4_1:39116083-39116102 None:intergenic 25.0%
! ATGCAAGATTTATTTCACTT+GGG + chr4_1:39116178-39116197 None:intergenic 25.0%
! CATGGTTAAATATGGTATTA+GGG + chr4_1:39116333-39116352 None:intergenic 25.0%
! ACATGGTTAAATATGGTATT+AGG + chr4_1:39116334-39116353 None:intergenic 25.0%
! TCATACAACATGGTTAAATA+TGG + chr4_1:39116341-39116360 None:intergenic 25.0%
!!! AATGCATAATTTTTTAGGGT+GGG + chr4_1:39116413-39116432 None:intergenic 25.0%
!! TTTGAAAACTTCGAAGTTTT+GGG + chr4_1:39116735-39116754 None:intergenic 25.0%
!! ATTTGAAAACTTCGAAGTTT+TGG + chr4_1:39116736-39116755 None:intergenic 25.0%
!! TAATTGTTCCTTGATTGTTT+TGG - chr4_1:39116759-39116778 Msa0546790:CDS 25.0%
! AATGAAAACCAAAACAATCA+AGG + chr4_1:39116770-39116789 None:intergenic 25.0%
!!! GTATGTTAATTTTTTACTGC+TGG - chr4_1:39117190-39117209 Msa0546790:CDS 25.0%
! AAGATAGATTCTTGTTTGTG+TGG + chr4_1:39108590-39108609 None:intergenic 30.0%
AGAAACTTCTTAGATTACCT+TGG + chr4_1:39108616-39108635 None:intergenic 30.0%
CTCTCTTATAACAACTCAAA+TGG + chr4_1:39108797-39108816 None:intergenic 30.0%
AGTTGTTATAAGAGAGATCA+AGG - chr4_1:39108801-39108820 Msa0546790:three_prime_UTR 30.0%
GTTGTTATAAGAGAGATCAA+GGG - chr4_1:39108802-39108821 Msa0546790:three_prime_UTR 30.0%
!!! TTGTTTTTGTCTTCTTCTTC+AGG - chr4_1:39108869-39108888 Msa0546790:three_prime_UTR 30.0%
TACCGACATATATATAACAC+AGG - chr4_1:39108911-39108930 Msa0546790:three_prime_UTR 30.0%
TATAACACAGGTTAATTGGA+AGG - chr4_1:39108923-39108942 Msa0546790:three_prime_UTR 30.0%
AAATTAGGAGAGACAAATTG+AGG - chr4_1:39109294-39109313 Msa0546790:CDS 30.0%
TTTCTGTGTAAAGGATTTGA+GGG + chr4_1:39109506-39109525 None:intergenic 30.0%
GTTCATGACAATATTCCAAA+GGG + chr4_1:39109529-39109548 None:intergenic 30.0%
AGTTCATGACAATATTCCAA+AGG + chr4_1:39109530-39109549 None:intergenic 30.0%
GAAGACTTGAAAATATCAGT+AGG + chr4_1:39109623-39109642 None:intergenic 30.0%
! TGAAGTACTATGTGAACTAA+TGG + chr4_1:39109651-39109670 None:intergenic 30.0%
TTCACATAGTACTTCAGAAA+TGG - chr4_1:39109655-39109674 Msa0546790:intron 30.0%
GCTTCTTTAATGAATCATCA+TGG - chr4_1:39109677-39109696 Msa0546790:intron 30.0%
TAATGAATCATCATGGCATT+TGG - chr4_1:39109684-39109703 Msa0546790:intron 30.0%
AATGAATCATCATGGCATTT+GGG - chr4_1:39109685-39109704 Msa0546790:intron 30.0%
! GCTTGATTTTCATGAAATAC+AGG + chr4_1:39109740-39109759 None:intergenic 30.0%
! TTTACTGATTACAATCCTCA+AGG - chr4_1:39109815-39109834 Msa0546790:intron 30.0%
TGAATTTGATGAAAGTGACA+AGG + chr4_1:39109846-39109865 None:intergenic 30.0%
AAATTCGAAGATGAAGTTGA+GGG + chr4_1:39109878-39109897 None:intergenic 30.0%
AAAATTCGAAGATGAAGTTG+AGG + chr4_1:39109879-39109898 None:intergenic 30.0%
AACCAACAACACTAATTTCT+AGG - chr4_1:39109924-39109943 Msa0546790:intron 30.0%
ACCAACAACACTAATTTCTA+GGG - chr4_1:39109925-39109944 Msa0546790:intron 30.0%
TCAAAAGAGAAAGAGAATAG+TGG - chr4_1:39110229-39110248 Msa0546790:intron 30.0%
!!! GTAATTGAGCCTTATTCTTT+TGG + chr4_1:39110315-39110334 None:intergenic 30.0%
!!! GTCTTTTACTGTTGATTCAA+AGG - chr4_1:39110734-39110753 Msa0546790:intron 30.0%
ATGGTTAAGTTTGTAGCTTA+TGG - chr4_1:39110890-39110909 Msa0546790:intron 30.0%
AGCTTATGGATTTCTTAGAT+TGG - chr4_1:39110904-39110923 Msa0546790:intron 30.0%
! ATATAGTTCTTTTATCCCCT+AGG + chr4_1:39111450-39111469 None:intergenic 30.0%
!!! GGTGTGAAATAAGAGTATTT+TGG - chr4_1:39111603-39111622 Msa0546790:intron 30.0%
GCTTATATTTCATCACATAG+GGG - chr4_1:39111875-39111894 Msa0546790:intron 30.0%
!!! TTTTTTATCGGGGACTAAAT+CGG - chr4_1:39112254-39112273 Msa0546790:intron 30.0%
CCAACAATGATTCCAAATTA+AGG + chr4_1:39112322-39112341 None:intergenic 30.0%
! CCTTAATTTGGAATCATTGT+TGG - chr4_1:39112319-39112338 Msa0546790:intron 30.0%
TATATTGTGAGAGACCAATA+TGG - chr4_1:39112350-39112369 Msa0546790:intron 30.0%
! TATTCTATTTTCTGTCTGTG+GGG - chr4_1:39112663-39112682 Msa0546790:intron 30.0%
!! TTAGCTTTGATTTGACATTG+TGG - chr4_1:39112722-39112741 Msa0546790:intron 30.0%
! TGTTGGTTATTTGGTATTTG+AGG - chr4_1:39112745-39112764 Msa0546790:intron 30.0%
! GGTGAATGTTGATTGTATTT+AGG - chr4_1:39112801-39112820 Msa0546790:intron 30.0%
! ATTGTATTTAGGTTTGGTCT+TGG - chr4_1:39112812-39112831 Msa0546790:intron 30.0%
!!! TAAGTGTTTTGTTTATGGCT+TGG - chr4_1:39112900-39112919 Msa0546790:intron 30.0%
!! ACAACATCATTCTGAAATGT+TGG + chr4_1:39113113-39113132 None:intergenic 30.0%
AACAAAACTAATTTGGTACG+AGG + chr4_1:39113386-39113405 None:intergenic 30.0%
!! TGCAGAAATCTCTAAAACAA+TGG - chr4_1:39113503-39113522 Msa0546790:intron 30.0%
AAGTTAAGCAAACAGTGATT+TGG - chr4_1:39113618-39113637 Msa0546790:intron 30.0%
