AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0689860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0689860 MtrunA17_Chr7g0264631 98.132 1338 11 1 1 1324 1 1338 0.0 2693
Msa0689860 MtrunA17_Chr1g0180601 85.821 1333 145 4 1 1317 1 1305 0.0 2320
Msa0689860 MtrunA17_Chr6g0453051 53.483 1249 545 10 76 1306 16 1246 0.0 1349
Msa0689860 MtrunA17_Chr5g0410921 48.687 1257 601 9 66 1307 1 1228 0.0 1208
Msa0689860 MtrunA17_Chr1g0156821 44.190 1265 654 9 63 1312 11 1238 0.0 1063
Msa0689860 MtrunA17_Chr2g0285191 44.368 1305 645 13 65 1306 6 1292 0.0 1061
Msa0689860 MtrunA17_Chr2g0285191 40.385 572 317 7 101 654 730 1295 1.47e-113 387
Msa0689860 MtrunA17_Chr2g0285311 44.287 1269 665 15 63 1306 13 1264 0.0 1060
Msa0689860 MtrunA17_Chr1g0193991 45.129 1283 661 17 51 1306 17 1283 0.0 1051
Msa0689860 MtrunA17_Chr6g0452041 42.594 1249 689 10 87 1311 21 1265 0.0 1047
Msa0689860 MtrunA17_Chr6g0452041 37.262 577 355 5 739 1312 32 604 1.77e-114 389
Msa0689860 MtrunA17_Chr6g0452111 42.823 1254 671 13 90 1314 31 1267 0.0 1036
Msa0689860 MtrunA17_Chr6g0452141 42.366 1251 694 9 87 1315 22 1267 0.0 1031
Msa0689860 MtrunA17_Chr4g0069361 42.644 1271 697 11 60 1307 14 1275 0.0 1029
Msa0689860 MtrunA17_Chr4g0069401 44.060 1271 670 14 63 1306 16 1272 0.0 1028
Msa0689860 MtrunA17_Chr6g0452171 42.980 1275 687 12 73 1314 2 1269 0.0 1025
Msa0689860 MtrunA17_Chr4g0069351 42.677 1270 696 11 60 1306 14 1274 0.0 1025
Msa0689860 MtrunA17_Chr2g0285301 43.505 1278 667 14 66 1306 1 1260 0.0 1023
Msa0689860 MtrunA17_Chr2g0285301 35.548 602 378 7 713 1307 5 603 2.93e-113 385
Msa0689860 MtrunA17_Chr7g0233901 42.765 1237 669 10 90 1306 20 1237 0.0 1020
Msa0689860 MtrunA17_Chr7g0233901 37.347 573 351 6 739 1307 28 596 2.57e-110 377
Msa0689860 MtrunA17_Chr4g0041871 42.949 1248 683 8 85 1306 1 1245 0.0 1011
Msa0689860 MtrunA17_Chr6g0451881 41.930 1264 696 12 73 1311 3 1253 0.0 1008
Msa0689860 MtrunA17_Chr6g0451881 37.848 539 324 6 778 1312 74 605 3.02e-108 371
Msa0689860 MtrunA17_Chr4g0039821 42.699 1267 691 14 65 1306 16 1272 0.0 1006
Msa0689860 MtrunA17_Chr3g0119381 42.823 1268 689 13 62 1303 35 1292 0.0 997
Msa0689860 MtrunA17_Chr3g0119381 35.395 582 368 7 729 1306 60 637 1.84e-113 387
Msa0689860 MtrunA17_Chr4g0069411 42.563 1264 696 12 64 1306 34 1288 0.0 995
Msa0689860 MtrunA17_Chr6g0481921 44.654 1169 610 11 164 1306 9 1166 0.0 987
Msa0689860 MtrunA17_Chr6g0481921 38.449 632 351 10 49 654 550 1169 9.46e-117 394
Msa0689860 MtrunA17_Chr6g0451911 40.457 1268 721 12 73 1313 2 1262 0.0 975
Msa0689860 MtrunA17_Chr3g0123411 44.657 1151 608 9 180 1307 1 1145 0.0 961
Msa0689860 MtrunA17_Chr3g0123411 37.766 564 333 4 105 652 584 1145 5.32e-107 366
Msa0689860 MtrunA17_Chr3g0123411 40.039 507 280 9 819 1312 1 496 2.08e-102 353
Msa0689860 MtrunA17_Chr8g0344651 41.011 1246 691 10 85 1306 256 1481 0.0 956
Msa0689860 MtrunA17_Chr8g0344651 33.122 631 396 8 42 655 864 1485 1.92e-89 319
Msa0689860 MtrunA17_Chr6g0486841 41.766 1257 670 13 74 1299 7 1232 0.0 944
Msa0689860 MtrunA17_Chr6g0486841 34.276 566 370 2 741 1306 34 597 1.67e-97 340
Msa0689860 MtrunA17_Chr3g0138211 41.588 1272 685 13 64 1306 34 1276 0.0 941
Msa0689860 MtrunA17_Chr6g0452061 42.025 790 416 11 543 1314 13 778 0.0 625
Msa0689860 MtrunA17_Chr6g0452061 35.009 577 343 7 95 651 206 770 2.01e-99 336
Msa0689860 MtrunA17_Chr1g0194031 39.775 890 499 12 51 916 13 889 0.0 613
Msa0689860 MtrunA17_Chr1g0194031 36.222 577 355 6 736 1306 53 622 1.31e-114 381
Msa0689860 MtrunA17_Chr8g0366481 49.233 587 293 3 723 1309 46 627 0.0 577
Msa0689860 MtrunA17_Chr8g0366481 39.223 566 317 9 105 652 69 625 2.09e-108 356
Msa0689860 MtrunA17_Chr7g0222781 41.614 632 355 5 684 1304 763 1391 3.41e-159 515
Msa0689860 MtrunA17_Chr7g0222781 40.810 642 349 7 84 702 64 697 2.92e-151 493
Msa0689860 MtrunA17_Chr7g0222781 34.954 658 393 12 18 649 743 1391 2.27e-102 357
Msa0689860 MtrunA17_Chr7g0222781 32.517 572 375 6 739 1306 78 642 1.01e-88 316
Msa0689860 MtrunA17_Chr1g0212701 41.139 632 358 5 684 1304 755 1383 6.13e-158 511
Msa0689860 MtrunA17_Chr1g0212701 41.014 651 347 10 84 711 65 701 1.02e-149 489
Msa0689860 MtrunA17_Chr1g0212701 35.866 658 387 11 18 649 735 1383 1.01e-102 357
Msa0689860 MtrunA17_Chr1g0212701 33.100 571 372 5 739 1309 79 639 9.58e-95 334
Msa0689860 MtrunA17_Chr3g0128381 40.262 611 338 11 716 1308 37 638 6.51e-144 452
Msa0689860 MtrunA17_Chr3g0128381 30.428 654 406 13 28 651 2 636 1.64e-78 273
Msa0689860 MtrunA17_Chr6g0452071 44.934 454 246 3 856 1307 4 455 2.22e-133 417
Msa0689860 MtrunA17_Chr6g0452071 39.735 453 254 4 216 651 4 454 1.75e-96 317
Msa0689860 MtrunA17_Chr8g0366451 46.747 415 207 1 144 544 33 447 1.81e-126 398
Msa0689860 MtrunA17_Chr8g0366451 32.316 393 258 4 808 1197 58 445 2.77e-62 220
Msa0689860 MtrunA17_Chr1g0194001 50.806 372 181 2 921 1291 2 372 1.33e-118 374
Msa0689860 MtrunA17_Chr1g0194001 47.568 370 179 3 283 637 4 373 8.07e-103 332
Msa0689860 MtrunA17_Chr3g0128391 38.779 557 265 7 170 653 1 554 3.46e-112 364
Msa0689860 MtrunA17_Chr3g0128391 33.570 423 261 9 813 1228 5 414 1.99e-60 218
Msa0689860 MtrunA17_Chr3g0128391 54.545 110 48 1 1199 1308 447 554 6.96e-31 129
Msa0689860 MtrunA17_Chr6g0452051 41.809 409 222 3 151 544 7 414 3.48e-102 332
Msa0689860 MtrunA17_Chr6g0452051 32.126 414 269 5 789 1197 6 412 4.57e-66 230
Msa0689860 MtrunA17_Chr4g0061601 35.112 581 363 9 729 1302 48 621 4.38e-98 328
Msa0689860 MtrunA17_Chr4g0061601 35.034 588 351 12 82 647 43 621 1.19e-87 298
Msa0689860 MtrunA17_Chr6g0452081 60.606 231 73 2 400 616 1 227 4.38e-81 265
Msa0689860 MtrunA17_Chr6g0452081 59.242 211 82 1 1061 1271 21 227 6.36e-77 254
Msa0689860 MtrunA17_Chr6g0474071 50.833 240 114 2 1065 1302 211 448 2.16e-75 258
Msa0689860 MtrunA17_Chr6g0474071 35.165 455 223 10 258 647 1 448 6.42e-64 225
Msa0689860 MtrunA17_Chr7g0227391 33.215 563 282 16 789 1306 151 664 1.71e-74 262
Msa0689860 MtrunA17_Chr7g0227391 33.205 521 264 17 179 651 180 664 5.30e-66 237
Msa0689860 MtrunA17_Chr5g0412741 31.892 555 301 13 789 1306 182 696 8.38e-71 252
Msa0689860 MtrunA17_Chr5g0412741 33.535 495 298 11 179 651 211 696 3.01e-61 224
Msa0689860 MtrunA17_Chr5g0433051 38.557 402 221 10 911 1302 312 697 5.46e-68 244
Msa0689860 MtrunA17_Chr5g0433051 39.809 314 162 7 354 647 391 697 1.04e-51 195
Msa0689860 MtrunA17_Chr6g0463151 25.671 1118 693 38 237 1304 251 1280 9.46e-65 241
Msa0689860 MtrunA17_Chr6g0463121 25.159 942 623 25 386 1304 580 1462 4.86e-63 236
Msa0689860 MtrunA17_Chr6g0463121 29.787 282 175 6 1048 1324 601 864 9.49e-29 125
Msa0689860 MtrunA17_Chr5g0433071 38.958 403 224 9 900 1293 303 692 1.15e-62 228
Msa0689860 MtrunA17_Chr5g0433071 39.812 319 165 8 354 652 393 704 3.00e-47 182
Msa0689860 MtrunA17_Chr6g0463211 25.103 972 602 32 386 1295 618 1525 2.40e-62 234
Msa0689860 MtrunA17_Chr6g0463211 24.860 535 324 21 176 649 1016 1533 9.05e-21 99.8
Msa0689860 MtrunA17_Chr6g0463131 24.037 961 610 28 386 1304 581 1463 6.90e-61 229
Msa0689860 MtrunA17_Chr6g0463131 28.975 283 177 6 1021 1296 572 837 1.03e-28 125
Msa0689860 MtrunA17_Chr2g0285731 24.945 910 599 27 426 1304 615 1471 8.44e-61 229
Msa0689860 MtrunA17_Chr2g0285731 31.687 243 145 6 423 649 1234 1471 8.84e-21 99.8
Msa0689860 MtrunA17_Chr6g0463141 23.368 1164 703 36 237 1312 432 1494 7.09e-60 226
Msa0689860 MtrunA17_Chr6g0463201 24.429 1138 688 40 227 1295 425 1459 1.31e-59 226
Msa0689860 MtrunA17_Chr6g0463201 28.470 281 181 5 1021 1296 576 841 3.04e-26 117
Msa0689860 MtrunA17_Chr6g0463201 30.453 243 145 8 424 649 1232 1467 1.44e-22 105
Msa0689860 MtrunA17_Chr6g0472531 24.578 948 627 27 386 1307 531 1416 1.82e-59 225
Msa0689860 MtrunA17_Chr3g0080941 24.449 908 614 26 422 1304 609 1469 1.21e-56 216
Msa0689860 MtrunA17_Chr3g0080981 24.031 903 623 24 422 1304 609 1468 2.73e-56 215
Msa0689860 MtrunA17_Chr1g0178481 29.672 519 339 13 792 1298 107 611 3.47e-56 207
Msa0689860 MtrunA17_Chr1g0178481 27.655 499 309 14 179 640 133 616 2.62e-42 165
Msa0689860 MtrunA17_Chr6g0471281 24.177 972 606 30 386 1310 581 1468 1.67e-55 212
Msa0689860 MtrunA17_Chr3g0101471 23.939 919 584 27 426 1293 430 1284 1.35e-54 209
Msa0689860 MtrunA17_Chr3g0101471 29.365 252 155 5 1052 1296 411 646 7.65e-24 109
Msa0689860 MtrunA17_Chr3g0101471 27.500 240 155 6 424 648 1058 1293 9.77e-19 92.8
Msa0689860 MtrunA17_Chr3g0101481 24.206 913 590 28 426 1293 624 1479 2.69e-53 205
Msa0689860 MtrunA17_Chr3g0101481 28.244 262 164 5 1043 1296 595 840 9.48e-25 112
Msa0689860 MtrunA17_Chr3g0101481 27.803 223 137 6 424 628 1253 1469 4.95e-19 94.0
Msa0689860 MtrunA17_Chr8g0363771 24.541 925 583 30 426 1304 636 1491 1.89e-52 202
Msa0689860 MtrunA17_Chr8g0363771 31.535 241 145 5 424 649 1256 1491 6.26e-24 110
Msa0689860 MtrunA17_Chr8g0363771 30.364 247 155 4 1053 1296 620 852 4.29e-22 103
Msa0689860 MtrunA17_Chr8g0353781 22.956 954 653 27 368 1294 538 1436 3.79e-52 201
Msa0689860 MtrunA17_Chr8g0353781 30.290 241 146 7 424 648 1209 1443 1.88e-22 105
Msa0689860 MtrunA17_Chr3g0101461 23.925 907 599 26 426 1293 432 1286 3.93e-52 201
Msa0689860 MtrunA17_Chr3g0101461 29.771 262 160 6 1043 1296 403 648 4.23e-24 110
Msa0689860 MtrunA17_Chr3g0101461 28.099 242 151 6 424 648 1060 1295 2.11e-19 95.1
Msa0689860 MtrunA17_Chr8g0341751 23.068 906 600 27 426 1294 424 1269 8.44e-49 190
Msa0689860 MtrunA17_Chr8g0341751 28.966 290 182 7 1008 1291 364 635 2.88e-23 107
Msa0689860 MtrunA17_Chr8g0341751 30.290 241 146 7 424 648 1042 1276 3.21e-22 104
Msa0689860 MtrunA17_Chr8g0353541 22.648 914 594 25 426 1294 208 1053 7.63e-48 187
Msa0689860 MtrunA17_Chr8g0353541 30.290 241 146 7 424 648 826 1060 6.91e-23 106
Msa0689860 MtrunA17_Chr8g0353541 28.767 292 184 7 1008 1293 148 421 2.00e-22 104
Msa0689860 MtrunA17_Chr1g0195691 23.988 963 623 28 385 1304 610 1506 8.36e-48 187
Msa0689860 MtrunA17_Chr1g0195691 29.365 252 152 7 424 658 1271 1513 1.89e-23 108
Msa0689860 MtrunA17_Chr8g0341811 24.239 887 552 28 444 1294 455 1257 2.93e-47 185
Msa0689860 MtrunA17_Chr8g0341811 29.876 241 147 7 424 648 1030 1264 1.46e-22 105
Msa0689860 MtrunA17_Chr8g0366471 67.890 109 34 1 543 651 18 125 5.41e-44 156
Msa0689860 MtrunA17_Chr8g0366471 57.377 122 47 3 1187 1306 7 125 9.09e-39 141
Msa0689860 MtrunA17_Chr6g0452091 36.190 210 132 2 168 376 32 240 1.99e-43 158
Msa0689860 MtrunA17_Chr6g0452091 26.316 209 147 3 792 997 17 221 7.40e-17 81.6
Msa0689860 MtrunA17_Chr6g0463181 24.678 543 350 14 788 1304 937 1446 1.49e-36 151
Msa0689860 MtrunA17_Chr6g0463181 27.088 443 280 11 869 1296 409 823 1.34e-30 131
Msa0689860 MtrunA17_Chr6g0463181 29.618 314 210 8 358 667 542 848 4.65e-26 117
Msa0689860 MtrunA17_Chr6g0463181 30.453 243 150 7 422 649 1208 1446 6.75e-22 103
Msa0689860 MtrunA17_Chr6g0463391 25.138 545 321 18 788 1292 139 636 3.66e-35 144
Msa0689860 MtrunA17_Chr6g0463391 23.468 669 411 21 22 649 39 647 2.13e-22 103
Msa0689860 MtrunA17_Chr1g0183191 25.141 533 339 16 788 1293 1009 1508 4.99e-34 143
Msa0689860 MtrunA17_Chr1g0183191 26.036 507 324 14 173 648 1031 1517 1.55e-24 112
Msa0689860 MtrunA17_Chr1g0183191 28.185 259 178 6 425 680 642 895 2.98e-22 104
Msa0689860 MtrunA17_Chr1g0183191 27.046 281 184 5 1021 1296 595 859 4.99e-21 100
Msa0689860 MtrunA17_Chr2g0333911 29.752 242 164 5 1064 1304 771 1007 1.38e-32 137
Msa0689860 MtrunA17_Chr2g0333911 22.222 513 340 18 173 649 518 1007 2.07e-22 104
Msa0689860 MtrunA17_Chr2g0333911 27.706 231 156 5 442 666 176 401 2.02e-19 95.1
Msa0689860 MtrunA17_Chr2g0333911 29.858 211 128 5 1084 1290 177 371 1.48e-17 89.0
Msa0689860 MtrunA17_Chr8g0359291 24.030 541 360 17 786 1304 133 644 2.81e-32 135
