Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0685480 | XP_003606819.1 | 84.367 | 403 | 9 | 2 | 4 | 352 | 3 | 405 | 0.0 | 669 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0685480 | sp|O04153|CALR3_ARATH | 79.874 | 318 | 64 | 0 | 35 | 352 | 92 | 409 | 0.0 | 514 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0685480 | G7JEV8 | 84.367 | 403 | 9 | 2 | 4 | 352 | 3 | 405 | 0.0 | 669 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0685480 | Msa1072960 | 0.801268 | 9.756461e-49 | -8.615850e-47 |
| Msa0307280 | Msa0685480 | 0.807356 | 5.261134e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0685480 | MtrunA17_Chr4g0033731 | 84.367 | 403 | 9 | 2 | 4 | 352 | 3 | 405 | 0.0 | 669 |
| Msa0685480 | MtrunA17_Chr7g0249551 | 84.691 | 307 | 46 | 1 | 35 | 341 | 89 | 394 | 1.10e-180 | 507 |
| Msa0685480 | MtrunA17_Chr1g0192661 | 65.414 | 266 | 92 | 0 | 33 | 298 | 86 | 351 | 7.98e-126 | 367 |
| Msa0685480 | MtrunA17_Chr8g0385501 | 37.908 | 306 | 136 | 10 | 39 | 292 | 97 | 400 | 1.64e-46 | 166 |
| Msa0685480 | MtrunA17_Chr3g0131441 | 36.364 | 308 | 142 | 9 | 39 | 294 | 94 | 399 | 2.17e-44 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0685480 | AT1G08450.1 | 79.874 | 318 | 64 | 0 | 35 | 352 | 92 | 409 | 0.0 | 514 |
| Msa0685480 | AT1G08450.3 | 72.956 | 318 | 61 | 1 | 35 | 352 | 92 | 384 | 2.86e-159 | 452 |
| Msa0685480 | AT1G09210.1 | 63.929 | 280 | 101 | 0 | 33 | 312 | 84 | 363 | 7.39e-129 | 375 |
| Msa0685480 | AT1G56340.2 | 63.929 | 280 | 101 | 0 | 33 | 312 | 84 | 363 | 1.01e-128 | 375 |
| Msa0685480 | AT1G56340.1 | 63.929 | 280 | 101 | 0 | 33 | 312 | 84 | 363 | 3.78e-128 | 374 |
| Msa0685480 | AT1G08450.2 | 60.759 | 316 | 70 | 2 | 35 | 350 | 92 | 353 | 5.23e-115 | 338 |
| Msa0685480 | AT5G61790.1 | 37.742 | 310 | 139 | 9 | 36 | 293 | 87 | 394 | 1.34e-57 | 195 |
| Msa0685480 | AT5G07340.1 | 36.765 | 340 | 153 | 12 | 42 | 329 | 95 | 424 | 1.31e-46 | 166 |
| Msa0685480 | AT5G07340.2 | 36.765 | 340 | 153 | 12 | 42 | 329 | 103 | 432 | 1.48e-46 | 166 |
Find 99 sgRNAs with CRISPR-Local
Find 508 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATGCCAACATACTTTAT+TGG | 0.145055 | 4_4:+49619489 | None:intergenic |
| GTATGCTGGATTAGGAATTT+TGG | 0.215109 | 4_4:+49620080 | None:intergenic |
| CACCAGGGTTCTGTTCTTAT+TGG | 0.259124 | 4_4:+49622365 | None:intergenic |
| GGTTACATCAAACTTCTTTC+GGG | 0.261173 | 4_4:-49622297 | Msa0685480:CDS |
| TGGTTACATCAAACTTCTTT+CGG | 0.263951 | 4_4:-49622298 | Msa0685480:CDS |
| AAGAATATATGGTTAATAAT+AGG | 0.283521 | 4_4:-49619249 | Msa0685480:CDS |
| AGAGAGAGGGGCAGTAGATA+TGG | 0.294547 | 4_4:-49618937 | Msa0685480:CDS |
| TTCCACTTTCCCTTGTAGTT+GGG | 0.297629 | 4_4:+49619942 | None:intergenic |
| TTGGCGGTGATACTCCTTAT+AGG | 0.301600 | 4_4:-49622254 | Msa0685480:intron |
| CTTCCACTTTCCCTTGTAGT+TGG | 0.304273 | 4_4:+49619941 | None:intergenic |
| GCAAGTTGTGGAAGAATATA+TGG | 0.315690 | 4_4:-49619260 | Msa0685480:CDS |
| CAAGGATGTCAAAGCGAAAA+AGG | 0.316348 | 4_4:-49621011 | Msa0685480:intron |
| TCCCGATCCGAAAGCCAAAA+AGG | 0.324030 | 4_4:-49620270 | Msa0685480:intron |
| GCTTAATGCAGTTTGATGTT+TGG | 0.329009 | 4_4:-49621259 | Msa0685480:intron |
| ACCTCTGGTTTGACATCATC+AGG | 0.330343 | 4_4:+49620720 | None:intergenic |
| CACTCCAGATTCTTTCTAAT+AGG | 0.332719 | 4_4:+49621169 | None:intergenic |
| AAGAAATCAATGAACCTATA+AGG | 0.356952 | 4_4:+49622240 | None:intergenic |
| GATAATCGAGAAAGAGATTC+TGG | 0.369820 | 4_4:-49621076 | Msa0685480:CDS |
| AGAATATATGGTTAATAATA+GGG | 0.377299 | 4_4:-49619248 | Msa0685480:CDS |
| TATGTCAATCAGAAGAAGTT+TGG | 0.379337 | 4_4:-49622273 | Msa0685480:CDS |
| TTATCCTATTAGAAAGAATC+TGG | 0.392674 | 4_4:-49621173 | Msa0685480:CDS |
| TCTATTGCAGCCAGCAGATT+GGG | 0.394070 | 4_4:-49620766 | Msa0685480:intron |
| TTTGTTTCCTGCAGAATTTG+AGG | 0.400410 | 4_4:-49619538 | Msa0685480:intron |
| GGTCCTCTGTATGCTGGATT+AGG | 0.400688 | 4_4:+49620072 | None:intergenic |
| TTCCATGGTCCTCTGTATGC+TGG | 0.401308 | 4_4:+49620066 | None:intergenic |
| GCGAAAAGAGGAGGAGAGAG+AGG | 0.405303 | 4_4:-49618951 | Msa0685480:CDS |
| AATGAAAAGTGATTATTAGA+AGG | 0.405531 | 4_4:+49625741 | None:intergenic |
| CTCTATTGCAGCCAGCAGAT+TGG | 0.417061 | 4_4:-49620767 | Msa0685480:intron |
| ATGATGAAGATGATGGACTA+TGG | 0.427549 | 4_4:-49620110 | Msa0685480:CDS |
| TCCACTTTCCCTTGTAGTTG+GGG | 0.429764 | 4_4:+49619943 | None:intergenic |
| GTATTCTATTAAATTTGAAC+AGG | 0.436462 | 4_4:-49622337 | Msa0685480:CDS |
| TGTTTGACTAGCCTGCTGAC+TGG | 0.450718 | 4_4:-49620134 | Msa0685480:intron |
| ATTATCGACAAGGACACTAT+AGG | 0.464406 | 4_4:+49621093 | None:intergenic |
| CTGGTAGCATGTACACAGAT+TGG | 0.467406 | 4_4:-49621057 | Msa0685480:CDS |
| TTCGGATCGGGAATTTCCGC+TGG | 0.467739 | 4_4:+49620281 | None:intergenic |
| CCATGTTATATTGTCATACC+AGG | 0.473885 | 4_4:-49621203 | Msa0685480:CDS |
| GGTTTCAGCACATAAAGATC+AGG | 0.477024 | 4_4:+49619510 | None:intergenic |
| CGAAAAGAGGAGGAGAGAGA+GGG | 0.477617 | 4_4:-49618950 | Msa0685480:CDS |
| GTTTGACTAGCCTGCTGACT+GGG | 0.479098 | 4_4:-49620133 | Msa0685480:intron |
| TGAAGAACCTTTCGTTTCCA+TGG | 0.479653 | 4_4:+49620051 | None:intergenic |
| CAAGAGAAGAGGGCGAAAAG+AGG | 0.485876 | 4_4:-49618963 | Msa0685480:CDS |
| TTTGAATTTCAGGTAAAGGC+TGG | 0.487948 | 4_4:-49619331 | Msa0685480:intron |
| GCTCGAAGGGCAAGAGAAGA+GGG | 0.503612 | 4_4:-49618973 | Msa0685480:CDS |
| ATGCAGTTTGATGTTTGGAC+CGG | 0.506719 | 4_4:-49621254 | Msa0685480:intron |
| TGGTAGCATGTACACAGATT+GGG | 0.507286 | 4_4:-49621056 | Msa0685480:CDS |
| GCAGTAGATATGGAGATAAG+AGG | 0.516281 | 4_4:-49618927 | Msa0685480:CDS |
| GTTTGTGTACCACATAGATC+CGG | 0.516433 | 4_4:+49621235 | None:intergenic |
| ACAACTTGCTTTGCATACTG+TGG | 0.516512 | 4_4:+49619274 | None:intergenic |
| TCTCTATCATCCCAATCTGC+TGG | 0.517078 | 4_4:+49620756 | None:intergenic |
| GAAAAGAGGAGGAGAGAGAG+GGG | 0.519240 | 4_4:-49618949 | Msa0685480:CDS |
| CAGGATATTGAGTGTGGTGG+TGG | 0.525477 | 4_4:-49622318 | Msa0685480:CDS |
| GGCTCGAAGGGCAAGAGAAG+AGG | 0.530539 | 4_4:-49618974 | Msa0685480:CDS |
| AATCAAGAACCCCAACTACA+AGG | 0.530823 | 4_4:-49619952 | Msa0685480:CDS |
| GACTGGGATGATGAAGATGA+TGG | 0.536970 | 4_4:-49620117 | Msa0685480:CDS |
| ACCCCAACTACAAGGGAAAG+TGG | 0.537866 | 4_4:-49619944 | Msa0685480:CDS |
| TAATAGGATAATTCTGCCCC+TGG | 0.538118 | 4_4:+49621185 | None:intergenic |
| CTCTTTCTCGATTATCGACA+AGG | 0.541665 | 4_4:+49621083 | None:intergenic |
| TTCGAAGAAGACTTCAGCAA+AGG | 0.543435 | 4_4:+49625715 | None:intergenic |
| CCTTCCTCCAAGGAAAATCA+AGG | 0.544194 | 4_4:-49621029 | Msa0685480:CDS |
| GTCAATCAGAAGAAGTTTGG+CGG | 0.550880 | 4_4:-49622270 | Msa0685480:CDS |
| AGGGAAAGTGGAAGACTCCA+TGG | 0.551615 | 4_4:-49619932 | Msa0685480:CDS |
| AGGACACTATAGGAGGCATC+AGG | 0.553777 | 4_4:+49621103 | None:intergenic |
| TAATAGAATACTGAAGCACC+AGG | 0.555033 | 4_4:+49622349 | None:intergenic |
| TCTTCATCATCCCAGTCAGC+AGG | 0.556291 | 4_4:+49620123 | None:intergenic |
| TGTTGGCATTGAAGTGTGGC+AGG | 0.558687 | 4_4:-49619478 | Msa0685480:intron |
| GAGATAAGAGGCGCCGTAGG+AGG | 0.561496 | 4_4:-49618915 | Msa0685480:CDS |
| ATTTCTATACATTCATTCTG+AGG | 0.562782 | 4_4:-49621126 | Msa0685480:CDS |
| ATGGAGATAAGAGGCGCCGT+AGG | 0.572887 | 4_4:-49618918 | Msa0685480:CDS |
| CAACTTGCTTTGCATACTGT+GGG | 0.578363 | 4_4:+49619275 | None:intergenic |
| AAGAAGGGCTCGGGAAGAAG+AGG | 0.584687 | 4_4:-49619096 | Msa0685480:intron |