!! CCAAAAAAGCATTCTTGTTT+GGG + chr4_1:39113685-39113704 None:intergenic 30.0%
!! TCCAAAAAAGCATTCTTGTT+TGG + chr4_1:39113686-39113705 None:intergenic 30.0%
AATGAATAGACACAGTTGAA+GGG + chr4_1:39113871-39113890 None:intergenic 30.0%
AAATGAATAGACACAGTTGA+AGG + chr4_1:39113872-39113891 None:intergenic 30.0%
TTGCATCAACTAACTCAAAT+TGG - chr4_1:39113948-39113967 Msa0546790:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr4_1:39114166-39114185 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr4_1:39114317-39114336 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG + chr4_1:39114352-39114371 None:intergenic 30.0%
TGGTCTTTGATAGAACATTA+TGG - chr4_1:39114356-39114375 Msa0546790:intron 30.0%
TCTTTGATAGAACATTATGG+CGG - chr4_1:39114359-39114378 Msa0546790:intron 30.0%
AGAAAGAACACAAATCATAG+GGG - chr4_1:39114726-39114745 Msa0546790:intron 30.0%
AGTAGATTATCTGATGCAAT+AGG - chr4_1:39114851-39114870 Msa0546790:intron 30.0%
! GTATCGGATTAATTTCAAGT+TGG - chr4_1:39115041-39115060 Msa0546790:intron 30.0%
ATGCTAATCACATGAACAAT+CGG + chr4_1:39115221-39115240 None:intergenic 30.0%
ATACCATCAACAAATGCAAA+TGG - chr4_1:39115351-39115370 Msa0546790:intron 30.0%
! TTTAGAGCCAATGAAATGTA+TGG + chr4_1:39115421-39115440 None:intergenic 30.0%
! GATCTGTGATAGCATTTTTA+AGG + chr4_1:39115468-39115487 None:intergenic 30.0%
AGCTTACAAAAGAACAAATC+TGG - chr4_1:39115619-39115638 Msa0546790:intron 30.0%
GAAGAAAAAAAGTGAAGTTG+AGG + chr4_1:39115921-39115940 None:intergenic 30.0%
GATGCAAGATTTATTTCACT+TGG + chr4_1:39116179-39116198 None:intergenic 30.0%
!!! ATGCATAATTTTTTAGGGTG+GGG + chr4_1:39116412-39116431 None:intergenic 30.0%
!!! CAATGCATAATTTTTTAGGG+TGG + chr4_1:39116414-39116433 None:intergenic 30.0%
! TGCTGTTCAATTTCATTTTC+AGG - chr4_1:39116504-39116523 Msa0546790:CDS 30.0%
TTCTATTTGACATACACTCT+TGG - chr4_1:39116633-39116652 Msa0546790:CDS 30.0%
CAAATCAATAATTGCACTCT+TGG - chr4_1:39116682-39116701 Msa0546790:CDS 30.0%
TAGTCTTCAAAAACATTCCT+AGG + chr4_1:39117124-39117143 None:intergenic 30.0%
ATGTGTATTTCTTCAACCAT+TGG + chr4_1:39117288-39117307 None:intergenic 30.0%
ATACACATGCTTGAATCAAA+AGG - chr4_1:39117300-39117319 Msa0546790:CDS 30.0%
AGGCAATAACAATGTTGAAA+AGG - chr4_1:39117422-39117441 Msa0546790:CDS 30.0%
TTATTACAAACGAAGAGCAA+TGG - chr4_1:39117445-39117464 Msa0546790:CDS 30.0%
TGATCAGATTACACCAAATA+TGG - chr4_1:39117506-39117525 Msa0546790:intron 30.0%
ATCACTGTTGAATCCATATT+TGG + chr4_1:39117522-39117541 None:intergenic 30.0%
AAATATGGATTCAACAGTGA+TGG - chr4_1:39117521-39117540 Msa0546790:intron 30.0%
AATATGGATTCAACAGTGAT+GGG - chr4_1:39117522-39117541 Msa0546790:intron 30.0%
CTAATTAACCCACAAAATCA+TGG + chr4_1:39117680-39117699 None:intergenic 30.0%
!!! GTTTTCTAAAGATTTGGTGA+TGG - chr4_1:39117716-39117735 Msa0546790:five_prime_UTR 30.0%
TAAACTTTAAGTCTAGCGAA+AGG + chr4_1:39117774-39117793 None:intergenic 30.0%
!! GGGATGTTTACTTTTAAACT+TGG - chr4_1:39117861-39117880 Msa0546790:intron 30.0%
!! TATAAGTTTTGTGTCACTGT+CGG + chr4_1:39117990-39118009 None:intergenic 30.0%
TAGTTGTAATTACACAAACG+TGG + chr4_1:39118167-39118186 None:intergenic 30.0%
GATAGATAGGAAATGGAAGT+GGG + chr4_1:39108565-39108584 None:intergenic 35.0%
! ATAGATTCTTGTTTGTGTGG+AGG + chr4_1:39108587-39108606 None:intergenic 35.0%
AACTTCTTAGATTACCTTGG+TGG + chr4_1:39108613-39108632 None:intergenic 35.0%
GTGAATATACTAGATGTGAG+TGG - chr4_1:39108704-39108723 Msa0546790:three_prime_UTR 35.0%
TATACTAGATGTGAGTGGTT+TGG - chr4_1:39108709-39108728 Msa0546790:three_prime_UTR 35.0%
CTCAAATGGATCTAGTTGTT+GGG + chr4_1:39108783-39108802 None:intergenic 35.0%
ACTCAAATGGATCTAGTTGT+TGG + chr4_1:39108784-39108803 None:intergenic 35.0%
AAACTCGAGCGTTAAGAATT+TGG + chr4_1:39109002-39109021 None:intergenic 35.0%
TTTGATTACCGGAGAATCAA+AGG - chr4_1:39109030-39109049 Msa0546790:exon 35.0%
AACTTCTACCTTTGATTCTC+CGG + chr4_1:39109041-39109060 None:intergenic 35.0%
AAGGCCTTAAGTATAGTAGT+TGG - chr4_1:39109231-39109250 Msa0546790:CDS 35.0%
! GTAGTTGGAAATTTGGAATG+AGG - chr4_1:39109246-39109265 Msa0546790:CDS 35.0%
TGCATGTTGCACAACAAATT+AGG - chr4_1:39109279-39109298 Msa0546790:CDS 35.0%
TGTTAGGAAACTCTTGATTC+TGG + chr4_1:39109322-39109341 None:intergenic 35.0%
ATCATCAAGCATGTTGTTGT+TGG + chr4_1:39109429-39109448 None:intergenic 35.0%
! CTTGATGATCATGATCATGA+AGG - chr4_1:39109440-39109459 Msa0546790:CDS 35.0%
GTTTCTGTGTAAAGGATTTG+AGG + chr4_1:39109507-39109526 None:intergenic 35.0%
TAGCTGAATCAAGTAACAGT+AGG - chr4_1:39109549-39109568 Msa0546790:intron 35.0%
