Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0681770 | XP_013455907.1 | 98.630 | 438 | 4 | 2 | 1 | 438 | 1 | 436 | 0.0 | 886 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0681770 | sp|P93231|VPS41_SOLLC | 82.116 | 397 | 70 | 1 | 42 | 438 | 36 | 431 | 0.0 | 699 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0681770 | A0A072ULK5 | 98.630 | 438 | 4 | 2 | 1 | 438 | 1 | 436 | 0.0 | 886 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0681770 | Msa0685620 | 0.809510 | 1.826293e-50 | -8.615850e-47 |
| Msa0681770 | Msa0705500 | 0.800769 | 1.233755e-48 | -8.615850e-47 |
| Msa0681770 | Msa1464540 | 0.843429 | 1.408662e-58 | -8.615850e-47 |
| Msa0383950 | Msa0681770 | 0.800996 | 1.108996e-48 | -8.615850e-47 |
| Msa0434470 | Msa0681770 | 0.804506 | 2.090954e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0681770 | MtrunA17_Chr4g0027711 | 98.630 | 438 | 4 | 2 | 1 | 438 | 1 | 436 | 0.0 | 886 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0681770 | AT1G08190.1 | 77.045 | 440 | 96 | 4 | 1 | 438 | 1 | 437 | 0.0 | 666 |
Find 137 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGTTCTTGCTTATATTCC+TGG | 0.231578 | 4_4:-42449754 | Msa0681770:CDS |
| ATGCCCCATTGGTGGATTTA+TGG | 0.244861 | 4_4:+42449878 | None:intergenic |
| TGCCCCATTTGGTGATTCTT+TGG | 0.247967 | 4_4:-42449776 | Msa0681770:CDS |
| GATGACACCGTCTTAGTTAT+TGG | 0.259194 | 4_4:-42449943 | Msa0681770:CDS |
| ATCTCAGGACTTGCCCCATT+TGG | 0.317905 | 4_4:-42449787 | Msa0681770:CDS |
| TTGCAATAACTACATCCTTT+GGG | 0.330866 | 4_4:+42447727 | None:intergenic |
| TATATTTAAATTCGAAGAAA+TGG | 0.333752 | 4_4:-42450583 | Msa0681770:CDS |
| TTTGCAATAACTACATCCTT+TGG | 0.343267 | 4_4:+42447726 | None:intergenic |
| TGATGCCGCGTCTTGTGTTT+CGG | 0.366979 | 4_4:-42451763 | Msa0681770:CDS |
| GCCATTCGGATTGTTATTCC+CGG | 0.381150 | 4_4:+42451957 | None:intergenic |
| AGCTGTGGTTGAATCTAGTC+AGG | 0.392289 | 4_4:-42446513 | Msa0681770:CDS |
| GCCCATGAAGGCGATTGCTT+TGG | 0.393283 | 4_4:-42450666 | Msa0681770:CDS |
| CTTGCTCACGCTCCCTTCTC+AGG | 0.394326 | 4_4:-42448808 | Msa0681770:intron |
| GTCCAAAGCAATCGCCTTCA+TGG | 0.401493 | 4_4:+42450664 | None:intergenic |
| TTTATTGCTGGTGGTTTAGC+TGG | 0.404355 | 4_4:-42450611 | Msa0681770:CDS |
| ATCGCGCTTGGTACTCAGGC+TGG | 0.405531 | 4_4:-42451726 | Msa0681770:CDS |
| CAAACCAGCTATTTCATCTC+AGG | 0.405842 | 4_4:-42449802 | Msa0681770:CDS |
| GCCGGTGGTCAGTGGGCTGC+AGG | 0.408261 | 4_4:-42447777 | Msa0681770:CDS |
| ACGCCGTTCTCCGGTGGAAT+CGG | 0.408673 | 4_4:+42451933 | None:intergenic |
| GATTCCTCACTTGGTTTGGC+AGG | 0.409605 | 4_4:-42450284 | Msa0681770:intron |
| TTAAATTCGAAGAAATGGTT+TGG | 0.411812 | 4_4:-42450578 | Msa0681770:CDS |
| ACGTCTAGGGGATTTATTGC+TGG | 0.412804 | 4_4:-42450623 | Msa0681770:CDS |
| AAATGTTATTCGCCGGTCAT+TGG | 0.413641 | 4_4:+42450345 | None:intergenic |
| GTAGATCTGTTTCGTTGCGC+TGG | 0.413722 | 4_4:+42452038 | None:intergenic |
| GACTTGGAAGGGGAATATAT+TGG | 0.415885 | 4_4:-42450764 | Msa0681770:CDS |
| CATGATACTACTCTTACTTC+AGG | 0.420043 | 4_4:+42448904 | None:intergenic |
| GAGAGCAAGTCTTGTTGCTT+GGG | 0.420187 | 4_4:-42450401 | Msa0681770:CDS |
| TACTTGCAAGTTCCTGTGCT+TGG | 0.436789 | 4_4:-42449856 | Msa0681770:CDS |
| TCGCCGTCGACGCCGTTCTC+CGG | 0.447172 | 4_4:+42451924 | None:intergenic |
| ACACCGTCTTAGTTATTGGC+TGG | 0.447866 | 4_4:-42449939 | Msa0681770:CDS |
| CGTCGGAAAAGTTTGTTTAA+CGG | 0.449490 | 4_4:+42451989 | None:intergenic |
| CTTGGCTTCTTCAACATGGA+TGG | 0.450751 | 4_4:-42446550 | Msa0681770:CDS |
| AATTTGTATGATTATTATGT+TGG | 0.451208 | 4_4:-42446428 | Msa0681770:CDS |
| GTATTTAACTTTAAGTTTGT+CGG | 0.453921 | 4_4:-42446467 | Msa0681770:CDS |
| AAGTGAGGAATCAAAAGCTC+GGG | 0.468986 | 4_4:+42450295 | None:intergenic |
| CCGGTGGAATCGGTGCCATT+CGG | 0.471259 | 4_4:+42451943 | None:intergenic |
| TTATCTCCATCTTCTTCTCC+AGG | 0.474171 | 4_4:+42449736 | None:intergenic |
| CAACCAAAGAATCACCAAAT+GGG | 0.475399 | 4_4:+42449773 | None:intergenic |
| TTAGTAGCACAGCTCCTTCA+CGG | 0.476596 | 4_4:-42449708 | Msa0681770:CDS |
| GATGATCGCGCTTGGTACTC+AGG | 0.476672 | 4_4:-42451730 | Msa0681770:CDS |
| CACCGTCTTAGTTATTGGCT+GGG | 0.480140 | 4_4:-42449938 | Msa0681770:CDS |
| AAGCCAAGCAATATGATCTT+CGG | 0.481074 | 4_4:+42446565 | None:intergenic |
| GGAGAGCAAGTCTTGTTGCT+TGG | 0.482236 | 4_4:-42450402 | Msa0681770:CDS |
| AACCTTCACTCCGACATCAT+TGG | 0.485832 | 4_4:+42450378 | None:intergenic |
| ATCACCATAAATCCACCAAT+GGG | 0.486427 | 4_4:-42449882 | Msa0681770:CDS |
| GAGGCTGAAGTATCAGAGAA+TGG | 0.487391 | 4_4:-42451814 | Msa0681770:CDS |
| ATTTGTATGATTATTATGTT+GGG | 0.492263 | 4_4:-42446427 | Msa0681770:CDS |
| CAGTTATGCCGGTGGTCAGT+GGG | 0.494539 | 4_4:-42447784 | Msa0681770:CDS |
| AGACGAAGAGGAAGATGAAG+AGG | 0.494710 | 4_4:-42451886 | Msa0681770:CDS |
| GCAGTTATGCCGGTGGTCAG+TGG | 0.494777 | 4_4:-42447785 | Msa0681770:CDS |
| ACAACCAAAGAATCACCAAA+TGG | 0.495322 | 4_4:+42449772 | None:intergenic |
| GGGGATACAATATAGTATAG+TGG | 0.495715 | 4_4:+42447747 | None:intergenic |
| TAGATCTGTTTCGTTGCGCT+GGG | 0.501608 | 4_4:+42452039 | None:intergenic |
| TAATGCTCAAACCCGTGTAC+TGG | 0.509126 | 4_4:+42448850 | None:intergenic |
| AATGAAATGTTAACCTGAGA+AGG | 0.511663 | 4_4:+42448795 | None:intergenic |
| AACATTTATTGAAAGACCAC+GGG | 0.515270 | 4_4:-42450329 | Msa0681770:CDS |
| CCGTCGACGCCGTTCTCCGG+TGG | 0.515374 | 4_4:+42451927 | None:intergenic |
| CTGAAGTAAGAGTAGTATCA+TGG | 0.516689 | 4_4:-42448903 | Msa0681770:CDS |
| TGGAGAAGAAGATGGAGATA+AGG | 0.517809 | 4_4:-42449734 | Msa0681770:CDS |
| AGAAATGGTTTGGCTATCAT+CGG | 0.517809 | 4_4:-42450568 | Msa0681770:CDS |
| TATATTCCTGGAGAAGAAGA+TGG | 0.520496 | 4_4:-42449742 | Msa0681770:CDS |
| TGCAATAACTACATCCTTTG+GGG | 0.526090 | 4_4:+42447728 | None:intergenic |
| CCCCTTCCAAGTCAAAACTA+AGG | 0.526801 | 4_4:+42450774 | None:intergenic |
| CTTGTGTTTCGGTTGCTGAA+AGG | 0.526944 | 4_4:-42451752 | Msa0681770:CDS |
| ATGGTGATTTGTCTTTATTG+AGG | 0.527544 | 4_4:+42449897 | None:intergenic |
| ACACGGGTTTGAGCATTACA+AGG | 0.529303 | 4_4:-42448845 | Msa0681770:CDS |
| ATTCCCGGTGGCTTCGTCGT+CGG | 0.533504 | 4_4:+42451972 | None:intergenic |
| TCCAAAGCAATCGCCTTCAT+GGG | 0.534932 | 4_4:+42450665 | None:intergenic |
| TTATGCAAGGAAAACGTCTA+GGG | 0.535922 | 4_4:-42450636 | Msa0681770:CDS |
| TTGCAAGTATGCCCCATTGG+TGG | 0.537673 | 4_4:+42449870 | None:intergenic |
| AGGCTGAAGTATCAGAGAAT+GGG | 0.539656 | 4_4:-42451813 | Msa0681770:CDS |