Msa0689860 MtrunA17_Chr8g0359291 28.807 243 154 5 422 649 406 644 9.56e-21 98.6
Msa0689860 MtrunA17_Chr1g0202221 25.641 507 317 15 811 1304 910 1369 3.93e-32 136
Msa0689860 MtrunA17_Chr1g0202221 28.685 251 158 6 1051 1296 601 835 7.62e-24 109
Msa0689860 MtrunA17_Chr1g0202221 27.875 287 197 7 391 673 586 866 3.01e-23 107
Msa0689860 MtrunA17_Chr1g0202221 28.980 245 151 7 422 649 1131 1369 8.81e-20 96.3
Msa0689860 MtrunA17_Chr8g0376961 24.254 503 323 13 817 1292 950 1421 4.28e-32 136
Msa0689860 MtrunA17_Chr8g0376961 30.078 256 158 7 424 664 1196 1445 3.24e-26 117
Msa0689860 MtrunA17_Chr8g0376961 33.010 206 118 6 1090 1291 610 799 1.68e-21 102
Msa0689860 MtrunA17_Chr8g0376961 22.981 483 314 14 222 670 375 833 4.41e-19 94.4
Msa0689860 MtrunA17_Chr2g0295901 30.041 243 162 5 1064 1304 1255 1491 2.09e-31 134
Msa0689860 MtrunA17_Chr2g0295901 32.700 263 161 6 426 686 641 889 5.07e-27 120
Msa0689860 MtrunA17_Chr2g0295901 31.405 242 144 6 424 649 1256 1491 2.30e-24 111
Msa0689860 MtrunA17_Chr2g0295901 30.736 231 145 3 1067 1296 641 857 2.56e-20 98.2
Msa0689860 MtrunA17_Chr8g0341761 30.769 247 159 4 1053 1294 1191 1430 2.10e-31 134
Msa0689860 MtrunA17_Chr8g0341761 28.479 309 183 9 1008 1298 536 824 6.90e-23 106
Msa0689860 MtrunA17_Chr8g0341761 21.053 589 408 15 368 942 535 1080 1.84e-22 105
Msa0689860 MtrunA17_Chr8g0341761 29.502 261 155 8 424 668 1203 1450 2.54e-22 104
Msa0689860 MtrunA17_Chr7g0262191 25.319 549 347 16 773 1294 997 1509 3.72e-31 133
Msa0689860 MtrunA17_Chr7g0262191 28.826 281 179 6 1021 1296 591 855 1.78e-23 108
Msa0689860 MtrunA17_Chr7g0262191 29.864 221 146 5 426 641 639 855 9.42e-23 106
Msa0689860 MtrunA17_Chr7g0262191 24.510 510 328 14 173 648 1031 1517 1.05e-22 105
Msa0689860 MtrunA17_Chr8g0341851 30.172 232 158 3 1064 1294 1217 1445 4.10e-31 133
Msa0689860 MtrunA17_Chr8g0341851 29.085 306 186 7 1008 1298 545 834 5.85e-23 107
Msa0689860 MtrunA17_Chr8g0341851 27.068 266 182 6 426 686 606 864 4.07e-21 100
Msa0689860 MtrunA17_Chr8g0341851 27.917 240 154 6 424 648 1218 1453 1.10e-20 99.4
Msa0689860 MtrunA17_Chr2g0295921 29.365 252 170 5 1055 1304 1261 1506 4.64e-31 133
Msa0689860 MtrunA17_Chr2g0295921 32.319 263 166 6 426 686 653 905 2.22e-27 121
Msa0689860 MtrunA17_Chr2g0295921 31.405 242 144 6 424 649 1271 1506 3.51e-24 110
Msa0689860 MtrunA17_Chr2g0295921 30.364 247 155 4 1053 1296 637 869 1.94e-22 105
Msa0689860 MtrunA17_Chr5g0412721 23.598 517 321 18 822 1303 1002 1479 1.09e-30 132
Msa0689860 MtrunA17_Chr5g0412721 28.235 255 163 5 1045 1296 598 835 8.12e-24 109
Msa0689860 MtrunA17_Chr5g0412721 26.562 448 289 13 221 641 401 835 2.08e-20 98.6
Msa0689860 MtrunA17_Chr5g0412721 28.333 240 153 6 424 648 1244 1479 2.80e-20 98.2
Msa0689860 MtrunA17_Chr5g0445671 22.600 500 328 13 822 1293 616 1084 1.58e-30 131
Msa0689860 MtrunA17_Chr5g0445671 29.020 255 161 5 1045 1296 218 455 5.76e-25 113
Msa0689860 MtrunA17_Chr5g0445671 22.807 513 336 15 173 649 606 1094 2.77e-21 101
Msa0689860 MtrunA17_Chr5g0445671 26.211 454 293 13 217 641 15 455 5.23e-20 97.1
Msa0689860 MtrunA17_Chr5g0412941 26.877 253 179 5 1053 1303 70 318 2.28e-30 123
Msa0689860 MtrunA17_Chr5g0412941 28.750 240 152 5 424 648 83 318 9.25e-23 101
Msa0689860 MtrunA17_Chr2g0295911 29.630 243 163 5 1064 1304 1258 1494 2.40e-30 130
Msa0689860 MtrunA17_Chr2g0295911 32.308 260 164 6 426 683 641 890 8.00e-28 122
Msa0689860 MtrunA17_Chr2g0295911 31.405 242 144 6 424 649 1259 1494 7.00e-24 109
Msa0689860 MtrunA17_Chr2g0295911 29.961 257 163 4 1043 1296 615 857 2.18e-22 105
Msa0689860 MtrunA17_Chr8g0393151 32.877 219 130 5 1084 1294 35 244 6.53e-30 120
Msa0689860 MtrunA17_Chr8g0393151 29.524 210 126 6 443 635 35 239 8.37e-18 84.7
Msa0689860 MtrunA17_Chr5g0445741 23.225 521 340 15 811 1303 996 1484 8.18e-30 129
Msa0689860 MtrunA17_Chr5g0445741 28.627 255 162 5 1045 1296 609 846 1.33e-24 112
Msa0689860 MtrunA17_Chr5g0445741 28.333 240 153 5 424 648 1249 1484 1.66e-21 102
Msa0689860 MtrunA17_Chr5g0445741 32.432 222 139 6 426 641 630 846 2.16e-20 98.6
Msa0689860 MtrunA17_Chr3g0085281 22.599 531 346 14 810 1303 952 1454 8.71e-30 129
Msa0689860 MtrunA17_Chr3g0085281 29.752 242 147 6 424 648 1219 1454 6.30e-24 110
Msa0689860 MtrunA17_Chr3g0085281 23.404 470 321 10 209 659 374 823 3.00e-22 104
Msa0689860 MtrunA17_Chr3g0085281 32.843 204 118 6 1092 1291 617 805 6.65e-21 100
Msa0689860 MtrunA17_Chr8g0337121 29.412 221 154 2 1084 1304 1275 1493 9.85e-30 129
Msa0689860 MtrunA17_Chr8g0337121 24.099 527 336 17 170 661 1007 1504 7.26e-25 113
Msa0689860 MtrunA17_Chr8g0337121 29.114 237 149 4 1061 1294 621 841 5.32e-23 107
Msa0689860 MtrunA17_Chr8g0337121 28.000 300 187 7 364 639 547 841 1.57e-20 99.0
Msa0689860 MtrunA17_Chr8g0337191 28.959 221 155 2 1084 1304 1255 1473 4.94e-29 126
Msa0689860 MtrunA17_Chr8g0337191 23.909 527 337 17 170 661 987 1484 4.76e-25 113
Msa0689860 MtrunA17_Chr8g0337191 28.270 237 151 4 1061 1294 601 821 2.16e-22 105
Msa0689860 MtrunA17_Chr8g0337191 27.711 332 207 9 364 669 527 851 5.66e-21 100
Msa0689860 MtrunA17_Chr6g0484351 24.272 515 360 13 793 1294 140 637 5.92e-29 124
Msa0689860 MtrunA17_Chr6g0484351 29.876 241 147 6 424 648 410 644 4.73e-23 105
Msa0689860 MtrunA17_Chr3g0101441 28.261 230 161 3 1065 1293 1060 1286 1.50e-28 125
Msa0689860 MtrunA17_Chr3g0101441 29.365 252 155 5 1052 1296 413 648 7.98e-24 109
Msa0689860 MtrunA17_Chr3g0101441 28.627 255 171 6 426 677 432 678 1.51e-23 108
Msa0689860 MtrunA17_Chr3g0101441 27.917 240 154 6 424 648 1060 1295 3.25e-19 94.7
Msa0689860 MtrunA17_Chr5g0445701 29.412 221 148 3 1080 1293 7 226 2.08e-27 112
Msa0689860 MtrunA17_Chr5g0445701 29.442 197 122 3 436 618 7 200 5.49e-19 88.2
Msa0689860 MtrunA17_Chr8g0341801 29.508 244 166 4 1053 1294 173 412 4.57e-26 113
Msa0689860 MtrunA17_Chr8g0341801 27.969 261 159 8 424 668 185 432 2.67e-17 86.3
Msa0689860 MtrunA17_Chr2g0285231 60.494 81 32 0 555 635 19 99 8.53e-25 100
Msa0689860 MtrunA17_Chr2g0285231 57.831 83 35 0 1210 1292 19 101 3.49e-24 98.6
Msa0689860 MtrunA17_Chr5g0412921 29.412 255 160 5 1045 1296 589 826 1.63e-24 111
Msa0689860 MtrunA17_Chr5g0412921 31.507 219 145 4 426 641 610 826 1.41e-20 99.0
Msa0689860 MtrunA17_Chr6g0463401 34.946 186 103 3 1061 1244 622 791 1.89e-22 104
Msa0689860 MtrunA17_Chr6g0463401 25.450 389 259 9 240 617 449 817 1.32e-20 98.6
Msa0689860 MtrunA17_Chr2g0300791 37.719 114 65 1 727 840 12 119 4.21e-22 94.4
Msa0689860 MtrunA17_Chr3g0130211 31.858 226 129 9 1067 1285 36 243 1.50e-21 95.9
Msa0689860 MtrunA17_Chr3g0130211 29.864 221 139 7 420 630 29 243 2.74e-15 77.8
Msa0689860 MtrunA17_Chr6g0484361 29.167 216 149 4 402 615 581 794 1.54e-19 95.1
Msa0689860 MtrunA17_Chr6g0484361 30.531 226 136 5 1042 1264 581 788 1.82e-19 95.1
Msa0689860 MtrunA17_Chr2g0285211 40.187 107 64 0 351 457 14 120 2.29e-19 85.1
Msa0689860 MtrunA17_Chr2g0285211 35.514 107 68 1 992 1098 15 120 2.44e-17 79.3
Msa0689860 MtrunA17_Chr8g0341791 22.989 348 246 8 490 836 16 342 2.93e-19 91.3
Msa0689860 MtrunA17_Chr8g0341791 30.811 185 110 5 1145 1314 16 197 4.11e-15 78.6
Msa0689860 MtrunA17_Chr8g0349441 31.609 174 101 3 1067 1240 45 200 2.22e-17 82.4
Msa0689860 MtrunA17_Chr8g0349441 27.329 161 111 2 426 585 45 200 1.84e-13 71.2
Msa0689860 MtrunA17_Chr1g0181461 30.222 225 124 7 420 626 328 537 2.03e-15 81.3
Msa0689860 MtrunA17_Chr1g0176451 29.231 260 157 9 443 678 23 279 4.94e-15 80.1
Msa0689860 MtrunA17_Chr1g0202431 28.054 221 143 7 1077 1290 44 255 7.92e-15 79.3
Msa0689860 MtrunA17_Chr1g0176441 28.374 289 175 10 393 651 112 398 1.37e-14 79.0
Msa0689860 MtrunA17_Chr1g0176441 26.007 273 163 12 1051 1295 126 387 5.53e-11 67.4
Msa0689860 MtrunA17_Chr7g0249091 29.437 231 123 10 1084 1285 100 319 3.31e-14 75.9
Msa0689860 MtrunA17_Chr7g0249091 29.839 248 126 12 425 633 85 323 6.20e-14 75.1
Msa0689860 MtrunA17_Chr7g0220881 29.333 225 126 7 420 626 482 691 5.21e-14 77.0
Msa0689860 MtrunA17_Chr8g0371361 29.333 225 126 7 420 626 480 689 5.76e-14 77.0
Msa0689860 MtrunA17_Chr8g0359931 29.907 214 128 9 1092 1292 74 278 6.36e-14 76.6
Msa0689860 MtrunA17_Chr8g0359931 31.053 190 111 7 440 611 63 250 1.20e-11 69.3
Msa0689860 MtrunA17_Chr3g0129301 26.423 246 154 8 1064 1307 430 650 1.29e-13 75.9
Msa0689860 MtrunA17_Chr4g0060431 24.893 233 157 8 1076 1299 606 829 8.66e-13 73.2
Msa0689860 MtrunA17_Chr3g0128401 37.647 85 50 1 62 146 16 97 1.09e-12 65.9
Msa0689860 MtrunA17_Chr1g0200651 29.032 217 135 6 437 634 84 300 1.18e-12 72.8
Msa0689860 MtrunA17_Chr3g0093091 24.464 233 158 7 1076 1299 626 849 1.18e-12 72.8
Msa0689860 MtrunA17_Chr7g0257341 25.862 232 160 8 1067 1294 554 777 2.19e-12 72.4
Msa0689860 MtrunA17_Chr2g0316301 29.362 235 138 9 425 635 54 284 2.78e-12 71.2
Msa0689860 MtrunA17_Chr2g0316301 25.108 231 155 9 1068 1286 56 280 9.54e-11 66.2
Msa0689860 MtrunA17_Chr4g0060501 24.545 220 151 7 1086 1299 634 844 3.76e-12 71.2
Msa0689860 MtrunA17_Chr3g0130331 23.482 247 163 7 1084 1317 58 291 5.80e-12 70.5
Msa0689860 MtrunA17_Chr8g0393191 28.571 189 125 7 1084 1265 69 254 6.60e-12 70.5
Msa0689860 MtrunA17_Chr7g0267971 27.700 213 131 7 443 634 160 370 6.67e-12 70.1
Msa0689860 MtrunA17_Chr7g0267971 27.917 240 139 10 1051 1266 116 345 6.73e-11 67.0
Msa0689860 MtrunA17_Chr5g0411621 28.713 202 115 9 1081 1266 48 236 7.61e-12 70.1
Msa0689860 MtrunA17_Chr5g0411621 27.500 280 169 9 403 652 14 289 6.15e-11 67.0
Msa0689860 MtrunA17_Chr8g0384391 23.265 245 169 8 1084 1320 56 289 8.44e-12 69.7
Msa0689860 MtrunA17_Chr1g0199471 27.749 191 124 6 1084 1265 517 702 1.04e-11 70.1
Msa0689860 MtrunA17_Chr4g0060421 23.913 230 163 7 1076 1299 141 364 1.10e-11 68.9
Msa0689860 MtrunA17_Chr1g0198931 29.808 208 114 8 443 624 107 308 1.18e-11 69.3
Msa0689860 MtrunA17_Chr4g0065231 29.218 243 126 11 429 635 57 289 1.39e-11 68.9
Msa0689860 MtrunA17_Chr5g0446901 32.039 206 116 8 443 625 109 313 2.59e-11 68.2
Msa0689860 MtrunA17_Chr8g0374191 40.541 74 43 1 278 351 2 74 2.63e-11 61.2
Msa0689860 MtrunA17_Chr4g0039261 31.683 202 115 10 1088 1278 55 244 4.97e-11 67.4
Msa0689860 MtrunA17_Chr2g0318061 29.487 234 139 10 440 651 28 257 5.42e-11 66.2
Msa0689860 MtrunA17_Chr7g0263351 30.409 171 102 5 442 595 126 296 7.56e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0689860 AT2G36910.1 87.709 1253 139 2 85 1322 27 1279 0.0 2256
Msa0689860 AT2G36910.1 36.833 581 349 5 104 668 702 1280 1.81e-103 358
Msa0689860 AT3G28860.1 53.025 1256 546 10 76 1310 18 1250 0.0 1334
Msa0689860 AT4G25960.1 47.895 1259 613 8 64 1307 39 1269 0.0 1209
Msa0689860 AT1G10680.1 47.364 1252 602 11 72 1307 11 1221 0.0 1182
Msa0689860 AT1G28010.1 48.295 1232 599 8 90 1306 36 1244 0.0 1177
Msa0689860 AT1G10680.2 47.064 1192 575 10 72 1247 11 1162 0.0 1114
Msa0689860 AT1G10680.2 38.840 569 329 8 745 1306 43 599 2.03e-116 393
Msa0689860 AT3G28345.1 43.730 1276 639 10 67 1306 4 1236 0.0 1042
Msa0689860 AT3G28345.1 36.788 579 357 5 739 1313 31 604 9.88e-112 381
Msa0689860 AT3G28390.1 42.672 1235 668 9 90 1307 11 1222 0.0 1031
Msa0689860 AT3G28390.1 37.081 596 354 9 739 1323 19 604 2.15e-117 397
Msa0689860 AT1G02520.1 43.516 1257 667 12 82 1311 38 1278 0.0 1030
Msa0689860 AT1G02520.2 43.516 1257 667 12 82 1311 38 1278 0.0 1030
Msa0689860 AT1G02520.3 43.516 1257 667 12 82 1311 38 1278 0.0 1030
Msa0689860 AT3G28360.1 42.765 1237 666 10 90 1307 10 1223 0.0 1030
Msa0689860 AT3G28360.1 35.798 595 365 7 739 1323 18 605 2.13e-108 372
Msa0689860 AT3G28380.1 42.778 1260 676 13 67 1307 4 1237 0.0 1023
Msa0689860 AT3G28380.1 37.377 610 359 10 716 1312 4 603 1.84e-117 397