AGCTGAATCAAGTAACAGTA+GGG - chr4_1:39109550-39109569 Msa0546790:intron 35.0%
ATGAATCATCATGGCATTTG+GGG - chr4_1:39109686-39109705 Msa0546790:intron 35.0%
GCAAATTTGTGGACAAATAG+AGG - chr4_1:39109758-39109777 Msa0546790:intron 35.0%
TCCCTAGAAATTAGTGTTGT+TGG + chr4_1:39109929-39109948 None:intergenic 35.0%
CTACTAGTAGTAGTGGTTTA+AGG - chr4_1:39109954-39109973 Msa0546790:intron 35.0%
AGTAGTGGTTTAAGGAATGT+TGG - chr4_1:39109962-39109981 Msa0546790:intron 35.0%
ATTGTTGCATAGCCAGTAAA+TGG + chr4_1:39109998-39110017 None:intergenic 35.0%
TCTTCTAACAACTCTTGACA+AGG + chr4_1:39110046-39110065 None:intergenic 35.0%
GCAAAAGGTAGTAGTAATTC+AGG - chr4_1:39110181-39110200 Msa0546790:CDS 35.0%
AAAGGTAGTAGTAATTCAGG+TGG - chr4_1:39110184-39110203 Msa0546790:CDS 35.0%
GGTTCATCTTCAATGTTGTA+TGG - chr4_1:39110205-39110224 Msa0546790:intron 35.0%
AAAGAGAAAGAGAATAGTGG+TGG - chr4_1:39110232-39110251 Msa0546790:intron 35.0%
!! TAGTGTTAACTTGTGCCTTT+AGG - chr4_1:39110404-39110423 Msa0546790:intron 35.0%
!! AGTGTTAACTTGTGCCTTTA+GGG - chr4_1:39110405-39110424 Msa0546790:intron 35.0%
!! TTTCTTAGATTGGTCTGATG+TGG - chr4_1:39110914-39110933 Msa0546790:intron 35.0%
!!! TTATTTTTAGGTTTTGGGGG+TGG - chr4_1:39111102-39111121 Msa0546790:CDS 35.0%
!!! TATTTTTAGGTTTTGGGGGT+GGG - chr4_1:39111103-39111122 Msa0546790:CDS 35.0%
TTTATTGGGTGAAACTCATG+CGG - chr4_1:39111701-39111720 Msa0546790:intron 35.0%
TTTATTGAGTGAAACTCACG+TGG + chr4_1:39111769-39111788 None:intergenic 35.0%
!!! CTAGTGTTTTGGGATACAAA+AGG - chr4_1:39111953-39111972 Msa0546790:intron 35.0%
! TTTTTATCGGGGACTAAATC+GGG - chr4_1:39112255-39112274 Msa0546790:intron 35.0%
!! AAGAGGTGTTGCTGAAAAAT+AGG + chr4_1:39112463-39112482 None:intergenic 35.0%
CTATTTGCCACAATTCAAAG+AGG + chr4_1:39112480-39112499 None:intergenic 35.0%
! CTCACATGGATGCTTTTAAA+AGG - chr4_1:39112593-39112612 Msa0546790:intron 35.0%
! TTGATTTGACATTGTGGTGT+TGG - chr4_1:39112728-39112747 Msa0546790:intron 35.0%
!! ACATTGTGGTGTTGGTTATT+TGG - chr4_1:39112736-39112755 Msa0546790:intron 35.0%
ACAAACCAGTTGTGAAACAT+GGG + chr4_1:39112932-39112951 None:intergenic 35.0%
TACAAACCAGTTGTGAAACA+TGG + chr4_1:39112933-39112952 None:intergenic 35.0%
CTTGTGTGAATTGCAATTGA+AGG + chr4_1:39112992-39113011 None:intergenic 35.0%
TTTATGTGTCAGTGTTGTGT+TGG + chr4_1:39113148-39113167 None:intergenic 35.0%
! ATTATTACTGGTGTCAGTGT+AGG - chr4_1:39113196-39113215 Msa0546790:intron 35.0%
! TTAGATGTTGAAGTATCCCA+TGG - chr4_1:39113258-39113277 Msa0546790:intron 35.0%
GTAATAGAAGAATCTGCCAT+GGG + chr4_1:39113277-39113296 None:intergenic 35.0%
AGTAATAGAAGAATCTGCCA+TGG + chr4_1:39113278-39113297 None:intergenic 35.0%
TAATTTGGTACGAGGAAAAG+TGG + chr4_1:39113378-39113397 None:intergenic 35.0%
! AGTTTGATGGAGAAGAGTAT+TGG - chr4_1:39113414-39113433 Msa0546790:intron 35.0%
!! AAGCATTCTTGTTTGGGTTT+TGG + chr4_1:39113679-39113698 None:intergenic 35.0%
!!! CCCAAACAAGAATGCTTTTT+TGG - chr4_1:39113682-39113701 Msa0546790:intron 35.0%
! TTAGTTGATGCAACTAGGTA+GGG + chr4_1:39113941-39113960 None:intergenic 35.0%
! TTGAGTTAGTTGATGCAACT+AGG + chr4_1:39113946-39113965 None:intergenic 35.0%
AGACTAGACATGATAGGATT+AGG - chr4_1:39114107-39114126 Msa0546790:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr4_1:39114159-39114178 Msa0546790:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr4_1:39114179-39114198 Msa0546790:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr4_1:39114184-39114203 Msa0546790:intron 35.0%
TTGATCTACTCTTCTTACCA+CGG + chr4_1:39114236-39114255 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG - chr4_1:39114237-39114256 Msa0546790:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr4_1:39114240-39114259 Msa0546790:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr4_1:39114324-39114343 Msa0546790:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr4_1:39114336-39114355 Msa0546790:intron 35.0%
AATAGTGTTCTTACAGTGCA+TGG - chr4_1:39114598-39114617 Msa0546790:intron 35.0%
TGTTGTCTTGACCAATTTCT+TGG - chr4_1:39114883-39114902 Msa0546790:intron 35.0%
TATAATCGCATGTGTCAATG+CGG + chr4_1:39115143-39115162 None:intergenic 35.0%
AGCTACACCATACATTTCAT+TGG - chr4_1:39115411-39115430 Msa0546790:intron 35.0%
TACATGTCAAGTATTAGGAG+AGG - chr4_1:39115498-39115517 Msa0546790:intron 35.0%
! AAAAGAACAAATCTGGAGCT+GGG - chr4_1:39115626-39115645 Msa0546790:intron 35.0%
AGAGTGACAGAGAAAACATA+CGG + chr4_1:39115769-39115788 None:intergenic 35.0%
TCACTTGGGCATTATAGAAT+TGG + chr4_1:39116164-39116183 None:intergenic 35.0%