| ATTATGCAAGGAAAACGTCT+AGG | 0.540819 | 4_4:-42450637 | Msa0681770:CDS |
| CTTTGGACCCTGATTATGCA+AGG | 0.544039 | 4_4:-42450649 | Msa0681770:CDS |
| AACTTGCAAGTATGCCCCAT+TGG | 0.544629 | 4_4:+42449867 | None:intergenic |
| GGCCAATGATGTCGGAGTGA+AGG | 0.545925 | 4_4:-42450380 | Msa0681770:CDS |
| GAAATGGTTTGGCTATCATC+GGG | 0.547830 | 4_4:-42450567 | Msa0681770:CDS |
| CAAGTGAGGAATCAAAAGCT+CGG | 0.548474 | 4_4:+42450294 | None:intergenic |
| GTTTGGCTATCATCGGGACC+AGG | 0.549548 | 4_4:-42450561 | Msa0681770:intron |
| CGAAGATGAAGAAGTTGAAG+AGG | 0.551444 | 4_4:-42451856 | Msa0681770:CDS |
| TTTCAATAAATGTTATTCGC+CGG | 0.552396 | 4_4:+42450338 | None:intergenic |
| ATACCGAAGATCATATTGCT+TGG | 0.552512 | 4_4:-42446568 | Msa0681770:CDS |
| TCGCGCTTGGTACTCAGGCT+GGG | 0.552707 | 4_4:-42451725 | Msa0681770:CDS |
| CCACCGGAGAACGGCGTCGA+CGG | 0.552959 | 4_4:-42451927 | Msa0681770:CDS |
| ATTCTCTGATACTTCAGCCT+CGG | 0.553653 | 4_4:+42451816 | None:intergenic |
| GCCTGCAGCCCACTGACCAC+CGG | 0.554808 | 4_4:+42447776 | None:intergenic |
| TCTAGGGGATTTATTGCTGG+TGG | 0.555512 | 4_4:-42450620 | Msa0681770:CDS |
| ATTGCTTGGCTTCTTCAACA+TGG | 0.558008 | 4_4:-42446554 | Msa0681770:CDS |
| TAGCACAGCTCCTTCACGGC+AGG | 0.564734 | 4_4:-42449704 | Msa0681770:intron |
| GGAATCAAAAGCTCGGGGTG+TGG | 0.565884 | 4_4:+42450301 | None:intergenic |
| AATATAAATACCTGCCGTGA+AGG | 0.569795 | 4_4:+42449694 | None:intergenic |
| GCTGAAAGGATGATCGCGCT+TGG | 0.571163 | 4_4:-42451738 | Msa0681770:CDS |
| TTTATGACACTGCCAATGAC+CGG | 0.572456 | 4_4:-42450357 | Msa0681770:CDS |
| ACCGTCTTAGTTATTGGCTG+GGG | 0.573223 | 4_4:-42449937 | Msa0681770:CDS |
| AAGTCCTGAGATGAAATAGC+TGG | 0.573857 | 4_4:+42449798 | None:intergenic |
| CCGAATGGCACCGATTCCAC+CGG | 0.575052 | 4_4:-42451943 | Msa0681770:exon |
| TAACATTTATTGAAAGACCA+CGG | 0.578922 | 4_4:-42450330 | Msa0681770:CDS |
| AATCACCATAAATCCACCAA+TGG | 0.578949 | 4_4:-42449883 | Msa0681770:CDS |
| GTTCAATACATGCTGTGAAG+TGG | 0.583659 | 4_4:-42450423 | Msa0681770:CDS |
| GCACCGATTCCACCGGAGAA+CGG | 0.584012 | 4_4:-42451936 | Msa0681770:CDS |
| ATTGGAAGCTGTTCTGATGA+CGG | 0.586034 | 4_4:-42450746 | Msa0681770:CDS |
| ATGTAGTTATTGCAAAGCCA+AGG | 0.589123 | 4_4:-42447719 | Msa0681770:intron |
| AAGATGCCACAATATCCACC+TGG | 0.590330 | 4_4:+42449827 | None:intergenic |
| ATGAAATGTTAACCTGAGAA+GGG | 0.590909 | 4_4:+42448796 | None:intergenic |
| AGTTATTGGCTGGGGAACAT+CGG | 0.592499 | 4_4:-42449929 | Msa0681770:CDS |
| GTTGCTTGGGCCAATGATGT+CGG | 0.597738 | 4_4:-42450388 | Msa0681770:CDS |
| TGAACGAGAAGAAGACGAAG+AGG | 0.598383 | 4_4:-42451898 | Msa0681770:CDS |
| AATGTAGGTAGCAGTTATGC+CGG | 0.599291 | 4_4:-42447795 | Msa0681770:intron |
| TAATGAAATTTGAGTACCAT+CGG | 0.600480 | 4_4:-42450688 | Msa0681770:CDS |
| TGAGTACCATCGGCCCATGA+AGG | 0.601223 | 4_4:-42450678 | Msa0681770:CDS |
| CAATCGCCTTCATGGGCCGA+TGG | 0.602113 | 4_4:+42450672 | None:intergenic |
| TTTCCGACGACGAAGCCACC+GGG | 0.606483 | 4_4:-42451975 | Msa0681770:five_prime_UTR |
| CTGAAGTATCAGAGAATGGG+AGG | 0.606526 | 4_4:-42451810 | Msa0681770:CDS |
| TCCTGTGCTTGGTATGACCC+AGG | 0.621509 | 4_4:-42449845 | Msa0681770:CDS |
| ACCTGGGTCATACCAAGCAC+AGG | 0.625818 | 4_4:+42449844 | None:intergenic |
| TATGACCCAGGTGGATATTG+TGG | 0.625838 | 4_4:-42449833 | Msa0681770:CDS |
| GCTGTGGTTGAATCTAGTCA+GGG | 0.636392 | 4_4:-42446512 | Msa0681770:CDS |
| ATACTATATTGTATCCCCAA+AGG | 0.637494 | 4_4:-42447742 | Msa0681770:CDS |
| ACCGGGAATAACAATCCGAA+TGG | 0.640233 | 4_4:-42451958 | Msa0681770:exon |
| AACCAAAGAATCACCAAATG+GGG | 0.640399 | 4_4:+42449774 | None:intergenic |
| CTAACCTGCCAAACCAAGTG+AGG | 0.643597 | 4_4:+42450280 | None:intergenic |
| ATTCGGATTGTTATTCCCGG+TGG | 0.648371 | 4_4:+42451960 | None:intergenic |
| ACAGATGCTCTACCAGTACA+CGG | 0.652130 | 4_4:-42448862 | Msa0681770:CDS |
| ACGCAGTGAACTACTTGATG+AGG | 0.657255 | 4_4:-42446489 | Msa0681770:CDS |
| TCCCCAGCCAATAACTAAGA+CGG | 0.660714 | 4_4:+42449936 | None:intergenic |
| AAGCTGTTCTGATGACGGAA+CGG | 0.674295 | 4_4:-42450741 | Msa0681770:CDS |
| TATGCAAGGAAAACGTCTAG+GGG | 0.676916 | 4_4:-42450635 | Msa0681770:CDS |
| AGCAACCGAAACACAAGACG+CGG | 0.677147 | 4_4:+42451758 | None:intergenic |
| CAGATGCTCTACCAGTACAC+GGG | 0.681796 | 4_4:-42448861 | Msa0681770:CDS |
| ACGATGATGAAGAAGAGCCG+AGG | 0.686392 | 4_4:-42451833 | Msa0681770:CDS |
| AGATGCCACAATATCCACCT+GGG | 0.690116 | 4_4:+42449828 | None:intergenic |
| GTAGGTAGCAGTTATGCCGG+TGG | 0.696913 | 4_4:-42447792 | Msa0681770:intron |
| AGTGAGGAATCAAAAGCTCG+GGG | 0.697347 | 4_4:+42450296 | None:intergenic |
| TCGGGGTGTGGACATCCCCG+TGG | 0.703281 | 4_4:+42450313 | None:intergenic |
| TGTGCTTGGTATGACCCAGG+TGG | 0.709344 | 4_4:-42449842 | Msa0681770:CDS |
| GCATCAGTAGCTAACAACGA+AGG | 0.733912 | 4_4:+42451780 | None:intergenic |
| TCACCATAAATCCACCAATG+GGG | 0.740926 | 4_4:-42449881 | Msa0681770:CDS |
| ACATTTATTGAAAGACCACG+GGG | 0.789376 | 4_4:-42450328 | Msa0681770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAGTAAAAATTATATG+TGG | + | chr4_4:42449019-42449038 | None:intergenic | 10.0% |
| !! | ATAATGTTTAATGTAATAAT+AGG | + | chr4_4:42450248-42450267 | None:intergenic | 10.0% |
| !! | TATCATAGAATTATAATAAA+TGG | - | chr4_4:42451263-42451282 | Msa0681770:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr4_4:42451005-42451024 | Msa0681770:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr4_4:42451005-42451024 | Msa0681770:intron | 100.0% |
| !! | AAAAAAAAAACAAAAAAACG+TGG | - | chr4_4:42446454-42446473 | Msa0681770:CDS | 15.0% |
| !! | AAAAAAAAACAAAAAAACGT+GGG | - | chr4_4:42446455-42446474 | Msa0681770:CDS | 15.0% |
| !!! | TTGTAGTATTTTGATTAAAT+TGG | - | chr4_4:42446916-42446935 | Msa0681770:intron | 15.0% |
| !! | TATATTTAAATTCGAAGAAA+TGG | - | chr4_4:42447942-42447961 | Msa0681770:intron | 15.0% |
| !! | TGTTCACTTAAATTATATAA+AGG | - | chr4_4:42449128-42449147 | Msa0681770:intron | 15.0% |
| !! | TAACATATCTAATAATGTAA+TGG | + | chr4_4:42449367-42449386 | None:intergenic | 15.0% |
| !!! | TATTATGTATTGATAGAAAT+TGG | - | chr4_4:42449762-42449781 | Msa0681770:CDS | 15.0% |
| !!! | TTTGTTATTGTTCTTTTAAT+TGG | - | chr4_4:42450411-42450430 | Msa0681770:CDS | 15.0% |
| !! | AAAATGCAAAAAAATACAAA+AGG | + | chr4_4:42450851-42450870 | None:intergenic | 15.0% |
| !! | CAAAAATTGATTATTCATTA+AGG | + | chr4_4:42450911-42450930 | None:intergenic | 15.0% |