Msa0689860 AT3G62150.3 42.937 1253 673 13 77 1306 58 1291 0.0 1020
Msa0689860 AT3G62150.2 42.937 1253 673 13 77 1306 58 1291 0.0 1020
Msa0689860 AT3G62150.1 42.937 1253 673 13 77 1306 58 1291 0.0 1020
Msa0689860 AT2G47000.6 43.965 1251 657 15 85 1306 46 1281 0.0 1014
Msa0689860 AT2G47000.5 43.965 1251 657 15 85 1306 46 1281 0.0 1014
Msa0689860 AT2G47000.1 43.965 1251 657 15 85 1306 46 1281 0.0 1014
Msa0689860 AT3G28415.2 42.314 1236 676 10 90 1307 10 1226 0.0 1010
Msa0689860 AT3G28415.2 36.960 579 360 4 736 1312 15 590 2.52e-113 385
Msa0689860 AT3G28415.2 34.261 575 345 9 105 655 664 1229 3.08e-96 337
Msa0689860 AT1G02530.1 42.645 1278 689 14 62 1311 12 1273 0.0 999
Msa0689860 AT1G02530.1 37.607 585 346 7 751 1321 45 624 1.15e-110 379
Msa0689860 AT3G28415.1 42.071 1236 671 12 90 1307 10 1218 0.0 997
Msa0689860 AT3G28415.1 37.088 577 354 4 736 1312 15 582 1.73e-110 377
Msa0689860 AT3G28415.1 34.261 575 345 9 105 655 656 1221 2.52e-96 337
Msa0689860 AT4G01830.1 42.332 1252 678 11 71 1306 2 1225 0.0 991
Msa0689860 AT5G46540.1 43.261 1239 668 11 85 1303 18 1241 0.0 989
Msa0689860 AT4G18050.1 43.207 1266 661 12 64 1306 2 1232 0.0 986
Msa0689860 AT4G18050.2 43.333 1260 656 12 70 1306 18 1242 0.0 985
Msa0689860 AT4G01820.1 42.342 1247 679 12 76 1306 2 1224 0.0 964
Msa0689860 AT4G01820.1 38.983 590 349 9 723 1307 4 587 1.06e-112 384
Msa0689860 AT2G47000.2 42.165 1136 614 14 85 1191 46 1167 0.0 866
Msa0689860 AT2G47000.2 38.038 581 351 7 729 1306 48 622 1.13e-110 377
Msa0689860 AT2G47000.2 32.265 499 307 8 66 540 686 1177 1.30e-68 253
Msa0689860 AT4G01830.2 43.350 1015 535 9 308 1306 1 991 0.0 811
Msa0689860 AT4G01830.2 38.475 577 330 7 101 660 428 996 7.88e-114 382
Msa0689860 AT2G47000.4 40.673 1040 575 13 85 1096 46 1071 0.0 759
Msa0689860 AT2G47000.4 38.250 583 347 7 729 1306 48 622 6.56e-111 376
Msa0689860 AT2G47000.3 40.651 952 524 12 85 1008 46 984 0.0 694
Msa0689860 AT2G47000.3 38.038 581 351 7 729 1306 48 622 6.60e-112 377
Msa0689860 AT2G47000.7 40.651 952 524 12 85 1008 46 984 0.0 694
Msa0689860 AT2G47000.7 38.038 581 351 7 729 1306 48 622 6.60e-112 377
Msa0689860 AT1G02530.2 39.179 975 551 12 62 1011 12 969 0.0 664
Msa0689860 AT1G02530.2 37.607 585 346 7 751 1321 45 624 4.32e-113 379
Msa0689860 AT4G01820.2 38.960 942 539 9 76 1003 2 921 0.0 660
Msa0689860 AT4G01820.2 38.983 590 349 9 723 1307 4 587 1.30e-114 383
Msa0689860 AT1G27940.2 49.393 577 290 2 730 1306 454 1028 0.0 616
Msa0689860 AT1G27940.2 38.448 567 327 6 104 653 469 1030 4.45e-115 386
Msa0689860 AT1G27940.1 50.166 602 268 7 90 667 35 628 0.0 600
Msa0689860 AT2G39480.2 41.390 633 351 6 678 1304 596 1214 7.24e-164 523
Msa0689860 AT2G39480.2 42.287 551 280 8 193 725 1 531 3.19e-128 427
Msa0689860 AT2G39480.2 33.979 671 405 11 6 649 555 1214 4.91e-100 348
Msa0689860 AT2G39480.2 35.983 478 299 5 832 1309 1 471 4.10e-83 298
Msa0689860 AT2G39480.1 41.390 633 351 6 678 1304 776 1394 6.71e-162 523
Msa0689860 AT2G39480.1 41.114 664 349 10 84 725 68 711 1.07e-156 508
Msa0689860 AT2G39480.1 33.979 671 405 11 6 649 735 1394 4.57e-99 347
Msa0689860 AT2G39480.1 33.218 578 371 8 739 1309 82 651 5.22e-90 320
Msa0689860 AT3G55320.1 41.331 646 366 4 669 1304 753 1395 1.15e-161 522
Msa0689860 AT3G55320.1 41.835 643 340 9 76 689 61 698 1.73e-154 503
Msa0689860 AT3G55320.1 33.648 636 398 8 31 649 767 1395 7.34e-96 338
Msa0689860 AT3G55320.1 32.929 577 374 7 739 1309 84 653 2.24e-89 318
Msa0689860 AT5G39040.1 35.812 511 317 6 799 1306 132 634 2.11e-88 301
Msa0689860 AT5G39040.1 34.873 628 378 12 47 651 15 634 6.03e-88 300
Msa0689860 AT1G70610.2 32.468 539 283 13 807 1306 18 514 2.23e-77 266
Msa0689860 AT1G70610.2 32.755 519 276 11 179 654 29 517 3.81e-68 239
Msa0689860 AT1G70610.1 32.316 557 296 13 789 1306 181 695 4.44e-77 270
Msa0689860 AT1G70610.1 32.755 519 276 11 179 654 210 698 5.78e-67 241
Msa0689860 AT4G25450.3 51.220 246 116 2 1065 1308 299 542 3.01e-69 243
Msa0689860 AT4G25450.3 34.918 547 273 14 180 656 12 545 1.70e-63 227
Msa0689860 AT4G25450.1 51.220 246 116 2 1065 1308 468 711 2.16e-67 243
Msa0689860 AT4G25450.1 31.766 702 370 23 32 656 45 714 9.12e-63 229
Msa0689860 AT5G58270.1 37.000 400 230 8 911 1302 325 710 8.29e-65 235
Msa0689860 AT5G58270.1 38.005 371 180 11 304 652 373 715 5.93e-53 199
Msa0689860 AT4G28630.1 29.658 644 393 16 690 1302 54 668 1.11e-64 234
Msa0689860 AT4G28630.1 39.623 318 164 8 361 656 366 677 1.43e-51 194
Msa0689860 AT4G28620.1 31.528 517 322 9 800 1302 172 670 4.93e-64 232
Msa0689860 AT4G28620.1 40.256 313 159 8 361 651 368 674 3.26e-52 196
Msa0689860 AT2G34660.1 25.271 922 587 30 426 1304 614 1476 4.06e-62 234
Msa0689860 AT2G34660.1 29.918 244 148 7 423 649 1239 1476 4.48e-19 94.7
Msa0689860 AT2G34660.2 25.271 922 587 30 426 1304 614 1476 4.06e-62 234
Msa0689860 AT2G34660.2 29.918 244 148 7 423 649 1239 1476 4.48e-19 94.7
Msa0689860 AT2G34660.3 25.271 922 587 30 426 1304 327 1189 4.39e-62 233
Msa0689860 AT2G34660.3 29.918 244 148 7 423 649 952 1189 5.84e-19 94.4
Msa0689860 AT1G30400.2 25.027 919 588 27 426 1304 614 1471 1.72e-59 226
Msa0689860 AT1G30400.2 29.562 274 172 6 423 680 1234 1502 2.37e-21 102
Msa0689860 AT1G30400.1 25.027 919 588 27 426 1304 614 1471 1.72e-59 226
Msa0689860 AT1G30400.1 29.562 274 172 6 423 680 1234 1502 2.37e-21 102
Msa0689860 AT3G62700.1 25.564 931 602 28 426 1304 639 1530 8.79e-58 220
Msa0689860 AT5G03910.1 33.911 519 327 14 787 1298 118 627 1.18e-57 212
Msa0689860 AT5G03910.1 30.948 559 327 19 123 639 90 631 5.87e-51 192
Msa0689860 AT2G47800.1 24.865 925 591 26 426 1304 641 1507 3.51e-56 215
Msa0689860 AT2G47800.1 30.000 250 153 6 424 658 1272 1514 2.30e-22 105
Msa0689860 AT1G30420.1 23.432 909 603 24 426 1299 615 1465 8.53e-56 214
Msa0689860 AT1G30420.1 30.962 239 141 6 424 644 1233 1465 6.88e-20 97.4
Msa0689860 AT3G13100.2 24.578 948 608 32 385 1293 341 1220 2.34e-54 209
Msa0689860 AT3G13100.2 29.915 234 145 4 1066 1296 378 595 1.86e-20 99.0
Msa0689860 AT1G30410.1 22.958 906 634 23 419 1304 611 1472 6.98e-54 207
Msa0689860 AT1G30410.1 29.960 247 146 6 1051 1293 609 832 6.38e-23 107
Msa0689860 AT1G30410.5 22.958 906 634 23 419 1304 493 1354 7.76e-54 207
Msa0689860 AT1G30410.5 29.960 247 146 6 1051 1293 491 714 6.34e-23 107
Msa0689860 AT1G30410.2 22.958 906 634 23 419 1304 608 1469 7.98e-54 207
Msa0689860 AT1G30410.2 29.960 247 146 6 1051 1293 606 829 6.76e-23 107
Msa0689860 AT1G30410.6 22.958 906 634 23 419 1304 608 1469 7.98e-54 207
Msa0689860 AT1G30410.6 29.960 247 146 6 1051 1293 606 829 6.76e-23 107
Msa0689860 AT1G30410.4 22.958 906 634 23 419 1304 608 1469 7.98e-54 207
Msa0689860 AT1G30410.4 29.960 247 146 6 1051 1293 606 829 6.76e-23 107
Msa0689860 AT3G13100.1 23.983 959 600 31 385 1293 586 1465 4.05e-51 199
Msa0689860 AT3G13100.1 29.661 236 147 4 1064 1296 621 840 1.53e-20 99.4
Msa0689860 AT5G39040.2 28.756 386 267 4 799 1182 132 511 5.47e-39 154
Msa0689860 AT5G39040.2 26.747 501 338 11 47 524 15 509 1.44e-31 131
Msa0689860 AT1G30410.3 21.734 796 560 22 419 1194 608 1360 1.66e-38 157
Msa0689860 AT1G30410.3 29.839 248 147 6 1050 1293 605 829 5.65e-23 107
Msa0689860 AT4G25450.2 50.000 150 73 1 1065 1212 468 617 1.79e-34 141
Msa0689860 AT4G25450.2 27.529 603 330 22 32 557 45 617 2.04e-27 120
Msa0689860 AT3G21250.4 31.967 244 152 5 1065 1303 1219 1453 1.27e-32 139
Msa0689860 AT3G21250.4 29.021 286 164 9 1020 1291 555 815 2.65e-22 105
Msa0689860 AT3G21250.4 29.876 241 147 7 424 648 1219 1453 1.37e-21 102
Msa0689860 AT3G21250.4 26.394 269 171 9 402 660 582 833 5.30e-20 97.8
Msa0689860 AT3G21250.2 31.967 244 152 5 1065 1303 1213 1447 1.43e-32 138
Msa0689860 AT3G21250.2 29.021 286 164 9 1020 1291 549 809 2.95e-22 105
Msa0689860 AT3G21250.2 29.876 241 147 7 424 648 1213 1447 1.50e-21 102
Msa0689860 AT3G21250.2 27.016 248 160 7 402 639 576 812 5.67e-20 97.4
Msa0689860 AT3G21250.5 31.967 244 152 5 1065 1303 1208 1442 1.53e-32 138
Msa0689860 AT3G21250.5 29.876 241 147 7 424 648 1208 1442 1.56e-21 102
Msa0689860 AT3G21250.5 28.671 286 154 10 1020 1291 555 804 1.03e-19 96.7
Msa0689860 AT3G21250.5 26.613 248 150 8 402 639 582 807 7.66e-17 87.4
Msa0689860 AT3G21250.1 31.967 244 152 5 1065 1303 1202 1436 1.73e-32 138
Msa0689860 AT3G21250.1 29.876 241 147 7 424 648 1202 1436 1.63e-21 102
Msa0689860 AT3G21250.1 28.671 286 154 10 1020 1291 549 798 1.01e-19 96.7
Msa0689860 AT3G21250.1 26.613 248 150 8 402 639 576 801 7.20e-17 87.4
Msa0689860 AT3G21250.6 31.967 244 152 5 1065 1303 797 1031 1.89e-32 137
Msa0689860 AT3G21250.6 29.021 286 164 9 1020 1291 133 393 4.86e-22 103
Msa0689860 AT3G21250.6 29.876 241 147 7 424 648 797 1031 1.63e-21 102
Msa0689860 AT3G21250.6 27.016 248 160 7 402 639 160 396 1.06e-19 96.3
Msa0689860 AT3G21250.3 31.967 244 152 5 1065 1303 797 1031 1.89e-32 137
Msa0689860 AT3G21250.3 29.021 286 164 9 1020 1291 133 393 4.86e-22 103
Msa0689860 AT3G21250.3 29.876 241 147 7 424 648 797 1031 1.63e-21 102
Msa0689860 AT3G21250.3 27.016 248 160 7 402 639 160 396 1.06e-19 96.3
Msa0689860 AT3G59140.1 27.985 268 183 5 1043 1304 1178 1441 2.31e-31 134
Msa0689860 AT3G59140.1 32.328 232 137 5 1069 1296 603 818 1.72e-23 108
Msa0689860 AT3G59140.1 29.297 256 159 6 422 661 1203 1452 6.91e-23 107
Msa0689860 AT3G59140.1 31.818 220 140 5 428 641 603 818 7.53e-21 100
Msa0689860 AT1G04120.3 25.251 499 313 16 823 1293 991 1457 3.98e-30 130
Msa0689860 AT1G04120.3 24.708 514 322 16 173 648 980 1466 1.69e-22 105
Msa0689860 AT1G04120.3 28.788 264 174 8 426 684 587 841 1.48e-21 102
Msa0689860 AT1G04120.3 28.114 281 181 5 1021 1296 539 803 4.30e-21 101
Msa0689860 AT3G60160.3 24.190 525 331 18 822 1315 976 1464 4.32e-30 130
Msa0689860 AT3G60160.3 33.184 223 129 4 443 649 1235 1453 2.84e-25 114
Msa0689860 AT3G60160.3 29.644 253 158 5 1045 1294 573 808 7.01e-22 103
Msa0689860 AT3G60160.3 31.179 263 163 6 386 639 555 808 1.17e-21 103
Msa0689860 AT3G60160.1 24.190 525 331 18 822 1315 1012 1500 4.57e-30 130
Msa0689860 AT3G60160.1 33.184 223 129 4 443 649 1271 1489 3.03e-25 114
Msa0689860 AT3G60160.1 29.644 253 158 5 1045 1294 609 844 6.96e-22 103
Msa0689860 AT3G60160.1 31.179 263 163 6 386 639 591 844 1.10e-21 103
Msa0689860 AT1G04120.1 25.251 499 313 16 823 1293 1026 1492 4.63e-30 130
Msa0689860 AT1G04120.1 31.667 240 147 4 423 648 1265 1501 2.05e-22 105
Msa0689860 AT1G04120.1 28.788 264 174 8 426 684 622 876 1.53e-21 102
Msa0689860 AT1G04120.1 28.114 281 181 5 1021 1296 574 838 4.35e-21 101
Msa0689860 AT3G13090.1 29.046 241 166 4 1064 1303 1216 1452 2.22e-29 128
Msa0689860 AT3G13090.1 30.901 233 142 4 1067 1296 601 817 2.20e-21 102
Msa0689860 AT3G13090.1 26.984 252 154 5 425 648 1203 1452 9.11e-21 100
Msa0689860 AT3G13090.1 29.897 291 186 7 359 641 537 817 4.32e-20 97.8
Msa0689860 AT3G60970.1 23.507 519 342 15 822 1315 559 1047 3.31e-29 127
Msa0689860 AT3G60970.1 30.380 237 146 4 1061 1294 208 428 1.06e-25 115
Msa0689860 AT3G60970.1 34.247 219 135 4 426 639 214 428 2.43e-25 114
Msa0689860 AT3G60970.1 32.735 223 130 4 443 649 818 1036 3.06e-24 111
Msa0689860 AT1G67940.1 30.806 211 135 4 1084 1290 44 247 5.73e-29 117
Msa0689860 AT1G67940.1 29.717 212 122 7 443 635 44 247 4.54e-19 89.4
Msa0689860 AT3G13080.1 23.848 499 324 14 821 1293 1025 1493 7.74e-29 126
Msa0689860 AT3G13080.1 28.333 240 153 6 424 648 1267 1502 8.48e-20 97.1
Msa0689860 AT3G13080.1 28.755 233 147 4 1067 1296 640 856 1.56e-18 92.8
Msa0689860 AT3G13080.1 32.749 171 101 5 493 659 708 868 9.36e-18 90.5
Msa0689860 AT1G04120.2 24.802 504 304 18 823 1293 1026 1487 1.66e-28 125
Msa0689860 AT1G04120.2 28.788 264 174 8 426 684 622 876 1.38e-21 102