TAGTAAAAAACACTTGCGCA+CGG - chr4_1:39116272-39116291 Msa0546790:intron 35.0%
!!! TGCATAATTTTTTAGGGTGG+GGG + chr4_1:39116411-39116430 None:intergenic 35.0%
TGTGTTTATCAGTGTCTGTA+GGG + chr4_1:39116532-39116551 None:intergenic 35.0%
ATGTGTTTATCAGTGTCTGT+AGG + chr4_1:39116533-39116552 None:intergenic 35.0%
ATTTGACATACACTCTTGGA+TGG - chr4_1:39116637-39116656 Msa0546790:CDS 35.0%
TCAATAATTGCACTCTTGGA+TGG - chr4_1:39116686-39116705 Msa0546790:CDS 35.0%
AATAGTAGTCTAGCTGCAAA+TGG + chr4_1:39116901-39116920 None:intergenic 35.0%
ACCATCAAATCAAGATCAGA+CGG + chr4_1:39117042-39117061 None:intergenic 35.0%
CACATTGCAGTTATGCAATT+TGG + chr4_1:39117065-39117084 None:intergenic 35.0%
CAAAAACATTCCTAGGAGAA+GGG + chr4_1:39117117-39117136 None:intergenic 35.0%
TCAAAAACATTCCTAGGAGA+AGG + chr4_1:39117118-39117137 None:intergenic 35.0%
TGAAAAGCAGTTTCAGTGTT+TGG - chr4_1:39117383-39117402 Msa0546790:CDS 35.0%
CAGTTTCAGTGTTTGGAAAT+GGG - chr4_1:39117390-39117409 Msa0546790:CDS 35.0%
AGTTTCAGTGTTTGGAAATG+GGG - chr4_1:39117391-39117410 Msa0546790:CDS 35.0%
GTAGACCTTAGACATCAATT+TGG - chr4_1:39117642-39117661 Msa0546790:intron 35.0%
! CACATGATCCATGATTTTGT+GGG - chr4_1:39117669-39117688 Msa0546790:intron 35.0%
!! CTAAAGATTTGGTGATGGAA+TGG - chr4_1:39117721-39117740 Msa0546790:five_prime_UTR 35.0%
GATGGAATGGAAGGAATAAT+CGG - chr4_1:39117734-39117753 Msa0546790:five_prime_UTR 35.0%
AGTTTAGATGAATTGAGTCG+TGG - chr4_1:39117788-39117807 Msa0546790:five_prime_UTR 35.0%
! TTGTTTCTCCAGCAAATTGT+TGG + chr4_1:39117840-39117859 None:intergenic 35.0%
!! ACAATTTGCTGGAGAAACAA+AGG - chr4_1:39117840-39117859 Msa0546790:intron 35.0%
!! CAATTTGCTGGAGAAACAAA+GGG - chr4_1:39117841-39117860 Msa0546790:intron 35.0%
CTAAATACAACGTGTTTCGA+GGG - chr4_1:39118108-39118127 Msa0546790:intron 35.0%
TGTAATTACACAAACGTGGA+TGG + chr4_1:39118163-39118182 None:intergenic 35.0%
GGATAGATAGGAAATGGAAG+TGG + chr4_1:39108566-39108585 None:intergenic 40.0%
TGTGGAGGATAGATAGGAAA+TGG + chr4_1:39108572-39108591 None:intergenic 40.0%
TGTTTGTGTGGAGGATAGAT+AGG + chr4_1:39108578-39108597 None:intergenic 40.0%
CAAGAATCTATCTTCCACCA+AGG - chr4_1:39108596-39108615 Msa0546790:three_prime_UTR 40.0%
GCTAGACGATACCATAAAGT+CGG - chr4_1:39108965-39108984 Msa0546790:three_prime_UTR 40.0%
TACCATAAAGTCGGTTGTAG+AGG - chr4_1:39108974-39108993 Msa0546790:three_prime_UTR 40.0%
! ATCCTCTACAACCGACTTTA+TGG + chr4_1:39108979-39108998 None:intergenic 40.0%
! CTTAACGCTCGAGTTTTCTT+TGG - chr4_1:39109006-39109025 Msa0546790:three_prime_UTR 40.0%
TGTGCAACATGCAATTGATC+TGG + chr4_1:39109272-39109291 None:intergenic 40.0%
TCCTTTACACAGAAACCCTT+TGG - chr4_1:39109511-39109530 Msa0546790:intron 40.0%
TCCAAAGGGTTTCTGTGTAA+AGG + chr4_1:39109515-39109534 None:intergenic 40.0%
AGGCAAGAAAGAGTTGGAAT+TGG + chr4_1:39109603-39109622 None:intergenic 40.0%
ATCAGTAGGCAAGAAAGAGT+TGG + chr4_1:39109609-39109628 None:intergenic 40.0%
AGTGACAAGGATAAACCTTG+AGG + chr4_1:39109833-39109852 None:intergenic 40.0%
GACTGTACTACTAGTAGTAG+TGG - chr4_1:39109947-39109966 Msa0546790:intron 40.0%
TTAAGGAATGTTGGTCCACT+TGG - chr4_1:39109971-39109990 Msa0546790:intron 40.0%
! ACATCTCTAGAAACCCATCT+TGG + chr4_1:39110115-39110134 None:intergenic 40.0%
! TGGGTTTCTAGAGATGTTGT+TGG - chr4_1:39110118-39110137 Msa0546790:intron 40.0%
! GAAAGTGCAGTTTCTGCAAA+AGG - chr4_1:39110166-39110185 Msa0546790:CDS 40.0%
! AAAGAGAATAGTGGTGGTGA+TGG - chr4_1:39110238-39110257 Msa0546790:intron 40.0%
! ACCAGAGTGCCAAAAGAATA+AGG - chr4_1:39110303-39110322 Msa0546790:intron 40.0%
ATTACTGTACATGCACGATG+AGG - chr4_1:39110330-39110349 Msa0546790:intron 40.0%
!!! ATTTTTAGGTTTTGGGGGTG+GGG - chr4_1:39111104-39111123 Msa0546790:CDS 40.0%
! AGTTCTTTTATCCCCTAGGA+GGG + chr4_1:39111446-39111465 None:intergenic 40.0%
! TAGTTCTTTTATCCCCTAGG+AGG + chr4_1:39111447-39111466 None:intergenic 40.0%
!!! TGGATCTCACGTTTTGGAAA+TGG + chr4_1:39111749-39111768 None:intergenic 40.0%
TTAGGAGACTAATTTGGGCT+GGG + chr4_1:39112120-39112139 None:intergenic 40.0%
TTTAGGAGACTAATTTGGGC+TGG + chr4_1:39112121-39112140 None:intergenic 40.0%
CGGGTCAAAAGAAATTTGTG+AGG - chr4_1:39112274-39112293 Msa0546790:intron 40.0%
AGCAACACCTCTTTGAATTG+TGG - chr4_1:39112470-39112489 Msa0546790:intron 40.0%
GGCAAATAGTGCATTGTGAT+TGG - chr4_1:39112491-39112510 Msa0546790:intron 40.0%
AAACAATTGCACGACATGGT+TGG + chr4_1:39112870-39112889 None:intergenic 40.0%
GTATTCCCATGTTTCACAAC+TGG - chr4_1:39112924-39112943 Msa0546790:intron 40.0%