| !! | AATTTGTATGATTATTATGT+TGG | - | chr4_4:42452097-42452116 | Msa0681770:five_prime_UTR | 15.0% |
| !! | ATTTGTATGATTATTATGTT+GGG | - | chr4_4:42452098-42452117 | Msa0681770:five_prime_UTR | 15.0% |
| !!! | ATTCATATTCTTGATTTTCT+CGG | - | chr4_4:42446826-42446845 | Msa0681770:intron | 20.0% |
| !!! | ACTCAATTTTAGTTTATGTT+TGG | + | chr4_4:42447232-42447251 | None:intergenic | 20.0% |
| !! | TAACATGTATTTATTAGTGA+TGG | - | chr4_4:42447427-42447446 | Msa0681770:intron | 20.0% |
| !! | TTATAATAACTTAACAAACC+TGG | + | chr4_4:42447985-42448004 | None:intergenic | 20.0% |
| !!! | TCTATTAATTTTTTGTCTGA+AGG | - | chr4_4:42449225-42449244 | Msa0681770:intron | 20.0% |
| !! | ACTCAAAAATAACTAATTTC+TGG | + | chr4_4:42449328-42449347 | None:intergenic | 20.0% |
| !! | CAAAAAAATACAAAAGGATA+AGG | + | chr4_4:42450845-42450864 | None:intergenic | 20.0% |
| !!! | TCCTTTTGTTTATTTTGTAT+TGG | - | chr4_4:42450936-42450955 | Msa0681770:intron | 20.0% |
| !! | TCCAATACAAAATAAACAAA+AGG | + | chr4_4:42450940-42450959 | None:intergenic | 20.0% |
| !! | TTGTATTGGAATTTAGTATT+TGG | - | chr4_4:42450950-42450969 | Msa0681770:intron | 20.0% |
| !!! | ATAAACAATTAAGTTGTTTG+TGG | + | chr4_4:42451437-42451456 | None:intergenic | 20.0% |
| !!! | GTATTTAACTTTAAGTTTGT+CGG | - | chr4_4:42452058-42452077 | Msa0681770:five_prime_UTR | 20.0% |
| ! | CAATACTTGAAAAACAAAGA+AGG | - | chr4_4:42446426-42446445 | Msa0681770:CDS | 25.0% |
| ! | TTTGTTTAACGGTGAAAAAA+GGG | + | chr4_4:42446528-42446547 | None:intergenic | 25.0% |
| !! | TTCATATTCTTGATTTTCTC+GGG | - | chr4_4:42446827-42446846 | Msa0681770:intron | 25.0% |
| ! | AAGGTAAAGTTATTTGTGTT+TGG | + | chr4_4:42447155-42447174 | None:intergenic | 25.0% |
| ! | TAATGAAATTTGAGTACCAT+CGG | - | chr4_4:42447837-42447856 | Msa0681770:intron | 25.0% |
| ! | TTAAATTCGAAGAAATGGTT+TGG | - | chr4_4:42447947-42447966 | Msa0681770:intron | 25.0% |
| ! | TTTCAATAAATGTTATTCGC+CGG | + | chr4_4:42448190-42448209 | None:intergenic | 25.0% |
| ! | TAACATTTATTGAAAGACCA+CGG | - | chr4_4:42448195-42448214 | Msa0681770:intron | 25.0% |
| ! | TATTTATATTCCTCGCATAT+TGG | - | chr4_4:42448844-42448863 | Msa0681770:CDS | 25.0% |
| !! | TATAATTTTACCAATATGCG+AGG | + | chr4_4:42448857-42448876 | None:intergenic | 25.0% |
| ! | CATGAACTTTATTCATAACT+TGG | + | chr4_4:42448944-42448963 | None:intergenic | 25.0% |
| ! | TAGACTATTCTAAACCTAAT+CGG | - | chr4_4:42448980-42448999 | Msa0681770:intron | 25.0% |
| ! | TTGTAGCTATAATATAGGAA+GGG | + | chr4_4:42449083-42449102 | None:intergenic | 25.0% |
| ! | ACTACTTGTAGCTATAATAT+AGG | + | chr4_4:42449088-42449107 | None:intergenic | 25.0% |
| !! | TAAGCAAAAAAGTGTAAGTA+TGG | - | chr4_4:42449431-42449450 | Msa0681770:intron | 25.0% |
| ! | TCTGCCAAAAATAAAATGTA+TGG | - | chr4_4:42449476-42449495 | Msa0681770:intron | 25.0% |
| !!! | CACACCATACATTTTATTTT+TGG | + | chr4_4:42449483-42449502 | None:intergenic | 25.0% |
| ! | AATGTATGGTGTGTTATATA+AGG | - | chr4_4:42449490-42449509 | Msa0681770:intron | 25.0% |
| ! | TTGATATGCAAATTTGAACA+GGG | - | chr4_4:42449585-42449604 | Msa0681770:intron | 25.0% |
| ! | AAATAACTGAAAGAGGAAAT+AGG | - | chr4_4:42449895-42449914 | Msa0681770:CDS | 25.0% |
| ! | TGATCTGTATGGATATAAAA+GGG | + | chr4_4:42449999-42450018 | None:intergenic | 25.0% |
| ! | TTGATCTGTATGGATATAAA+AGG | + | chr4_4:42450000-42450019 | None:intergenic | 25.0% |
| ! | TATTTAACAACACTACAATG+AGG | + | chr4_4:42450051-42450070 | None:intergenic | 25.0% |
| !! | ATTGGAAATTCTTTGAAAAC+AGG | - | chr4_4:42450429-42450448 | Msa0681770:CDS | 25.0% |
| ! | AAACAGGAAATATAGTTAAC+AGG | - | chr4_4:42450445-42450464 | Msa0681770:CDS | 25.0% |
| ! | AACAGGAAATATAGTTAACA+GGG | - | chr4_4:42450446-42450465 | Msa0681770:intron | 25.0% |
| ! | CTATTATTATGGTGTACATT+AGG | + | chr4_4:42450645-42450664 | None:intergenic | 25.0% |
| ! | CTAATGTACACCATAATAAT+AGG | - | chr4_4:42450643-42450662 | Msa0681770:CDS | 25.0% |
| !!! | GTTGTTTTTCATTCAAATGT+AGG | - | chr4_4:42450715-42450734 | Msa0681770:CDS | 25.0% |
| !!! | CATTTTATTTATGCATGAGA+GGG | - | chr4_4:42450865-42450884 | Msa0681770:intron | 25.0% |
| ! | TAAATCAGTGATTGTATGTT+TGG | - | chr4_4:42450984-42451003 | Msa0681770:intron | 25.0% |
| ! | AAATCAGTGATTGTATGTTT+GGG | - | chr4_4:42450985-42451004 | Msa0681770:intron | 25.0% |
| ! | AACATTTGTAATAGAAAGTC+TGG | - | chr4_4:42451363-42451382 | Msa0681770:intron | 25.0% |
| ! | CTATTATGCAATAAAGAGTA+TGG | - | chr4_4:42451548-42451567 | Msa0681770:intron | 25.0% |
| ! | TTATATGGTAACTGAAGAAT+GGG | - | chr4_4:42451576-42451595 | Msa0681770:intron | 25.0% |
| ! | ATGAAAGATAAAGTGTAGAA+AGG | + | chr4_4:42451734-42451753 | None:intergenic | 25.0% |
| ! | TAAACACATTATCCATAGAT+CGG | - | chr4_4:42451792-42451811 | Msa0681770:CDS | 25.0% |
| !! | TTGATGCATATTGATAATCA+GGG | - | chr4_4:42451934-42451953 | Msa0681770:CDS | 25.0% |
| AAAAAAGGGAAATTGTGTTG+AGG | + | chr4_4:42446514-42446533 | None:intergenic | 30.0% | |
| GTTTGTTTAACGGTGAAAAA+AGG | + | chr4_4:42446529-42446548 | None:intergenic | 30.0% | |
| ! | TGAATTGATTCTTACGTGTA+TGG | - | chr4_4:42447045-42447064 | Msa0681770:intron | 30.0% |
| ! | TCTGACTAAAAATGAGTTGA+AGG | + | chr4_4:42447174-42447193 | None:intergenic | 30.0% |
| TTCAAACTTCAGGTAGAAAT+TGG | + | chr4_4:42447282-42447301 | None:intergenic | 30.0% | |
| ! | CAGAAATTGATTCAAACTTC+AGG | + | chr4_4:42447292-42447311 | None:intergenic | 30.0% |
| CTGAAGTTTGAATCAATTTC+TGG | - | chr4_4:42447290-42447309 | Msa0681770:intron | 30.0% | |
| ! | AAGTTTGAATCAATTTCTGG+AGG | - | chr4_4:42447293-42447312 | Msa0681770:intron | 30.0% |
| TTCACTTAACTATGCATGTT+TGG | + | chr4_4:42447406-42447425 | None:intergenic | 30.0% | |
| GCTCAATCTCAATAATGATT+TGG | + | chr4_4:42447485-42447504 | None:intergenic | 30.0% | |
| AATCATTATTGAGATTGAGC+TGG | - | chr4_4:42447485-42447504 | Msa0681770:intron | 30.0% | |
| ! | AAACAGTCTTTTTACTGATG+AGG | - | chr4_4:42447814-42447833 | Msa0681770:intron | 30.0% |
| !! | TATGTTCTGGATGGTATTTT+TGG | - | chr4_4:42448019-42448038 | Msa0681770:intron | 30.0% |
| !!! | AGAGTGCAAAACCTTTTTTT+GGG | + | chr4_4:42448075-42448094 | None:intergenic | 30.0% |
| AACATTTATTGAAAGACCAC+GGG | - | chr4_4:42448196-42448215 | Msa0681770:intron | 30.0% | |
| CAAACAGCAAATAACTAAGA+CGG | + | chr4_4:42448434-42448453 | None:intergenic | 30.0% | |
| ! | ATGGTGATTTGTCTTTATTG+AGG | + | chr4_4:42448631-42448650 | None:intergenic | 30.0% |