Msa0689860 AT1G04120.2 28.114 281 181 5 1021 1296 574 838 4.02e-21 101
Msa0689860 AT1G04120.2 30.400 250 132 7 423 648 1265 1496 9.22e-21 100
Msa0689860 AT2G07680.6 30.165 242 156 6 1055 1293 1083 1314 9.08e-28 122
Msa0689860 AT2G07680.6 27.302 315 205 8 339 636 1005 1312 1.15e-20 99.8
Msa0689860 AT2G07680.6 31.557 244 157 8 388 626 448 686 4.33e-19 94.7
Msa0689860 AT2G07680.6 30.698 215 123 5 1086 1293 503 698 9.44e-19 93.6
Msa0689860 AT2G07680.3 30.165 242 156 6 1055 1293 1182 1413 1.16e-27 122
Msa0689860 AT2G07680.3 27.302 315 205 8 339 636 1104 1411 1.23e-20 99.8
Msa0689860 AT2G07680.3 31.557 244 157 8 388 626 547 785 4.39e-19 94.7
Msa0689860 AT2G07680.3 30.698 215 123 5 1086 1293 602 797 1.11e-18 93.2
Msa0689860 AT2G07680.1 30.165 242 156 6 1055 1293 1160 1391 1.27e-27 122
Msa0689860 AT2G07680.1 27.302 315 205 8 339 636 1082 1389 1.45e-20 99.4
Msa0689860 AT2G07680.1 31.557 244 157 8 388 626 525 763 5.21e-19 94.4
Msa0689860 AT2G07680.1 30.698 215 123 5 1086 1293 580 775 1.16e-18 93.2
Msa0689860 AT2G07680.5 30.165 242 156 6 1055 1293 1166 1397 1.28e-27 122
Msa0689860 AT2G07680.5 27.302 315 205 8 339 636 1088 1395 1.42e-20 99.4
Msa0689860 AT2G07680.5 31.557 244 157 8 388 626 531 769 5.44e-19 94.4
Msa0689860 AT2G07680.5 30.698 215 123 5 1086 1293 586 781 1.17e-18 93.2
Msa0689860 AT3G13080.5 23.711 485 314 13 821 1279 1025 1479 1.39e-27 122
Msa0689860 AT3G13080.5 29.167 216 135 5 424 624 1267 1479 4.84e-19 94.4
Msa0689860 AT3G13080.5 28.755 233 147 4 1067 1296 640 856 1.38e-18 93.2
Msa0689860 AT3G13080.5 32.749 171 101 5 493 659 708 868 9.51e-18 90.1
Msa0689860 AT2G07680.4 30.165 242 156 6 1055 1293 1157 1388 1.53e-27 122
Msa0689860 AT2G07680.4 27.302 315 205 8 339 636 1079 1386 1.70e-20 99.4
Msa0689860 AT2G07680.4 31.557 244 157 8 388 626 522 760 5.86e-19 94.4
Msa0689860 AT2G07680.4 30.698 215 123 5 1086 1293 577 772 1.44e-18 92.8
Msa0689860 AT1G30420.2 22.650 468 301 14 426 875 615 1039 9.08e-24 109
Msa0689860 AT1G30420.2 29.694 229 145 4 1067 1293 615 829 9.42e-23 106
Msa0689860 AT3G60160.2 29.644 253 158 5 1045 1294 609 844 4.77e-22 104
Msa0689860 AT3G60160.2 31.179 263 163 6 386 639 591 844 9.63e-22 103
Msa0689860 AT4G33460.1 27.468 233 132 9 1067 1285 40 249 6.76e-20 91.7
Msa0689860 AT4G33460.1 31.193 218 129 9 426 630 40 249 3.67e-14 74.7
Msa0689860 AT2G07680.2 31.557 244 157 8 388 626 547 785 3.52e-19 94.7
Msa0689860 AT2G07680.2 30.698 215 123 5 1086 1293 602 797 8.15e-19 93.6
Msa0689860 AT3G13080.3 28.755 233 147 4 1067 1296 640 856 8.39e-19 93.6
Msa0689860 AT3G13080.3 30.851 188 116 5 493 676 708 885 5.66e-18 90.9
Msa0689860 AT3G13080.4 28.755 233 147 4 1067 1296 640 856 8.39e-19 93.6
Msa0689860 AT3G13080.4 30.851 188 116 5 493 676 708 885 5.66e-18 90.9
Msa0689860 AT3G13080.2 28.755 233 147 4 1067 1296 640 856 1.47e-18 92.8
Msa0689860 AT3G13080.2 32.749 171 101 5 493 659 708 868 9.15e-18 90.5
Msa0689860 AT3G13080.2 27.434 226 148 5 424 648 1267 1477 6.26e-15 80.9
Msa0689860 AT1G71330.1 34.416 154 88 5 1174 1323 8 152 7.65e-16 80.9
Msa0689860 AT1G71330.1 33.333 138 82 4 539 672 25 156 1.82e-14 76.6
Msa0689860 AT5G19410.1 29.134 254 144 12 1058 1290 45 283 7.06e-15 80.1
Msa0689860 AT5G19410.1 29.224 219 128 6 443 635 66 283 5.56e-13 73.9
Msa0689860 AT5G19410.2 29.134 254 144 12 1058 1290 54 292 7.62e-15 80.1
Msa0689860 AT5G19410.2 29.224 219 128 6 443 635 75 292 5.26e-13 73.9
Msa0689860 AT4G39850.1 25.230 543 333 24 774 1277 143 651 2.30e-14 79.3
Msa0689860 AT4G39850.4 25.230 543 333 24 774 1277 143 651 2.30e-14 79.3
Msa0689860 AT4G39850.2 25.230 543 333 24 774 1277 143 651 2.40e-14 79.0
Msa0689860 AT3G47760.1 26.786 224 147 7 1076 1290 583 798 2.66e-14 78.6
Msa0689860 AT3G54540.2 29.832 238 125 8 420 634 490 708 2.71e-14 78.6
Msa0689860 AT3G54540.1 29.832 238 125 8 420 634 490 708 2.71e-14 78.6
Msa0689860 AT4G39850.3 24.954 545 332 24 774 1277 143 651 2.81e-14 79.0
Msa0689860 AT3G47760.2 26.786 224 147 7 1076 1290 593 808 2.94e-14 78.6
Msa0689860 AT3G47760.3 26.786 224 147 7 1076 1290 623 838 2.95e-14 78.6
Msa0689860 AT4G25750.1 27.751 209 132 7 1084 1286 30 225 4.45e-14 77.4
Msa0689860 AT5G61700.1 26.471 272 175 12 1045 1299 564 827 1.30e-13 76.6
Msa0689860 AT2G13610.1 24.194 248 169 8 1084 1323 62 298 5.67e-13 73.9
Msa0689860 AT2G41700.2 27.128 188 108 5 1086 1260 1433 1604 6.06e-13 74.7
Msa0689860 AT2G41700.1 27.128 188 108 5 1086 1260 1475 1646 6.14e-13 74.7
Msa0689860 AT5G52860.1 28.638 213 136 7 1078 1286 38 238 1.27e-12 72.8
Msa0689860 AT1G65410.1 27.660 235 122 10 1084 1285 99 318 1.31e-12 71.2
Msa0689860 AT1G65410.1 28.626 262 132 14 414 633 74 322 2.29e-11 67.4
Msa0689860 AT5G61700.2 27.468 233 146 10 1045 1261 564 789 1.80e-12 72.8
Msa0689860 AT5G61700.4 27.468 233 146 10 1045 1261 564 789 1.80e-12 72.8
Msa0689860 AT5G64840.1 26.147 218 136 6 1064 1279 422 616 2.11e-12 72.4
Msa0689860 AT5G06530.2 30.233 215 123 8 443 634 179 389 2.63e-12 72.0
Msa0689860 AT5G06530.1 30.233 215 123 8 443 634 179 389 2.63e-12 72.0
Msa0689860 AT5G06530.3 30.233 215 123 8 443 634 179 389 2.69e-12 72.0
Msa0689860 AT5G09930.1 25.322 233 150 6 1064 1294 408 618 4.44e-12 71.2
Msa0689860 AT5G61690.2 23.448 290 194 8 1041 1313 496 774 4.54e-12 71.6
Msa0689860 AT5G61740.3 25.893 224 154 9 1080 1299 465 680 4.72e-12 71.2
Msa0689860 AT5G61740.2 25.893 224 154 9 1080 1299 570 785 5.62e-12 71.2
Msa0689860 AT1G31770.1 28.826 281 167 13 375 630 14 286 5.72e-12 70.9
Msa0689860 AT5G61740.1 25.893 224 154 9 1080 1299 604 819 6.13e-12 70.9
Msa0689860 AT3G47780.1 26.396 197 129 7 1076 1264 622 810 1.64e-11 69.7
Msa0689860 AT3G47770.2 25.110 227 145 8 1088 1303 634 846 2.71e-11 68.9
Msa0689860 AT3G47770.1 25.110 227 145 8 1088 1303 608 820 2.79e-11 68.9
Msa0689860 AT3G47740.1 24.554 224 152 7 1076 1290 619 834 3.22e-11 68.6
Msa0689860 AT3G25620.2 25.893 224 150 8 1079 1292 94 311 3.29e-11 68.6
Msa0689860 AT3G21090.1 30.556 216 115 12 1080 1278 41 238 3.94e-11 68.2
Msa0689860 AT1G53390.1 26.316 247 154 10 1040 1265 469 708 4.26e-11 68.6
Msa0689860 AT1G53270.1 25.581 215 141 8 1084 1286 50 257 4.47e-11 67.8
Msa0689860 AT3G47790.1 22.951 244 169 8 1080 1311 602 838 5.02e-11 68.2
Msa0689860 AT3G47730.1 23.605 233 162 6 1086 1311 548 771 8.66e-11 67.4

Find 308 sgRNAs with CRISPR-Local

Find 470 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTATTTGGGCTTCTTCT+TGG 0.152755 4_4:+57124677 Msa0689860:CDS
GCTGATCTTGTTAACTCTTT+TGG 0.174323 4_4:+57124461 Msa0689860:CDS
TTAAAACTTTGAAGCTTAAA+TGG 0.198038 4_4:+57126366 Msa0689860:intron
GTTGGCAAGTTCCCTTTAAA+AGG 0.203853 4_4:-57124197 None:intergenic
GAAGAATTCCTAGCAATTAT+TGG 0.205923 4_4:-57128100 None:intergenic
TGGTTCCAATGCTAATAATT+TGG 0.208493 4_4:+57124481 Msa0689860:CDS
CTCCACTACAAAGGTGCTTT+TGG 0.219200 4_4:+57129061 Msa0689860:CDS
GCTTGGCTTATTGGAGTTAT+TGG 0.222973 4_4:-57130456 None:intergenic
CTCTTCTCCAAAGGTGAAAA+TGG 0.223752 4_4:+57127660 Msa0689860:CDS
TTGTGGTGGGTGCTGCTATT+TGG 0.235175 4_4:+57124665 Msa0689860:CDS
TCGGTCTTTGGTACGCTTCT+TGG 0.242607 4_4:+57129148 Msa0689860:CDS
CTTCTTATGCACTCGGTCTT+TGG 0.246945 4_4:+57129136 Msa0689860:CDS
CAGCTTGAGAAAGAGCTTCT+TGG 0.252336 4_4:-57125291 None:intergenic
GAAAGAGGACTACAACTTTC+TGG 0.252394 4_4:+57127393 Msa0689860:CDS
CATAAATAGTAGTGGCAAAT+AGG 0.255105 4_4:-57129650 None:intergenic
ATACATTGCAACATTTCTTC+TGG 0.255313 4_4:+57128467 Msa0689860:CDS
ACATACATACATTCTTTAAT+AGG 0.270477 4_4:-57130307 None:intergenic
TGTGGTGGGTGCTGCTATTT+GGG 0.277195 4_4:+57124666 Msa0689860:CDS
TTTGATTTACATAGAGGTTT+GGG 0.278609 4_4:+57125903 Msa0689860:intron
AAGATCAAGCCGGTTCCTTC+TGG 0.292489 4_4:+57128233 Msa0689860:CDS
CCCAGCTAGTTGTGTGGCCT+TGG 0.296196 4_4:-57128956 None:intergenic
AAGAATTCCTAGCAATTATT+GGG 0.296244 4_4:-57128099 None:intergenic
GTTATAAATGTGTATATATA+TGG 0.298301 4_4:-57130217 None:intergenic
TTTACACACAACGAGGTAAT+TGG 0.299463 4_4:+57130113 Msa0689860:CDS
AACTAAAGCTATGGTCTTTC+CGG 0.301547 4_4:-57126144 None:intergenic
ATTGCTAGGAATTCTTCTTA+TGG 0.305971 4_4:+57128106 Msa0689860:CDS
TGCTGTTTGGCAATTGGCTT+TGG 0.313487 4_4:+57125189 Msa0689860:CDS
CAGATTTCCGGAAGTGGATA+TGG 0.313984 4_4:+57129090 Msa0689860:CDS
TGCTATTTGGGCTTCTTCTT+GGG 0.318631 4_4:+57124678 Msa0689860:CDS
CAGAAACTTGGCTACAAAAC+TGG 0.319820 4_4:+57125637 Msa0689860:CDS
AGTAAAGCATAGAGCCATTC+AGG 0.320845 4_4:-57128277 None:intergenic
GGTGGTGGGGTGTGTGTTGT+TGG 0.328491 4_4:-57123850 None:intergenic
TGTTGCTGCTTCAATTATTT+CGG 0.329231 4_4:-57129709 None:intergenic
ATTCACTGCTGTTTGGCAAT+TGG 0.329446 4_4:+57125183 Msa0689860:CDS
ATATACACATTTATAACTAT+TGG 0.330277 4_4:+57130223 Msa0689860:three_prime_UTR
CCTTGGCATGAGCAGCTTCT+AGG 0.339552 4_4:-57128939 None:intergenic
AATCCTTCAATAAATTAATA+AGG 0.340306 4_4:-57130389 None:intergenic
AGTGCTCCTGCTGTTGGGTT+TGG 0.341305 4_4:+57124332 Msa0689860:CDS
CGGATCATGTGTTTGTGGTC+TGG 0.341954 4_4:-57128385 None:intergenic
GTTCCTATGATAGCTGTAAT+TGG 0.343100 4_4:+57125226 Msa0689860:CDS
TAGCCTATGTGCAACAATTA+TGG 0.349636 4_4:-57129961 None:intergenic
AGTTCAAGTTTCAAAGGAAA+TGG 0.353356 4_4:+57124268 Msa0689860:CDS
CAAGATGAGGATCAAGTATC+TGG 0.356151 4_4:+57124883 Msa0689860:CDS
TTGGAATTAGAGACAGTTAC+TGG 0.357007 4_4:+57126035 Msa0689860:CDS
GAGAGAGGCGTTCAACTCTC+TGG 0.357815 4_4:+57129792 Msa0689860:CDS
GAATGGCTCTATGCTTTACT+TGG 0.370633 4_4:+57128280 Msa0689860:CDS
ATTTGATTTACATAGAGGTT+TGG 0.371119 4_4:+57125902 Msa0689860:intron
ACCTGAGTTTCAAAGCCTTC+AGG 0.374147 4_4:-57126542 None:intergenic
ATAGATAGAAACAGTGAATC+TGG 0.381504 4_4:+57126011 Msa0689860:CDS
CAGATACTTGATCCTCATCT+TGG 0.381757 4_4:-57124882 None:intergenic
ATCTCAACCTGGTTTGCATC+AGG 0.382541 4_4:-57126470 None:intergenic
ACAGAGTTTCTTGCACTTGA+AGG 0.383228 4_4:-57128070 None:intergenic
GATTATATTCTAATGACAAT+TGG 0.384356 4_4:+57124383 Msa0689860:CDS
GGCAAAACTCTTGCCCTTGT+TGG 0.387716 4_4:+57129474 Msa0689860:CDS
AGCAGTACTTATCTATTTCT+CGG 0.391867 4_4:-57128405 None:intergenic
CAGCTCGGATTCGAAGATTA+AGG 0.392657 4_4:-57129452 None:intergenic
CATCCTTATTAATTTATTGA+AGG 0.397373 4_4:+57130386 Msa0689860:three_prime_UTR
GAGTAGTGTTGGCATTCGTT+GGG 0.397435 4_4:+57125569 Msa0689860:CDS
AGATTCTATGATCCAACTTC+AGG 0.399209 4_4:+57126211 Msa0689860:CDS
AATCAACACTGATGCTGTTA+TGG 0.403302 4_4:+57124973 Msa0689860:CDS
TACAGAAATGTGTCTTCTTA+AGG 0.403803 4_4:-57129610 None:intergenic
TACATTGCAACATTTCTTCT+GGG 0.404846 4_4:+57128468 Msa0689860:CDS
ATGTTCATGACTGGTTTCTC+TGG 0.404963 4_4:+57128913 Msa0689860:CDS
CTACCTCCCTTGATGAAATC+AGG 0.405171 4_4:-57129270 None:intergenic
CACATAGGCTATCAACTATC+AGG 0.405568 4_4:+57129973 Msa0689860:CDS
CACTGATGCTGTTATGGTTC+AGG 0.406866 4_4:+57124979 Msa0689860:CDS
TCATTGAGGATCAGAACTTC+AGG 0.407385 4_4:-57126101 None:intergenic
CTTATCCAAATTATTAGCAT+TGG 0.407692 4_4:-57124486 None:intergenic
TTAGCAAAGGGAATGGGATT+AGG 0.407692 4_4:+57125661 Msa0689860:CDS
GGAGTAGCATCTTGATCATC+TGG 0.408405 4_4:-57129342 None:intergenic
ATGCTTGTTGCTTGTACTGC+AGG 0.409562 4_4:+57128685 Msa0689860:CDS
ATTTCTTCTGGGATATTGTC+GGG 0.412021 4_4:+57128479 Msa0689860:CDS
ATCAGAACTTCAGGTCTTGA+TGG 0.413093 4_4:-57126092 None:intergenic
AGCTGGCAACATTGTAGAAC+AGG 0.413625 4_4:+57125309 Msa0689860:CDS
AAATGGTTGAGGCAACAAAT+AGG 0.413713 4_4:+57126383 Msa0689860:CDS
AGCTATTCCATATCCACTTC+CGG 0.416342 4_4:-57129097 None:intergenic
GCACTTGACCGGTTCATGAT+TGG 0.421277 4_4:+57127531 Msa0689860:CDS
TTAAGAGTGCTCCTGCTGTT+GGG 0.422543 4_4:+57124327 Msa0689860:CDS
ATTTATGAAAACATTGCATA+TGG 0.423042 4_4:+57129666 Msa0689860:CDS
TCATCTAACCTTCTCACTAA+TGG 0.426891 4_4:-57125005 None:intergenic