CAGAATGATGTTGTACTCAG+AGG - chr4_1:39113119-39113138 Msa0546790:intron 40.0%
TGTCGATGTCTATGTTTCGT+AGG - chr4_1:39113233-39113252 Msa0546790:intron 40.0%
!! GAACTTGGAAGCATTTCCTT+TGG + chr4_1:39113315-39113334 None:intergenic 40.0%
!!! ACCAAAGAACCCTGCTTTTT+TGG - chr4_1:39113843-39113862 Msa0546790:intron 40.0%
TCCAAAAAAGCAGGGTTCTT+TGG + chr4_1:39113847-39113866 None:intergenic 40.0%
TGAAGGGTTCCAAAAAAGCA+GGG + chr4_1:39113855-39113874 None:intergenic 40.0%
TTGAAGGGTTCCAAAAAAGC+AGG + chr4_1:39113856-39113875 None:intergenic 40.0%
! GTTAGTTGATGCAACTAGGT+AGG + chr4_1:39113942-39113961 None:intergenic 40.0%
GTGGTAAGACTAGACATGAT+AGG - chr4_1:39114101-39114120 Msa0546790:intron 40.0%
TGACATCATTAGAGAGAGAG+TGG - chr4_1:39114132-39114151 Msa0546790:intron 40.0%
GACATCATTAGAGAGAGAGT+GGG - chr4_1:39114133-39114152 Msa0546790:intron 40.0%
ACATCATTAGAGAGAGAGTG+GGG - chr4_1:39114134-39114153 Msa0546790:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr4_1:39114265-39114284 Msa0546790:intron 40.0%
TAGTGTCAATGTCATGTCTG+AGG - chr4_1:39115194-39115213 Msa0546790:intron 40.0%
! CCACCATTTGCATTTGTTGA+TGG + chr4_1:39115357-39115376 None:intergenic 40.0%
CCATCAACAAATGCAAATGG+TGG - chr4_1:39115354-39115373 Msa0546790:intron 40.0%
! TTACTGCTACTTGTGGTTGT+TGG + chr4_1:39115538-39115557 None:intergenic 40.0%
! CAAAAGAACAAATCTGGAGC+TGG - chr4_1:39115625-39115644 Msa0546790:intron 40.0%
AACCTCAACAACAGCATGTT+TGG - chr4_1:39115671-39115690 Msa0546790:intron 40.0%
AGAATTGCCACTGATCTTTC+AGG + chr4_1:39115715-39115734 None:intergenic 40.0%
CAGTGGCAATTCTTAAAGCT+TGG - chr4_1:39115722-39115741 Msa0546790:intron 40.0%
!!! TTTTTTAGGGTGGGGGAAAT+TGG + chr4_1:39116404-39116423 None:intergenic 40.0%
CACATGTTAGCTACTCAAAC+AGG - chr4_1:39116548-39116567 Msa0546790:CDS 40.0%
AACAGGTCTATCAAGAAACC+AGG - chr4_1:39116565-39116584 Msa0546790:CDS 40.0%
CCATATTGCTTAGCTGCAAA+TGG + chr4_1:39116948-39116967 None:intergenic 40.0%
CCATTTGCAGCTAAGCAATA+TGG - chr4_1:39116945-39116964 Msa0546790:CDS 40.0%
AATGTGAGTCATCCATCTGA+TGG + chr4_1:39116976-39116995 None:intergenic 40.0%
! TCCGTCTGATCTTGATTTGA+TGG - chr4_1:39117038-39117057 Msa0546790:CDS 40.0%
TGATCTTTATCCCTTCTCCT+AGG - chr4_1:39117104-39117123 Msa0546790:CDS 40.0%
!! CAACCATTGGTTTCCATACA+CGG + chr4_1:39117275-39117294 None:intergenic 40.0%
AAAAATGAGGCATGCAGAGT+CGG - chr4_1:39117354-39117373 Msa0546790:CDS 40.0%
GCAGTTTCAGTGTTTGGAAA+TGG - chr4_1:39117389-39117408 Msa0546790:CDS 40.0%
GCTCTCCAAATTGATGTCTA+AGG + chr4_1:39117650-39117669 None:intergenic 40.0%
! GCACATGATCCATGATTTTG+TGG - chr4_1:39117668-39117687 Msa0546790:intron 40.0%
!! AGATTTGGTGATGGAATGGA+AGG - chr4_1:39117725-39117744 Msa0546790:five_prime_UTR 40.0%
TTAGATGAATTGAGTCGTGG+AGG - chr4_1:39117791-39117810 Msa0546790:five_prime_UTR 40.0%
CAATGTTTCATTGTCGCGTT+CGG - chr4_1:39118057-39118076 Msa0546790:intron 40.0%
GCTAAATACAACGTGTTTCG+AGG - chr4_1:39118107-39118126 Msa0546790:intron 40.0%
! GTTTCGAGGGCTTTTCATTT+CGG - chr4_1:39118121-39118140 Msa0546790:five_prime_UTR 40.0%
ATTACACAAACGTGGATGGA+GGG + chr4_1:39118159-39118178 None:intergenic 40.0%
AATTACACAAACGTGGATGG+AGG + chr4_1:39118160-39118179 None:intergenic 40.0%
AGATAGGAAATGGAAGTGGG+AGG + chr4_1:39108562-39108581 None:intergenic 45.0%
TTATTGAAGCCTGCAGGTTG+TGG + chr4_1:39109380-39109399 None:intergenic 45.0%
ACCTGCAGGCTTCAATAACT+TGG - chr4_1:39109382-39109401 Msa0546790:CDS 45.0%
TCCAAGTTATTGAAGCCTGC+AGG + chr4_1:39109386-39109405 None:intergenic 45.0%
AATCATCATGGCATTTGGGG+AGG - chr4_1:39109689-39109708 Msa0546790:intron 45.0%
CGAAGATGAAGTTGAGGGTT+TGG + chr4_1:39109873-39109892 None:intergenic 45.0%
TAGCCAGTAAATGGTCCAAG+TGG + chr4_1:39109989-39110008 None:intergenic 45.0%
!! GTTGTTGGTTGTTCTAGCTC+TGG - chr4_1:39110133-39110152 Msa0546790:intron 45.0%
!! GCCTTATTCTTTTGGCACTC+TGG + chr4_1:39110307-39110326 None:intergenic 45.0%
!!! TTTTTAGGTTTTGGGGGTGG+GGG - chr4_1:39111105-39111124 Msa0546790:CDS 45.0%
AGTGCCTATTATCCCTCCTA+GGG - chr4_1:39111431-39111450 Msa0546790:intron 45.0%
TATCCCCTAGGAGGGATAAT+AGG + chr4_1:39111438-39111457 None:intergenic 45.0%
! TGTGTGTGTGTGTATTGGTC+GGG + chr4_1:39112573-39112592 None:intergenic 45.0%
! GTGTGTGTGTGTGTATTGGT+CGG + chr4_1:39112574-39112593 None:intergenic 45.0%
GTGAGTGTGTGTGTGTGTAT+TGG + chr4_1:39112578-39112597 None:intergenic 45.0%
TACACACACACACACTCACA+TGG - chr4_1:39112579-39112598 Msa0546790:intron 45.0%
! CTATTTTCTGTCTGTGGGGT+TGG - chr4_1:39112667-39112686 Msa0546790:intron 45.0%