| TAATTATGTAGGAGGCTCGA+AGG | 0.586649 | 4_4:-49618987 | Msa0685480:intron |
| GTACCTGGGTTATCAATCCA+TGG | 0.586860 | 4_4:+49619915 | None:intergenic |
| GAGAAGAGGGCGAAAAGAGG+AGG | 0.590636 | 4_4:-49618960 | Msa0685480:CDS |
| ATCAAGAACCCCAACTACAA+GGG | 0.604238 | 4_4:-49619951 | Msa0685480:CDS |
| AGAAAAGGCTTACCCTCCTA+CGG | 0.611772 | 4_4:+49618902 | None:intergenic |
| CTGAAACCAATAAAGTATGT+TGG | 0.613261 | 4_4:-49619495 | Msa0685480:CDS |
| AGATAAGAGGCGCCGTAGGA+GGG | 0.614360 | 4_4:-49618914 | None:intergenic |
| CCTGGTATGACAATATAACA+TGG | 0.616973 | 4_4:+49621203 | None:intergenic |
| AATTATGTAGGAGGCTCGAA+GGG | 0.625683 | 4_4:-49618986 | Msa0685480:intron |
| TTCTTCGAAGAAACATTCCA+AGG | 0.625841 | 4_4:-49625701 | Msa0685480:intron |
| ATTGGGACATCCTTCCTCCA+AGG | 0.634489 | 4_4:-49621039 | Msa0685480:CDS |
| ATCGACAAGGACACTATAGG+AGG | 0.637459 | 4_4:+49621096 | None:intergenic |
| ATGTTTGGACCGGATCTATG+TGG | 0.646001 | 4_4:-49621244 | Msa0685480:CDS |
| CCTCTGGTTTGACATCATCA+GGG | 0.652041 | 4_4:+49620721 | None:intergenic |
| ATATATGGTTAATAATAGGG+AGG | 0.656632 | 4_4:-49619245 | Msa0685480:intron |
| CATGTTATATTGTCATACCA+GGG | 0.660252 | 4_4:-49621202 | Msa0685480:CDS |
| TTTGAACAGGATATTGAGTG+TGG | 0.661470 | 4_4:-49622324 | Msa0685480:CDS |
| ACAGTATGCAAAGCAAGTTG+TGG | 0.662036 | 4_4:-49619272 | Msa0685480:CDS |
| CAGAGGACCATGGAAACGAA+AGG | 0.663800 | 4_4:-49620058 | Msa0685480:intron |
| GGGATATGATTCAATTCCAG+CGG | 0.666694 | 4_4:-49620297 | Msa0685480:CDS |
| ATGTTATATTGTCATACCAG+GGG | 0.671492 | 4_4:-49621201 | Msa0685480:CDS |
| ATCCAGCATACAGAGGACCA+TGG | 0.675114 | 4_4:-49620068 | Msa0685480:CDS |
| CCCTGATGATGTCAAACCAG+AGG | 0.679467 | 4_4:-49620721 | Msa0685480:intron |
| ATTCCTAATCCAGCATACAG+AGG | 0.680448 | 4_4:-49620075 | Msa0685480:CDS |
| GACCAATAAGAACAGAACCC+TGG | 0.691427 | 4_4:-49622367 | Msa0685480:CDS |
| AGTATGTTGGCATTGAAGTG+TGG | 0.694735 | 4_4:-49619482 | Msa0685480:CDS |
| GAACAGGATATTGAGTGTGG+TGG | 0.695916 | 4_4:-49622321 | Msa0685480:CDS |
| AATAGAATACTGAAGCACCA+GGG | 0.711638 | 4_4:+49622350 | None:intergenic |
| ACTCCATGGATTGATAACCC+AGG | 0.732011 | 4_4:-49619918 | Msa0685480:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTTTTTTAATACAAAAA+AGG | + | chr4_4:49619326-49619345 | None:intergenic | 10.0% |
| !!! | ATAATTCTATAACTTATTTT+TGG | - | chr4_4:49620293-49620312 | Msa0685480:CDS | 10.0% |
| !! | TATATATATATATATATCAC+TGG | + | chr4_4:49621384-49621403 | None:intergenic | 10.0% |
| !!! | TTTTATATATATTTCCTTAA+AGG | + | chr4_4:49624144-49624163 | None:intergenic | 10.0% |
| !!! | TACTATAATATACTATTTTT+AGG | + | chr4_4:49624275-49624294 | None:intergenic | 10.0% |
| !!! | TTAGAATTTTAAAATAGATT+TGG | - | chr4_4:49624834-49624853 | Msa0685480:intron | 10.0% |
| !! | TTCAAATTATCAAAATATAA+CGG | + | chr4_4:49625352-49625371 | None:intergenic | 10.0% |
| !!! | TTTTTTAATACAAAAAAGGA+AGG | + | chr4_4:49619322-49619341 | None:intergenic | 15.0% |
| !!! | AATTTAAAGTTTTAATGCAA+AGG | - | chr4_4:49620123-49620142 | Msa0685480:CDS | 15.0% |
| !! | AGATTGTAAAATAGTATATT+AGG | - | chr4_4:49620199-49620218 | Msa0685480:intron | 15.0% |
| !!! | ATTTGTTTGAAATTTTTTAC+AGG | + | chr4_4:49620795-49620814 | None:intergenic | 15.0% |
| !!! | TTTGTTTTGTAATACAAAAA+AGG | - | chr4_4:49621641-49621660 | Msa0685480:intron | 15.0% |
| !!! | TTTTTTTCATATAAGCTATT+CGG | - | chr4_4:49622021-49622040 | Msa0685480:intron | 15.0% |
| !! | TAAATTTACCTATTAAAAAG+AGG | + | chr4_4:49622732-49622751 | None:intergenic | 15.0% |
| !! | TATATATAAAATTAGAAACC+TGG | - | chr4_4:49624153-49624172 | Msa0685480:intron | 15.0% |
| !!! | TTATTCTTTTTAAGTTTTGT+CGG | - | chr4_4:49624195-49624214 | Msa0685480:intron | 15.0% |
| !! | ATAGTATATTATAGTAAGAA+TGG | - | chr4_4:49624279-49624298 | Msa0685480:intron | 15.0% |
| !! | AAAATATTAAACACGAAAAA+AGG | + | chr4_4:49624544-49624563 | None:intergenic | 15.0% |
| !! | TAAAAATTTGTAATGTTTCA+GGG | + | chr4_4:49625123-49625142 | None:intergenic | 15.0% |
| !! | ATAAAAATTTGTAATGTTTC+AGG | + | chr4_4:49625124-49625143 | None:intergenic | 15.0% |
| !!! | ATTTTGATAATTTGAATTTC+AGG | - | chr4_4:49625356-49625375 | Msa0685480:intron | 15.0% |
| !! | AAGAATATATGGTTAATAAT+AGG | - | chr4_4:49625448-49625467 | Msa0685480:intron | 15.0% |
| !! | AGAATATATGGTTAATAATA+GGG | - | chr4_4:49625449-49625468 | Msa0685480:intron | 15.0% |
| !!! | ATAATCATATTTGTTTTTGA+AGG | - | chr4_4:49625670-49625689 | Msa0685480:intron | 15.0% |
| !!! | TAATCATATTTGTTTTTGAA+GGG | - | chr4_4:49625671-49625690 | Msa0685480:intron | 15.0% |
| !! | TACATAATTATAACATCAAA+TGG | + | chr4_4:49625700-49625719 | None:intergenic | 15.0% |
| !! | ATTTGATGTTATAATTATGT+AGG | - | chr4_4:49625699-49625718 | Msa0685480:intron | 15.0% |
| !! | AATGAAAAGTGATTATTAGA+AGG | + | chr4_4:49618959-49618978 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAAAAAGATGGG+TGG | - | chr4_4:49619137-49619156 | Msa0685480:intron | 20.0% |
| !! | ATCAAAATCAATCATTGAAA+AGG | + | chr4_4:49619605-49619624 | None:intergenic | 20.0% |
| !!! | ATTAATTTGACCAATTTTGA+TGG | - | chr4_4:49619833-49619852 | Msa0685480:intron | 20.0% |
| !! | TGCATATAGTAAATAATTTC+TGG | + | chr4_4:49620701-49620720 | None:intergenic | 20.0% |
| !! | TTCAAACAAATTAAATCATG+AGG | - | chr4_4:49620804-49620823 | Msa0685480:intron | 20.0% |
| !!! | TTTTCAATCTTTTCTTATGT+TGG | + | chr4_4:49620854-49620873 | None:intergenic | 20.0% |
| !! | TATTCAATTCATTAGAAGTA+TGG | + | chr4_4:49621276-49621295 | None:intergenic | 20.0% |
| !!! | TTTTGTAATACAAAAAAGGA+AGG | - | chr4_4:49621645-49621664 | Msa0685480:intron | 20.0% |
| !!! | TTTTTTCATATAAGCTATTC+GGG | - | chr4_4:49622022-49622041 | Msa0685480:intron | 20.0% |
| !! | GTATTCTATTAAATTTGAAC+AGG | - | chr4_4:49622360-49622379 | Msa0685480:CDS | 20.0% |
| !!! | TGTGTATTTTAATTGTTTTG+TGG | - | chr4_4:49622484-49622503 | Msa0685480:intron | 20.0% |
| !!! | TCTAATTTTGATCAAACAAA+AGG | - | chr4_4:49622683-49622702 | Msa0685480:intron | 20.0% |
| !! | TTCTCAAATTATTATAGTGT+CGG | + | chr4_4:49623231-49623250 | None:intergenic | 20.0% |
| !! | ATTGAATGTAATCAATGTAT+CGG | - | chr4_4:49623260-49623279 | Msa0685480:intron | 20.0% |
| !! | AAACAACTCAAACATTATAT+AGG | - | chr4_4:49623841-49623860 | Msa0685480:intron | 20.0% |
| !! | TATATATATTTCCTTAAAGG+TGG | + | chr4_4:49624141-49624160 | None:intergenic | 20.0% |
| !!! | TATTCTTTTTAAGTTTTGTC+GGG | - | chr4_4:49624196-49624215 | Msa0685480:intron | 20.0% |
| !!! | ATGTCATTGTAAATTTTAGT+TGG | - | chr4_4:49624336-49624355 | Msa0685480:intron | 20.0% |
| !!! | CATATGCTATACATAAATTT+TGG | + | chr4_4:49625037-49625056 | None:intergenic | 20.0% |
| !! | CAAAATTTATGTATAGCATA+TGG | - | chr4_4:49625035-49625054 | Msa0685480:intron | 20.0% |
| !! | AAAAATTTGTAATGTTTCAG+GGG | + | chr4_4:49625122-49625141 | None:intergenic | 20.0% |
| !!! | ATAATTTGAATTTCAGGTAA+AGG | - | chr4_4:49625362-49625381 | Msa0685480:intron | 20.0% |
| !! | AGTTGTTACAAACTAAATAA+CGG | + | chr4_4:49625508-49625527 | None:intergenic | 20.0% |
| !!! | AATCATATTTGTTTTTGAAG+GGG | - | chr4_4:49625672-49625691 | Msa0685480:intron | 20.0% |
| ! | AAATGATCTTGAAAAGTCAA+AGG | + | chr4_4:49619064-49619083 | None:intergenic | 25.0% |
| ! | TTCTGTTAGTTGATTAACAT+TGG | - | chr4_4:49619098-49619117 | Msa0685480:CDS | 25.0% |