AGCCATTGGAGACCGAATTT+CGG 0.428911 4_4:+57128639 Msa0689860:CDS
TACTAGTCTCCAGAAGGAAC+CGG 0.430167 4_4:-57128242 None:intergenic
TATGCTTTACTTGGCTCAAT+CGG 0.430619 4_4:+57128289 Msa0689860:CDS
TCTGCACAATTACCGAAATT+CGG 0.430672 4_4:-57128651 None:intergenic
TCATCTAGGAGAAGAATTGC+TGG 0.430733 4_4:-57127462 None:intergenic
CTTTATGCTTCTTATGCACT+CGG 0.430869 4_4:+57129129 Msa0689860:CDS
TGGCAAACAAGGCAGGTTCT+TGG 0.432029 4_4:-57126415 None:intergenic
TTGAAGGTTGCTCAGAAACT+TGG 0.434185 4_4:+57125625 Msa0689860:CDS
ATTTGGGCTTCTTCTTGGGC+AGG 0.434829 4_4:+57124682 Msa0689860:CDS
AAAGGAAATGGAAGAACATA+AGG 0.435037 4_4:+57124280 Msa0689860:CDS
CTAATGACAATTGGAACTGT+TGG 0.436281 4_4:+57124392 Msa0689860:CDS
TACGCGCTTCTTCTGTGGTA+TGG 0.436549 4_4:+57125712 Msa0689860:CDS
TAAGGAAGATGGTGGAAGTA+AGG 0.436563 4_4:+57124298 Msa0689860:CDS
GTTAAGAGTGCTCCTGCTGT+TGG 0.437300 4_4:+57124326 Msa0689860:CDS
CGAGTAGTGTTGGCATTCGT+TGG 0.437818 4_4:+57125568 Msa0689860:CDS
GCACTAGACCGCGCTTCAAC+GGG 0.440037 4_4:+57129930 Msa0689860:CDS
TTTCTCGGATCATGTGTTTG+TGG 0.444348 4_4:-57128390 None:intergenic
TTAGTTGGTAGCAGCGGCTC+TGG 0.444983 4_4:+57126161 Msa0689860:CDS
CCTCCAATTACAGCTATCAT+AGG 0.445908 4_4:-57125229 None:intergenic
TGCAATGGCAAGTCCTCCAT+TGG 0.446546 4_4:-57125761 None:intergenic
GATCCGAGAAAATATACTCT+TGG 0.446939 4_4:+57126442 Msa0689860:CDS
CCGCGAAGACGGTCAGGAAC+AGG 0.449483 4_4:-57129363 None:intergenic
ACTGTTGGAGCAATTGTTCA+TGG 0.450437 4_4:+57124407 Msa0689860:CDS
GAGGTAATTGGTATGGCATC+TGG 0.450669 4_4:+57130125 Msa0689860:CDS
ACTTCACCGCGAAGACGGTC+AGG 0.451278 4_4:-57129369 None:intergenic
GATGACACAAGAAGTTGTTA+AGG 0.452491 4_4:+57124508 Msa0689860:CDS
AAGTTTCTGAGCAACCTTCA+AGG 0.453524 4_4:-57125623 None:intergenic
GCCAAGGCCACACAACTAGC+TGG 0.454947 4_4:+57128955 Msa0689860:CDS
CAATCTCGGTTTGACGGTCG+AGG 0.455780 4_4:-57129317 None:intergenic
TCCTGAAGGCTTTGAAACTC+AGG 0.456055 4_4:+57126541 Msa0689860:CDS
AAGTACTGCTACTTGTTGAT+TGG 0.457671 4_4:+57128418 Msa0689860:CDS
CTTGGTTGATTGTCGCTCTC+CGG 0.457886 4_4:-57124864 None:intergenic
ACAGTGGCTGCAACAACAAC+AGG 0.458475 4_4:-57128754 None:intergenic
GGGGAGTCGCGAGCACTTCA+AGG 0.458934 4_4:+57125589 Msa0689860:CDS
CATTTCTTCTGGGATATTGT+CGG 0.461400 4_4:+57128478 Msa0689860:CDS
CGCTGCTGAGACTTTAACAT+TGG 0.461760 4_4:+57129245 Msa0689860:CDS
GACGGATACAAAACATTTGT+AGG 0.463034 4_4:+57129768 Msa0689860:CDS
CTGGTTCAATCTCGGTTTGA+CGG 0.463216 4_4:-57129323 None:intergenic
AGGCTACTCATCAGCCTTGA+AGG 0.464598 4_4:+57125609 Msa0689860:CDS
AGGCATTCACACAACTACTT+TGG 0.467290 4_4:+57125249 Msa0689860:CDS
AAACTACTGAGCAATGGAAA+TGG 0.467564 4_4:+57124117 Msa0689860:CDS
TTGTTGGATTCACTGCTGTT+TGG 0.468939 4_4:+57125176 Msa0689860:CDS
TTGATCATCTGGTTCAATCT+CGG 0.469780 4_4:-57129331 None:intergenic
CTTTGAAGCTTAAATGGTTG+AGG 0.471738 4_4:+57126372 Msa0689860:intron
ATCATTATCCGGCCGGACGT+TGG 0.472720 4_4:-57129552 None:intergenic
CAGAGATTTCGTGCTGGATG+TGG 0.476171 4_4:+57124840 Msa0689860:intron
TGAAATGGCATGGTTTGATC+AGG 0.476906 4_4:+57128555 Msa0689860:CDS
CGCCAAGCTTATTAAGATGC+AGG 0.477182 4_4:+57127689 Msa0689860:CDS
CCTGTTCCTGACCGTCTTCG+CGG 0.477839 4_4:+57129363 Msa0689860:CDS
TAATGGCAGGTAGGAGAAAG+AGG 0.479130 4_4:+57127378 Msa0689860:intron
CAGGCTGGTGATCAATTATC+CGG 0.480189 4_4:-57125986 None:intergenic
AATGGCTGATCTGACATTGT+TGG 0.481285 4_4:-57128623 None:intergenic
TGACACCGAGGTTCGAACTT+CGG 0.481333 4_4:+57124937 Msa0689860:CDS
TCCGGCCGGATAATGATTGA+TGG 0.481881 4_4:+57129558 Msa0689860:CDS
TAGTGGAGTTTCAAGGTTGG+AGG 0.484244 4_4:-57129046 None:intergenic
ATCCGAGAAAATATACTCTT+GGG 0.485008 4_4:+57126443 Msa0689860:CDS
CTCCTGCATCTTAATAAGCT+TGG 0.486978 4_4:-57127691 None:intergenic
TCAGACAATCTACGCGAATA+CGG 0.487608 4_4:-57128136 None:intergenic
ATTCAGATTTGCTGATGGGT+TGG 0.487787 4_4:+57124361 Msa0689860:CDS
ACCTTTGTAGTGGAGTTTCA+AGG 0.488495 4_4:-57129053 None:intergenic
GTCCTCATGGTCTCTGCCAA+TGG 0.489711 4_4:+57129222 Msa0689860:CDS
ATGGCATATATTCCTGTAGC+TGG 0.495206 4_4:-57130198 None:intergenic
ACCATGTTTGCCGTCATGAT+TGG 0.497457 4_4:+57125784 Msa0689860:CDS
AAGGGACAGATTTCCGGAAG+TGG 0.498375 4_4:+57129084 Msa0689860:CDS
TAGAAACAGTGAATCTGGAT+TGG 0.498627 4_4:+57126016 Msa0689860:CDS
GGAACCGGCTTGATCTTTGA+AGG 0.501131 4_4:-57128227 None:intergenic
GGAAAGACCATAGCTTTAGT+TGG 0.502135 4_4:+57126146 Msa0689860:CDS
ACTGGATTAGCAAAGGGAAT+GGG 0.503168 4_4:+57125655 Msa0689860:CDS
GTACAGAAAATGTTCATGAC+TGG 0.504073 4_4:+57128904 Msa0689860:intron
AGAGAGGCGTTCAACTCTCT+GGG 0.504294 4_4:+57129793 Msa0689860:CDS
TTGGCAAGTTCCCTTTAAAA+GGG 0.504509 4_4:-57124196 None:intergenic
GGGGCAATCTGCACCGAGCA+TGG 0.505155 4_4:+57125923 Msa0689860:CDS
ACGGATACAAAACATTTGTA+GGG 0.506092 4_4:+57129769 Msa0689860:CDS
GGCACTAGACCGCGCTTCAA+CGG 0.506225 4_4:+57129929 Msa0689860:CDS
TAAAGTCTCAGCAGCGCCAT+TGG 0.507951 4_4:-57129238 None:intergenic
TGGAAATTTCATTCACTACA+TGG 0.508293 4_4:+57125132 Msa0689860:CDS
TTTCAAGGTTGGAGGCGAAA+AGG 0.508537 4_4:-57129038 None:intergenic
CTTGCTGAATCACGGCTACA+AGG 0.508539 4_4:-57127605 None:intergenic
GGCAGTGCTTAAGAATGAAA+TGG 0.508854 4_4:+57128540 Msa0689860:CDS
TTTGTAAATGCAGCCATGCT+CGG 0.510917 4_4:-57125936 None:intergenic
TTGTCCTGCCAATCATGAAC+CGG 0.510965 4_4:-57127539 None:intergenic
CAAGAAGCTCTTTCTCAAGC+TGG 0.512019 4_4:+57125292 Msa0689860:CDS
CGGATAATTGATCACCAGCC+TGG 0.514548 4_4:+57125987 Msa0689860:CDS
CAGCTTCTTCAATCTCAACC+TGG 0.516417 4_4:-57126481 None:intergenic
TTGACCGGTTCATGATTGGC+AGG 0.518216 4_4:+57127535 Msa0689860:CDS
CAACGAATGCCAACACTACT+CGG 0.519438 4_4:-57125567 None:intergenic
AACTGGATTAGCAAAGGGAA+TGG 0.520667 4_4:+57125654 Msa0689860:CDS
CTAGGAATTCTTCTTATGGC+CGG 0.521239 4_4:+57128110 Msa0689860:CDS
CTAATGAAAATACCAGCTAC+AGG 0.521471 4_4:+57130186 Msa0689860:three_prime_UTR
AGTTATTCAGATTTGCTGAT+GGG 0.523198 4_4:+57124357 Msa0689860:CDS
AGATGGTGGAAGTAAGGAGA+AGG 0.523726 4_4:+57124304 Msa0689860:CDS
GCAAATAGGCATGGCTCTTG+AGG 0.523872 4_4:-57129636 None:intergenic
AACAAAGAATAGCAATAGCA+AGG 0.524650 4_4:+57127424 Msa0689860:CDS
CTTGCCCTTGTTGGACCTAG+TGG 0.524811 4_4:+57129483 Msa0689860:CDS
ATGCACTTGTTGCCTCATCT+AGG 0.526072 4_4:-57127476 None:intergenic
CAGCTTTGCGAATTGTGGAC+AGG 0.526136 4_4:-57127581 None:intergenic
CTTGTTGGACCTAGTGGCTG+TGG 0.526551 4_4:+57129489 Msa0689860:CDS
TTGAGATTGAAGAAGCTGCT+AGG 0.526810 4_4:+57126486 Msa0689860:CDS
TACAAAACTGGATTAGCAAA+GGG 0.528896 4_4:+57125649 Msa0689860:CDS
TCGGATCGTGGTGGCAAACA+AGG 0.529983 4_4:-57126426 None:intergenic
GGGAAGGCCTGATGCAAACC+AGG 0.530277 4_4:+57126463 Msa0689860:CDS
AAGAAGAGTTAAGTGTGAAG+AGG 0.531090 4_4:+57124004 Msa0689860:five_prime_UTR
TTCCAAAAGCACCTTTGTAG+TGG 0.534331 4_4:-57129063 None:intergenic
CCAAGGCCACACAACTAGCT+GGG 0.535348 4_4:+57128956 Msa0689860:CDS
ATCGTGGTGGCAAACAAGGC+AGG 0.535375 4_4:-57126422 None:intergenic
GAATCAAGTTCAAGTTTCAA+AGG 0.535649 4_4:+57124262 Msa0689860:CDS
TCCATCAATCATTATCCGGC+CGG 0.540112 4_4:-57129559 None:intergenic
TTCATCATCAAACTTCCTGA+AGG 0.541079 4_4:+57126527 Msa0689860:CDS
CGCGCATGATTCAATTACAA+AGG 0.541319 4_4:+57130090 Msa0689860:CDS
AGATGAGGCAACAAGTGCAT+TGG 0.543761 4_4:+57127479 Msa0689860:CDS
ATCTACGCGAATACGGTGAC+CGG 0.544334 4_4:-57128129 None:intergenic
GCTGTTACGCGCTTCTTCTG+TGG 0.544939 4_4:+57125707 Msa0689860:CDS
CTTAATCTTCGAATCCGAGC+TGG 0.545900 4_4:+57129453 Msa0689860:CDS
TGAGATTGAAGAAGCTGCTA+GGG 0.546562 4_4:+57126487 Msa0689860:CDS
AAAGCTATGGTCTTTCCGGC+AGG 0.547741 4_4:-57126140 None:intergenic
ACACCTTCTTCTGTTACTGT+TGG 0.547835 4_4:-57124215 None:intergenic
AACCGGCATATCTGGTCTAG+TGG 0.548069 4_4:-57129421 None:intergenic
ACCAATCATGACGGCAAACA+TGG 0.548224 4_4:-57125785 None:intergenic
CGAGCTTATGCTTCTTGACG+AGG 0.549854 4_4:+57129863 Msa0689860:CDS
AACTCTCCAAACCCAACAGC+AGG 0.550111 4_4:-57124338 None:intergenic
TTCTCCTTGAGTGTTCCTGC+CGG 0.550414 4_4:+57126125 Msa0689860:CDS
AGATTCTATGATCCAACGTC+CGG 0.550556 4_4:+57129540 Msa0689860:CDS
TTCGTCTCTTGGTCATGTTG+AGG 0.550602 4_4:-57130156 None:intergenic
AACACTTCCTTGCTGAATCA+CGG 0.550760 4_4:-57127613 None:intergenic
ATTGGCTCCTGATTTCATCA+AGG 0.550974 4_4:+57129263 Msa0689860:CDS
AAGGTCAGCTTTGCGAATTG+TGG 0.551310 4_4:-57127586 None:intergenic
TCAATCGGTTCAATTGTTTG+TGG 0.551900 4_4:+57128304 Msa0689860:CDS
ATGTTTGCCGTCATGATTGG+TGG 0.555216 4_4:+57125787 Msa0689860:CDS
ATGGAAGAACATAAGGAAGA+TGG 0.556428 4_4:+57124287 Msa0689860:CDS
GAGTTATTCAGATTTGCTGA+TGG 0.556950 4_4:+57124356 Msa0689860:CDS
GAGATCAAAGACTGATCTCA+TGG 0.557507 4_4:-57129295 None:intergenic
GACGGCAAACATGGTTGCAA+TGG 0.558689 4_4:-57125776 None:intergenic
TAGTGCAAGAAGCACTTGAC+CGG 0.558832 4_4:+57127520 Msa0689860:CDS
TTAGCTCCCCAATAATTGCT+AGG 0.560278 4_4:+57128092 Msa0689860:CDS
TTGGCTCCTGATTTCATCAA+GGG 0.560687 4_4:+57129264 Msa0689860:CDS
AAAACATTTGTAGGGGAGAG+AGG 0.560719 4_4:+57129777 Msa0689860:CDS
ATCAGAGAGATCAGTTCAAG+AGG 0.562142 4_4:+57129908 Msa0689860:CDS
ATTTCGTGCTGGATGTGGAC+CGG 0.562324 4_4:+57124845 Msa0689860:CDS
TGCTTAAGAATGAAATGGCA+TGG 0.567174 4_4:+57128545 Msa0689860:CDS
CCATGAGGACCATGAAAACT+CGG 0.568995 4_4:-57129209 None:intergenic
TCTATGATCCAACGTCCGGC+CGG 0.570134 4_4:+57129544 Msa0689860:CDS
TCAGGATGCCATTAGTGAGA+AGG 0.570898 4_4:+57124997 Msa0689860:CDS
TGTTTCTATCTATACCAGGC+TGG 0.571016 4_4:-57126001 None:intergenic
CATGATGAGCTCTTCTCCAA+AGG 0.572706 4_4:+57127651 Msa0689860:CDS
ACACAACGAGGTAATTGGTA+TGG 0.573688 4_4:+57130118 Msa0689860:CDS
CTACAAAACTGGATTAGCAA+AGG 0.573907 4_4:+57125648 Msa0689860:CDS
TGTGTCTTCTTAAGGACTTG+AGG 0.575773 4_4:-57129602 None:intergenic
CTCGTCAAGAAGCATAAGCT+CGG 0.578397 4_4:-57129862 None:intergenic
CAAGTTCATATCATCTCTAC+CGG 0.578545 4_4:+57129746 Msa0689860:CDS
TACCGAAATTCGGTCTCCAA+TGG 0.580566 4_4:-57128641 None:intergenic
AACAATGTCAGATCAGCCAT+TGG 0.580758 4_4:+57128625 Msa0689860:CDS
CCTATGATAGCTGTAATTGG+AGG 0.581141 4_4:+57125229 Msa0689860:CDS
CACAGCCACTAGGTCCAACA+AGG 0.581203 4_4:-57129488 None:intergenic
TTGCCAACAGTAACAGAAGA+AGG 0.581599 4_4:+57124212 Msa0689860:CDS
GGTATGGAGGCTATCTTGTA+CGG 0.581612 4_4:+57125728 Msa0689860:CDS
GCTGCTACCAACTAAAGCTA+TGG 0.582317 4_4:-57126153 None:intergenic
GTTCAACTTCACCGCGAAGA+CGG 0.583316 4_4:-57129374 None:intergenic
GGCTGCAACAGTTCTTACAT+TGG 0.583625 4_4:-57128989 None:intergenic
AAAATGCTATGAATAATGCT+AGG 0.583912 4_4:+57127724 Msa0689860:CDS
TCCCACTAGACCAGATATGC+CGG 0.585198 4_4:+57129419 Msa0689860:CDS
ACCGGCATATCTGGTCTAGT+GGG 0.585418 4_4:-57129420 None:intergenic
GTGATTGCTGTGATTGATGA+TGG 0.588354 4_4:+57130005 Msa0689860:CDS
ACAAAGAATAGCAATAGCAA+GGG 0.593074 4_4:+57127425 Msa0689860:CDS
TGTGCAAATCCGAGTAGTGT+TGG 0.593477 4_4:+57125558 Msa0689860:CDS
GCGCTTCTTCTGTGGTATGG+AGG 0.593512 4_4:+57125715 Msa0689860:CDS
TTGTAGTGGAGTTTCAAGGT+TGG 0.595028 4_4:-57129049 None:intergenic
AGTAGTGTTGGCATTCGTTG+GGG 0.596348 4_4:+57125570 Msa0689860:CDS
TCACTGTTTCTATCTATACC+AGG 0.596634 4_4:-57126005 None:intergenic
TGAAGTTGAACTTAAGCATG+TGG 0.597667 4_4:+57129386 Msa0689860:CDS
GAAGAACATAAGGAAGATGG+TGG 0.598635 4_4:+57124290 Msa0689860:CDS
CCTAGAAGCTGCTCATGCCA+AGG 0.602266 4_4:+57128939 Msa0689860:CDS
TAGTGGCTGTGGTAAGAGCT+CGG 0.603045 4_4:+57129500 Msa0689860:CDS
TTGTTGCAGAGATTTCGTGC+TGG 0.605791 4_4:+57124834 Msa0689860:intron
GCTTCTTGGCTAGTGAAACA+TGG 0.608641 4_4:+57129162 Msa0689860:CDS
AATGGCATGGTTTGATCAGG+AGG 0.608897 4_4:+57128558 Msa0689860:CDS
GGCCACACAACTAGCTGGGG+AGG 0.609270 4_4:+57128960 Msa0689860:CDS
TTTCTTCTGGGATATTGTCG+GGG 0.609370 4_4:+57128480 Msa0689860:CDS
ATTTACAAAGGCTAGAGTTG+CGG 0.609395 4_4:+57125950 Msa0689860:CDS
CGCCATTGGCAGAGACCATG+AGG 0.610788 4_4:-57129224 None:intergenic