TGGGAAACAATTGCACGACA+TGG + chr4_1:39112874-39112893 None:intergenic 45.0%
! TCCATATATGGACTGTGCAC+TGG - chr4_1:39113072-39113091 Msa0546790:intron 45.0%
ACCAGTGCACAGTCCATATA+TGG + chr4_1:39113076-39113095 None:intergenic 45.0%
! ACGGCTTAATGCAGTTGATG+TGG - chr4_1:39113456-39113475 Msa0546790:intron 45.0%
TAAAGCTCAGCCACATCTTG+TGG + chr4_1:39113548-39113567 None:intergenic 45.0%
CAAGATGTGGCTGAGCTTTA+AGG - chr4_1:39113548-39113567 Msa0546790:intron 45.0%
ATGACACCCAAGCAATGTCA+TGG + chr4_1:39113717-39113736 None:intergenic 45.0%
! TGACATTGCTTGGGTGTCAT+TGG - chr4_1:39113717-39113736 Msa0546790:intron 45.0%
CACCCATCAACACACATCAA+CGG + chr4_1:39113763-39113782 None:intergenic 45.0%
! TTGATGTGTGTTGATGGGTG+TGG - chr4_1:39113763-39113782 Msa0546790:intron 45.0%
! TGATGTGTGTTGATGGGTGT+GGG - chr4_1:39113764-39113783 Msa0546790:intron 45.0%
! ATGTGTGTGTGTGATGGAGA+TGG - chr4_1:39113788-39113807 Msa0546790:intron 45.0%
!! TTGTGTGTCATTGGTGCCAT+TGG + chr4_1:39113816-39113835 None:intergenic 45.0%
GCACCAATGACACACAACTA+TGG - chr4_1:39113819-39113838 Msa0546790:intron 45.0%
GTGCCATAGTTGTGTGTCAT+TGG + chr4_1:39113825-39113844 None:intergenic 45.0%
! TGCTACTTCAGAGCCATGTA+TGG - chr4_1:39114001-39114020 Msa0546790:intron 45.0%
CTTCAGAGCCATGTATGGTA+CGG - chr4_1:39114006-39114025 Msa0546790:intron 45.0%
! CATGTATGGTACGGAGTGTT+GGG - chr4_1:39114015-39114034 Msa0546790:intron 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr4_1:39114051-39114070 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr4_1:39114054-39114073 Msa0546790:intron 45.0%
CATCATTAGAGAGAGAGTGG+GGG - chr4_1:39114135-39114154 Msa0546790:intron 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr4_1:39114249-39114268 Msa0546790:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr4_1:39114259-39114278 Msa0546790:intron 45.0%
AACGCCTTATCCCACTAAGT+GGG + chr4_1:39114406-39114425 None:intergenic 45.0%
TCATCGTTTGAGTCAGTAGC+TGG - chr4_1:39115379-39115398 Msa0546790:intron 45.0%
CTCCAAACATGCTGTTGTTG+AGG + chr4_1:39115676-39115695 None:intergenic 45.0%
CTCAACAACAGCATGTTTGG+AGG - chr4_1:39115674-39115693 Msa0546790:intron 45.0%
! TCTTTCAGGTAACCCTCTCT+GGG + chr4_1:39115701-39115720 None:intergenic 45.0%
! ATCTTTCAGGTAACCCTCTC+TGG + chr4_1:39115702-39115721 None:intergenic 45.0%
AGGGTTACCTGAAAGATCAG+TGG - chr4_1:39115705-39115724 Msa0546790:intron 45.0%
AGGTCTATCAAGAAACCAGG+TGG - chr4_1:39116568-39116587 Msa0546790:CDS 45.0%
GGTCTATCAAGAAACCAGGT+GGG - chr4_1:39116569-39116588 Msa0546790:CDS 45.0%
GTCTATCAAGAAACCAGGTG+GGG - chr4_1:39116570-39116589 Msa0546790:CDS 45.0%
TCTATCAAGAAACCAGGTGG+GGG - chr4_1:39116571-39116590 Msa0546790:CDS 45.0%
AATATGGACCGTCCATCAGA+TGG - chr4_1:39116961-39116980 Msa0546790:CDS 45.0%
TGAGTCATCCATCTGATGGA+CGG + chr4_1:39116972-39116991 None:intergenic 45.0%
GGGATAAAGATCACTTGCAG+CGG + chr4_1:39117097-39117116 None:intergenic 45.0%
AGTCCGTGTATGGAAACCAA+TGG - chr4_1:39117269-39117288 Msa0546790:CDS 45.0%
TTGGAAATGGGGTCATCTTC+AGG - chr4_1:39117402-39117421 Msa0546790:CDS 45.0%
!! GGTTTTATGCCGTATCAACG+TGG - chr4_1:39117543-39117562 Msa0546790:intron 45.0%
GATACGGATCCACGTTGATA+CGG + chr4_1:39117555-39117574 None:intergenic 45.0%
TGGAAGGAATAATCGGAACG+AGG - chr4_1:39117741-39117760 Msa0546790:five_prime_UTR 45.0%
ATGAATTGAGTCGTGGAGGT+TGG - chr4_1:39117795-39117814 Msa0546790:five_prime_UTR 45.0%
TTGGCCAGAGTGAAATATGC+TGG - chr4_1:39117814-39117833 Msa0546790:five_prime_UTR 45.0%
TTGGCCAGCATATTTCACTC+TGG + chr4_1:39117821-39117840 None:intergenic 45.0%
TATGCTGGCCAACAATTTGC+TGG - chr4_1:39117829-39117848 Msa0546790:intron 45.0%
GTTGGTACCTCAACTTTGAG+GGG + chr4_1:39117892-39117911 None:intergenic 45.0%
! GGTTGGTACCTCAACTTTGA+GGG + chr4_1:39117893-39117912 None:intergenic 45.0%
! CTCAAAGTTGAGGTACCAAC+CGG - chr4_1:39117892-39117911 Msa0546790:intron 45.0%
GCTACTTACTACTCGCAAAC+CGG + chr4_1:39117914-39117933 None:intergenic 45.0%
!! TTTTGTGTCACTGTCGGACT+TGG + chr4_1:39117984-39118003 None:intergenic 45.0%
AAGTGGGAGGAAGCAAAGCA+AGG + chr4_1:39108549-39108568 None:intergenic 50.0%
!! AGAGAGATCAAGGGCTAGCT+AGG - chr4_1:39108811-39108830 Msa0546790:three_prime_UTR 50.0%
!! GAGAGATCAAGGGCTAGCTA+GGG - chr4_1:39108812-39108831 Msa0546790:three_prime_UTR 50.0%
ATCATGGCATTTGGGGAGGT+GGG - chr4_1:39109693-39109712 Msa0546790:intron 50.0%
GGTCCACTTGGACCATTTAC+TGG - chr4_1:39109983-39110002 Msa0546790:intron 50.0%
!! GTTGGTTGTTCTAGCTCTGG+TGG - chr4_1:39110136-39110155 Msa0546790:intron 50.0%