| ! | AAAGCAAAAGATTAAACCAA+TGG | + | chr4_4:49619282-49619301 | None:intergenic | 25.0% |
| ! | ATCAATCATTGAAAAGGATA+AGG | + | chr4_4:49619599-49619618 | None:intergenic | 25.0% |
| !! | TGGGAATAATTTTCAACTAA+TGG | - | chr4_4:49619744-49619763 | Msa0685480:intron | 25.0% |
| !! | ATGGTTACTTTGATCAATTA+CGG | - | chr4_4:49619763-49619782 | Msa0685480:intron | 25.0% |
| ! | AATTAGAACACCATCAAAAT+TGG | + | chr4_4:49619846-49619865 | None:intergenic | 25.0% |
| ! | TTACTGAATTTGTATGTTGT+TGG | - | chr4_4:49619891-49619910 | Msa0685480:intron | 25.0% |
| ! | CAAAATTTGACAAATGCTAA+TGG | - | chr4_4:49620027-49620046 | Msa0685480:intron | 25.0% |
| !! | TGTTTTCTATGAATACTTCT+AGG | - | chr4_4:49620347-49620366 | Msa0685480:intron | 25.0% |
| !! | AGGAATTCGATTTGAATTAT+GGG | + | chr4_4:49620589-49620608 | None:intergenic | 25.0% |
| !! | TTTTCTTATGTTGGAATTCA+TGG | + | chr4_4:49620845-49620864 | None:intergenic | 25.0% |
| !! | TTCAATGTCAAAGCAATTTT+TGG | + | chr4_4:49620908-49620927 | None:intergenic | 25.0% |
| !! | TTTTTCATATAAGCTATTCG+GGG | - | chr4_4:49622023-49622042 | Msa0685480:intron | 25.0% |
| ! | ATAACACTAAAGGTCATATT+TGG | + | chr4_4:49622214-49622233 | None:intergenic | 25.0% |
| ! | ATCAAACTCTATAACACTAA+AGG | + | chr4_4:49622224-49622243 | None:intergenic | 25.0% |
| ! | AAGAAATCAATGAACCTATA+AGG | + | chr4_4:49622460-49622479 | None:intergenic | 25.0% |
| !! | GTTTGAGATTTAGAAATTCT+TGG | - | chr4_4:49622506-49622525 | Msa0685480:intron | 25.0% |
| !! | ACCTATTTCCTCTTTTTAAT+AGG | - | chr4_4:49622721-49622740 | Msa0685480:intron | 25.0% |
| ! | ACCTATTAAAAAGAGGAAAT+AGG | + | chr4_4:49622725-49622744 | None:intergenic | 25.0% |
| ! | GAGAGAAATTTAAAGGTAAA+TGG | + | chr4_4:49622979-49622998 | None:intergenic | 25.0% |
| ! | TACCTTTAAATTTCTCTCAT+TGG | - | chr4_4:49622981-49623000 | Msa0685480:intron | 25.0% |
| ! | AACCAATGAGAGAAATTTAA+AGG | + | chr4_4:49622986-49623005 | None:intergenic | 25.0% |
| ! | AAAGACTGTAGAATAACTAT+CGG | + | chr4_4:49623012-49623031 | None:intergenic | 25.0% |
| ! | TTTCTCTACCTTTAACTATT+GGG | - | chr4_4:49623029-49623048 | Msa0685480:intron | 25.0% |
| ! | ATCGTGTTAACTTTCTTTAT+TGG | - | chr4_4:49623061-49623080 | Msa0685480:intron | 25.0% |
| ! | CACAAGTTATTTAATGTTGA+AGG | - | chr4_4:49623346-49623365 | Msa0685480:intron | 25.0% |
| ! | TTATCCTATTAGAAAGAATC+TGG | - | chr4_4:49623524-49623543 | Msa0685480:intron | 25.0% |
| ! | ATTTCTATACATTCATTCTG+AGG | - | chr4_4:49623571-49623590 | Msa0685480:intron | 25.0% |
| ! | ACTTCTAAATTAGTGTTAGT+TGG | - | chr4_4:49623713-49623732 | Msa0685480:intron | 25.0% |
| ! | AGCATTGTAACATTCAAATA+AGG | + | chr4_4:49623761-49623780 | None:intergenic | 25.0% |
| ! | TAAATGGTGTAAAACCTTAA+TGG | - | chr4_4:49624115-49624134 | Msa0685480:intron | 25.0% |
| !!! | ATTCTTTTTAAGTTTTGTCG+GGG | - | chr4_4:49624197-49624216 | Msa0685480:intron | 25.0% |
| ! | AATTTACAATGACATTGTGT+GGG | + | chr4_4:49624331-49624350 | None:intergenic | 25.0% |
| ! | AAATTTACAATGACATTGTG+TGG | + | chr4_4:49624332-49624351 | None:intergenic | 25.0% |
| !! | AACAAACAAACAAACCTTTT+TGG | + | chr4_4:49624444-49624463 | None:intergenic | 25.0% |
| ! | ACTAAATAAATACGCGTATT+TGG | - | chr4_4:49624494-49624513 | Msa0685480:intron | 25.0% |
| ! | GCTTAAAAAATAATGTACCT+GGG | + | chr4_4:49624799-49624818 | None:intergenic | 25.0% |
| ! | TGCTTAAAAAATAATGTACC+TGG | + | chr4_4:49624800-49624819 | None:intergenic | 25.0% |
| !!! | AGGTACATTATTTTTTAAGC+AGG | - | chr4_4:49624799-49624818 | Msa0685480:intron | 25.0% |
| ! | GCTTAAAAAATAATGTACCT+GGG | + | chr4_4:49624799-49624818 | None:intergenic | 25.0% |
| ! | TGCTTAAAAAATAATGTACC+TGG | + | chr4_4:49624800-49624819 | None:intergenic | 25.0% |
| !!! | AGGTACATTATTTTTTAAGC+AGG | - | chr4_4:49624799-49624818 | Msa0685480:intron | 25.0% |
| !! | TGTGATATTGAACTGTTTTA+AGG | - | chr4_4:49624938-49624957 | Msa0685480:intron | 25.0% |
| ! | ATATTTAAAAACAAGCAGAG+TGG | + | chr4_4:49624993-49625012 | None:intergenic | 25.0% |
| ! | ATATATGGTTAATAATAGGG+AGG | - | chr4_4:49625452-49625471 | Msa0685480:intron | 25.0% |
| ! | TGATGTTATAATTATGTAGG+AGG | - | chr4_4:49625702-49625721 | Msa0685480:CDS | 25.0% |
| TACAACATAGAGCATAAGAA+AGG | + | chr4_4:49619653-49619672 | None:intergenic | 30.0% | |
| TTTCTTATGCTCTATGTTGT+AGG | - | chr4_4:49619652-49619671 | Msa0685480:intron | 30.0% | |
| ! | TTTTAACAGTGTGAGAGAAT+TGG | - | chr4_4:49619688-49619707 | Msa0685480:intron | 30.0% |
| TTTAACAGTGTGAGAGAATT+GGG | - | chr4_4:49619689-49619708 | Msa0685480:intron | 30.0% | |
| !!! | ATTATGCAGGTTCTGAATTT+TGG | - | chr4_4:49619863-49619882 | Msa0685480:intron | 30.0% |
| TTATGTTGACAAATGCTAAG+AGG | - | chr4_4:49619941-49619960 | Msa0685480:CDS | 30.0% | |
| TATGTTGACAAATGCTAAGA+GGG | - | chr4_4:49619942-49619961 | Msa0685480:CDS | 30.0% | |
| AAATTCTAGACAATGTGTTG+TGG | + | chr4_4:49620056-49620075 | None:intergenic | 30.0% | |
| ACAATGTTGTTGAATCACTT+TGG | + | chr4_4:49620099-49620118 | None:intergenic | 30.0% | |
| !! | AAAGTTTTAATGCAAAGGCA+AGG | - | chr4_4:49620128-49620147 | Msa0685480:intron | 30.0% |
| TGAAGAACACATCTTTATCA+TGG | - | chr4_4:49620440-49620459 | Msa0685480:intron | 30.0% | |
| ! | TAAAAGGTTTAGAACAGATC+CGG | + | chr4_4:49620524-49620543 | None:intergenic | 30.0% |
| ! | GAGGAATTCGATTTGAATTA+TGG | + | chr4_4:49620590-49620609 | None:intergenic | 30.0% |
| TGTTTATGTGTCTTATGATG+AGG | + | chr4_4:49620609-49620628 | None:intergenic | 30.0% | |
| TACTTAGTTTCAGCTGTTAT+TGG | + | chr4_4:49620671-49620690 | None:intergenic | 30.0% | |
| TGAAGAACACATCTTTATCA+TGG | + | chr4_4:49620440-49620459 | None:intergenic | 30.0% | |
| ATTCTCAATGATAGTTATGC+AGG | + | chr4_4:49621315-49621334 | None:intergenic | 30.0% | |
| TATATATCACTGGATGACTT+TGG | + | chr4_4:49621374-49621393 | None:intergenic | 30.0% | |
| !!! | TTTATGGGTATTGGGTTTTA+TGG | - | chr4_4:49621598-49621617 | Msa0685480:intron | 30.0% |
| ! | CATGTCAAAATCTAAAGCAA+AGG | - | chr4_4:49621672-49621691 | Msa0685480:intron | 30.0% |
| AAAGCAAAGGATTAAACCAA+TGG | - | chr4_4:49621685-49621704 | Msa0685480:intron | 30.0% | |
| TTTCCAGCAGTATACTTAAA+GGG | + | chr4_4:49621768-49621787 | None:intergenic | 30.0% | |
| ! | TTTTCCAGCAGTATACTTAA+AGG | + | chr4_4:49621769-49621788 | None:intergenic | 30.0% |
| TTAAGTATACTGCTGGAAAA+TGG | - | chr4_4:49621769-49621788 | Msa0685480:intron | 30.0% | |
| TATAATGCCTTTGAGTAAGA+GGG | + | chr4_4:49621828-49621847 | None:intergenic | 30.0% | |
| ATATAATGCCTTTGAGTAAG+AGG | + | chr4_4:49621829-49621848 | None:intergenic | 30.0% | |
| !! | TTTTAGCTACATGCTATGTT+TGG | - | chr4_4:49621915-49621934 | Msa0685480:intron | 30.0% |
| GCTTATACATAAGCACTTAT+AGG | + | chr4_4:49621966-49621985 | None:intergenic | 30.0% | |
| ! | TTTTCATATAAGCTATTCGG+GGG | - | chr4_4:49622024-49622043 | Msa0685480:intron | 30.0% |
| TGGTTACATCAAACTTCTTT+CGG | - | chr4_4:49622399-49622418 | Msa0685480:intron | 30.0% | |
| TATGTCAATCAGAAGAAGTT+TGG | - | chr4_4:49622424-49622443 | Msa0685480:intron | 30.0% | |
| GATTTAGAAATTCTTGGACT+TGG | - | chr4_4:49622512-49622531 | Msa0685480:intron | 30.0% | |
| AAGGAACTTATCTTCTAACA+GGG | - | chr4_4:49622853-49622872 | Msa0685480:intron | 30.0% | |
| CTTTAGACTTGATATATGAC+AGG | + | chr4_4:49622951-49622970 | None:intergenic | 30.0% | |
| CTTTCTCTACCTTTAACTAT+TGG | - | chr4_4:49623028-49623047 | Msa0685480:intron | 30.0% | |