GAGCTCTTACCACAGCCACT+AGG 0.612470 4_4:-57129498 None:intergenic
AACATGAGAGCAGAAAGAGC+AGG 0.613878 4_4:+57123956 Msa0689860:five_prime_UTR
ATCAATCACAGCAATCACAT+TGG 0.614062 4_4:-57130000 None:intergenic
CTTGCCTTCAAAGATCAAGC+CGG 0.614462 4_4:+57128223 Msa0689860:CDS
CAACCATAATTGTTGCACAT+AGG 0.615376 4_4:+57129958 Msa0689860:CDS
AGGACATGAAAAGAAAGAGT+AGG 0.615680 4_4:-57130287 None:intergenic
ATAGTAGTGGCAAATAGGCA+TGG 0.617788 4_4:-57129645 None:intergenic
TGGAAATGGTCTGAAATGCA+AGG 0.618363 4_4:+57124131 Msa0689860:CDS
AGAATTCCTAGCAATTATTG+GGG 0.620185 4_4:-57128098 None:intergenic
CTTTCCGGCAGGAACACTCA+AGG 0.622262 4_4:-57126129 None:intergenic
AAATAGCAGCACCCACCACA+AGG 0.623591 4_4:-57124663 None:intergenic
AACATCCGAAGTTCGAACCT+CGG 0.625651 4_4:-57124942 None:intergenic
CTGCAGGCTTTGTGTTGCAG+TGG 0.625750 4_4:+57128701 Msa0689860:CDS
TTCATATCATCTCTACCGGA+CGG 0.629537 4_4:+57129750 Msa0689860:CDS
AGCAATTCTTCTCCTAGATG+AGG 0.631803 4_4:+57127464 Msa0689860:CDS
CTTGTAGCCGTGATTCAGCA+AGG 0.632577 4_4:+57127606 Msa0689860:CDS
AGCCTCCCCAGCTAGTTGTG+TGG 0.634445 4_4:-57128962 None:intergenic
TTGATTTACATAGAGGTTTG+GGG 0.634945 4_4:+57125904 Msa0689860:intron
AAAATCTTACGAAACGTGTG+AGG 0.635295 4_4:+57128503 Msa0689860:CDS
ATGCTAGGAAGAGTAGTGCA+AGG 0.637762 4_4:+57127739 Msa0689860:CDS
GCTCCTGATTTCATCAAGGG+AGG 0.637925 4_4:+57129267 Msa0689860:CDS
ATAGCTTTAGTTGGTAGCAG+CGG 0.639142 4_4:+57126155 Msa0689860:CDS
ACCTTGAAACTCCACTACAA+AGG 0.639466 4_4:+57129052 Msa0689860:CDS
TATCATAGGAACAACAGCAA+GGG 0.639742 4_4:-57125215 None:intergenic
GAGAAAATATACTCTTGGGA+AGG 0.641391 4_4:+57126447 Msa0689860:CDS
AGCGACAATCAACCAAGATG+AGG 0.641823 4_4:+57124870 Msa0689860:CDS
CTATCATAGGAACAACAGCA+AGG 0.644099 4_4:-57125216 None:intergenic
GTACGGCATCACGAAACCAA+TGG 0.644301 4_4:+57125745 Msa0689860:CDS
AGAGGACTACAACTTTCTGG+AGG 0.648947 4_4:+57127396 Msa0689860:CDS
GATGGTAAAGTAGCTGAGCA+AGG 0.656353 4_4:+57130023 Msa0689860:CDS
CACTCAAGGAGAAATCATTG+AGG 0.657827 4_4:-57126115 None:intergenic
CAAGCTTATTAAGATGCAGG+AGG 0.664257 4_4:+57127692 Msa0689860:CDS
CAAGGCCACACAACTAGCTG+GGG 0.666253 4_4:+57128957 Msa0689860:CDS
TCACATTCCACCAATCATGA+CGG 0.669315 4_4:-57125794 None:intergenic
GAGCATGGCTGCATTTACAA+AGG 0.670088 4_4:+57125938 Msa0689860:CDS
CGGATACAAAACATTTGTAG+GGG 0.673971 4_4:+57129770 Msa0689860:CDS
GAGGACTACAACTTTCTGGA+GGG 0.676646 4_4:+57127397 Msa0689860:CDS
AAAACAAACCTGCAAAACAG+TGG 0.677101 4_4:-57128770 None:intergenic
TGTGAGGGAGAAAATGCTGA+CGG 0.679884 4_4:+57128519 Msa0689860:CDS
AGAGTGCTAGAATTTCTGCA+AGG 0.683229 4_4:+57128587 Msa0689860:CDS
CGGCATCACGAAACCAATGG+AGG 0.684436 4_4:+57125748 Msa0689860:CDS
AAATCTTACGAAACGTGTGA+GGG 0.686920 4_4:+57128504 Msa0689860:CDS
TATTGAATTCTTTGACACCG+AGG 0.688796 4_4:+57124925 Msa0689860:CDS
GAGAGGCGTTCAACTCTCTG+GGG 0.690709 4_4:+57129794 Msa0689860:CDS
AGAGGCGTTCAACTCTCTGG+GGG 0.698930 4_4:+57129795 Msa0689860:CDS
CAACAGGAAATACAGCAATG+AGG 0.716579 4_4:-57128738 None:intergenic
ACAAAGGTTTACACACAACG+AGG 0.733722 4_4:+57130106 Msa0689860:CDS
ACAGCCACTAGGTCCAACAA+GGG 0.752505 4_4:-57129487 None:intergenic
CTGGATTGTAGTAGACACTG+AGG 0.761606 4_4:-57128366 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATTAATTTTTTTTTAA+TGG + chr4_4:57127361-57127380 Msa0689860:intron 0.0%
!!! TTTAATTTTCAAATGTTTAA+TGG + chr4_4:57124790-57124809 Msa0689860:intron 10.0%
!! AAGTATATAAAAATAATTAC+TGG + chr4_4:57126747-57126766 Msa0689860:intron 10.0%
!!! GAAAATAGTAATATTTTTTT+TGG - chr4_4:57127971-57127990 None:intergenic 10.0%
!!! TTGAATTTAAATTTTTAGGA+TGG + chr4_4:57126635-57126654 Msa0689860:intron 15.0%
!! TTTAAAAAAAAATGCTTCTA+TGG - chr4_4:57126663-57126682 None:intergenic 15.0%
!!! AATTATTTTTATATACTTCG+CGG - chr4_4:57126745-57126764 None:intergenic 15.0%
!! ATATATTTCAGAGATTAAAT+TGG + chr4_4:57126914-57126933 Msa0689860:intron 15.0%
!! GCTAAATAAAAAAAAAAACT+TGG + chr4_4:57126989-57127008 Msa0689860:intron 15.0%
!! TACGATAATTTAATTGAAAA+TGG + chr4_4:57127318-57127337 Msa0689860:intron 15.0%
!!! ATTAATTTTTTTTTAATGGC+AGG + chr4_4:57127365-57127384 Msa0689860:intron 15.0%
!! GTTATAAATGTGTATATATA+TGG - chr4_4:57130220-57130239 None:intergenic 15.0%
!! ATATACACATTTATAACTAT+TGG + chr4_4:57130223-57130242 Msa0689860:three_prime_UTR 15.0%
!! AATCCTTCAATAAATTAATA+AGG - chr4_4:57130392-57130411 None:intergenic 15.0%
!! GATTATATTCTAATGACAAT+TGG + chr4_4:57124383-57124402 Msa0689860:CDS 20.0%
!!! TTTTAATTGGATTCTTTTTG+TGG + chr4_4:57124584-57124603 Msa0689860:intron 20.0%
!!! TCGATTTCAATTTTTTCAAT+TGG - chr4_4:57124719-57124738 None:intergenic 20.0%
!!! ATTTGATTTGATTTACATAG+AGG + chr4_4:57125897-57125916 Msa0689860:intron 20.0%
!! TTTAAAAATTTACCTGAAGT+TGG - chr4_4:57126226-57126245 None:intergenic 20.0%
!!! TTAAAACTTTGAAGCTTAAA+TGG + chr4_4:57126366-57126385 Msa0689860:intron 20.0%
!! TCATAAAATCTCTAATCTAT+AGG + chr4_4:57127233-57127252 Msa0689860:intron 20.0%
!!! ATTATTCATAGCATTTTCAT+GGG - chr4_4:57127721-57127740 None:intergenic 20.0%
!!! AATGTTTTCATAAATAGTAG+TGG - chr4_4:57129661-57129680 None:intergenic 20.0%
!! ATTTATGAAAACATTGCATA+TGG + chr4_4:57129666-57129685 Msa0689860:CDS 20.0%
!! ACATACATACATTCTTTAAT+AGG - chr4_4:57130310-57130329 None:intergenic 20.0%
!!! TCATTTGTCATTAATTTTCT+TGG - chr4_4:57130357-57130376 None:intergenic 20.0%
!! CATCCTTATTAATTTATTGA+AGG + chr4_4:57130386-57130405 Msa0689860:three_prime_UTR 20.0%
!!! TAATAGTTTGTTTTGTGTGA+TGG - chr4_4:57123874-57123893 None:intergenic 25.0%
! AAATAAAAACTACTGAGCAA+TGG + chr4_4:57124111-57124130 Msa0689860:CDS 25.0%
! CTTATCCAAATTATTAGCAT+TGG - chr4_4:57124489-57124508 None:intergenic 25.0%
!! TTTAATGGATGATTGAAAGA+AGG + chr4_4:57124805-57124824 Msa0689860:intron 25.0%
!!! TTTGTTATTGATATTGCAGA+CGG + chr4_4:57125534-57125553 Msa0689860:intron 25.0%
!! ATTTGATTTACATAGAGGTT+TGG + chr4_4:57125902-57125921 Msa0689860:intron 25.0%
!! TTTGATTTACATAGAGGTTT+GGG + chr4_4:57125903-57125922 Msa0689860:intron 25.0%
!!! TTGAAGTTTTATGTTAGTAG+TGG + chr4_4:57126281-57126300 Msa0689860:intron 25.0%
! ATTACATTGTTCCGAAAATT+TGG + chr4_4:57126311-57126330 Msa0689860:intron 25.0%
! ACAGATTTCACATACTTTAA+AGG - chr4_4:57126773-57126792 None:intergenic 25.0%
! TGATGTCTTGACTATTAATT+TGG + chr4_4:57127087-57127106 Msa0689860:intron 25.0%
!! ATTGATGAATAACTTTTCTG+TGG - chr4_4:57127214-57127233 None:intergenic 25.0%
!! CAAAGTTTATTTAGAGTTCT+GGG - chr4_4:57127274-57127293 None:intergenic 25.0%
!! TCAAAGTTTATTTAGAGTTC+TGG - chr4_4:57127275-57127294 None:intergenic 25.0%
! AATAAACTTTGAATCAGATG+TGG + chr4_4:57127283-57127302 Msa0689860:intron 25.0%
!!! ATTTTTTTTTAATGGCAGGT+AGG + chr4_4:57127369-57127388 Msa0689860:intron 25.0%
!! CATTATTCATAGCATTTTCA+TGG - chr4_4:57127722-57127741 None:intergenic 25.0%
! AAAATGCTATGAATAATGCT+AGG + chr4_4:57127724-57127743 Msa0689860:CDS 25.0%
! AGGTAAATAAAGTGTAACTA+AGG - chr4_4:57127891-57127910 None:intergenic 25.0%
! ATAAGATGAACTTGAAACAT+TGG - chr4_4:57127995-57128014 None:intergenic 25.0%
!! TACATGACATTTTTATATGC+AGG + chr4_4:57128047-57128066 Msa0689860:intron 25.0%
! AAGAATTCCTAGCAATTATT+GGG - chr4_4:57128102-57128121 None:intergenic 25.0%
! TGTACAAAACACAAAACAAT+TGG - chr4_4:57128889-57128908 None:intergenic 25.0%
!! AATTTTCGATTCTGAATTGA+AGG - chr4_4:57129013-57129032 None:intergenic 25.0%
! GAATCAAGTTCAAGTTTCAA+AGG + chr4_4:57124262-57124281 Msa0689860:CDS 30.0%
! AGTTCAAGTTTCAAAGGAAA+TGG + chr4_4:57124268-57124287 Msa0689860:CDS 30.0%
AAAGGAAATGGAAGAACATA+AGG + chr4_4:57124280-57124299 Msa0689860:CDS 30.0%
!! AGTTATTCAGATTTGCTGAT+GGG + chr4_4:57124357-57124376 Msa0689860:CDS 30.0%
GCAAAGAATCTAAGAAAAAG+AGG - chr4_4:57124443-57124462 None:intergenic 30.0%
TGGTTCCAATGCTAATAATT+TGG + chr4_4:57124481-57124500 Msa0689860:CDS 30.0%
TGGAAATTTCATTCACTACA+TGG + chr4_4:57125132-57125151 Msa0689860:CDS 30.0%
!!! TTTGTTTCTGGTTTTGTTGT+TGG + chr4_4:57125160-57125179 Msa0689860:CDS 30.0%
!! TTAGTATGTTTTTGTCCATG+AGG + chr4_4:57125385-57125404 Msa0689860:intron 30.0%
!! TAGCCATTTTACAATCATCA+CGG - chr4_4:57125460-57125479 None:intergenic 30.0%
GATTGAGAGAGATTATAAAG+CGG - chr4_4:57125489-57125508 None:intergenic 30.0%
!! TACAAAACTGGATTAGCAAA+GGG + chr4_4:57125649-57125668 Msa0689860:CDS 30.0%
TTGATTTACATAGAGGTTTG+GGG + chr4_4:57125904-57125923 Msa0689860:intron 30.0%
ATAGATAGAAACAGTGAATC+TGG + chr4_4:57126011-57126030 Msa0689860:CDS 30.0%
! ACTTGTTGAACTGAAAAATG+TGG + chr4_4:57126058-57126077 Msa0689860:CDS 30.0%
ATCCGAGAAAATATACTCTT+GGG + chr4_4:57126443-57126462 Msa0689860:CDS 30.0%
!! TTCCCAAGAGTATATTTTCT+CGG - chr4_4:57126448-57126467 None:intergenic 30.0%
! TACTTTAGGGACAAAATTGA+TGG - chr4_4:57126701-57126720 None:intergenic 30.0%
! GCAGTTTTCATATACTCTTA+GGG + chr4_4:57126870-57126889 Msa0689860:intron 30.0%
! CAGTTTTCATATACTCTTAG+GGG + chr4_4:57126871-57126890 Msa0689860:intron 30.0%
TTTCAGAGATTAAATTGGAG+TGG + chr4_4:57126919-57126938 Msa0689860:intron 30.0%
TAAATTGGAGTGGTATTCTA+AGG + chr4_4:57126929-57126948 Msa0689860:intron 30.0%
ACTTGGATATAACAGAAAAG+AGG + chr4_4:57127006-57127025 Msa0689860:intron 30.0%
TAACAGAATAGTAACAGTTG+TGG - chr4_4:57127043-57127062 None:intergenic 30.0%
TATCAATGTATACAGAAACG+TGG + chr4_4:57127064-57127083 Msa0689860:intron 30.0%
TAAAAAACATTTCCTGCTTC+AGG - chr4_4:57127118-57127137 None:intergenic 30.0%
TGTGCTTGTGATAAACAATA+AGG + chr4_4:57127187-57127206 Msa0689860:intron 30.0%
AACAAAGAATAGCAATAGCA+AGG + chr4_4:57127424-57127443 Msa0689860:CDS 30.0%
ACAAAGAATAGCAATAGCAA+GGG + chr4_4:57127425-57127444 Msa0689860:CDS 30.0%
!!! CAAGGAAGTGTTTTTGAAAT+TGG + chr4_4:57127624-57127643 Msa0689860:CDS 30.0%
AGAATTCCTAGCAATTATTG+GGG - chr4_4:57128101-57128120 None:intergenic 30.0%
GAAGAATTCCTAGCAATTAT+TGG - chr4_4:57128103-57128122 None:intergenic 30.0%
ATTGCTAGGAATTCTTCTTA+TGG + chr4_4:57128106-57128125 Msa0689860:CDS 30.0%
! AGCTTTTCATGCTTGTAATT+TGG - chr4_4:57128205-57128224 None:intergenic 30.0%
TAAAAATGAACTCTCCTGAA+TGG + chr4_4:57128263-57128282 Msa0689860:CDS 30.0%
! AGCAGTACTTATCTATTTCT+CGG - chr4_4:57128408-57128427 None:intergenic 30.0%
ATACATTGCAACATTTCTTC+TGG + chr4_4:57128467-57128486 Msa0689860:CDS 30.0%
TACATTGCAACATTTCTTCT+GGG + chr4_4:57128468-57128487 Msa0689860:CDS 30.0%
! GTTTTATACCATCTTCTTTC+AGG + chr4_4:57128788-57128807 Msa0689860:intron 30.0%
TATTCAACTCTGTTTCACTT+AGG + chr4_4:57128820-57128839 Msa0689860:intron 30.0%
ATTCAACTCTGTTTCACTTA+GGG + chr4_4:57128821-57128840 Msa0689860:intron 30.0%
TCAAATAAACCAATCCAAAC+AGG - chr4_4:57128847-57128866 None:intergenic 30.0%
! TAAAACAATCCGAGTTTTCA+TGG + chr4_4:57129200-57129219 Msa0689860:CDS 30.0%
! CTTTTCCATCAATCATTATC+CGG - chr4_4:57129566-57129585 None:intergenic 30.0%
TACAGAAATGTGTCTTCTTA+AGG - chr4_4:57129613-57129632 None:intergenic 30.0%
CATAAATAGTAGTGGCAAAT+AGG - chr4_4:57129653-57129672 None:intergenic 30.0%
! TGTTGCTGCTTCAATTATTT+CGG - chr4_4:57129712-57129731 None:intergenic 30.0%
ACGGATACAAAACATTTGTA+GGG + chr4_4:57129769-57129788 Msa0689860:CDS 30.0%
!! ACAGTTGATGAAAAATCATC+AGG + chr4_4:57130055-57130074 Msa0689860:CDS 30.0%
TTGATGAAAAATCATCAGGA+TGG + chr4_4:57130059-57130078 Msa0689860:CDS 30.0%
TGATGAAAAATCATCAGGAT+GGG + chr4_4:57130060-57130079 Msa0689860:CDS 30.0%
! TTAGATTTTTCTTCGTCTCT+TGG - chr4_4:57130170-57130189 None:intergenic 30.0%
!!! TAGTTTGTTTTGTGTGATGG+TGG - chr4_4:57123871-57123890 None:intergenic 35.0%
AAGAAGAGTTAAGTGTGAAG+AGG + chr4_4:57124004-57124023 Msa0689860:five_prime_UTR 35.0%
!! TGTGAAGAGGTTGTTTTGTT+GGG + chr4_4:57124017-57124036 Msa0689860:five_prime_UTR 35.0%
AAACTACTGAGCAATGGAAA+TGG + chr4_4:57124117-57124136 Msa0689860:CDS 35.0%