| TTCTACACTTGCATTATAAC+AGG | + | chr4_4:42448903-42448922 | None:intergenic | 30.0% | |
| TGTAGCTATAATATAGGAAG+GGG | + | chr4_4:42449082-42449101 | None:intergenic | 30.0% | |
| CTTGTAGCTATAATATAGGA+AGG | + | chr4_4:42449084-42449103 | None:intergenic | 30.0% | |
| ATAGCTACAAGTAGTTATCT+CGG | - | chr4_4:42449093-42449112 | Msa0681770:intron | 30.0% | |
| !!! | TCCGGGCATTTTAATTTAAA+GGG | - | chr4_4:42449158-42449177 | Msa0681770:intron | 30.0% |
| AATTTAAAGGGGTAATTTCC+TGG | - | chr4_4:42449170-42449189 | Msa0681770:intron | 30.0% | |
| TATGGTGTGTTATATAAGGA+AGG | - | chr4_4:42449494-42449513 | Msa0681770:intron | 30.0% | |
| AATTCCAGATTTAGTGAAGT+GGG | + | chr4_4:42449548-42449567 | None:intergenic | 30.0% | |
| AAATTCCAGATTTAGTGAAG+TGG | + | chr4_4:42449549-42449568 | None:intergenic | 30.0% | |
| GTTGATATGCAAATTTGAAC+AGG | - | chr4_4:42449584-42449603 | Msa0681770:intron | 30.0% | |
| ATGAAATGTTAACCTGAGAA+GGG | + | chr4_4:42449732-42449751 | None:intergenic | 30.0% | |
| AATGAAATGTTAACCTGAGA+AGG | + | chr4_4:42449733-42449752 | None:intergenic | 30.0% | |
| GATCAAAACTTACTCAGTTA+TGG | - | chr4_4:42449784-42449803 | Msa0681770:CDS | 30.0% | |
| TACACAGAAGAATAACACAA+TGG | + | chr4_4:42449815-42449834 | None:intergenic | 30.0% | |
| GGAAAACAAATAACTGAAAG+AGG | - | chr4_4:42449888-42449907 | Msa0681770:CDS | 30.0% | |
| GAAAGAGGAAATAGGTAAAA+TGG | - | chr4_4:42449903-42449922 | Msa0681770:CDS | 30.0% | |
| AAATATCAGCTATAACGTAG+CGG | - | chr4_4:42450066-42450085 | Msa0681770:intron | 30.0% | |
| TACATTAAACATTATGTCCC+TGG | - | chr4_4:42450253-42450272 | Msa0681770:intron | 30.0% | |
| ACATTAAACATTATGTCCCT+GGG | - | chr4_4:42450254-42450273 | Msa0681770:intron | 30.0% | |
| ACAGGAAATATAGTTAACAG+GGG | - | chr4_4:42450447-42450466 | Msa0681770:intron | 30.0% | |
| AGGGAAATTAAGGATCTATT+TGG | + | chr4_4:42450552-42450571 | None:intergenic | 30.0% | |
| ATGTACACCATAATAATAGG+TGG | - | chr4_4:42450646-42450665 | Msa0681770:CDS | 30.0% | |
| TAGGAAACCACCTATTATTA+TGG | + | chr4_4:42450656-42450675 | None:intergenic | 30.0% | |
| ATACTATATTGTATCCCCAA+AGG | - | chr4_4:42450783-42450802 | Msa0681770:CDS | 30.0% | |
| TTGCAATAACTACATCCTTT+GGG | + | chr4_4:42450801-42450820 | None:intergenic | 30.0% | |
| TTTGCAATAACTACATCCTT+TGG | + | chr4_4:42450802-42450821 | None:intergenic | 30.0% | |
| AAGGAACTTGAAATTAACCT+TGG | + | chr4_4:42450826-42450845 | None:intergenic | 30.0% | |
| !! | GCATTTTATTTATGCATGAG+AGG | - | chr4_4:42450864-42450883 | Msa0681770:intron | 30.0% |
| AATCAGTGATTGTATGTTTG+GGG | - | chr4_4:42450986-42451005 | Msa0681770:intron | 30.0% | |
| AACAAAACATCCATCATGAT+AGG | + | chr4_4:42451092-42451111 | None:intergenic | 30.0% | |
| TATGTGAATAACACATCAAC+TGG | + | chr4_4:42451228-42451247 | None:intergenic | 30.0% | |
| !! | TATATGTTCTAGTTCCTTGA+GGG | + | chr4_4:42451485-42451504 | None:intergenic | 30.0% |
| !! | TTATATGTTCTAGTTCCTTG+AGG | + | chr4_4:42451486-42451505 | None:intergenic | 30.0% |
| ! | AATTGAAGTACTCATGTGAT+AGG | - | chr4_4:42451514-42451533 | Msa0681770:intron | 30.0% |
| TCATGTGATAGGAAGATAAA+GGG | - | chr4_4:42451525-42451544 | Msa0681770:intron | 30.0% | |
| GTTATATGGTAACTGAAGAA+TGG | - | chr4_4:42451575-42451594 | Msa0681770:intron | 30.0% | |
| CTTTAGTAGTATGAATAGTG+AGG | - | chr4_4:42451629-42451648 | Msa0681770:intron | 30.0% | |
| TGGATAATGTGTTTACTAAC+TGG | + | chr4_4:42451787-42451806 | None:intergenic | 30.0% | |
| ! | GTTGATGCATATTGATAATC+AGG | - | chr4_4:42451933-42451952 | Msa0681770:CDS | 30.0% |
| ! | CGTCGGAAAAGTTTGTTTAA+CGG | + | chr4_4:42446539-42446558 | None:intergenic | 35.0% |
| AGCTTCAAGTAGAATCGTTT+CGG | + | chr4_4:42447100-42447119 | None:intergenic | 35.0% | |
| ! | AGAGGCAAAATTGATTCTAG+AGG | + | chr4_4:42447370-42447389 | None:intergenic | 35.0% |
| ! | AATTTTGCCTCTTCCATAAG+TGG | - | chr4_4:42447378-42447397 | Msa0681770:intron | 35.0% |
| TGTTAATTGACATTCTCTCC+TGG | - | chr4_4:42447516-42447535 | Msa0681770:intron | 35.0% | |
| !! | ACGAACGAAATTGTTTCTGA+CGG | - | chr4_4:42447675-42447694 | Msa0681770:intron | 35.0% |
| !! | CTGACGGGTAATTTTATTAC+AGG | - | chr4_4:42447691-42447710 | Msa0681770:intron | 35.0% |
| !!! | GAATGACCTTAGTTTTGACT+TGG | - | chr4_4:42447745-42447764 | Msa0681770:CDS | 35.0% |
| !!! | ACCTTAGTTTTGACTTGGAA+GGG | - | chr4_4:42447750-42447769 | Msa0681770:CDS | 35.0% |
| ! | ACGTTTTCCTTGCATAATCA+GGG | + | chr4_4:42447886-42447905 | None:intergenic | 35.0% |
| ATTATGCAAGGAAAACGTCT+AGG | - | chr4_4:42447888-42447907 | Msa0681770:intron | 35.0% | |
| TTATGCAAGGAAAACGTCTA+GGG | - | chr4_4:42447889-42447908 | Msa0681770:intron | 35.0% | |
| ! | AGAAATGGTTTGGCTATCAT+CGG | - | chr4_4:42447957-42447976 | Msa0681770:intron | 35.0% |
| !!! | GCAAAACCTTTTTTTGGGAA+GGG | + | chr4_4:42448070-42448089 | None:intergenic | 35.0% |
| !!! | TGCAAAACCTTTTTTTGGGA+AGG | + | chr4_4:42448071-42448090 | None:intergenic | 35.0% |
| !!! | CAGAGTGCAAAACCTTTTTT+TGG | + | chr4_4:42448076-42448095 | None:intergenic | 35.0% |
| ! | CAAAAAAAGGTTTTGCACTC+TGG | - | chr4_4:42448074-42448093 | Msa0681770:intron | 35.0% |
| ACATTTATTGAAAGACCACG+GGG | - | chr4_4:42448197-42448216 | Msa0681770:intron | 35.0% | |
| !! | TTTTGATTCCTCACTTGGTT+TGG | - | chr4_4:42448237-42448256 | Msa0681770:intron | 35.0% |
| !! | TCACTTTGAAGTTTGAACAG+CGG | - | chr4_4:42448325-42448344 | Msa0681770:intron | 35.0% |
| TCAGCAGTTTCATCAAGAAA+TGG | + | chr4_4:42448377-42448396 | None:intergenic | 35.0% | |
| ATCTTCCACCATCACTTAAT+AGG | - | chr4_4:42448402-42448421 | Msa0681770:intron | 35.0% | |
| !! | TCACTTTGAAGTTTGAACAG+CGG | - | chr4_4:42448325-42448344 | Msa0681770:intron | 35.0% |
| ATCTTCCACCATCACTTAAT+AGG | - | chr4_4:42448402-42448421 | Msa0681770:intron | 35.0% | |
| AATCACCATAAATCCACCAA+TGG | - | chr4_4:42448642-42448661 | Msa0681770:intron | 35.0% | |
| ATCACCATAAATCCACCAAT+GGG | - | chr4_4:42448643-42448662 | Msa0681770:intron | 35.0% | |
| AACCAAAGAATCACCAAATG+GGG | + | chr4_4:42448754-42448773 | None:intergenic | 35.0% | |
| CAACCAAAGAATCACCAAAT+GGG | + | chr4_4:42448755-42448774 | None:intergenic | 35.0% | |
| ACAACCAAAGAATCACCAAA+TGG | + | chr4_4:42448756-42448775 | None:intergenic | 35.0% | |
| GTTGTTCTTGCTTATATTCC+TGG | - | chr4_4:42448771-42448790 | Msa0681770:intron | 35.0% | |
| TATATTCCTGGAGAAGAAGA+TGG | - | chr4_4:42448783-42448802 | Msa0681770:intron | 35.0% | |