| GAAGATTACCCAATAGTTAA+AGG | + | chr4_4:49623040-49623059 | None:intergenic | 30.0% | |
| ! | TCTTTATTGGTGCTTTAACA+TGG | - | chr4_4:49623074-49623093 | Msa0685480:intron | 30.0% |
| ATTACACTGATAGAACAACT+AGG | + | chr4_4:49623389-49623408 | None:intergenic | 30.0% | |
| ATCAGTGTAATGTATTGAGT+AGG | - | chr4_4:49623398-49623417 | Msa0685480:intron | 30.0% | |
| TCAGTGTAATGTATTGAGTA+GGG | - | chr4_4:49623399-49623418 | Msa0685480:intron | 30.0% | |
| CATGTTATATTGTCATACCA+GGG | - | chr4_4:49623495-49623514 | Msa0685480:intron | 30.0% | |
| ATGTTATATTGTCATACCAG+GGG | - | chr4_4:49623496-49623515 | Msa0685480:intron | 30.0% | |
| TGTTATTAGTTATTGCAGTC+TGG | - | chr4_4:49623796-49623815 | Msa0685480:intron | 30.0% | |
| GCTGCAATAGAGAAAAAAAA+AGG | + | chr4_4:49623922-49623941 | None:intergenic | 30.0% | |
| GCAAACAATAAAAAAGGCAA+AGG | + | chr4_4:49624014-49624033 | None:intergenic | 30.0% | |
| GCACATGCAAACAATAAAAA+AGG | + | chr4_4:49624020-49624039 | None:intergenic | 30.0% | |
| ATGTGCATGTAAAACCTTAA+TGG | - | chr4_4:49624034-49624053 | Msa0685480:intron | 30.0% | |
| TCATATGAGCGATAGATAAA+TGG | - | chr4_4:49624099-49624118 | Msa0685480:intron | 30.0% | |
| ATTTACAATGACATTGTGTG+GGG | + | chr4_4:49624330-49624349 | None:intergenic | 30.0% | |
| TCTAATTGTCTTGATATTGC+AGG | - | chr4_4:49624379-49624398 | Msa0685480:intron | 30.0% | |
| CTAATTGTCTTGATATTGCA+GGG | - | chr4_4:49624380-49624399 | Msa0685480:intron | 30.0% | |
| !!! | AAACAAACCTTTTTGGCTTT+CGG | + | chr4_4:49624437-49624456 | None:intergenic | 30.0% |
| GGACAGTTTAATGATATGTT+TGG | + | chr4_4:49625016-49625035 | None:intergenic | 30.0% | |
| ATGTATAGCATATGGACATA+TGG | - | chr4_4:49625043-49625062 | Msa0685480:intron | 30.0% | |
| CTGAAACCAATAAAGTATGT+TGG | - | chr4_4:49625202-49625221 | Msa0685480:intron | 30.0% | |
| TCAATGCCAACATACTTTAT+TGG | + | chr4_4:49625211-49625230 | None:intergenic | 30.0% | |
| ! | TCTCATTTTGTGTAAATCTC+AGG | - | chr4_4:49625544-49625563 | Msa0685480:intron | 30.0% |
| !! | AAAAGAAGCTTTTGAAGAAG+CGG | - | chr4_4:49625571-49625590 | Msa0685480:intron | 30.0% |
| TTCTTCGAAGAAACATTCCA+AGG | - | chr4_4:49618996-49619015 | Msa0685480:intron | 35.0% | |
| AGAGATGATGAAGTTGAAGA+TGG | + | chr4_4:49619031-49619050 | None:intergenic | 35.0% | |
| GATCTTGAAAAGTCAAAGGT+AGG | + | chr4_4:49619060-49619079 | None:intergenic | 35.0% | |
| CTTTAGTCAATATCCACCAT+TGG | - | chr4_4:49619263-49619282 | Msa0685480:CDS | 35.0% | |
| GCAAAAGATTAAACCAATGG+TGG | + | chr4_4:49619279-49619298 | None:intergenic | 35.0% | |
| !!! | TTCATGGGTATTGGGTTTTA+TGG | + | chr4_4:49619369-49619388 | None:intergenic | 35.0% |
| TTTGACGGTGTGAAAGAATT+GGG | - | chr4_4:49619725-49619744 | Msa0685480:intron | 35.0% | |
| ! | GTTACTTTGATCAATTACGG+TGG | - | chr4_4:49619766-49619785 | Msa0685480:intron | 35.0% |
| ! | TGATGGTGTTCTAATTATGC+AGG | - | chr4_4:49619850-49619869 | Msa0685480:intron | 35.0% |
| CAACATAATACACGTATGAG+AGG | + | chr4_4:49619929-49619948 | None:intergenic | 35.0% | |
| TTGCACAGTTTAGTGTTCAA+AGG | + | chr4_4:49620010-49620029 | None:intergenic | 35.0% | |
| AAGCATTAAATTCTGCACAG+TGG | + | chr4_4:49620170-49620189 | None:intergenic | 35.0% | |
| GTGTTCTTCACTAGATCTAA+TGG | + | chr4_4:49621193-49621212 | None:intergenic | 35.0% | |
| GTTTACTCAGTCAGTGTAAA+AGG | + | chr4_4:49620540-49620559 | None:intergenic | 35.0% | |
| TTGATTCAATCACAGAGGAT+TGG | + | chr4_4:49620736-49620755 | None:intergenic | 35.0% | |
| GTGTTCTTCACTAGATCTAA+TGG | - | chr4_4:49621193-49621212 | Msa0685480:CDS | 35.0% | |
| ACTGATTGGAGCTGTAATTT+AGG | + | chr4_4:49621449-49621468 | None:intergenic | 35.0% | |
| CTTTAGTCAATATCCACCAT+TGG | + | chr4_4:49619263-49619282 | None:intergenic | 35.0% | |
| TTCCAGCAGTATACTTAAAG+GGG | + | chr4_4:49621767-49621786 | None:intergenic | 35.0% | |
| !!! | TAAGCACTCGTGAGATTTTT+TGG | + | chr4_4:49622162-49622181 | None:intergenic | 35.0% |
| ! | TAGTGTTTTACGATTCTTGC+AGG | - | chr4_4:49622250-49622269 | Msa0685480:intron | 35.0% |
| ! | AATAGAATACTGAAGCACCA+GGG | + | chr4_4:49622350-49622369 | None:intergenic | 35.0% |
| ! | TAATAGAATACTGAAGCACC+AGG | + | chr4_4:49622351-49622370 | None:intergenic | 35.0% |
| TTTGAACAGGATATTGAGTG+TGG | - | chr4_4:49622373-49622392 | Msa0685480:CDS | 35.0% | |
| GGTTACATCAAACTTCTTTC+GGG | - | chr4_4:49622400-49622419 | Msa0685480:intron | 35.0% | |
| GGTGGGGAAAAAAATAATAG+AGG | + | chr4_4:49622620-49622639 | None:intergenic | 35.0% | |
| TCACATGACAAGATCATTGA+GGG | + | chr4_4:49622647-49622666 | None:intergenic | 35.0% | |
| ! | AACAAAAGGCTATTCTGAAG+AGG | - | chr4_4:49622697-49622716 | Msa0685480:intron | 35.0% |
| GTATGTTACGTTAGTAGTCA+TGG | - | chr4_4:49622759-49622778 | Msa0685480:intron | 35.0% | |
| CAAGGAACTTATCTTCTAAC+AGG | - | chr4_4:49622852-49622871 | Msa0685480:intron | 35.0% | |
| !! | TCAACTTTGAAGCATTGACA+CGG | - | chr4_4:49623176-49623195 | Msa0685480:intron | 35.0% |
| GCTTAATGCAGTTTGATGTT+TGG | - | chr4_4:49623438-49623457 | Msa0685480:intron | 35.0% | |
| CCTGGTATGACAATATAACA+TGG | + | chr4_4:49623497-49623516 | None:intergenic | 35.0% | |
| CCATGTTATATTGTCATACC+AGG | - | chr4_4:49623494-49623513 | Msa0685480:intron | 35.0% | |
| CACTCCAGATTCTTTCTAAT+AGG | + | chr4_4:49623531-49623550 | None:intergenic | 35.0% | |
| ATTATCGACAAGGACACTAT+AGG | + | chr4_4:49623607-49623626 | None:intergenic | 35.0% | |
| GATAATCGAGAAAGAGATTC+TGG | - | chr4_4:49623621-49623640 | Msa0685480:intron | 35.0% | |
| ! | TTGACATCCTTGATTTTCCT+TGG | + | chr4_4:49623678-49623697 | None:intergenic | 35.0% |
| CTAAATTAGTGTTAGTTGGC+TGG | - | chr4_4:49623717-49623736 | Msa0685480:intron | 35.0% | |
| TACCACGGTAAAATTCTTAC+AGG | + | chr4_4:49624063-49624082 | None:intergenic | 35.0% | |
| ! | GTAAGAATTTTACCGTGGTA+TGG | - | chr4_4:49624063-49624082 | Msa0685480:intron | 35.0% |
| CATGAAAGTTATCCATACCA+CGG | + | chr4_4:49624078-49624097 | None:intergenic | 35.0% | |
| TAATGAAAGTGACTCTAACC+AGG | + | chr4_4:49624174-49624193 | None:intergenic | 35.0% | |
| !! | ATGATGAAGATGATGGACTA+TGG | - | chr4_4:49624587-49624606 | Msa0685480:intron | 35.0% |
| !! | GTATGCTGGATTAGGAATTT+TGG | + | chr4_4:49624620-49624639 | None:intergenic | 35.0% |
| GAATTGACATTCATATCCCT+TGG | - | chr4_4:49624689-49624708 | Msa0685480:intron | 35.0% | |
| TATCCCTTGGTTTCTAATTG+TGG | - | chr4_4:49624702-49624721 | Msa0685480:intron | 35.0% | |
| TTGCCACAATTAGAAACCAA+GGG | + | chr4_4:49624708-49624727 | None:intergenic | 35.0% | |
| TTTGCCACAATTAGAAACCA+AGG | + | chr4_4:49624709-49624728 | None:intergenic | 35.0% | |
| AATAGATTTGGAAGACTCCA+TGG | - | chr4_4:49624846-49624865 | Msa0685480:intron | 35.0% | |
| TTTGTTTCCTGCAGAATTTG+AGG | - | chr4_4:49625159-49625178 | Msa0685480:intron | 35.0% | |
| ! | TTTGAATTTCAGGTAAAGGC+TGG | - | chr4_4:49625366-49625385 | Msa0685480:intron | 35.0% |
| GCAAGTTGTGGAAGAATATA+TGG | - | chr4_4:49625437-49625456 | Msa0685480:intron | 35.0% | |
| ATGGTTAATAATAGGGAGGT+AGG | - | chr4_4:49625456-49625475 | Msa0685480:intron | 35.0% | |
| AAGAAGCGGAAAAAGAAAGA+AGG | - | chr4_4:49625585-49625604 | Msa0685480:intron | 35.0% | |
| AGAAGCGGAAAAAGAAAGAA+GGG | - | chr4_4:49625586-49625605 | Msa0685480:intron | 35.0% | |
| ! | AGAATAGTGCTGAAGCATTA+AGG | + | chr4_4:49625640-49625659 | None:intergenic | 35.0% |
| TTCGAAGAAGACTTCAGCAA+AGG | + | chr4_4:49618985-49619004 | None:intergenic | 40.0% | |