! TCTTCTTCTGACCCTTTTAA+AGG + chr4_4:57124185-57124204 Msa0689860:CDS 35.0%
! CTTCTTCTGACCCTTTTAAA+GGG + chr4_4:57124186-57124205 Msa0689860:CDS 35.0%
! TTGGCAAGTTCCCTTTAAAA+GGG - chr4_4:57124199-57124218 None:intergenic 35.0%
ATGGAAGAACATAAGGAAGA+TGG + chr4_4:57124287-57124306 Msa0689860:CDS 35.0%
!! GAGTTATTCAGATTTGCTGA+TGG + chr4_4:57124356-57124375 Msa0689860:CDS 35.0%
CTAATGACAATTGGAACTGT+TGG + chr4_4:57124392-57124411 Msa0689860:CDS 35.0%
! GCTGATCTTGTTAACTCTTT+TGG + chr4_4:57124461-57124480 Msa0689860:CDS 35.0%
GATGACACAAGAAGTTGTTA+AGG + chr4_4:57124508-57124527 Msa0689860:CDS 35.0%
! GGATTCTTTTTGTGGAAAGT+AGG + chr4_4:57124592-57124611 Msa0689860:intron 35.0%
AAGTAGGTGTGAATTGTTTG+AGG + chr4_4:57124608-57124627 Msa0689860:intron 35.0%
! GTATGCATTTTACTTCCTTG+TGG + chr4_4:57124648-57124667 Msa0689860:intron 35.0%
ATGGATGATTGAAAGAAGGT+TGG + chr4_4:57124809-57124828 Msa0689860:intron 35.0%
TATTGAATTCTTTGACACCG+AGG + chr4_4:57124925-57124944 Msa0689860:CDS 35.0%
AATCAACACTGATGCTGTTA+TGG + chr4_4:57124973-57124992 Msa0689860:CDS 35.0%
TCATCTAACCTTCTCACTAA+TGG - chr4_4:57125008-57125027 None:intergenic 35.0%
! TTGTGACAGTGTCATTAGAT+TGG + chr4_4:57125064-57125083 Msa0689860:intron 35.0%
! CAGTGTCATTAGATTGGAAT+TGG + chr4_4:57125070-57125089 Msa0689860:intron 35.0%
!!! TACATGGCTACTTTTGTTTC+TGG + chr4_4:57125148-57125167 Msa0689860:CDS 35.0%
TATCATAGGAACAACAGCAA+GGG - chr4_4:57125218-57125237 None:intergenic 35.0%
GTTCCTATGATAGCTGTAAT+TGG + chr4_4:57125226-57125245 Msa0689860:CDS 35.0%
CATCCGTGATGATTGTAAAA+TGG + chr4_4:57125454-57125473 Msa0689860:intron 35.0%
!! CTACAAAACTGGATTAGCAA+AGG + chr4_4:57125648-57125667 Msa0689860:CDS 35.0%
ATTTACAAAGGCTAGAGTTG+CGG + chr4_4:57125950-57125969 Msa0689860:CDS 35.0%
!! TCACTGTTTCTATCTATACC+AGG - chr4_4:57126008-57126027 None:intergenic 35.0%
TAGAAACAGTGAATCTGGAT+TGG + chr4_4:57126016-57126035 Msa0689860:CDS 35.0%
TTGGAATTAGAGACAGTTAC+TGG + chr4_4:57126035-57126054 Msa0689860:CDS 35.0%
AACTAAAGCTATGGTCTTTC+CGG - chr4_4:57126147-57126166 None:intergenic 35.0%
AGATTCTATGATCCAACTTC+AGG + chr4_4:57126211-57126230 Msa0689860:CDS 35.0%
!! CTTTGAAGCTTAAATGGTTG+AGG + chr4_4:57126372-57126391 Msa0689860:intron 35.0%
AAATGGTTGAGGCAACAAAT+AGG + chr4_4:57126383-57126402 Msa0689860:CDS 35.0%
GATCCGAGAAAATATACTCT+TGG + chr4_4:57126442-57126461 Msa0689860:CDS 35.0%
GAGAAAATATACTCTTGGGA+AGG + chr4_4:57126447-57126466 Msa0689860:CDS 35.0%
TTCATCATCAAACTTCCTGA+AGG + chr4_4:57126527-57126546 Msa0689860:CDS 35.0%
! ATATACTTCGCGGACTAAAT+TGG - chr4_4:57126735-57126754 None:intergenic 35.0%
TCCTTGACATCTTAATAGCA+AGG + chr4_4:57126835-57126854 Msa0689860:intron 35.0%
!! TCCTTGCTATTAAGATGTCA+AGG - chr4_4:57126839-57126858 None:intergenic 35.0%
TATGAAAACTGCGACATCAT+CGG - chr4_4:57126862-57126881 None:intergenic 35.0%
! CGCAGTTTTCATATACTCTT+AGG + chr4_4:57126869-57126888 Msa0689860:intron 35.0%
TTTCATATACTCTTAGGGGT+TGG + chr4_4:57126875-57126894 Msa0689860:intron 35.0%
TTCATATACTCTTAGGGGTT+GGG + chr4_4:57126876-57126895 Msa0689860:intron 35.0%
CATCTGAAAAAAGACCAAGA+GGG + chr4_4:57127145-57127164 Msa0689860:intron 35.0%
! GTTACACTTTATTTACCTCC+CGG + chr4_4:57127893-57127912 Msa0689860:intron 35.0%
!!! TTTTTTTGGTATTGACCCTC+CGG - chr4_4:57127957-57127976 None:intergenic 35.0%
AATGTCATGTATGTTCAGCT+CGG - chr4_4:57128038-57128057 None:intergenic 35.0%
!! CATTTTTACTAGTCTCCAGA+AGG - chr4_4:57128251-57128270 None:intergenic 35.0%
TATGCTTTACTTGGCTCAAT+CGG + chr4_4:57128289-57128308 Msa0689860:CDS 35.0%
! TCAATCGGTTCAATTGTTTG+TGG + chr4_4:57128304-57128323 Msa0689860:CDS 35.0%
! AAGTACTGCTACTTGTTGAT+TGG + chr4_4:57128418-57128437 Msa0689860:CDS 35.0%
!! CATTTCTTCTGGGATATTGT+CGG + chr4_4:57128478-57128497 Msa0689860:CDS 35.0%
!! ATTTCTTCTGGGATATTGTC+GGG + chr4_4:57128479-57128498 Msa0689860:CDS 35.0%
AAAATCTTACGAAACGTGTG+AGG + chr4_4:57128503-57128522 Msa0689860:CDS 35.0%
AAATCTTACGAAACGTGTGA+GGG + chr4_4:57128504-57128523 Msa0689860:CDS 35.0%
TGCTTAAGAATGAAATGGCA+TGG + chr4_4:57128545-57128564 Msa0689860:CDS 35.0%
TCTGCACAATTACCGAAATT+CGG - chr4_4:57128654-57128673 None:intergenic 35.0%
AAAACAAACCTGCAAAACAG+TGG - chr4_4:57128773-57128792 None:intergenic 35.0%
GTACAGAAAATGTTCATGAC+TGG + chr4_4:57128904-57128923 Msa0689860:intron 35.0%
CTTTATGCTTCTTATGCACT+CGG + chr4_4:57129129-57129148 Msa0689860:CDS 35.0%
! TTGATCATCTGGTTCAATCT+CGG - chr4_4:57129334-57129353 None:intergenic 35.0%
TGAAGTTGAACTTAAGCATG+TGG + chr4_4:57129386-57129405 Msa0689860:CDS 35.0%
AGATTAAGGTCACGAAAAAC+CGG - chr4_4:57129441-57129460 None:intergenic 35.0%
CAAGTTCATATCATCTCTAC+CGG + chr4_4:57129746-57129765 Msa0689860:CDS 35.0%
! ACAAATGTTTTGTATCCGTC+CGG - chr4_4:57129768-57129787 None:intergenic 35.0%
GACGGATACAAAACATTTGT+AGG + chr4_4:57129768-57129787 Msa0689860:CDS 35.0%
CGGATACAAAACATTTGTAG+GGG + chr4_4:57129770-57129789 Msa0689860:CDS 35.0%
CAACCATAATTGTTGCACAT+AGG + chr4_4:57129958-57129977 Msa0689860:CDS 35.0%
TAGCCTATGTGCAACAATTA+TGG - chr4_4:57129964-57129983 None:intergenic 35.0%
ATCAATCACAGCAATCACAT+TGG - chr4_4:57130003-57130022 None:intergenic 35.0%
TTTACACACAACGAGGTAAT+TGG + chr4_4:57130113-57130132 Msa0689860:CDS 35.0%
CTAATGAAAATACCAGCTAC+AGG + chr4_4:57130186-57130205 Msa0689860:three_prime_UTR 35.0%
AGGACATGAAAAGAAAGAGT+AGG - chr4_4:57130290-57130309 None:intergenic 35.0%
!!! TTGTTTTGTGTGATGGTGGT+GGG - chr4_4:57123867-57123886 None:intergenic 40.0%
!!! TTTGTTTTGTGTGATGGTGG+TGG - chr4_4:57123868-57123887 None:intergenic 40.0%
!! GTGTGAAGAGGTTGTTTTGT+TGG + chr4_4:57124016-57124035 Msa0689860:five_prime_UTR 40.0%
! TGGAAATGGTCTGAAATGCA+AGG + chr4_4:57124131-57124150 Msa0689860:CDS 40.0%
GTTGGCAAGTTCCCTTTAAA+AGG - chr4_4:57124200-57124219 None:intergenic 40.0%
TTGCCAACAGTAACAGAAGA+AGG + chr4_4:57124212-57124231 Msa0689860:CDS 40.0%
ACACCTTCTTCTGTTACTGT+TGG - chr4_4:57124218-57124237 None:intergenic 40.0%
GAAGAACATAAGGAAGATGG+TGG + chr4_4:57124290-57124309 Msa0689860:CDS 40.0%
!! TAAGGAAGATGGTGGAAGTA+AGG + chr4_4:57124298-57124317 Msa0689860:CDS 40.0%
!! ATTCAGATTTGCTGATGGGT+TGG + chr4_4:57124361-57124380 Msa0689860:CDS 40.0%
ACTGTTGGAGCAATTGTTCA+TGG + chr4_4:57124407-57124426 Msa0689860:CDS 40.0%
! TGCATTTTACTTCCTTGTGG+TGG + chr4_4:57124651-57124670 Msa0689860:CDS 40.0%
! GCATTTTACTTCCTTGTGGT+GGG + chr4_4:57124652-57124671 Msa0689860:CDS 40.0%
! TGCTATTTGGGCTTCTTCTT+GGG + chr4_4:57124678-57124697 Msa0689860:CDS 40.0%
CAGATACTTGATCCTCATCT+TGG - chr4_4:57124885-57124904 None:intergenic 40.0%
CAAGATGAGGATCAAGTATC+TGG + chr4_4:57124883-57124902 Msa0689860:CDS 40.0%
GAATGAAATTTCCAAGCTGC+AGG - chr4_4:57125126-57125145 None:intergenic 40.0%
TTGTTGGATTCACTGCTGTT+TGG + chr4_4:57125176-57125195 Msa0689860:CDS 40.0%
! ATTCACTGCTGTTTGGCAAT+TGG + chr4_4:57125183-57125202 Msa0689860:CDS 40.0%
CTATCATAGGAACAACAGCA+AGG - chr4_4:57125219-57125238 None:intergenic 40.0%
CCTCCAATTACAGCTATCAT+AGG - chr4_4:57125232-57125251 None:intergenic 40.0%
CCTATGATAGCTGTAATTGG+AGG + chr4_4:57125229-57125248 Msa0689860:CDS 40.0%
AGGCATTCACACAACTACTT+TGG + chr4_4:57125249-57125268 Msa0689860:CDS 40.0%
!! GTATGTTTTTGTCCATGAGG+TGG + chr4_4:57125388-57125407 Msa0689860:intron 40.0%
AGTTTGACCTTGTAACCTCA+AGG + chr4_4:57125415-57125434 Msa0689860:intron 40.0%
GTTTGACCTTGTAACCTCAA+GGG + chr4_4:57125416-57125435 Msa0689860:intron 40.0%
! TCTCAGTTTTTCTGCATCTG+AGG + chr4_4:57125507-57125526 Msa0689860:intron 40.0%
AAGTTTCTGAGCAACCTTCA+AGG - chr4_4:57125626-57125645 None:intergenic 40.0%
TTGAAGGTTGCTCAGAAACT+TGG + chr4_4:57125625-57125644 Msa0689860:CDS 40.0%
CAGAAACTTGGCTACAAAAC+TGG + chr4_4:57125637-57125656 Msa0689860:CDS 40.0%
!! AACTGGATTAGCAAAGGGAA+TGG + chr4_4:57125654-57125673 Msa0689860:CDS 40.0%
!! ACTGGATTAGCAAAGGGAAT+GGG + chr4_4:57125655-57125674 Msa0689860:CDS 40.0%
TTAGCAAAGGGAATGGGATT+AGG + chr4_4:57125661-57125680 Msa0689860:CDS 40.0%
TCACATTCCACCAATCATGA+CGG - chr4_4:57125797-57125816 None:intergenic 40.0%
ATTGGTGGAATGTGAGTACT+AGG + chr4_4:57125802-57125821 Msa0689860:intron 40.0%
TTGGTGGAATGTGAGTACTA+GGG + chr4_4:57125803-57125822 Msa0689860:intron 40.0%
TTTGTAAATGCAGCCATGCT+CGG - chr4_4:57125939-57125958 None:intergenic 40.0%
! TGTTTCTATCTATACCAGGC+TGG - chr4_4:57126004-57126023 None:intergenic 40.0%
ATCAGAACTTCAGGTCTTGA+TGG - chr4_4:57126095-57126114 None:intergenic 40.0%
TCATTGAGGATCAGAACTTC+AGG - chr4_4:57126104-57126123 None:intergenic 40.0%
CACTCAAGGAGAAATCATTG+AGG - chr4_4:57126118-57126137 None:intergenic 40.0%
!! GGAAAGACCATAGCTTTAGT+TGG + chr4_4:57126146-57126165 Msa0689860:CDS 40.0%
!! ATAGCTTTAGTTGGTAGCAG+CGG + chr4_4:57126155-57126174 Msa0689860:CDS 40.0%
!! TTGTTCCGAAAATTTGGTGC+AGG + chr4_4:57126317-57126336 Msa0689860:intron 40.0%
! CTTGTCCTGCACCAAATTTT+CGG - chr4_4:57126325-57126344 None:intergenic 40.0%
CAGGACAAGTAATGTTGGAT+GGG + chr4_4:57126336-57126355 Msa0689860:intron 40.0%
! TATATTTTCTCGGATCGTGG+TGG - chr4_4:57126438-57126457 None:intergenic 40.0%
! GAGTATATTTTCTCGGATCG+TGG - chr4_4:57126441-57126460 None:intergenic 40.0%
TTGAGATTGAAGAAGCTGCT+AGG + chr4_4:57126486-57126505 Msa0689860:CDS 40.0%
TGAGATTGAAGAAGCTGCTA+GGG + chr4_4:57126487-57126506 Msa0689860:CDS 40.0%
!! GCTTTGAAACTCAGGTTAGT+CGG + chr4_4:57126549-57126568 Msa0689860:intron 40.0%
AATTTGGTCAAACCTGAAGC+AGG + chr4_4:57127103-57127122 Msa0689860:intron 40.0%
GCATCTGAAAAAAGACCAAG+AGG + chr4_4:57127144-57127163 Msa0689860:intron 40.0%
GAAAGAGGACTACAACTTTC+TGG + chr4_4:57127393-57127412 Msa0689860:CDS 40.0%
TCATCTAGGAGAAGAATTGC+TGG - chr4_4:57127465-57127484 None:intergenic 40.0%
AGCAATTCTTCTCCTAGATG+AGG + chr4_4:57127464-57127483 Msa0689860:CDS 40.0%
AACACTTCCTTGCTGAATCA+CGG - chr4_4:57127616-57127635 None:intergenic 40.0%
CTCTTCTCCAAAGGTGAAAA+TGG + chr4_4:57127660-57127679 Msa0689860:CDS 40.0%
! GTAGACTCCATTTTCACCTT+TGG - chr4_4:57127670-57127689 None:intergenic 40.0%
CTCCTGCATCTTAATAAGCT+TGG - chr4_4:57127694-57127713 None:intergenic 40.0%
CAAGCTTATTAAGATGCAGG+AGG + chr4_4:57127692-57127711 Msa0689860:CDS 40.0%
AACTTGGGTGGAATAATCCT+TGG - chr4_4:57127840-57127859 None:intergenic 40.0%
! TGAAAATTTGGAGTTCAGCC+GGG - chr4_4:57127914-57127933 None:intergenic 40.0%
! CTGAAAATTTGGAGTTCAGC+CGG - chr4_4:57127915-57127934 None:intergenic 40.0%
ACAGAGTTTCTTGCACTTGA+AGG - chr4_4:57128073-57128092 None:intergenic 40.0%
TTAGCTCCCCAATAATTGCT+AGG + chr4_4:57128092-57128111 Msa0689860:CDS 40.0%
CTAGGAATTCTTCTTATGGC+CGG + chr4_4:57128110-57128129 Msa0689860:CDS 40.0%
TCAGACAATCTACGCGAATA+CGG - chr4_4:57128139-57128158 None:intergenic 40.0%
AGTAAAGCATAGAGCCATTC+AGG - chr4_4:57128280-57128299 None:intergenic 40.0%
! GAATGGCTCTATGCTTTACT+TGG + chr4_4:57128280-57128299 Msa0689860:CDS 40.0%
TTTCTCGGATCATGTGTTTG+TGG - chr4_4:57128393-57128412 None:intergenic 40.0%
!! TTTCTTCTGGGATATTGTCG+GGG + chr4_4:57128480-57128499 Msa0689860:CDS 40.0%
GGCAGTGCTTAAGAATGAAA+TGG + chr4_4:57128540-57128559 Msa0689860:CDS 40.0%
TGAAATGGCATGGTTTGATC+AGG + chr4_4:57128555-57128574 Msa0689860:CDS 40.0%
! AGAGTGCTAGAATTTCTGCA+AGG + chr4_4:57128587-57128606 Msa0689860:CDS 40.0%
AATGGCTGATCTGACATTGT+TGG - chr4_4:57128626-57128645 None:intergenic 40.0%
AACAATGTCAGATCAGCCAT+TGG + chr4_4:57128625-57128644 Msa0689860:CDS 40.0%
CAACAGGAAATACAGCAATG+AGG - chr4_4:57128741-57128760 None:intergenic 40.0%
!! AAAGAGTGCCTGAAAGAAGA+TGG - chr4_4:57128799-57128818 None:intergenic 40.0%
!! ATGTTCATGACTGGTTTCTC+TGG + chr4_4:57128913-57128932 Msa0689860:CDS 40.0%
! TTGTAGTGGAGTTTCAAGGT+TGG - chr4_4:57129052-57129071 None:intergenic 40.0%
ACCTTGAAACTCCACTACAA+AGG + chr4_4:57129052-57129071 Msa0689860:CDS 40.0%