!! GAGAATAGTGGTGGTGATGG+AGG - chr4_1:39110241-39110260 Msa0546790:intron 50.0%
!! AGTGGTGGTGATGGAGGAAT+TGG - chr4_1:39110247-39110266 Msa0546790:intron 50.0%
!! GTGGTGGTGATGGAGGAATT+GGG - chr4_1:39110248-39110267 Msa0546790:intron 50.0%
GAGTGCCTATTATCCCTCCT+AGG - chr4_1:39111430-39111449 Msa0546790:intron 50.0%
GTGCCTATTATCCCTCCTAG+GGG - chr4_1:39111432-39111451 Msa0546790:intron 50.0%
! CTCACGTGGATCTCACGTTT+TGG + chr4_1:39111755-39111774 None:intergenic 50.0%
! TGGTCTTGGATGTGACTGTG+TGG - chr4_1:39112826-39112845 Msa0546790:intron 50.0%
GGTCTTGGATGTGACTGTGT+GGG - chr4_1:39112827-39112846 Msa0546790:intron 50.0%
GTCTTGGATGTGACTGTGTG+GGG - chr4_1:39112828-39112847 Msa0546790:intron 50.0%
! AGTTGATGTGGCCGTTATCG+CGG - chr4_1:39113468-39113487 Msa0546790:intron 50.0%
CGACATTGCAACCGCGATAA+CGG + chr4_1:39113482-39113501 None:intergenic 50.0%
CAGTTGTGCACCACAAGATG+TGG - chr4_1:39113535-39113554 Msa0546790:intron 50.0%
!! TTGGGTGTCATTGGTGCCAT+TGG - chr4_1:39113726-39113745 Msa0546790:intron 50.0%
ATCAACACACATCAACGGCC+AGG + chr4_1:39113758-39113777 None:intergenic 50.0%
TGGCCGTTGATGTGTGTTGA+TGG - chr4_1:39113757-39113776 Msa0546790:intron 50.0%
! GGCCGTTGATGTGTGTTGAT+GGG - chr4_1:39113758-39113777 Msa0546790:intron 50.0%
! GATGTGTGTTGATGGGTGTG+GGG - chr4_1:39113765-39113784 Msa0546790:intron 50.0%
! TGTGATGGAGATGGCACCAA+TGG - chr4_1:39113797-39113816 Msa0546790:intron 50.0%
CCAACACTCCGTACCATACA+TGG + chr4_1:39114017-39114036 None:intergenic 50.0%
CCATGTATGGTACGGAGTGT+TGG - chr4_1:39114014-39114033 Msa0546790:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - chr4_1:39114062-39114081 Msa0546790:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG - chr4_1:39114082-39114101 Msa0546790:intron 50.0%
TCTTCTTACCACGGCGTCTA+CGG + chr4_1:39114227-39114246 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr4_1:39114401-39114420 None:intergenic 50.0%
ACGCCTTATCCCACTAAGTG+GGG + chr4_1:39114405-39114424 None:intergenic 50.0%
CAACGCCTTATCCCACTAAG+TGG + chr4_1:39114407-39114426 None:intergenic 50.0%
! CTTTCAGGTAACCCTCTCTG+GGG + chr4_1:39115700-39115719 None:intergenic 50.0%
GGGGGAAATTGGTCAGTAGT+AGG + chr4_1:39116393-39116412 None:intergenic 50.0%
AAAGATCACTTGCAGCGGCA+AGG + chr4_1:39117092-39117111 None:intergenic 50.0%
TAAACGCTCGAGTCCGTGTA+TGG - chr4_1:39117259-39117278 Msa0546790:CDS 50.0%
!! TGGATCCGTATCGCTGACTT+TGG - chr4_1:39117563-39117582 Msa0546790:intron 50.0%
!! GGATCCGTATCGCTGACTTT+GGG - chr4_1:39117564-39117583 Msa0546790:intron 50.0%
GAGACCCAAAGTCAGCGATA+CGG + chr4_1:39117571-39117590 None:intergenic 50.0%
CTGACTTTGGGTCTCAGACA+CGG - chr4_1:39117576-39117595 Msa0546790:intron 50.0%
! CGGTTGGTACCTCAACTTTG+AGG + chr4_1:39117894-39117913 None:intergenic 50.0%
CTTACTACTCGCAAACCGGT+TGG + chr4_1:39117910-39117929 None:intergenic 50.0%
CACCAAACACCACAACCTGC+AGG - chr4_1:39109368-39109387 Msa0546790:CDS 55.0%
AGCCTGCAGGTTGTGGTGTT+TGG + chr4_1:39109373-39109392 None:intergenic 55.0%
CATCATGGCATTTGGGGAGG+TGG - chr4_1:39109692-39109711 Msa0546790:intron 55.0%
!! TGGTGCCATTGGTGCAATCC+TGG - chr4_1:39113737-39113756 Msa0546790:intron 55.0%
AACGGCCAGGATTGCACCAA+TGG + chr4_1:39113745-39113764 None:intergenic 55.0%
GTGGGGATGTGTGTGTGTGA+TGG - chr4_1:39113782-39113801 Msa0546790:intron 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG - chr4_1:39114018-39114037 Msa0546790:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG - chr4_1:39114074-39114093 Msa0546790:intron 55.0%
CTTCTTACCACGGCGTCTAC+GGG + chr4_1:39114226-39114245 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr4_1:39114393-39114412 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr4_1:39114392-39114411 Msa0546790:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr4_1:39114393-39114412 Msa0546790:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr4_1:39114399-39114418 Msa0546790:intron 55.0%
ATGTTTGGAGGCCCCAGAGA+GGG - chr4_1:39115686-39115705 Msa0546790:intron 55.0%
TGAGTAAGTAGACCCCCACC+TGG + chr4_1:39116586-39116605 None:intergenic 55.0%
GCAGCAACATCAGTTGCAGC+AGG - chr4_1:39117617-39117636 Msa0546790:intron 55.0%
GCAACATCAGTTGCAGCAGG+AGG - chr4_1:39117620-39117639 Msa0546790:intron 55.0%
GGCAAAGCCCCTCAAAGTTG+AGG - chr4_1:39117882-39117901 Msa0546790:intron 55.0%
!!! TTAGGTTTTGGGGGTGGGGG+TGG - chr4_1:39111108-39111127 Msa0546790:CDS 60.0%
CATGTTTGGAGGCCCCAGAG+AGG - chr4_1:39115685-39115704 Msa0546790:intron 60.0%