| GAAGATGGTTTCAGTTACCT+TGG | + | chr4_4:49619016-49619035 | None:intergenic | 40.0% | |
| !! | GGGTTTTGTCTGATTGGAAA+AGG | - | chr4_4:49619170-49619189 | Msa0685480:intron | 40.0% |
| TCTGATTGGAAAAGGAGTGA+AGG | - | chr4_4:49619178-49619197 | Msa0685480:intron | 40.0% | |
| AAAAGGAGTGAAGGAAAAGC+AGG | - | chr4_4:49619187-49619206 | Msa0685480:intron | 40.0% | |
| GAAAAGCAGGTACCTTTAAG+TGG | - | chr4_4:49619200-49619219 | Msa0685480:intron | 40.0% | |
| TCTCAAAAGTCACTGAATCC+GGG | + | chr4_4:49621740-49621759 | None:intergenic | 40.0% | |
| CTCTCAAAAGTCACTGAATC+CGG | + | chr4_4:49621739-49621758 | None:intergenic | 40.0% | |
| !! | GGATTCAGTGACTTTTGAGA+GGG | - | chr4_4:49619227-49619246 | Msa0685480:intron | 40.0% |
| GTTGTGACTTCATGGGTATT+GGG | + | chr4_4:49619377-49619396 | None:intergenic | 40.0% | |
| TCCTGTCACAGTTGTTTACT+GGG | - | chr4_4:49619538-49619557 | Msa0685480:intron | 40.0% | |
| GGAACACCTTTGTACTTTGA+CGG | - | chr4_4:49619710-49619729 | Msa0685480:intron | 40.0% | |
| TTCACACCGTCAAAGTACAA+AGG | + | chr4_4:49619719-49619738 | None:intergenic | 40.0% | |
| CTTTGACGGTGTGAAAGAAT+TGG | - | chr4_4:49619724-49619743 | Msa0685480:intron | 40.0% | |
| TTGATCAATTACGGTGGTTC+TGG | - | chr4_4:49619772-49619791 | Msa0685480:intron | 40.0% | |
| !! | AATTACGGTGGTTCTGGAAT+TGG | - | chr4_4:49619778-49619797 | Msa0685480:intron | 40.0% |
| CCAGAATCACATATGCATAG+TGG | + | chr4_4:49619974-49619993 | None:intergenic | 40.0% | |
| CCACTATGCATATGTGATTC+TGG | - | chr4_4:49619971-49619990 | Msa0685480:intron | 40.0% | |
| GAAAAAAGCTTTCCCATGGT+GGG | + | chr4_4:49621219-49621238 | None:intergenic | 40.0% | |
| AGAAAAAAGCTTTCCCATGG+TGG | + | chr4_4:49621218-49621237 | None:intergenic | 40.0% | |
| !!! | ACCATGGGAAAGCTTTTTTC+TGG | - | chr4_4:49620404-49620423 | Msa0685480:intron | 40.0% |
| TACAGGCTACTAAAGTGAGA+TGG | + | chr4_4:49620778-49620797 | None:intergenic | 40.0% | |
| TCTTACACTTTGGACTTCGA+TGG | + | chr4_4:49621019-49621038 | None:intergenic | 40.0% | |
| ATCGAAGTCCAAAGTGTAAG+AGG | - | chr4_4:49621018-49621037 | Msa0685480:CDS | 40.0% | |
| TCGAAGTCCAAAGTGTAAGA+GGG | - | chr4_4:49621019-49621038 | Msa0685480:CDS | 40.0% | |
| !!! | ACCATGGGAAAGCTTTTTTC+TGG | + | chr4_4:49620404-49620423 | None:intergenic | 40.0% |
| AGAAAAAAGCTTTCCCATGG+TGG | - | chr4_4:49621218-49621237 | Msa0685480:CDS | 40.0% | |
| GAAAAAAGCTTTCCCATGGT+GGG | - | chr4_4:49621219-49621238 | Msa0685480:CDS | 40.0% | |
| AGGTTTGTCAAAGGGTGATA+CGG | - | chr4_4:49621567-49621586 | Msa0685480:intron | 40.0% | |
| !! | GTTGTGGCTTTATGGGTATT+GGG | - | chr4_4:49621590-49621609 | Msa0685480:intron | 40.0% |
| GCAAAGGATTAAACCAATGG+TGG | - | chr4_4:49621688-49621707 | Msa0685480:intron | 40.0% | |
| !! | GGATTCAGTGACTTTTGAGA+GGG | + | chr4_4:49619227-49619246 | None:intergenic | 40.0% |
| CTCTCAAAAGTCACTGAATC+CGG | - | chr4_4:49621739-49621758 | Msa0685480:intron | 40.0% | |
| CAGTATACTTAAAGGGGATC+CGG | + | chr4_4:49621761-49621780 | None:intergenic | 40.0% | |
| ATCCCCTTTAAGTATACTGC+TGG | - | chr4_4:49621762-49621781 | Msa0685480:intron | 40.0% | |
| TGCAGATATGGCAAAATGCT+TGG | + | chr4_4:49622296-49622315 | None:intergenic | 40.0% | |
| CTCTGGTATCTTTGCAGATA+TGG | + | chr4_4:49622308-49622327 | None:intergenic | 40.0% | |
| CTGTTCTTATTGGTCAACTC+TGG | + | chr4_4:49622325-49622344 | None:intergenic | 40.0% | |
| GTCAATCAGAAGAAGTTTGG+CGG | - | chr4_4:49622427-49622446 | Msa0685480:intron | 40.0% | |
| TCGTCATCAATGATGAGCAA+TGG | + | chr4_4:49622557-49622576 | None:intergenic | 40.0% | |
| CACATGACAAGATCATTGAG+GGG | + | chr4_4:49622646-49622665 | None:intergenic | 40.0% | |
| CTCACATGACAAGATCATTG+AGG | + | chr4_4:49622648-49622667 | None:intergenic | 40.0% | |
| GTAGTTCAAGTAGTTGAGCT+GGG | + | chr4_4:49622822-49622841 | None:intergenic | 40.0% | |
| CTTATCTTCTAACAGGGTCA+AGG | - | chr4_4:49622859-49622878 | Msa0685480:intron | 40.0% | |
| ! | CAATCACTCCTTTTCCCATT+AGG | - | chr4_4:49622888-49622907 | Msa0685480:intron | 40.0% |
| ! | ATTGGTGCTTTAACATGGTC+AGG | - | chr4_4:49623079-49623098 | Msa0685480:intron | 40.0% |
| ATTTCAGCAGTAGCAAAGTG+TGG | + | chr4_4:49623143-49623162 | None:intergenic | 40.0% | |
| !! | TAATCAATGTATCGGTGTCG+TGG | - | chr4_4:49623268-49623287 | Msa0685480:intron | 40.0% |
| ATAGAACAACTAGGACAGTG+AGG | + | chr4_4:49623380-49623399 | None:intergenic | 40.0% | |
| ATTGAGTAGGGTGAACTGAT+TGG | - | chr4_4:49623411-49623430 | Msa0685480:intron | 40.0% | |
| ATGCAGTTTGATGTTTGGAC+CGG | - | chr4_4:49623443-49623462 | Msa0685480:intron | 40.0% | |
| GTTTGTGTACCACATAGATC+CGG | + | chr4_4:49623465-49623484 | None:intergenic | 40.0% | |
| TAATAGGATAATTCTGCCCC+TGG | + | chr4_4:49623515-49623534 | None:intergenic | 40.0% | |
| CTCTTTCTCGATTATCGACA+AGG | + | chr4_4:49623617-49623636 | None:intergenic | 40.0% | |
| TGGTAGCATGTACACAGATT+GGG | - | chr4_4:49623641-49623660 | Msa0685480:intron | 40.0% | |
| ! | ACATCCTTGATTTTCCTTGG+AGG | + | chr4_4:49623675-49623694 | None:intergenic | 40.0% |
| CAAGGATGTCAAAGCGAAAA+AGG | - | chr4_4:49623686-49623705 | Msa0685480:intron | 40.0% | |
| ! | TATTGCAGTCTGGAACTCAA+AGG | - | chr4_4:49623806-49623825 | Msa0685480:intron | 40.0% |
| ATTCTTACAGGTGGCCATTA+AGG | + | chr4_4:49624051-49624070 | None:intergenic | 40.0% | |
| CACGGTAAAATTCTTACAGG+TGG | + | chr4_4:49624060-49624079 | None:intergenic | 40.0% | |
| ! | CACCTGTAAGAATTTTACCG+TGG | - | chr4_4:49624058-49624077 | Msa0685480:intron | 40.0% |
| AACCTTAATGGCCACCTTTA+AGG | - | chr4_4:49624127-49624146 | Msa0685480:intron | 40.0% | |
| TTCCTTAAAGGTGGCCATTA+AGG | + | chr4_4:49624132-49624151 | None:intergenic | 40.0% | |
| ! | GTTTTGTCGGGGATCATAAA+TGG | - | chr4_4:49624208-49624227 | Msa0685480:intron | 40.0% |
| GGGATATGATTCAATTCCAG+CGG | - | chr4_4:49624400-49624419 | Msa0685480:intron | 40.0% | |
| !!! | AACCTTTTTGGCTTTCGGAT+CGG | + | chr4_4:49624432-49624451 | None:intergenic | 40.0% |
| TAAATACGCGTATTTGGCAC+AGG | - | chr4_4:49624500-49624519 | Msa0685480:intron | 40.0% | |
| !! | GCTGGATTAGGAATTTTGGA+AGG | + | chr4_4:49624616-49624635 | None:intergenic | 40.0% |
| ATTCCTAATCCAGCATACAG+AGG | - | chr4_4:49624622-49624641 | Msa0685480:intron | 40.0% | |
| TGAAGAACCTTTCGTTTCCA+TGG | + | chr4_4:49624649-49624668 | None:intergenic | 40.0% | |
| AATCAAGAACCCCAACTACA+AGG | - | chr4_4:49624745-49624764 | Msa0685480:intron | 40.0% | |
| ATCAAGAACCCCAACTACAA+GGG | - | chr4_4:49624746-49624765 | Msa0685480:intron | 40.0% | |
| TTCCACTTTCCCTTGTAGTT+GGG | + | chr4_4:49624758-49624777 | None:intergenic | 40.0% | |
| GGTTTCAGCACATAAAGATC+AGG | + | chr4_4:49625190-49625209 | None:intergenic | 40.0% | |
| ! | AGTATGTTGGCATTGAAGTG+TGG | - | chr4_4:49625215-49625234 | Msa0685480:intron | 40.0% |
| ! | CAACTTGCTTTGCATACTGT+GGG | + | chr4_4:49625425-49625444 | None:intergenic | 40.0% |
| ! | ACAACTTGCTTTGCATACTG+TGG | + | chr4_4:49625426-49625445 | None:intergenic | 40.0% |
| ACAGTATGCAAAGCAAGTTG+TGG | - | chr4_4:49625425-49625444 | Msa0685480:intron | 40.0% | |
| !! | GAAGAAGAGGTAATGGATCA+AGG | - | chr4_4:49625614-49625633 | Msa0685480:intron | 40.0% |
| TAATTATGTAGGAGGCTCGA+AGG | - | chr4_4:49625710-49625729 | Msa0685480:CDS | 40.0% | |
| AATTATGTAGGAGGCTCGAA+GGG | - | chr4_4:49625711-49625730 | Msa0685480:CDS | 40.0% | |
| GCAGTAGATATGGAGATAAG+AGG | - | chr4_4:49625770-49625789 | Msa0685480:CDS | 40.0% | |