| AATATAAATACCTGCCGTGA+AGG | + | chr4_4:42448834-42448853 | None:intergenic | 35.0% | |
| CTTGCATTATAACAGGTTCA+AGG | + | chr4_4:42448896-42448915 | None:intergenic | 35.0% | |
| TTATATGTGGCCCATTAATC+AGG | + | chr4_4:42449006-42449025 | None:intergenic | 35.0% | |
| TTATATAAAGGAGCTTCCTC+CGG | - | chr4_4:42449140-42449159 | Msa0681770:intron | 35.0% | |
| CTTTAAATTAAAATGCCCGG+AGG | + | chr4_4:42449159-42449178 | None:intergenic | 35.0% | |
| !!! | CTCCGGGCATTTTAATTTAA+AGG | - | chr4_4:42449157-42449176 | Msa0681770:intron | 35.0% |
| CCCCTTTAAATTAAAATGCC+CGG | + | chr4_4:42449162-42449181 | None:intergenic | 35.0% | |
| !!! | CCGGGCATTTTAATTTAAAG+GGG | - | chr4_4:42449159-42449178 | Msa0681770:intron | 35.0% |
| AATTTCCTGGTCATAGTACT+TGG | - | chr4_4:42449183-42449202 | Msa0681770:intron | 35.0% | |
| TATATCCAAGTACTATGACC+AGG | + | chr4_4:42449191-42449210 | None:intergenic | 35.0% | |
| TCTGAAGGATTCAAACAATG+AGG | - | chr4_4:42449240-42449259 | Msa0681770:intron | 35.0% | |
| GTATGGAAGCAATGAAATTG+TGG | - | chr4_4:42449448-42449467 | Msa0681770:intron | 35.0% | |
| TATATAAGGAAGGAGAAGTG+AGG | - | chr4_4:42449504-42449523 | Msa0681770:intron | 35.0% | |
| CATGATACTACTCTTACTTC+AGG | + | chr4_4:42449624-42449643 | None:intergenic | 35.0% | |
| CTGAAGTAAGAGTAGTATCA+TGG | - | chr4_4:42449622-42449641 | Msa0681770:intron | 35.0% | |
| TGTGTATACTGATATCAGTG+TGG | - | chr4_4:42449829-42449848 | Msa0681770:CDS | 35.0% | |
| GTAAATGTGGAGAAGAAAGA+GGG | + | chr4_4:42449953-42449972 | None:intergenic | 35.0% | |
| AGTAAATGTGGAGAAGAAAG+AGG | + | chr4_4:42449954-42449973 | None:intergenic | 35.0% | |
| GATAGATGGGTAAGTAAATG+TGG | + | chr4_4:42449966-42449985 | None:intergenic | 35.0% | |
| GTATGGATATAAAAGGGAGA+TGG | + | chr4_4:42449993-42450012 | None:intergenic | 35.0% | |
| AAGTTGTCAGTCAAAAATCG+CGG | + | chr4_4:42450211-42450230 | None:intergenic | 35.0% | |
| GCATAAGCACAAAATGAGAA+CGG | + | chr4_4:42450314-42450333 | None:intergenic | 35.0% | |
| CAGGAAATATAGTTAACAGG+GGG | - | chr4_4:42450448-42450467 | Msa0681770:intron | 35.0% | |
| GAGGTTCATGTAAGAGATTA+AGG | + | chr4_4:42450586-42450605 | None:intergenic | 35.0% | |
| GGGGATACAATATAGTATAG+TGG | + | chr4_4:42450781-42450800 | None:intergenic | 35.0% | |
| TGCAATAACTACATCCTTTG+GGG | + | chr4_4:42450800-42450819 | None:intergenic | 35.0% | |
| ATGTAGTTATTGCAAAGCCA+AGG | - | chr4_4:42450806-42450825 | Msa0681770:CDS | 35.0% | |
| ATCAGTGATTGTATGTTTGG+GGG | - | chr4_4:42450987-42451006 | Msa0681770:intron | 35.0% | |
| ATCATATCCACCTATCATGA+TGG | - | chr4_4:42451079-42451098 | Msa0681770:intron | 35.0% | |
| AAAACATCCATCATGATAGG+TGG | + | chr4_4:42451089-42451108 | None:intergenic | 35.0% | |
| ! | TCAACAATTTTCCAATGCAG+TGG | - | chr4_4:42451170-42451189 | Msa0681770:intron | 35.0% |
| CTCATGTGATAGGAAGATAA+AGG | - | chr4_4:42451524-42451543 | Msa0681770:intron | 35.0% | |
| ! | ATGCAATAAAGAGTATGGTG+AGG | - | chr4_4:42451553-42451572 | Msa0681770:intron | 35.0% |
| ! | AAGAGTATGGTGAGGTTATA+TGG | - | chr4_4:42451561-42451580 | Msa0681770:intron | 35.0% |
| TAGTAGTATGAATAGTGAGG+TGG | - | chr4_4:42451632-42451651 | Msa0681770:intron | 35.0% | |
| AGTAGTATGAATAGTGAGGT+GGG | - | chr4_4:42451633-42451652 | Msa0681770:intron | 35.0% | |
| !! | AAGAGTGTTCTCTTTCTTTG+AGG | - | chr4_4:42451677-42451696 | Msa0681770:intron | 35.0% |
| CTAACTGGAAATTGAGCAAA+AGG | + | chr4_4:42451772-42451791 | None:intergenic | 35.0% | |
| TATCCATAGATCGGTATTTC+CGG | - | chr4_4:42451801-42451820 | Msa0681770:CDS | 35.0% | |
| TAAGCTGAAGAACATACTGA+TGG | + | chr4_4:42451830-42451849 | None:intergenic | 35.0% | |
| ATACCGAAGATCATATTGCT+TGG | - | chr4_4:42451957-42451976 | Msa0681770:exon | 35.0% | |
| AAGCCAAGCAATATGATCTT+CGG | + | chr4_4:42451963-42451982 | None:intergenic | 35.0% | |
| CGAAGATGAAGAAGTTGAAG+AGG | - | chr4_4:42446669-42446688 | Msa0681770:intron | 40.0% | |
| ATTCTCTGATACTTCAGCCT+CGG | + | chr4_4:42446712-42446731 | None:intergenic | 40.0% | |
| ! | AGGCTGAAGTATCAGAGAAT+GGG | - | chr4_4:42446712-42446731 | Msa0681770:intron | 40.0% |
| ! | TCTTGATTTTCTCGGGAATC+AGG | - | chr4_4:42446834-42446853 | Msa0681770:intron | 40.0% |
| GCTTCAAGTAGAATCGTTTC+GGG | + | chr4_4:42447099-42447118 | None:intergenic | 40.0% | |
| GGTTCTGCTGTGATAAGAAT+TGG | + | chr4_4:42447211-42447230 | None:intergenic | 40.0% | |
| ! | TTTGGTTCCACTTATGGAAG+AGG | + | chr4_4:42447388-42447407 | None:intergenic | 40.0% |
| ! | TGCATGTTTGGTTCCACTTA+TGG | + | chr4_4:42447394-42447413 | None:intergenic | 40.0% |
| ATTCTCTCCTGGCTAATGTA+TGG | - | chr4_4:42447527-42447546 | Msa0681770:intron | 40.0% | |
| TCTCATTCCATACATTAGCC+AGG | + | chr4_4:42447537-42447556 | None:intergenic | 40.0% | |
| CTAATGTATGGAATGAGAGC+TGG | - | chr4_4:42447539-42447558 | Msa0681770:intron | 40.0% | |
| AGATTGTAGCTGTTGTCATG+TGG | - | chr4_4:42447619-42447638 | Msa0681770:intron | 40.0% | |
| !! | CGAACGAAATTGTTTCTGAC+GGG | - | chr4_4:42447676-42447695 | Msa0681770:intron | 40.0% |
| !!! | GACCTTAGTTTTGACTTGGA+AGG | - | chr4_4:42447749-42447768 | Msa0681770:CDS | 40.0% |
| !!! | CCTTAGTTTTGACTTGGAAG+GGG | - | chr4_4:42447751-42447770 | Msa0681770:CDS | 40.0% |
| GACTTGGAAGGGGAATATAT+TGG | - | chr4_4:42447761-42447780 | Msa0681770:CDS | 40.0% | |
| ATTGGAAGCTGTTCTGATGA+CGG | - | chr4_4:42447779-42447798 | Msa0681770:CDS | 40.0% | |
| ! | GACGTTTTCCTTGCATAATC+AGG | + | chr4_4:42447887-42447906 | None:intergenic | 40.0% |
| TATGCAAGGAAAACGTCTAG+GGG | - | chr4_4:42447890-42447909 | Msa0681770:intron | 40.0% | |
| TTTATTGCTGGTGGTTTAGC+TGG | - | chr4_4:42447914-42447933 | Msa0681770:intron | 40.0% | |
| ! | GAAATGGTTTGGCTATCATC+GGG | - | chr4_4:42447958-42447977 | Msa0681770:intron | 40.0% |
| TCTTAGCAGCACATATGTTC+TGG | - | chr4_4:42448006-42448025 | Msa0681770:intron | 40.0% | |
| !!! | CTTTTTTTGGGAAGGGAACA+GGG | + | chr4_4:42448063-42448082 | None:intergenic | 40.0% |
| GTTCAATACATGCTGTGAAG+TGG | - | chr4_4:42448102-42448121 | Msa0681770:intron | 40.0% | |
| TTTATGACACTGCCAATGAC+CGG | - | chr4_4:42448168-42448187 | Msa0681770:intron | 40.0% | |
| AAATGTTATTCGCCGGTCAT+TGG | + | chr4_4:42448183-42448202 | None:intergenic | 40.0% | |
| AAGTGAGGAATCAAAAGCTC+GGG | + | chr4_4:42448233-42448252 | None:intergenic | 40.0% | |
| CAAGTGAGGAATCAAAAGCT+CGG | + | chr4_4:42448234-42448253 | None:intergenic | 40.0% | |
| GTCATCCTATTAAGTGATGG+TGG | + | chr4_4:42448410-42448429 | None:intergenic | 40.0% | |