GAGAAGACCCGTAGACGCCG+TGG - chr4_1:39114216-39114235 Msa0546790:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 39108512 39118220 39108512 ID=Msa0546790;Name=Msa0546790
chr4_1 mRNA 39108512 39118220 39108512 ID=Msa0546790-mRNA-1;Parent=Msa0546790;Name=Msa0546790-mRNA-1;_AED=0.00;_eAED=0.00;_QI=305|1|1|1|0.4|0.5|6|525|679
chr4_1 exon 39108512 39109489 39108512 ID=Msa0546790-mRNA-1:exon:9956;Parent=Msa0546790-mRNA-1
chr4_1 exon 39110146 39110206 39110146 ID=Msa0546790-mRNA-1:exon:9955;Parent=Msa0546790-mRNA-1
chr4_1 exon 39110965 39111401 39110965 ID=Msa0546790-mRNA-1:exon:9954;Parent=Msa0546790-mRNA-1
chr4_1 exon 39116381 39117507 39116381 ID=Msa0546790-mRNA-1:exon:9953;Parent=Msa0546790-mRNA-1
chr4_1 exon 39117681 39117841 39117681 ID=Msa0546790-mRNA-1:exon:9952;Parent=Msa0546790-mRNA-1
chr4_1 exon 39118115 39118220 39118115 ID=Msa0546790-mRNA-1:exon:9951;Parent=Msa0546790-mRNA-1
chr4_1 five_prime_UTR 39118115 39118220 39118115 ID=Msa0546790-mRNA-1:five_prime_utr;Parent=Msa0546790-mRNA-1
chr4_1 five_prime_UTR 39117681 39117841 39117681 ID=Msa0546790-mRNA-1:five_prime_utr;Parent=Msa0546790-mRNA-1
chr4_1 five_prime_UTR 39117470 39117507 39117470 ID=Msa0546790-mRNA-1:five_prime_utr;Parent=Msa0546790-mRNA-1
chr4_1 CDS 39116381 39117469 39116381 ID=Msa0546790-mRNA-1:cds;Parent=Msa0546790-mRNA-1
chr4_1 CDS 39110965 39111401 39110965 ID=Msa0546790-mRNA-1:cds;Parent=Msa0546790-mRNA-1
chr4_1 CDS 39110146 39110206 39110146 ID=Msa0546790-mRNA-1:cds;Parent=Msa0546790-mRNA-1
chr4_1 CDS 39109037 39109489 39109037 ID=Msa0546790-mRNA-1:cds;Parent=Msa0546790-mRNA-1
chr4_1 three_prime_UTR 39108512 39109036 39108512 ID=Msa0546790-mRNA-1:three_prime_utr;Parent=Msa0546790-mRNA-1
Gene Sequence

>Msa0546790

ATGAGGCCAGATCAATTGCATGTTGCACAACAAATTAGGAGAGACAAATTGAGGATCCAGAATCAAGAGTTTCCTAACAACAACATTGAACAATTGTTATCATTACACCAAACACCACAACCTGCAGGCTTCAATAACTTGGATCTTCTTCATCTCAGAAATGCCAACAACAACATGCTTGATGATCATGATCATGAAGGTCTTTATTCATCTAGTCAAATGATAAATAGTTTTTCATCACCCTCAAATCCTTTACACAGAAACCCTTTGGAATATTGTCATGAACTAGCTGAATCAAGTAACAGTAGGGTAAATTATTATTATGAAAATCATGAAACCAATTCCAACTCTTTCTTGCCTACTGATATTTTCAAGTCTTCAACATCCATTAGTTCACATAGTACTTCAGAAATGGCTTCTTTAATGAATCATCATGGCATTTGGGGAGGTGGGAATAGTCATAATCCTATTATACCTGTATTTCATGAAAATCAAGCAAATTTGTGGACAAATAGAGGTGTAACTGTTGAAAACAACAACATGAATTCTTTCTTTACTGATTACAATCCTCAAGGTTTATCCTTGTCACTTTCATCAAATTCACAATCCAAACCCTCAACTTCATCTTCGAATTTTGAACAAAGTTCTTTAAATGCTGTGAAACCAACAACACTAATTTCTAGGGACTGTACTACTAGTAGTAGTGGTTTAAGGAATGTTGGTCCACTTGGACCATTTACTGGCTATGCAACAATTTTGAAGAATTCAAGGTATTTGAAACCTTGTCAAGAGTTGTTAGAAGAATGTTGTTGCTTTGTTAAATCCTTTGATAATAATAATAACAATGTTCCAAGATGGGTTTCTAGAGATGTTGTTGGTTGTTCTAGCTCTGGTGGTGTTGATGAAAGTGCAGTTTCTGCAAAAGGTAGTAGTAATTCAGGTGGTTCATCTTCAATGTTGTATGGTTCAAAAGAGAAAGAGAATAGTGGTGGTGATGGAGGAATTGGGAATAACTTTTGTCTTTCTTCTTCTTCTTCTCGACCAGAGTGCCAAAAGAATAAGGCTCAATTACTGTACATGCACGATGAGGTTACAAGAAGGTACAAGCAATACCATCAACAAATGCAAATGGTGGTTTCATCGTTTGAGTCAGTAGCTGGTCTAAGTTCAGCTACACCATACATTTCATTGGCTCTAAAGTCACTATCAAGACACTTCAGATGCCTTAAAAATGCTATCACAGATCAACTCAAACTTACATGTCAAGTATTAGGAGAGGACTTTTCAATACTACCAACAACCACAAGTAGCAGTAATAAATTTGACAGTAATAATAATAATAATATGACAAGGCTAAGATGCATGAATCATCACCATAGCTTACAAAAGAACAAATCTGGAGCTGGGAATAGTAATGTAGACTTTGTTGAACCTCAACAACAGCATGTTTGGAGGCCCCAGAGAGGGTTACCTGAAAGATCAGTGGCAATTCTTAAAGCTTGGTTATTTGAGCATTTTCTTCATCCGTACCCTACAGACACTGATAAACACATGTTAGCTACTCAAACAGGTCTATCAAGAAACCAGGTATCAAATTGGTTCATAAACGCTCGAGTCCGTGTATGGAAACCAATGGTTGAAGAAATACACATGCTTGAATCAAAAGGCACAGCAGAAGCTCAGAATCAAAACAATGATAAAAATGAGGCATGCAGAGTCGGAACGCATGAAAAGCAGTTTCAGTGTTTGGAAATGGGGTCATCTTCAGGCAATAACAATGTTGAAAAGGTTATTACAAACGAAGAGCAATGGATTAATAATATTCAAGAGAAGAGGTCTAAATTAGAAAGTGATCAGATTACACCAAATATGGATTCAACAGTGATGGGTTTTATGCCGTATCAACGTGGATCCGTATCGCTGACTTTGGGTCTCAGACACGGCGTTGAAAGTGTACAACAGCAGCAACATCAGTTGCAGCAGGAGGTAGACCTTAGACATCAATTTGGAGAGCACATGATCCATGATTTTGTGGGTTAA
Protein sequence

>Msa0546790

MRPDQLHVAQQIRRDKLRIQNQEFPNNNIEQLLSLHQTPQPAGFNNLDLLHLRNANNNMLDDHDHEGLYSSSQMINSFSSPSNPLHRNPLEYCHELAESSNSRVNYYYENHETNSNSFLPTDIFKSSTSISSHSTSEMASLMNHHGIWGGGNSHNPIIPVFHENQANLWTNRGVTVENNNMNSFFTDYNPQGLSLSLSSNSQSKPSTSSSNFEQSSLNAVKPTTLISRDCTTSSSGLRNVGPLGPFTGYATILKNSRYLKPCQELLEECCCFVKSFDNNNNNVPRWVSRDVVGCSSSGGVDESAVSAKGSSNSGGSSSMLYGSKEKENSGGDGGIGNNFCLSSSSSRPECQKNKAQLLYMHDEVTRRYKQYHQQMQMVVSSFESVAGLSSATPYISLALKSLSRHFRCLKNAITDQLKLTCQVLGEDFSILPTTTSSSNKFDSNNNNNMTRLRCMNHHHSLQKNKSGAGNSNVDFVEPQQQHVWRPQRGLPERSVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLESKGTAEAQNQNNDKNEACRVGTHEKQFQCLEMGSSSGNNNVEKVITNEEQWINNIQEKRSKLESDQITPNMDSTVMGFMPYQRGSVSLTLGLRHGVESVQQQQHQLQQEVDLRHQFGEHMIHDFVG*