| !! | GTCGTTGGGTTTTGTCTGAT+TGG | - | chr4_4:49619164-49619183 | Msa0685480:intron | 45.0% |
| ! | CGGATTCAGTGACTTTTGAG+AGG | - | chr4_4:49619226-49619245 | Msa0685480:intron | 45.0% |
| GGTTGTGACTTCATGGGTAT+TGG | + | chr4_4:49619378-49619397 | None:intergenic | 45.0% | |
| ! | GATACGGGTTGTGACTTCAT+GGG | + | chr4_4:49619384-49619403 | None:intergenic | 45.0% |
| ! | TGATACGGGTTGTGACTTCA+TGG | + | chr4_4:49619385-49619404 | None:intergenic | 45.0% |
| AAACAACTGTGACAGGACGA+CGG | + | chr4_4:49619535-49619554 | None:intergenic | 45.0% | |
| GTCCTGTCACAGTTGTTTAC+TGG | - | chr4_4:49619537-49619556 | Msa0685480:intron | 45.0% | |
| ACCCAGTAAACAACTGTGAC+AGG | + | chr4_4:49619542-49619561 | None:intergenic | 45.0% | |
| !! | GGAAAAAACTAGCCTTTCCC+AGG | + | chr4_4:49621240-49621259 | None:intergenic | 45.0% |
| !!! | AGGCTAGTTTTTTCCCACCA+TGG | - | chr4_4:49620388-49620407 | Msa0685480:intron | 45.0% |
| !!! | GGCTAGTTTTTTCCCACCAT+GGG | - | chr4_4:49620389-49620408 | Msa0685480:intron | 45.0% |
| GCCAGAAAAAAGCTTTCCCA+TGG | + | chr4_4:49621215-49621234 | None:intergenic | 45.0% | |
| ! | TGGGGTTGATTCAATCACAG+AGG | + | chr4_4:49620741-49620760 | None:intergenic | 45.0% |
| TCAACCCCATCAAACAAACC+AGG | - | chr4_4:49620752-49620771 | Msa0685480:CDS | 45.0% | |
| !! | ATGGCCTGGTTTGTTTGATG+GGG | + | chr4_4:49620759-49620778 | None:intergenic | 45.0% |
| !! | GATGGCCTGGTTTGTTTGAT+GGG | + | chr4_4:49620760-49620779 | None:intergenic | 45.0% |
| !! | AGATGGCCTGGTTTGTTTGA+TGG | + | chr4_4:49620761-49620780 | None:intergenic | 45.0% |
| AAGTCCAAAGTGTAAGAGGG+AGG | - | chr4_4:49621022-49621041 | Msa0685480:CDS | 45.0% | |
| ! | ACGGAGGTTTAGAACAGATC+CGG | - | chr4_4:49621099-49621118 | Msa0685480:CDS | 45.0% |
| GCCAGAAAAAAGCTTTCCCA+TGG | - | chr4_4:49621215-49621234 | Msa0685480:CDS | 45.0% | |
| !!! | GGCTAGTTTTTTCCCACCAT+GGG | + | chr4_4:49620389-49620408 | None:intergenic | 45.0% |
| !!! | AGGCTAGTTTTTTCCCACCA+TGG | + | chr4_4:49620388-49620407 | None:intergenic | 45.0% |
| !! | GGAAAAAACTAGCCTTTCCC+AGG | - | chr4_4:49621240-49621259 | Msa0685480:CDS | 45.0% |
| CCTTGCAGCATTACACTGAT+TGG | + | chr4_4:49621463-49621482 | None:intergenic | 45.0% | |
| CCAATCAGTGTAATGCTGCA+AGG | - | chr4_4:49621460-49621479 | Msa0685480:intron | 45.0% | |
| TGAAGGTGGAGGTTTGTCAA+AGG | - | chr4_4:49621558-49621577 | Msa0685480:intron | 45.0% | |
| GAAGGTGGAGGTTTGTCAAA+GGG | - | chr4_4:49621559-49621578 | Msa0685480:intron | 45.0% | |
| GGTTTGTCAAAGGGTGATAC+GGG | - | chr4_4:49621568-49621587 | Msa0685480:intron | 45.0% | |
| ! | TGATACGGGTTGTGGCTTTA+TGG | - | chr4_4:49621582-49621601 | Msa0685480:intron | 45.0% |
| !! | GATACGGGTTGTGGCTTTAT+GGG | - | chr4_4:49621583-49621602 | Msa0685480:intron | 45.0% |
| !! | GGTTGTGGCTTTATGGGTAT+TGG | - | chr4_4:49621589-49621608 | Msa0685480:intron | 45.0% |
| ! | CGGATTCAGTGACTTTTGAG+AGG | + | chr4_4:49619226-49619245 | None:intergenic | 45.0% |
| !! | AGGAAGGTACCTTTGTCATC+AGG | + | chr4_4:49621804-49621823 | None:intergenic | 45.0% |
| CTTTGAGTAAGAGGGTAGGA+AGG | + | chr4_4:49621820-49621839 | None:intergenic | 45.0% | |
| CTTCCTACCCTCTTACTCAA+AGG | - | chr4_4:49621818-49621837 | Msa0685480:intron | 45.0% | |
| ATGCCTTTGAGTAAGAGGGT+AGG | + | chr4_4:49621824-49621843 | None:intergenic | 45.0% | |
| AAGCTATTCGGGGGAACTTA+TGG | - | chr4_4:49622033-49622052 | Msa0685480:intron | 45.0% | |
| GACCAATAAGAACAGAACCC+TGG | - | chr4_4:49622330-49622349 | Msa0685480:CDS | 45.0% | |
| CACCAGGGTTCTGTTCTTAT+TGG | + | chr4_4:49622335-49622354 | None:intergenic | 45.0% | |
| GAACAGGATATTGAGTGTGG+TGG | - | chr4_4:49622376-49622395 | Msa0685480:intron | 45.0% | |
| TTGGCGGTGATACTCCTTAT+AGG | - | chr4_4:49622443-49622462 | Msa0685480:intron | 45.0% | |
| AGATCATTGAGGGGAATGGT+GGG | + | chr4_4:49622637-49622656 | None:intergenic | 45.0% | |
| AAGATCATTGAGGGGAATGG+TGG | + | chr4_4:49622638-49622657 | None:intergenic | 45.0% | |
| GACAAGATCATTGAGGGGAA+TGG | + | chr4_4:49622641-49622660 | None:intergenic | 45.0% | |
| CACGTAAGAGTTGAAGATGG+AGG | + | chr4_4:49622798-49622817 | None:intergenic | 45.0% | |
| GGACACGTAAGAGTTGAAGA+TGG | + | chr4_4:49622801-49622820 | None:intergenic | 45.0% | |
| CGTAGTTCAAGTAGTTGAGC+TGG | + | chr4_4:49622823-49622842 | None:intergenic | 45.0% | |
| CTACTTGAACTACGTGCTGA+AGG | - | chr4_4:49622829-49622848 | Msa0685480:intron | 45.0% | |
| ! | TCACTCCTTTTCCCATTAGG+TGG | - | chr4_4:49622891-49622910 | Msa0685480:intron | 45.0% |
| !! | TGCAATGTTGGTGTCATGTC+CGG | + | chr4_4:49623205-49623224 | None:intergenic | 45.0% |
| ATGTTTGGACCGGATCTATG+TGG | - | chr4_4:49623453-49623472 | Msa0685480:intron | 45.0% | |
| ATCGACAAGGACACTATAGG+AGG | + | chr4_4:49623604-49623623 | None:intergenic | 45.0% | |
| CTGGTAGCATGTACACAGAT+TGG | - | chr4_4:49623640-49623659 | Msa0685480:intron | 45.0% | |
| ! | CCTTGATTTTCCTTGGAGGA+AGG | + | chr4_4:49623671-49623690 | None:intergenic | 45.0% |
| CCTTCCTCCAAGGAAAATCA+AGG | - | chr4_4:49623668-49623687 | Msa0685480:intron | 45.0% | |
| TCTATTGCAGCCAGCAGATT+GGG | - | chr4_4:49623931-49623950 | Msa0685480:intron | 45.0% | |
| TCTCTATCATCCCAATCTGC+TGG | + | chr4_4:49623944-49623963 | None:intergenic | 45.0% | |
| ! | CCTCTGGTTTGACATCATCA+GGG | + | chr4_4:49623979-49623998 | None:intergenic | 45.0% |
| ! | ACCTCTGGTTTGACATCATC+AGG | + | chr4_4:49623980-49623999 | None:intergenic | 45.0% |
| AAGGTGACAACAAGTACCTC+TGG | + | chr4_4:49623995-49624014 | None:intergenic | 45.0% | |
| !!! | ACCTTTTTGGCTTTCGGATC+GGG | + | chr4_4:49624431-49624450 | None:intergenic | 45.0% |
| GACTGGGATGATGAAGATGA+TGG | - | chr4_4:49624580-49624599 | Msa0685480:intron | 45.0% | |
| TCCACTTTCCCTTGTAGTTG+GGG | + | chr4_4:49624757-49624776 | None:intergenic | 45.0% | |
| CTTCCACTTTCCCTTGTAGT+TGG | + | chr4_4:49624759-49624778 | None:intergenic | 45.0% | |
| ! | ACTCCATGGATTGATAACCC+AGG | - | chr4_4:49624779-49624798 | Msa0685480:intron | 45.0% |
| GTACCTGGGTTATCAATCCA+TGG | + | chr4_4:49624785-49624804 | None:intergenic | 45.0% | |
| ! | ACTCCATGGATTGATAACCC+AGG | - | chr4_4:49624779-49624798 | Msa0685480:intron | 45.0% |
| GTACCTGGGTTATCAATCCA+TGG | + | chr4_4:49624785-49624804 | None:intergenic | 45.0% | |
| TCAGCTTCTTTGAGCTGTGA+TGG | - | chr4_4:49625071-49625090 | Msa0685480:intron | 45.0% | |
| GGATCATCCTCAAATTCTGC+AGG | + | chr4_4:49625169-49625188 | None:intergenic | 45.0% | |
| CGGAAAAAGAAAGAAGGGCT+CGG | - | chr4_4:49625591-49625610 | Msa0685480:intron | 45.0% | |
| GGAAAAAGAAAGAAGGGCTC+GGG | - | chr4_4:49625592-49625611 | Msa0685480:intron | 45.0% | |
| !!! | TCTTTTTTTTTTTTTTTTAT+TGG | + | chr4_4:49619133-49619152 | None:intergenic | 5.0% |
| !! | ATAAAAAAAAAAAAAAAAGA+TGG | - | chr4_4:49619133-49619152 | Msa0685480:CDS | 5.0% |
| !! | TAAAAAAAAAAAAAAAAGAT+GGG | - | chr4_4:49619134-49619153 | Msa0685480:CDS | 5.0% |
| AAGATGGGTGGAAGAGTCGT+TGG | - | chr4_4:49619149-49619168 | Msa0685480:intron | 50.0% | |
| AGATGGGTGGAAGAGTCGTT+GGG | - | chr4_4:49619150-49619169 | Msa0685480:intron | 50.0% | |
| CAGGTACCTTTAAGTGGACC+CGG | - | chr4_4:49619206-49619225 | Msa0685480:intron | 50.0% | |
| CTGAATCCGGGTCCACTTAA+AGG | + | chr4_4:49619215-49619234 | None:intergenic | 50.0% | |
| GTTTGCCAAAGGGGTGATAC+GGG | + | chr4_4:49619399-49619418 | None:intergenic | 50.0% | |