| ! | GGTGTCATCCTATTAAGTGA+TGG | + | chr4_4:42448413-42448432 | None:intergenic | 40.0% |
| TGGTGGAAGATTAAGTTCAG+CGG | + | chr4_4:42448393-42448412 | None:intergenic | 40.0% | |
| GTCATCCTATTAAGTGATGG+TGG | + | chr4_4:42448410-42448429 | None:intergenic | 40.0% | |
| ! | GGTGTCATCCTATTAAGTGA+TGG | + | chr4_4:42448413-42448432 | None:intergenic | 40.0% |
| GATGACACCGTCTTAGTTAT+TGG | - | chr4_4:42448424-42448443 | Msa0681770:intron | 40.0% | |
| TCACCATAAATCCACCAATG+GGG | - | chr4_4:42448644-42448663 | Msa0681770:intron | 40.0% | |
| ! | CAAACCAGCTATTTCATCTC+AGG | - | chr4_4:42448723-42448742 | Msa0681770:intron | 40.0% |
| AAGTCCTGAGATGAAATAGC+TGG | + | chr4_4:42448730-42448749 | None:intergenic | 40.0% | |
| TTATCTCCATCTTCTTCTCC+AGG | + | chr4_4:42448792-42448811 | None:intergenic | 40.0% | |
| TGGAGAAGAAGATGGAGATA+AGG | - | chr4_4:42448791-42448810 | Msa0681770:intron | 40.0% | |
| AACCTAATCGGCCTGATTAA+TGG | - | chr4_4:42448992-42449011 | Msa0681770:intron | 40.0% | |
| ACCTAATCGGCCTGATTAAT+GGG | - | chr4_4:42448993-42449012 | Msa0681770:intron | 40.0% | |
| GCTATAATATAGGAAGGGGA+GGG | + | chr4_4:42449078-42449097 | None:intergenic | 40.0% | |
| AGCTATAATATAGGAAGGGG+AGG | + | chr4_4:42449079-42449098 | None:intergenic | 40.0% | |
| TATATAAAGGAGCTTCCTCC+GGG | - | chr4_4:42449141-42449160 | Msa0681770:intron | 40.0% | |
| GAAGGATTCAAACAATGAGG+TGG | - | chr4_4:42449243-42449262 | Msa0681770:intron | 40.0% | |
| AAACAATGAGGTGGCTCAAT+TGG | - | chr4_4:42449252-42449271 | Msa0681770:intron | 40.0% | |
| ACTACAATGAGGTCATCGAA+GGG | + | chr4_4:42450040-42450059 | None:intergenic | 40.0% | |
| GCTATAGTGCTGTACAATAG+CGG | - | chr4_4:42450163-42450182 | Msa0681770:intron | 40.0% | |
| TCAAAAATCGCGGAAATCAG+TGG | + | chr4_4:42450201-42450220 | None:intergenic | 40.0% | |
| ATACAGTTCCTAAGTTCCCA+GGG | + | chr4_4:42450273-42450292 | None:intergenic | 40.0% | |
| !!! | ACAGGGGGTGCTATTTTTTT+TGG | - | chr4_4:42450463-42450482 | Msa0681770:intron | 40.0% |
| !!! | CAGGGGGTGCTATTTTTTTT+GGG | - | chr4_4:42450464-42450483 | Msa0681770:intron | 40.0% |
| GACACACTCAAGGGAAATTA+AGG | + | chr4_4:42450562-42450581 | None:intergenic | 40.0% | |
| GATTAAGGAGACACACTCAA+GGG | + | chr4_4:42450571-42450590 | None:intergenic | 40.0% | |
| AGATTAAGGAGACACACTCA+AGG | + | chr4_4:42450572-42450591 | None:intergenic | 40.0% | |
| TCTTACATGAACCTCTGTCT+TGG | - | chr4_4:42450591-42450610 | Msa0681770:CDS | 40.0% | |
| CTTACATGAACCTCTGTCTT+GGG | - | chr4_4:42450592-42450611 | Msa0681770:CDS | 40.0% | |
| CATACACAAAACATGCACGT+AGG | + | chr4_4:42450675-42450694 | None:intergenic | 40.0% | |
| ! | CTACGTGCATGTTTTGTGTA+TGG | - | chr4_4:42450673-42450692 | Msa0681770:CDS | 40.0% |
| AATGTAGGTAGCAGTTATGC+CGG | - | chr4_4:42450730-42450749 | Msa0681770:CDS | 40.0% | |
| TCAGTGATTGTATGTTTGGG+GGG | - | chr4_4:42450988-42451007 | Msa0681770:intron | 40.0% | |
| TGTCAGCTGAATGATATGCA+TGG | - | chr4_4:42451142-42451161 | Msa0681770:intron | 40.0% | |
| ATCCATAGATCGGTATTTCC+GGG | - | chr4_4:42451802-42451821 | Msa0681770:CDS | 40.0% | |
| AAGAACATACTGATGGAACC+CGG | + | chr4_4:42451823-42451842 | None:intergenic | 40.0% | |
| ATTGCTTGGCTTCTTCAACA+TGG | - | chr4_4:42451971-42451990 | Msa0681770:five_prime_UTR | 40.0% | |
| ! | GCATGAAAAAGCTTTAGCTG+TGG | - | chr4_4:42451997-42452016 | Msa0681770:five_prime_UTR | 40.0% |
| TAGATCTGTTTCGTTGCGCT+GGG | + | chr4_4:42446489-42446508 | None:intergenic | 45.0% | |
| ! | ATTCGGATTGTTATTCCCGG+TGG | + | chr4_4:42446568-42446587 | None:intergenic | 45.0% |
| ACCGGGAATAACAATCCGAA+TGG | - | chr4_4:42446567-42446586 | Msa0681770:CDS | 45.0% | |
| ! | GCCATTCGGATTGTTATTCC+CGG | + | chr4_4:42446571-42446590 | None:intergenic | 45.0% |
| TGAACGAGAAGAAGACGAAG+AGG | - | chr4_4:42446627-42446646 | Msa0681770:intron | 45.0% | |
| AGACGAAGAGGAAGATGAAG+AGG | - | chr4_4:42446639-42446658 | Msa0681770:intron | 45.0% | |
| ! | GAGGCTGAAGTATCAGAGAA+TGG | - | chr4_4:42446711-42446730 | Msa0681770:intron | 45.0% |
| ! | CTGAAGTATCAGAGAATGGG+AGG | - | chr4_4:42446715-42446734 | Msa0681770:intron | 45.0% |
| GCATCAGTAGCTAACAACGA+AGG | + | chr4_4:42446748-42446767 | None:intergenic | 45.0% | |
| CTTGTGTTTCGGTTGCTGAA+AGG | - | chr4_4:42446773-42446792 | Msa0681770:intron | 45.0% | |
| TCAAGTAGAATCGTTTCGGG+AGG | + | chr4_4:42447096-42447115 | None:intergenic | 45.0% | |
| CCCCTTCCAAGTCAAAACTA+AGG | + | chr4_4:42447754-42447773 | None:intergenic | 45.0% | |
| !! | AAGCTGTTCTGATGACGGAA+CGG | - | chr4_4:42447784-42447803 | Msa0681770:CDS | 45.0% |
| TCCAAAGCAATCGCCTTCAT+GGG | + | chr4_4:42447863-42447882 | None:intergenic | 45.0% | |
| CTTTGGACCCTGATTATGCA+AGG | - | chr4_4:42447876-42447895 | Msa0681770:intron | 45.0% | |
| ACGTCTAGGGGATTTATTGC+TGG | - | chr4_4:42447902-42447921 | Msa0681770:intron | 45.0% | |
| TCTAGGGGATTTATTGCTGG+TGG | - | chr4_4:42447905-42447924 | Msa0681770:intron | 45.0% | |
| ! | AGCAGCACATATGTTCTGGA+TGG | - | chr4_4:42448010-42448029 | Msa0681770:intron | 45.0% |
| !!! | CCTTTTTTTGGGAAGGGAAC+AGG | + | chr4_4:42448064-42448083 | None:intergenic | 45.0% |
| CCTGTTCCCTTCCCAAAAAA+AGG | - | chr4_4:42448061-42448080 | Msa0681770:intron | 45.0% | |
| ! | AAGGTTTTGCACTCTGGTGA+AGG | - | chr4_4:42448080-42448099 | Msa0681770:intron | 45.0% |
| !! | GAGAGCAAGTCTTGTTGCTT+GGG | - | chr4_4:42448124-42448143 | Msa0681770:intron | 45.0% |
| AACCTTCACTCCGACATCAT+TGG | + | chr4_4:42448150-42448169 | None:intergenic | 45.0% | |
| AGTGAGGAATCAAAAGCTCG+GGG | + | chr4_4:42448232-42448251 | None:intergenic | 45.0% | |
| !! | CGAGCTTTTGATTCCTCACT+TGG | - | chr4_4:42448232-42448251 | Msa0681770:intron | 45.0% |
| ACACCGTCTTAGTTATTGGC+TGG | - | chr4_4:42448586-42448605 | Msa0681770:intron | 45.0% | |
| ! | CACCGTCTTAGTTATTGGCT+GGG | - | chr4_4:42448587-42448606 | Msa0681770:intron | 45.0% |
| ! | ACCGTCTTAGTTATTGGCTG+GGG | - | chr4_4:42448588-42448607 | Msa0681770:intron | 45.0% |
| TCCCCAGCCAATAACTAAGA+CGG | + | chr4_4:42448592-42448611 | None:intergenic | 45.0% | |
| ! | AGTTATTGGCTGGGGAACAT+CGG | - | chr4_4:42448596-42448615 | Msa0681770:intron | 45.0% |
| !! | ATGCCCCATTGGTGGATTTA+TGG | + | chr4_4:42448650-42448669 | None:intergenic | 45.0% |
| AACTTGCAAGTATGCCCCAT+TGG | + | chr4_4:42448661-42448680 | None:intergenic | 45.0% | |
| TACTTGCAAGTTCCTGTGCT+TGG | - | chr4_4:42448669-42448688 | Msa0681770:intron | 45.0% | |