| GGTTTGCCAAAGGGGTGATA+CGG | + | chr4_4:49619400-49619419 | None:intergenic | 50.0% | |
| TTCTAAACACCTGCGACGAG+AGG | + | chr4_4:49619566-49619585 | None:intergenic | 50.0% | |
| !! | TTCTAGGTGCCGTTTAGCCT+GGG | - | chr4_4:49620363-49620382 | Msa0685480:intron | 50.0% |
| ! | CTAGCCTTTCCCAGGCTAAA+CGG | + | chr4_4:49621248-49621267 | None:intergenic | 50.0% |
| TTAGAACAGATCCGGTGAGG+TGG | + | chr4_4:49621107-49621126 | None:intergenic | 50.0% | |
| ! | GGTTTAGAACAGATCCGGTG+AGG | + | chr4_4:49621104-49621123 | None:intergenic | 50.0% |
| GCTACTAAAGTGAGATGGCC+TGG | + | chr4_4:49620773-49620792 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+TGG | - | chr4_4:49620929-49620948 | Msa0685480:intron | 50.0% | |
| AGAGAGAGAGAGAGAGATGG+AGG | - | chr4_4:49620944-49620963 | Msa0685480:intron | 50.0% | |
| AAGCTCTCTCTCTGCTCTCA+AGG | + | chr4_4:49620972-49620991 | None:intergenic | 50.0% | |
| GGAGTCATCTGTGATAGCTG+AGG | + | chr4_4:49620998-49621017 | None:intergenic | 50.0% | |
| CCAAAGTGTAAGAGGGAGGA+CGG | - | chr4_4:49621026-49621045 | Msa0685480:CDS | 50.0% | |
| ! | GGTTTAGAACAGATCCGGTG+AGG | - | chr4_4:49621104-49621123 | Msa0685480:CDS | 50.0% |
| TTAGAACAGATCCGGTGAGG+TGG | - | chr4_4:49621107-49621126 | Msa0685480:CDS | 50.0% | |
| ! | CTAGCCTTTCCCAGGCTAAA+CGG | - | chr4_4:49621248-49621267 | Msa0685480:CDS | 50.0% |
| !! | AGTATGGTGCCGTTTAGCCT+GGG | + | chr4_4:49621260-49621279 | None:intergenic | 50.0% |
| !! | AAGTATGGTGCCGTTTAGCC+TGG | + | chr4_4:49621261-49621280 | None:intergenic | 50.0% |
| GCAAGGTCTGTCTCACTAAG+TGG | - | chr4_4:49621477-49621496 | Msa0685480:intron | 50.0% | |
| TCTCACTAAGTGGTGCCTGA+CGG | - | chr4_4:49621487-49621506 | Msa0685480:intron | 50.0% | |
| ! | TCAAAGGGTGATACGGGTTG+TGG | - | chr4_4:49621574-49621593 | Msa0685480:intron | 50.0% |
| CCTTTGTCATCAGGATCAGC+AGG | + | chr4_4:49621795-49621814 | None:intergenic | 50.0% | |
| CCTGCTGATCCTGATGACAA+AGG | - | chr4_4:49621792-49621811 | Msa0685480:intron | 50.0% | |
| CAGGATATTGAGTGTGGTGG+TGG | - | chr4_4:49622379-49622398 | Msa0685480:intron | 50.0% | |
| GATCATTGAGGGGAATGGTG+GGG | + | chr4_4:49622636-49622655 | None:intergenic | 50.0% | |
| TGAACTACGTGCTGAAGGCA+AGG | - | chr4_4:49622834-49622853 | Msa0685480:intron | 50.0% | |
| !! | TGAAGCATTGACACGGACAC+CGG | - | chr4_4:49623183-49623202 | Msa0685480:intron | 50.0% |
| !! | TAGTGTCGGCGTTGCAATGT+TGG | + | chr4_4:49623217-49623236 | None:intergenic | 50.0% |
| !! | AATGTATCGGTGTCGTGGCT+AGG | - | chr4_4:49623273-49623292 | Msa0685480:intron | 50.0% |
| !! | AGGACACTATAGGAGGCATC+AGG | + | chr4_4:49623597-49623616 | None:intergenic | 50.0% |
| ATTGGGACATCCTTCCTCCA+AGG | - | chr4_4:49623658-49623677 | Msa0685480:intron | 50.0% | |
| CTCTATTGCAGCCAGCAGAT+TGG | - | chr4_4:49623930-49623949 | Msa0685480:intron | 50.0% | |
| ! | CCCTGATGATGTCAAACCAG+AGG | - | chr4_4:49623976-49623995 | Msa0685480:intron | 50.0% |
| TCCCGATCCGAAAGCCAAAA+AGG | - | chr4_4:49624427-49624446 | Msa0685480:intron | 50.0% | |
| !! | TGTTTGACTAGCCTGCTGAC+TGG | - | chr4_4:49624563-49624582 | Msa0685480:intron | 50.0% |
| !! | GTTTGACTAGCCTGCTGACT+GGG | - | chr4_4:49624564-49624583 | Msa0685480:intron | 50.0% |
| TCTTCATCATCCCAGTCAGC+AGG | + | chr4_4:49624577-49624596 | None:intergenic | 50.0% | |
| GGTCCTCTGTATGCTGGATT+AGG | + | chr4_4:49624628-49624647 | None:intergenic | 50.0% | |
| ATCCAGCATACAGAGGACCA+TGG | - | chr4_4:49624629-49624648 | Msa0685480:intron | 50.0% | |
| TTCCATGGTCCTCTGTATGC+TGG | + | chr4_4:49624634-49624653 | None:intergenic | 50.0% | |
| CAGAGGACCATGGAAACGAA+AGG | - | chr4_4:49624639-49624658 | Msa0685480:intron | 50.0% | |
| ACCCCAACTACAAGGGAAAG+TGG | - | chr4_4:49624753-49624772 | Msa0685480:intron | 50.0% | |
| AGGGAAAGTGGAAGACTCCA+TGG | - | chr4_4:49624765-49624784 | Msa0685480:intron | 50.0% | |
| ! | TGTTGGCATTGAAGTGTGGC+AGG | - | chr4_4:49625219-49625238 | Msa0685480:intron | 50.0% |
| CAAGAGAAGAGGGCGAAAAG+AGG | - | chr4_4:49625734-49625753 | Msa0685480:CDS | 50.0% | |
| CGAAAAGAGGAGGAGAGAGA+GGG | - | chr4_4:49625747-49625766 | Msa0685480:CDS | 50.0% | |
| GAAAAGAGGAGGAGAGAGAG+GGG | - | chr4_4:49625748-49625767 | Msa0685480:CDS | 50.0% | |
| AGAGAGAGGGGCAGTAGATA+TGG | - | chr4_4:49625760-49625779 | Msa0685480:CDS | 50.0% | |
| CACAACCCGTATCACCCCTT+TGG | - | chr4_4:49619391-49619410 | Msa0685480:intron | 55.0% | |
| AAGGCGGAGGTTTGCCAAAG+GGG | + | chr4_4:49619408-49619427 | None:intergenic | 55.0% | |
| GAAGGCGGAGGTTTGCCAAA+GGG | + | chr4_4:49619409-49619428 | None:intergenic | 55.0% | |
| TGAAGGCGGAGGTTTGCCAA+AGG | + | chr4_4:49619410-49619429 | None:intergenic | 55.0% | |
| !! | CTTCTAGGTGCCGTTTAGCC+TGG | - | chr4_4:49620362-49620381 | Msa0685480:intron | 55.0% |
| CCGTCCTCCCTCTTACACTT+TGG | + | chr4_4:49621029-49621048 | None:intergenic | 55.0% | |
| TTCGGATCGGGAATTTCCGC+TGG | + | chr4_4:49624419-49624438 | None:intergenic | 55.0% | |
| AAGAAGGGCTCGGGAAGAAG+AGG | - | chr4_4:49625601-49625620 | Msa0685480:intron | 55.0% | |
| GGCTCGGGAAGAAGAGGTAA+TGG | - | chr4_4:49625607-49625626 | Msa0685480:intron | 55.0% | |
| GCTCGAAGGGCAAGAGAAGA+GGG | - | chr4_4:49625724-49625743 | Msa0685480:CDS | 55.0% | |
| GAGAAGAGGGCGAAAAGAGG+AGG | - | chr4_4:49625737-49625756 | Msa0685480:CDS | 55.0% | |
| GCGAAAAGAGGAGGAGAGAG+AGG | - | chr4_4:49625746-49625765 | Msa0685480:CDS | 55.0% | |
| !! | ATGGAGATAAGAGGCGCCGT+AGG | - | chr4_4:49625779-49625798 | Msa0685480:CDS | 55.0% |
| GAGCACGACAAGCATGTCGG+CGG | + | chr4_4:49619454-49619473 | None:intergenic | 60.0% | |
| GCGGAGCACGACAAGCATGT+CGG | + | chr4_4:49619457-49619476 | None:intergenic | 60.0% | |
| GTGCACGACAAGCAGCAAGG+CGG | + | chr4_4:49619495-49619514 | None:intergenic | 60.0% | |
| GAGGTGCACGACAAGCAGCA+AGG | + | chr4_4:49619498-49619517 | None:intergenic | 60.0% | |
| CTGTGACAGGACGACGGAGA+CGG | + | chr4_4:49619529-49619548 | None:intergenic | 60.0% | |
| TACTGGGTACCTCTCGTCGC+AGG | - | chr4_4:49619554-49619573 | Msa0685480:intron | 60.0% | |
| !! | GGTGCCGTTTAGCCTGGGAA+AGG | - | chr4_4:49620368-49620387 | Msa0685480:intron | 60.0% |
| GGGGCAAGGAGGAAGATGAG+TGG | + | chr4_4:49621137-49621156 | None:intergenic | 60.0% | |
| GAACAGATCCGGTGAGGTGG+TGG | + | chr4_4:49621110-49621129 | None:intergenic | 60.0% | |
| TAAGAGGGAGGACGGTGCCT+TGG | - | chr4_4:49621034-49621053 | Msa0685480:CDS | 60.0% | |
| GAACAGATCCGGTGAGGTGG+TGG | - | chr4_4:49621110-49621129 | Msa0685480:CDS | 60.0% | |
| GGGGCAAGGAGGAAGATGAG+TGG | - | chr4_4:49621137-49621156 | Msa0685480:CDS | 60.0% | |
| !! | GGTGCCGTTTAGCCTGGGAA+AGG | + | chr4_4:49620368-49620387 | None:intergenic | 60.0% |
| !! | CAACGGTGGGTTGAAGGTGG+AGG | - | chr4_4:49621547-49621566 | Msa0685480:intron | 60.0% |
| GGCTCGAAGGGCAAGAGAAG+AGG | - | chr4_4:49625723-49625742 | Msa0685480:CDS | 60.0% | |
| !! | CAACGGTGGGTTGAAGGCGG+AGG | + | chr4_4:49619421-49619440 | None:intergenic | 65.0% |
| !! | CGGCAACGGTGGGTTGAAGG+CGG | + | chr4_4:49621544-49621563 | None:intergenic | 65.0% |
| ACAAGCATGTCGGCGGCGCA+CGG | + | chr4_4:49619447-49619466 | None:intergenic | 65.0% | |
| GACGACGGAGACGGCGAGAT+GGG | + | chr4_4:49619520-49619539 | None:intergenic | 65.0% | |
| !! | TCCGGTGAGGTGGTGGTGGT+GGG | + | chr4_4:49621117-49621136 | None:intergenic | 65.0% |
| !! | ATCCGGTGAGGTGGTGGTGG+TGG | + | chr4_4:49621116-49621135 | None:intergenic | 65.0% |
| ! | CAGATCCGGTGAGGTGGTGG+TGG | + | chr4_4:49621113-49621132 | None:intergenic | 65.0% |
| GCCGGCGAAAGGGAGATGGA+GGG | - | chr4_4:49621064-49621083 | Msa0685480:CDS | 65.0% | |
| CCCCTCCATCTCCCTTTCGC+CGG | + | chr4_4:49621068-49621087 | None:intergenic | 65.0% | |
| CCGGCGAAAGGGAGATGGAG+GGG | - | chr4_4:49621065-49621084 | Msa0685480:CDS | 65.0% | |
| GCGAAAGGGAGATGGAGGGG+CGG | - | chr4_4:49621068-49621087 | Msa0685480:CDS | 65.0% | |
| AAAGGGAGATGGAGGGGCGG+CGG | - | chr4_4:49621071-49621090 | Msa0685480:CDS | 65.0% | |
| ! | CAGATCCGGTGAGGTGGTGG+TGG | - | chr4_4:49621113-49621132 | Msa0685480:CDS | 65.0% |
| !! | ATCCGGTGAGGTGGTGGTGG+TGG | - | chr4_4:49621116-49621135 | Msa0685480:CDS | 65.0% |
| !! | TCCGGTGAGGTGGTGGTGGT+GGG | - | chr4_4:49621117-49621136 | Msa0685480:CDS | 65.0% |
| !! | CGGCAACGGTGGGTTGAAGG+TGG | - | chr4_4:49621544-49621563 | Msa0685480:intron | 65.0% |
| !! | CGGCGGCAACGGTGGGTTGA+AGG | + | chr4_4:49621541-49621560 | None:intergenic | 70.0% |
| ACAAGCAGCAAGGCGGCGCG+CGG | + | chr4_4:49619488-49619507 | None:intergenic | 70.0% | |
| GACGGAGACGGCGAGATGGG+AGG | + | chr4_4:49619517-49619536 | None:intergenic | 70.0% | |
| GGACGACGGAGACGGCGAGA+TGG | + | chr4_4:49619521-49619540 | None:intergenic | 70.0% | |
| !! | GTGGTGGTGGTGGGGCAAGG+AGG | + | chr4_4:49621126-49621145 | None:intergenic | 70.0% |
| !! | GAGGTGGTGGTGGTGGGGCA+AGG | + | chr4_4:49621123-49621142 | None:intergenic | 70.0% |
| !! | CCGGTGAGGTGGTGGTGGTG+GGG | + | chr4_4:49621118-49621137 | None:intergenic | 70.0% |
| CCCCACCACCACCACCTCAC+CGG | - | chr4_4:49620502-49620521 | Msa0685480:intron | 70.0% | |
| GAGGGAGGACGGTGCCTTGG+TGG | - | chr4_4:49621037-49621056 | Msa0685480:CDS | 70.0% | |
| GGAGGACGGTGCCTTGGTGG+CGG | - | chr4_4:49621040-49621059 | Msa0685480:CDS | 70.0% | |
| CGCCGGCGAAAGGGAGATGG+AGG | - | chr4_4:49621063-49621082 | Msa0685480:CDS | 70.0% | |
| CCCCACCACCACCACCTCAC+CGG | + | chr4_4:49620502-49620521 | None:intergenic | 70.0% | |
| !! | CCGGTGAGGTGGTGGTGGTG+GGG | - | chr4_4:49621118-49621137 | Msa0685480:CDS | 70.0% |
| !! | GAGGTGGTGGTGGTGGGGCA+AGG | - | chr4_4:49621123-49621142 | Msa0685480:CDS | 70.0% |
| !! | GTGGTGGTGGTGGGGCAAGG+AGG | - | chr4_4:49621126-49621145 | Msa0685480:CDS | 70.0% |
| TGGTGCCTGACGGCGACGCA+TGG | - | chr4_4:49621497-49621516 | Msa0685480:intron | 70.0% | |
| GGTGCCTGACGGCGACGCAT+GGG | - | chr4_4:49621498-49621517 | Msa0685480:intron | 70.0% | |
| GACGCATGGGCGGAGCAGAG+CGG | - | chr4_4:49621511-49621530 | Msa0685480:intron | 70.0% | |
| !! | CGGCGGCAACGGTGGGTTGA+AGG | - | chr4_4:49621541-49621560 | Msa0685480:intron | 70.0% |
| AGCATGTCGGCGGCGCACGG+CGG | + | chr4_4:49619444-49619463 | None:intergenic | 75.0% | |
| AAGGCGGCGCGCGGCGAGAT+GGG | + | chr4_4:49619479-49619498 | None:intergenic | 75.0% | |
| TTTCGCCGGCGCCGCCACCA+AGG | + | chr4_4:49621054-49621073 | None:intergenic | 75.0% | |
| !! | TTGGTGGCGGCGCCGGCGAA+AGG | - | chr4_4:49621053-49621072 | Msa0685480:CDS | 75.0% |
| !! | TGGTGGCGGCGCCGGCGAAA+GGG | - | chr4_4:49621054-49621073 | Msa0685480:CDS | 75.0% |
| !! | CGGCGCCGGCGAAAGGGAGA+TGG | - | chr4_4:49621060-49621079 | Msa0685480:CDS | 75.0% |
| TGGAGGGGCGGCGGCAGACA+CGG | - | chr4_4:49621080-49621099 | Msa0685480:CDS | 75.0% | |
| GCCTGACGGCGACGCATGGG+CGG | - | chr4_4:49621501-49621520 | Msa0685480:intron | 75.0% | |
| TCCGCCCATGCGTCGCCGTC+AGG | + | chr4_4:49621505-49621524 | None:intergenic | 75.0% | |
| GCATGGGCGGAGCAGAGCGG+CGG | - | chr4_4:49621514-49621533 | Msa0685480:intron | 75.0% | |
| ! | CGGCGCACGGCGGCAACGGT+GGG | + | chr4_4:49621534-49621553 | None:intergenic | 80.0% |
| ! | TCGGCGGCGCACGGCGGCAA+CGG | + | chr4_4:49619438-49619457 | None:intergenic | 80.0% |
| ! | CAAGGCGGCGCGCGGCGAGA+TGG | + | chr4_4:49619480-49619499 | None:intergenic | 80.0% |
| !!! | CGGTGCCTTGGTGGCGGCGC+CGG | - | chr4_4:49621046-49621065 | Msa0685480:CDS | 80.0% |
| ! | AGGGGCGGCGGCAGACACGG+AGG | - | chr4_4:49621083-49621102 | Msa0685480:CDS | 80.0% |
| ! | CGGAGCAGAGCGGCGGCGCA+CGG | - | chr4_4:49621521-49621540 | Msa0685480:intron | 80.0% |
| ! | AGCAGAGCGGCGGCGCACGG+CGG | - | chr4_4:49621524-49621543 | Msa0685480:intron | 80.0% |
| ! | CGGCGCACGGCGGCAACGGT+GGG | - | chr4_4:49621534-49621553 | Msa0685480:intron | 80.0% |
| ! | GCGGCGCACGGCGGCAACGG+TGG | + | chr4_4:49621533-49621552 | None:intergenic | 85.0% |
| ! | GCGGCGCGCGGCGAGATGGG+CGG | + | chr4_4:49619476-49619495 | None:intergenic | 85.0% |
| ! | GCGGCGGCGCACGGCGGCAA+CGG | - | chr4_4:49621530-49621549 | Msa0685480:intron | 85.0% |
| ! | GCGGCGCACGGCGGCAACGG+TGG | - | chr4_4:49621533-49621552 | Msa0685480:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 49618915 | 49625804 | 49618915 | ID=Msa0685480;Name=Msa0685480 |
| chr4_4 | mRNA | 49618915 | 49625804 | 49618915 | ID=Msa0685480-mRNA-1;Parent=Msa0685480;Name=Msa0685480-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0.8|0.81|1|0.9|0.90|11|0|352 |
| chr4_4 | exon | 49625702 | 49625804 | 49625702 | ID=Msa0685480-mRNA-1:exon:12571;Parent=Msa0685480-mRNA-1 |
| chr4_4 | exon | 49622255 | 49622393 | 49622255 | ID=Msa0685480-mRNA-1:exon:12570;Parent=Msa0685480-mRNA-1 |
| chr4_4 | exon | 49621012 | 49621270 | 49621012 | ID=Msa0685480-mRNA-1:exon:12569;Parent=Msa0685480-mRNA-1 |
| chr4_4 | exon | 49620722 | 49620778 | 49620722 | ID=Msa0685480-mRNA-1:exon:12568;Parent=Msa0685480-mRNA-1 |
| chr4_4 | exon | 49620271 | 49620318 | 49620271 | ID=Msa0685480-mRNA-1:exon:12567;Parent=Msa0685480-mRNA-1 |
| chr4_4 | exon | 49620059 | 49620145 | 49620059 | ID=Msa0685480-mRNA-1:exon:12566;Parent=Msa0685480-mRNA-1 |
| chr4_4 | exon | 49619919 | 49619976 | 49619919 | ID=Msa0685480-mRNA-1:exon:12565;Parent=Msa0685480-mRNA-1 |
| chr4_4 | exon | 49619479 | 49619546 | 49619479 | ID=Msa0685480-mRNA-1:exon:12564;Parent=Msa0685480-mRNA-1 |
| chr4_4 | exon | 49619246 | 49619341 | 49619246 | ID=Msa0685480-mRNA-1:exon:12563;Parent=Msa0685480-mRNA-1 |
| chr4_4 | exon | 49619097 | 49619153 | 49619097 | ID=Msa0685480-mRNA-1:exon:12562;Parent=Msa0685480-mRNA-1 |
| chr4_4 | exon | 49618915 | 49618998 | 49618915 | ID=Msa0685480-mRNA-1:exon:12561;Parent=Msa0685480-mRNA-1 |
| chr4_4 | CDS | 49625702 | 49625804 | 49625702 | ID=Msa0685480-mRNA-1:cds;Parent=Msa0685480-mRNA-1 |
| chr4_4 | CDS | 49622255 | 49622393 | 49622255 | ID=Msa0685480-mRNA-1:cds;Parent=Msa0685480-mRNA-1 |
| chr4_4 | CDS | 49621012 | 49621270 | 49621012 | ID=Msa0685480-mRNA-1:cds;Parent=Msa0685480-mRNA-1 |
| chr4_4 | CDS | 49620722 | 49620778 | 49620722 | ID=Msa0685480-mRNA-1:cds;Parent=Msa0685480-mRNA-1 |
| chr4_4 | CDS | 49620271 | 49620318 | 49620271 | ID=Msa0685480-mRNA-1:cds;Parent=Msa0685480-mRNA-1 |
| chr4_4 | CDS | 49620059 | 49620145 | 49620059 | ID=Msa0685480-mRNA-1:cds;Parent=Msa0685480-mRNA-1 |
| chr4_4 | CDS | 49619919 | 49619976 | 49619919 | ID=Msa0685480-mRNA-1:cds;Parent=Msa0685480-mRNA-1 |
| chr4_4 | CDS | 49619479 | 49619546 | 49619479 | ID=Msa0685480-mRNA-1:cds;Parent=Msa0685480-mRNA-1 |
| chr4_4 | CDS | 49619246 | 49619341 | 49619246 | ID=Msa0685480-mRNA-1:cds;Parent=Msa0685480-mRNA-1 |
| chr4_4 | CDS | 49619097 | 49619153 | 49619097 | ID=Msa0685480-mRNA-1:cds;Parent=Msa0685480-mRNA-1 |
| chr4_4 | CDS | 49618915 | 49618998 | 49618915 | ID=Msa0685480-mRNA-1:cds;Parent=Msa0685480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