| TATGACCCAGGTGGATATTG+TGG | - | chr4_4:42448692-42448711 | Msa0681770:intron | 45.0% | |
| AGATGCCACAATATCCACCT+GGG | + | chr4_4:42448700-42448719 | None:intergenic | 45.0% | |
| AAGATGCCACAATATCCACC+TGG | + | chr4_4:42448701-42448720 | None:intergenic | 45.0% | |
| ! | TGCCCCATTTGGTGATTCTT+TGG | - | chr4_4:42448749-42448768 | Msa0681770:intron | 45.0% |
| TTAGTAGCACAGCTCCTTCA+CGG | - | chr4_4:42448817-42448836 | Msa0681770:CDS | 45.0% | |
| ! | ATTTCTGGAAGCAGCGTGTA+CGG | + | chr4_4:42449313-42449332 | None:intergenic | 45.0% |
| ACTGCCCACTTCACTAAATC+TGG | - | chr4_4:42449541-42449560 | Msa0681770:intron | 45.0% | |
| ACAGATGCTCTACCAGTACA+CGG | - | chr4_4:42449663-42449682 | Msa0681770:intron | 45.0% | |
| TAATGCTCAAACCCGTGTAC+TGG | + | chr4_4:42449678-42449697 | None:intergenic | 45.0% | |
| ACACGGGTTTGAGCATTACA+AGG | - | chr4_4:42449680-42449699 | Msa0681770:intron | 45.0% | |
| GTGTGGTATCAGTACATGTG+TGG | - | chr4_4:42449846-42449865 | Msa0681770:CDS | 45.0% | |
| TGGTATCAGTACATGTGTGG+TGG | - | chr4_4:42449849-42449868 | Msa0681770:CDS | 45.0% | |
| GGGAGATGGAGAAGATAGAT+GGG | + | chr4_4:42449979-42449998 | None:intergenic | 45.0% | |
| AGGGAGATGGAGAAGATAGA+TGG | + | chr4_4:42449980-42449999 | None:intergenic | 45.0% | |
| CAGGGGAAGTTTGATCTGTA+TGG | + | chr4_4:42450010-42450029 | None:intergenic | 45.0% | |
| CTACAATGAGGTCATCGAAG+GGG | + | chr4_4:42450039-42450058 | None:intergenic | 45.0% | |
| CACTACAATGAGGTCATCGA+AGG | + | chr4_4:42450041-42450060 | None:intergenic | 45.0% | |
| GACTGACAACTTTGTCTCAC+TGG | - | chr4_4:42450219-42450238 | Msa0681770:intron | 45.0% | |
| CATTATGTCCCTGGGAACTT+AGG | - | chr4_4:42450262-42450281 | Msa0681770:intron | 45.0% | |
| CATACAGTTCCTAAGTTCCC+AGG | + | chr4_4:42450274-42450293 | None:intergenic | 45.0% | |
| CTGGGAACTTAGGAACTGTA+TGG | - | chr4_4:42450272-42450291 | Msa0681770:intron | 45.0% | |
| TGAACCTCTGTCTTGGGATT+TGG | - | chr4_4:42450598-42450617 | Msa0681770:CDS | 45.0% | |
| CAGTGATTGTATGTTTGGGG+GGG | - | chr4_4:42450989-42451008 | Msa0681770:intron | 45.0% | |
| AGTGATTGTATGTTTGGGGG+GGG | - | chr4_4:42450990-42451009 | Msa0681770:intron | 45.0% | |
| CACAGCAGCATATGTTGAAG+GGG | + | chr4_4:42451414-42451433 | None:intergenic | 45.0% | |
| GCACAGCAGCATATGTTGAA+GGG | + | chr4_4:42451415-42451434 | None:intergenic | 45.0% | |
| ! | TGGTAACTGAAGAATGGGCT+AGG | - | chr4_4:42451581-42451600 | Msa0681770:intron | 45.0% |
| !! | AATGGGCTAGGATGCTCAAT+TGG | - | chr4_4:42451593-42451612 | Msa0681770:intron | 45.0% |
| TGAATAGTGAGGTGGGTGAA+TGG | - | chr4_4:42451640-42451659 | Msa0681770:intron | 45.0% | |
| ! | TTCTTTGAGGAGCTTAGCTC+CGG | - | chr4_4:42451690-42451709 | Msa0681770:intron | 45.0% |
| GAAATGATTCCCAACTACCC+CGG | + | chr4_4:42451712-42451731 | None:intergenic | 45.0% | |
| AACCCGGAAATACCGATCTA+TGG | + | chr4_4:42451807-42451826 | None:intergenic | 45.0% | |
| CTTGGCTTCTTCAACATGGA+TGG | - | chr4_4:42451975-42451994 | Msa0681770:five_prime_UTR | 45.0% | |
| AGCTGTGGTTGAATCTAGTC+AGG | - | chr4_4:42452012-42452031 | Msa0681770:five_prime_UTR | 45.0% | |
| GCTGTGGTTGAATCTAGTCA+GGG | - | chr4_4:42452013-42452032 | Msa0681770:five_prime_UTR | 45.0% | |
| ACGCAGTGAACTACTTGATG+AGG | - | chr4_4:42452036-42452055 | Msa0681770:five_prime_UTR | 45.0% | |
| !!! | ATTTTAATTATAATATAAGT+AGG | + | chr4_4:42451903-42451922 | None:intergenic | 5.0% |
| !! | CTTATATTATAATTAAAATA+TGG | - | chr4_4:42451904-42451923 | Msa0681770:CDS | 5.0% |
| GTAGATCTGTTTCGTTGCGC+TGG | + | chr4_4:42446490-42446509 | None:intergenic | 50.0% | |
| ACGATGATGAAGAAGAGCCG+AGG | - | chr4_4:42446692-42446711 | Msa0681770:intron | 50.0% | |
| TGATGCCGCGTCTTGTGTTT+CGG | - | chr4_4:42446762-42446781 | Msa0681770:intron | 50.0% | |
| AGCAACCGAAACACAAGACG+CGG | + | chr4_4:42446770-42446789 | None:intergenic | 50.0% | |
| CTGCACGTGATATCTCTCGA+AGG | + | chr4_4:42447593-42447612 | None:intergenic | 50.0% | |
| GTCCAAAGCAATCGCCTTCA+TGG | + | chr4_4:42447864-42447883 | None:intergenic | 50.0% | |
| !! | GGAGAGCAAGTCTTGTTGCT+TGG | - | chr4_4:42448123-42448142 | Msa0681770:intron | 50.0% |
| GTTGCTTGGGCCAATGATGT+CGG | - | chr4_4:42448137-42448156 | Msa0681770:intron | 50.0% | |
| !! | GATTCCTCACTTGGTTTGGC+AGG | - | chr4_4:42448241-42448260 | Msa0681770:intron | 50.0% |
| CTAACCTGCCAAACCAAGTG+AGG | + | chr4_4:42448248-42448267 | None:intergenic | 50.0% | |
| TTGCAAGTATGCCCCATTGG+TGG | + | chr4_4:42448658-42448677 | None:intergenic | 50.0% | |
| ATCTCAGGACTTGCCCCATT+TGG | - | chr4_4:42448738-42448757 | Msa0681770:intron | 50.0% | |
| GCCCATTAATCAGGCCGATT+AGG | + | chr4_4:42448997-42449016 | None:intergenic | 50.0% | |
| CAGATGCTCTACCAGTACAC+GGG | - | chr4_4:42449664-42449683 | Msa0681770:intron | 50.0% | |
| ! | CATGTGTGGTGGAGTTACAG+TGG | - | chr4_4:42449860-42449879 | Msa0681770:CDS | 50.0% |
| GGTGGAGTTACAGTGGAAAC+TGG | - | chr4_4:42449867-42449886 | Msa0681770:CDS | 50.0% | |
| ! | AGAAGAAAGAGGGAGAGTGC+AGG | + | chr4_4:42449943-42449962 | None:intergenic | 50.0% |
| TCATCGAAGGGGAATTGGCA+GGG | + | chr4_4:42450028-42450047 | None:intergenic | 50.0% | |
| TGAGGTCATCGAAGGGGAAT+TGG | + | chr4_4:42450033-42450052 | None:intergenic | 50.0% | |
| CCTCTGTCTTGGGATTTGGA+CGG | - | chr4_4:42450602-42450621 | Msa0681770:CDS | 50.0% | |
| GTGATTGTATGTTTGGGGGG+GGG | - | chr4_4:42450991-42451010 | Msa0681770:intron | 50.0% | |
| TGATTGTATGTTTGGGGGGG+GGG | - | chr4_4:42450992-42451011 | Msa0681770:intron | 50.0% | |
| TCCAATGCAGTGGCTTGATG+TGG | - | chr4_4:42451180-42451199 | Msa0681770:intron | 50.0% | |
| GGCACAGCAGCATATGTTGA+AGG | + | chr4_4:42451416-42451435 | None:intergenic | 50.0% | |
| TAGTTCCTTGAGGGCAACGA+TGG | + | chr4_4:42451476-42451495 | None:intergenic | 50.0% | |
| TGAGGTGGGTGAATGGTAGT+AGG | - | chr4_4:42451647-42451666 | Msa0681770:intron | 50.0% | |
| ! | TCTTTGAGGAGCTTAGCTCC+GGG | - | chr4_4:42451691-42451710 | Msa0681770:intron | 50.0% |
| ! | TTTTCCGACGACGAAGCCAC+CGG | - | chr4_4:42446549-42446568 | Msa0681770:CDS | 55.0% |
| GCTGAAAGGATGATCGCGCT+TGG | - | chr4_4:42446787-42446806 | Msa0681770:intron | 55.0% | |
| GATGATCGCGCTTGGTACTC+AGG | - | chr4_4:42446795-42446814 | Msa0681770:intron | 55.0% | |
| TGAGTACCATCGGCCCATGA+AGG | - | chr4_4:42447847-42447866 | Msa0681770:intron | 55.0% | |
| GCCCATGAAGGCGATTGCTT+TGG | - | chr4_4:42447859-42447878 | Msa0681770:intron | 55.0% | |
| GTTTGGCTATCATCGGGACC+AGG | - | chr4_4:42447964-42447983 | Msa0681770:intron | 55.0% | |
| GGCCAATGATGTCGGAGTGA+AGG | - | chr4_4:42448145-42448164 | Msa0681770:intron | 55.0% | |
| GGAATCAAAAGCTCGGGGTG+TGG | + | chr4_4:42448227-42448246 | None:intergenic | 55.0% | |
| TCCTGTGCTTGGTATGACCC+AGG | - | chr4_4:42448680-42448699 | Msa0681770:intron | 55.0% | |
| ACCTGGGTCATACCAAGCAC+AGG | + | chr4_4:42448684-42448703 | None:intergenic | 55.0% | |
| TGTGCTTGGTATGACCCAGG+TGG | - | chr4_4:42448683-42448702 | Msa0681770:intron | 55.0% | |
| AGGAAGGGGAGGGTTTACTG+TGG | + | chr4_4:42449068-42449087 | None:intergenic | 55.0% | |
| CATCGAAGGGGAATTGGCAG+GGG | + | chr4_4:42450027-42450046 | None:intergenic | 55.0% | |
| GTCATCGAAGGGGAATTGGC+AGG | + | chr4_4:42450029-42450048 | None:intergenic | 55.0% | |
| CCGTCCAAATCCCAAGACAG+AGG | + | chr4_4:42450605-42450624 | None:intergenic | 55.0% | |
| GTAGGTAGCAGTTATGCCGG+TGG | - | chr4_4:42450733-42450752 | Msa0681770:CDS | 55.0% | |
| CAGTTATGCCGGTGGTCAGT+GGG | - | chr4_4:42450741-42450760 | Msa0681770:CDS | 55.0% | |
| GATTGTATGTTTGGGGGGGG+GGG | - | chr4_4:42450993-42451012 | Msa0681770:intron | 55.0% | |
| ATTGTATGTTTGGGGGGGGG+GGG | - | chr4_4:42450994-42451013 | Msa0681770:intron | 55.0% | |
| GCCACATCAAGCCACTGCAT+TGG | + | chr4_4:42451184-42451203 | None:intergenic | 55.0% | |
| TCCATCCATCGTTGCCCTCA+AGG | - | chr4_4:42451468-42451487 | Msa0681770:intron | 55.0% | |
| TCCTTGAGGGCAACGATGGA+TGG | + | chr4_4:42451472-42451491 | None:intergenic | 55.0% | |
| ! | CTTTGAGGAGCTTAGCTCCG+GGG | - | chr4_4:42451692-42451711 | Msa0681770:CDS | 55.0% |
| AGCTTAGCTCCGGGGTAGTT+GGG | - | chr4_4:42451700-42451719 | Msa0681770:CDS | 55.0% | |
| TTTCCGACGACGAAGCCACC+GGG | - | chr4_4:42446550-42446569 | Msa0681770:CDS | 60.0% | |
| ATTCCCGGTGGCTTCGTCGT+CGG | + | chr4_4:42446556-42446575 | None:intergenic | 60.0% | |
| !! | CCGGTGGAATCGGTGCCATT+CGG | + | chr4_4:42446585-42446604 | None:intergenic | 60.0% |
| !! | CCGAATGGCACCGATTCCAC+CGG | - | chr4_4:42446582-42446601 | Msa0681770:intron | 60.0% |
| !! | GCACCGATTCCACCGGAGAA+CGG | - | chr4_4:42446589-42446608 | Msa0681770:intron | 60.0% |
| ACGCCGTTCTCCGGTGGAAT+CGG | + | chr4_4:42446595-42446614 | None:intergenic | 60.0% | |
| ATCGCGCTTGGTACTCAGGC+TGG | - | chr4_4:42446799-42446818 | Msa0681770:intron | 60.0% | |
| TCGCGCTTGGTACTCAGGCT+GGG | - | chr4_4:42446800-42446819 | Msa0681770:intron | 60.0% | |
| CAATCGCCTTCATGGGCCGA+TGG | + | chr4_4:42447856-42447875 | None:intergenic | 60.0% | |
| TAGCACAGCTCCTTCACGGC+AGG | - | chr4_4:42448821-42448840 | Msa0681770:CDS | 60.0% | |
| CTTGCTCACGCTCCCTTCTC+AGG | - | chr4_4:42449717-42449736 | Msa0681770:CDS | 60.0% | |
| GCAGTTATGCCGGTGGTCAG+TGG | - | chr4_4:42450740-42450759 | Msa0681770:CDS | 60.0% | |
| TTGTATGTTTGGGGGGGGGG+GGG | - | chr4_4:42450995-42451014 | Msa0681770:intron | 60.0% | |
| GAGCTTAGCTCCGGGGTAGT+TGG | - | chr4_4:42451699-42451718 | Msa0681770:CDS | 60.0% | |
| TGTATGTTTGGGGGGGGGGG+GGG | - | chr4_4:42450996-42451015 | Msa0681770:intron | 65.0% | |
| ! | CCACCGGAGAACGGCGTCGA+CGG | - | chr4_4:42446598-42446617 | Msa0681770:intron | 70.0% |
| TCGCCGTCGACGCCGTTCTC+CGG | + | chr4_4:42446604-42446623 | None:intergenic | 70.0% | |
| TCGGGGTGTGGACATCCCCG+TGG | + | chr4_4:42448215-42448234 | None:intergenic | 70.0% | |
| GCCTGCAGCCCACTGACCAC+CGG | + | chr4_4:42450752-42450771 | None:intergenic | 70.0% | |
| GTATGTTTGGGGGGGGGGGG+GGG | - | chr4_4:42450997-42451016 | Msa0681770:intron | 70.0% | |
| TATGTTTGGGGGGGGGGGGG+GGG | - | chr4_4:42450998-42451017 | Msa0681770:intron | 70.0% | |
| CCGTCGACGCCGTTCTCCGG+TGG | + | chr4_4:42446601-42446620 | None:intergenic | 75.0% | |
| !! | GCCGGTGGTCAGTGGGCTGC+AGG | - | chr4_4:42450748-42450767 | Msa0681770:CDS | 75.0% |
| ATGTTTGGGGGGGGGGGGGG+GGG | - | chr4_4:42450999-42451018 | Msa0681770:intron | 75.0% | |
| ! | TGTTTGGGGGGGGGGGGGGG+GGG | - | chr4_4:42451000-42451019 | Msa0681770:intron | 80.0% |
| ! | GTTTGGGGGGGGGGGGGGGG+GGG | - | chr4_4:42451001-42451020 | Msa0681770:intron | 85.0% |
| ! | TTTGGGGGGGGGGGGGGGGG+GGG | - | chr4_4:42451002-42451021 | Msa0681770:intron | 85.0% |
| ! | GGGGGGGGGGGGGGGGGATT+TGG | - | chr4_4:42451012-42451031 | Msa0681770:intron | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | - | chr4_4:42451003-42451022 | Msa0681770:intron | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr4_4:42451004-42451023 | Msa0681770:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 42446409 | 42452138 | 42446409 | ID=Msa0681770;Name=Msa0681770 |
| chr4_4 | mRNA | 42446409 | 42452138 | 42446409 | ID=Msa0681770-mRNA-1;Parent=Msa0681770;Name=Msa0681770-mRNA-1;_AED=0.03;_eAED=0.03;_QI=177|1|0.85|1|1|1|7|0|463 |
| chr4_4 | exon | 42446409 | 42446592 | 42446409 | ID=Msa0681770-mRNA-1:exon:10198;Parent=Msa0681770-mRNA-1 |
| chr4_4 | exon | 42447720 | 42447810 | 42447720 | ID=Msa0681770-mRNA-1:exon:10197;Parent=Msa0681770-mRNA-1 |
| chr4_4 | exon | 42448809 | 42448941 | 42448809 | ID=Msa0681770-mRNA-1:exon:10196;Parent=Msa0681770-mRNA-1 |
| chr4_4 | exon | 42449705 | 42449965 | 42449705 | ID=Msa0681770-mRNA-1:exon:10195;Parent=Msa0681770-mRNA-1 |
| chr4_4 | exon | 42450285 | 42450464 | 42450285 | ID=Msa0681770-mRNA-1:exon:10194;Parent=Msa0681770-mRNA-1 |
| chr4_4 | exon | 42450562 | 42450834 | 42450562 | ID=Msa0681770-mRNA-1:exon:10193;Parent=Msa0681770-mRNA-1 |
| chr4_4 | exon | 42451692 | 42452138 | 42451692 | ID=Msa0681770-mRNA-1:exon:10192;Parent=Msa0681770-mRNA-1 |
| chr4_4 | five_prime_UTR | 42451962 | 42452138 | 42451962 | ID=Msa0681770-mRNA-1:five_prime_utr;Parent=Msa0681770-mRNA-1 |
| chr4_4 | CDS | 42451692 | 42451961 | 42451692 | ID=Msa0681770-mRNA-1:cds;Parent=Msa0681770-mRNA-1 |
| chr4_4 | CDS | 42450562 | 42450834 | 42450562 | ID=Msa0681770-mRNA-1:cds;Parent=Msa0681770-mRNA-1 |
| chr4_4 | CDS | 42450285 | 42450464 | 42450285 | ID=Msa0681770-mRNA-1:cds;Parent=Msa0681770-mRNA-1 |
| chr4_4 | CDS | 42449705 | 42449965 | 42449705 | ID=Msa0681770-mRNA-1:cds;Parent=Msa0681770-mRNA-1 |
| chr4_4 | CDS | 42448809 | 42448941 | 42448809 | ID=Msa0681770-mRNA-1:cds;Parent=Msa0681770-mRNA-1 |
| chr4_4 | CDS | 42447720 | 42447810 | 42447720 | ID=Msa0681770-mRNA-1:cds;Parent=Msa0681770-mRNA-1 |
| chr4_4 | CDS | 42446409 | 42446592 | 42446409 | ID=Msa0681770-mRNA-1:cds;Parent=Msa0681770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