! ACCTTTGTAGTGGAGTTTCA+AGG - chr4_4:57129056-57129075 None:intergenic 40.0%
!! TTCCAAAAGCACCTTTGTAG+TGG - chr4_4:57129066-57129085 None:intergenic 40.0%
!!! ACTACAAAGGTGCTTTTGGA+AGG + chr4_4:57129065-57129084 Msa0689860:CDS 40.0%
!!! CTACAAAGGTGCTTTTGGAA+GGG + chr4_4:57129066-57129085 Msa0689860:CDS 40.0%
!! TTTTGGAAGGGACAGATTTC+CGG + chr4_4:57129078-57129097 Msa0689860:CDS 40.0%
AGCTATTCCATATCCACTTC+CGG - chr4_4:57129100-57129119 None:intergenic 40.0%
! ATTGGCTCCTGATTTCATCA+AGG + chr4_4:57129263-57129282 Msa0689860:CDS 40.0%
TTGGCTCCTGATTTCATCAA+GGG + chr4_4:57129264-57129283 Msa0689860:CDS 40.0%
GAGATCAAAGACTGATCTCA+TGG - chr4_4:57129298-57129317 None:intergenic 40.0%
AGATTCTATGATCCAACGTC+CGG + chr4_4:57129540-57129559 Msa0689860:CDS 40.0%
TGTGTCTTCTTAAGGACTTG+AGG - chr4_4:57129605-57129624 None:intergenic 40.0%
ATAGTAGTGGCAAATAGGCA+TGG - chr4_4:57129648-57129667 None:intergenic 40.0%
TTCATATCATCTCTACCGGA+CGG + chr4_4:57129750-57129769 Msa0689860:CDS 40.0%
AAAACATTTGTAGGGGAGAG+AGG + chr4_4:57129777-57129796 Msa0689860:CDS 40.0%
ATCAGAGAGATCAGTTCAAG+AGG + chr4_4:57129908-57129927 Msa0689860:CDS 40.0%
CACATAGGCTATCAACTATC+AGG + chr4_4:57129973-57129992 Msa0689860:CDS 40.0%
GTGATTGCTGTGATTGATGA+TGG + chr4_4:57130005-57130024 Msa0689860:CDS 40.0%
CGCGCATGATTCAATTACAA+AGG + chr4_4:57130090-57130109 Msa0689860:CDS 40.0%
ACAAAGGTTTACACACAACG+AGG + chr4_4:57130106-57130125 Msa0689860:CDS 40.0%
ACACAACGAGGTAATTGGTA+TGG + chr4_4:57130118-57130137 Msa0689860:CDS 40.0%
ATGGCATATATTCCTGTAGC+TGG - chr4_4:57130201-57130220 None:intergenic 40.0%
!!! TGTTTTGTGTGATGGTGGTG+GGG - chr4_4:57123866-57123885 None:intergenic 45.0%
AACATGAGAGCAGAAAGAGC+AGG + chr4_4:57123956-57123975 Msa0689860:five_prime_UTR 45.0%
!! AGATGGTGGAAGTAAGGAGA+AGG + chr4_4:57124304-57124323 Msa0689860:CDS 45.0%
!! TTAAGAGTGCTCCTGCTGTT+GGG + chr4_4:57124327-57124346 Msa0689860:CDS 45.0%
! CTGCTATTTGGGCTTCTTCT+TGG + chr4_4:57124677-57124696 Msa0689860:CDS 45.0%
TTCTTCTTGGGCAGGTTAGT+TGG + chr4_4:57124690-57124709 Msa0689860:intron 45.0%
TTGTTGCAGAGATTTCGTGC+TGG + chr4_4:57124834-57124853 Msa0689860:intron 45.0%
AGCGACAATCAACCAAGATG+AGG + chr4_4:57124870-57124889 Msa0689860:CDS 45.0%
AACATCCGAAGTTCGAACCT+CGG - chr4_4:57124945-57124964 None:intergenic 45.0%
CACTGATGCTGTTATGGTTC+AGG + chr4_4:57124979-57124998 Msa0689860:CDS 45.0%
TCAGGATGCCATTAGTGAGA+AGG + chr4_4:57124997-57125016 Msa0689860:CDS 45.0%
! TGCTGTTTGGCAATTGGCTT+TGG + chr4_4:57125189-57125208 Msa0689860:CDS 45.0%
CAGCTTGAGAAAGAGCTTCT+TGG - chr4_4:57125294-57125313 None:intergenic 45.0%
CAAGAAGCTCTTTCTCAAGC+TGG + chr4_4:57125292-57125311 Msa0689860:CDS 45.0%
AGCTGGCAACATTGTAGAAC+AGG + chr4_4:57125309-57125328 Msa0689860:CDS 45.0%
GTCAAACTCTTACCACCTCA+TGG - chr4_4:57125403-57125422 None:intergenic 45.0%
GATTTGAACTTCGTCCCTTG+AGG - chr4_4:57125433-57125452 None:intergenic 45.0%
TGTGCAAATCCGAGTAGTGT+TGG + chr4_4:57125558-57125577 Msa0689860:CDS 45.0%
CAACGAATGCCAACACTACT+CGG - chr4_4:57125570-57125589 None:intergenic 45.0%
!! GAGTAGTGTTGGCATTCGTT+GGG + chr4_4:57125569-57125588 Msa0689860:CDS 45.0%
!! AGTAGTGTTGGCATTCGTTG+GGG + chr4_4:57125570-57125589 Msa0689860:CDS 45.0%
GGTATGGAGGCTATCTTGTA+CGG + chr4_4:57125728-57125747 Msa0689860:CDS 45.0%
ACCATGTTTGCCGTCATGAT+TGG + chr4_4:57125784-57125803 Msa0689860:CDS 45.0%
ACCAATCATGACGGCAAACA+TGG - chr4_4:57125788-57125807 None:intergenic 45.0%
ATGTTTGCCGTCATGATTGG+TGG + chr4_4:57125787-57125806 Msa0689860:CDS 45.0%
GAGCATGGCTGCATTTACAA+AGG + chr4_4:57125938-57125957 Msa0689860:CDS 45.0%
! TTGCGGCTGCTAAGATTTTC+CGG + chr4_4:57125967-57125986 Msa0689860:CDS 45.0%
CAGGCTGGTGATCAATTATC+CGG - chr4_4:57125989-57126008 None:intergenic 45.0%
GCTGCTACCAACTAAAGCTA+TGG - chr4_4:57126156-57126175 None:intergenic 45.0%
TGGTGCAGGACAAGTAATGT+TGG + chr4_4:57126331-57126350 Msa0689860:intron 45.0%
GCAGGACAAGTAATGTTGGA+TGG + chr4_4:57126335-57126354 Msa0689860:intron 45.0%
! ATCTCAACCTGGTTTGCATC+AGG - chr4_4:57126473-57126492 None:intergenic 45.0%
CAGCTTCTTCAATCTCAACC+TGG - chr4_4:57126484-57126503 None:intergenic 45.0%
!! TCCTGAAGGCTTTGAAACTC+AGG + chr4_4:57126541-57126560 Msa0689860:CDS 45.0%
ACCTGAGTTTCAAAGCCTTC+AGG - chr4_4:57126545-57126564 None:intergenic 45.0%
GGAGAGAGGGTGATACTTTA+GGG - chr4_4:57126714-57126733 None:intergenic 45.0%
TGGAGAGAGGGTGATACTTT+AGG - chr4_4:57126715-57126734 None:intergenic 45.0%
ACTGAAGCATGTTACCCTCT+TGG - chr4_4:57127162-57127181 None:intergenic 45.0%
TAATGGCAGGTAGGAGAAAG+AGG + chr4_4:57127378-57127397 Msa0689860:intron 45.0%
AGAGGACTACAACTTTCTGG+AGG + chr4_4:57127396-57127415 Msa0689860:CDS 45.0%
GAGGACTACAACTTTCTGGA+GGG + chr4_4:57127397-57127416 Msa0689860:CDS 45.0%
! ATGCACTTGTTGCCTCATCT+AGG - chr4_4:57127479-57127498 None:intergenic 45.0%
AGATGAGGCAACAAGTGCAT+TGG + chr4_4:57127479-57127498 Msa0689860:CDS 45.0%
!! TAGTGCAAGAAGCACTTGAC+CGG + chr4_4:57127520-57127539 Msa0689860:CDS 45.0%
TTGTCCTGCCAATCATGAAC+CGG - chr4_4:57127542-57127561 None:intergenic 45.0%
AAGGTCAGCTTTGCGAATTG+TGG - chr4_4:57127589-57127608 None:intergenic 45.0%
CATGATGAGCTCTTCTCCAA+AGG + chr4_4:57127651-57127670 Msa0689860:CDS 45.0%
CGCCAAGCTTATTAAGATGC+AGG + chr4_4:57127689-57127708 Msa0689860:CDS 45.0%
ATGCTAGGAAGAGTAGTGCA+AGG + chr4_4:57127739-57127758 Msa0689860:CDS 45.0%
TTCGAATCCTAGCGCGAAAT+CGG + chr4_4:57127858-57127877 Msa0689860:intron 45.0%
ATTATTCCCGATTTCGCGCT+AGG - chr4_4:57127868-57127887 None:intergenic 45.0%
! CGGCTGAACTCCAAATTTTC+AGG + chr4_4:57127913-57127932 Msa0689860:intron 45.0%
GGAAAGCGGTCCTGAAAATT+TGG - chr4_4:57127926-57127945 None:intergenic 45.0%
CTTGCCTTCAAAGATCAAGC+CGG + chr4_4:57128223-57128242 Msa0689860:CDS 45.0%
! TACTAGTCTCCAGAAGGAAC+CGG - chr4_4:57128245-57128264 None:intergenic 45.0%
CTGGATTGTAGTAGACACTG+AGG - chr4_4:57128369-57128388 None:intergenic 45.0%
TGTGAGGGAGAAAATGCTGA+CGG + chr4_4:57128519-57128538 Msa0689860:CDS 45.0%
AATGGCATGGTTTGATCAGG+AGG + chr4_4:57128558-57128577 Msa0689860:CDS 45.0%
AGCCATTGGAGACCGAATTT+CGG + chr4_4:57128639-57128658 Msa0689860:CDS 45.0%
TACCGAAATTCGGTCTCCAA+TGG - chr4_4:57128644-57128663 None:intergenic 45.0%
! ATGCTTGTTGCTTGTACTGC+AGG + chr4_4:57128685-57128704 Msa0689860:CDS 45.0%
TGTTTCACTTAGGGCCTGTT+TGG + chr4_4:57128830-57128849 Msa0689860:intron 45.0%
GGCTGCAACAGTTCTTACAT+TGG - chr4_4:57128992-57129011 None:intergenic 45.0%
TTTCAAGGTTGGAGGCGAAA+AGG - chr4_4:57129041-57129060 None:intergenic 45.0%
TAGTGGAGTTTCAAGGTTGG+AGG - chr4_4:57129049-57129068 None:intergenic 45.0%
!!! CTCCACTACAAAGGTGCTTT+TGG + chr4_4:57129061-57129080 Msa0689860:CDS 45.0%
CAGATTTCCGGAAGTGGATA+TGG + chr4_4:57129090-57129109 Msa0689860:CDS 45.0%
CTTCTTATGCACTCGGTCTT+TGG + chr4_4:57129136-57129155 Msa0689860:CDS 45.0%
GCTTCTTGGCTAGTGAAACA+TGG + chr4_4:57129162-57129181 Msa0689860:CDS 45.0%
CCATGAGGACCATGAAAACT+CGG - chr4_4:57129212-57129231 None:intergenic 45.0%
CGCTGCTGAGACTTTAACAT+TGG + chr4_4:57129245-57129264 Msa0689860:CDS 45.0%
CTACCTCCCTTGATGAAATC+AGG - chr4_4:57129273-57129292 None:intergenic 45.0%
! CTGGTTCAATCTCGGTTTGA+CGG - chr4_4:57129326-57129345 None:intergenic 45.0%
GGAGTAGCATCTTGATCATC+TGG - chr4_4:57129345-57129364 None:intergenic 45.0%
TCACGAAAAACCGGCATATC+TGG - chr4_4:57129432-57129451 None:intergenic 45.0%
CAGCTCGGATTCGAAGATTA+AGG - chr4_4:57129455-57129474 None:intergenic 45.0%
CTTAATCTTCGAATCCGAGC+TGG + chr4_4:57129453-57129472 Msa0689860:CDS 45.0%
TCCATCAATCATTATCCGGC+CGG - chr4_4:57129562-57129581 None:intergenic 45.0%
! CTCGTCAAGAAGCATAAGCT+CGG - chr4_4:57129865-57129884 None:intergenic 45.0%
!! TTGTTTTTCCCGTTGAAGCG+CGG - chr4_4:57129941-57129960 None:intergenic 45.0%
GATGGTAAAGTAGCTGAGCA+AGG + chr4_4:57130023-57130042 Msa0689860:CDS 45.0%
GAGGTAATTGGTATGGCATC+TGG + chr4_4:57130125-57130144 Msa0689860:CDS 45.0%
TTCGTCTCTTGGTCATGTTG+AGG - chr4_4:57130159-57130178 None:intergenic 45.0%
!!! ATGATTTTTTTTTTTTTAAT+TGG + chr4_4:57124571-57124590 Msa0689860:intron 5.0%
!!! ATTATTGAATTTAAATTTTT+AGG + chr4_4:57126631-57126650 Msa0689860:intron 5.0%
!! GTTAAGAGTGCTCCTGCTGT+TGG + chr4_4:57124326-57124345 Msa0689860:CDS 50.0%
AACTCTCCAAACCCAACAGC+AGG - chr4_4:57124341-57124360 None:intergenic 50.0%
AAATAGCAGCACCCACCACA+AGG - chr4_4:57124666-57124685 None:intergenic 50.0%
!! TTGTGGTGGGTGCTGCTATT+TGG + chr4_4:57124665-57124684 Msa0689860:CDS 50.0%
!! TGTGGTGGGTGCTGCTATTT+GGG + chr4_4:57124666-57124685 Msa0689860:CDS 50.0%
ATTTGGGCTTCTTCTTGGGC+AGG + chr4_4:57124682-57124701 Msa0689860:CDS 50.0%
CAGAGATTTCGTGCTGGATG+TGG + chr4_4:57124840-57124859 Msa0689860:intron 50.0%
ATTTCGTGCTGGATGTGGAC+CGG + chr4_4:57124845-57124864 Msa0689860:CDS 50.0%
CTTGGTTGATTGTCGCTCTC+CGG - chr4_4:57124867-57124886 None:intergenic 50.0%
TGACACCGAGGTTCGAACTT+CGG + chr4_4:57124937-57124956 Msa0689860:CDS 50.0%
! GTTTTGTGTGTCCTGCAGCT+TGG + chr4_4:57125112-57125131 Msa0689860:intron 50.0%
CTTCGTCCCTTGAGGTTACA+AGG - chr4_4:57125425-57125444 None:intergenic 50.0%
!! CGAGTAGTGTTGGCATTCGT+TGG + chr4_4:57125568-57125587 Msa0689860:CDS 50.0%
AGGCTACTCATCAGCCTTGA+AGG + chr4_4:57125609-57125628 Msa0689860:CDS 50.0%
TACGCGCTTCTTCTGTGGTA+TGG + chr4_4:57125712-57125731 Msa0689860:CDS 50.0%
GTACGGCATCACGAAACCAA+TGG + chr4_4:57125745-57125764 Msa0689860:CDS 50.0%
TGCAATGGCAAGTCCTCCAT+TGG - chr4_4:57125764-57125783 None:intergenic 50.0%
GACGGCAAACATGGTTGCAA+TGG - chr4_4:57125779-57125798 None:intergenic 50.0%
CGGATAATTGATCACCAGCC+TGG + chr4_4:57125987-57126006 Msa0689860:CDS 50.0%
TTCTCCTTGAGTGTTCCTGC+CGG + chr4_4:57126125-57126144 Msa0689860:CDS 50.0%
AAAGCTATGGTCTTTCCGGC+AGG - chr4_4:57126143-57126162 None:intergenic 50.0%
TGGCAAACAAGGCAGGTTCT+TGG - chr4_4:57126418-57126437 None:intergenic 50.0%
! AAACTCAGGTTAGTCGGCTC+TGG + chr4_4:57126555-57126574 Msa0689860:intron 50.0%
! CGCGGACTAAATTGGAGAGA+GGG - chr4_4:57126727-57126746 None:intergenic 50.0%
! TCGCGGACTAAATTGGAGAG+AGG - chr4_4:57126728-57126747 None:intergenic 50.0%
! GCACTTGACCGGTTCATGAT+TGG + chr4_4:57127531-57127550 Msa0689860:CDS 50.0%
! TTGACCGGTTCATGATTGGC+AGG + chr4_4:57127535-57127554 Msa0689860:CDS 50.0%
CAGCTTTGCGAATTGTGGAC+AGG - chr4_4:57127584-57127603 None:intergenic 50.0%
CTTGCTGAATCACGGCTACA+AGG - chr4_4:57127608-57127627 None:intergenic 50.0%
CTTGTAGCCGTGATTCAGCA+AGG + chr4_4:57127606-57127625 Msa0689860:CDS 50.0%
TCGCGCTAGGATTCGAACTT+GGG - chr4_4:57127855-57127874 None:intergenic 50.0%
TTCGCGCTAGGATTCGAACT+TGG - chr4_4:57127856-57127875 None:intergenic 50.0%
TCGAATCCTAGCGCGAAATC+GGG + chr4_4:57127859-57127878 Msa0689860:intron 50.0%
! AAATTTGGAGTTCAGCCGGG+AGG - chr4_4:57127911-57127930 None:intergenic 50.0%
TTTCAGGACCGCTTTCCCTT+AGG + chr4_4:57127929-57127948 Msa0689860:intron 50.0%
ATTGACCCTCCGGTTCCTAA+GGG - chr4_4:57127947-57127966 None:intergenic 50.0%
TATTGACCCTCCGGTTCCTA+AGG - chr4_4:57127948-57127967 None:intergenic 50.0%
ATCTACGCGAATACGGTGAC+CGG - chr4_4:57128132-57128151 None:intergenic 50.0%
!! GGAACCGGCTTGATCTTTGA+AGG - chr4_4:57128230-57128249 None:intergenic 50.0%
! AAGATCAAGCCGGTTCCTTC+TGG + chr4_4:57128233-57128252 Msa0689860:CDS 50.0%
CGGATCATGTGTTTGTGGTC+TGG - chr4_4:57128388-57128407 None:intergenic 50.0%
ACAGTGGCTGCAACAACAAC+AGG - chr4_4:57128757-57128776 None:intergenic 50.0%
! TGTTGCAGCCACTGTTTTGC+AGG + chr4_4:57128762-57128781 Msa0689860:CDS 50.0%
CACTTAGGGCCTGTTTGGAT+TGG + chr4_4:57128835-57128854 Msa0689860:intron 50.0%
AAGGGACAGATTTCCGGAAG+TGG + chr4_4:57129084-57129103 Msa0689860:CDS 50.0%
TCGGTCTTTGGTACGCTTCT+TGG + chr4_4:57129148-57129167 Msa0689860:CDS 50.0%
! CCGAGTTTTCATGGTCCTCA+TGG + chr4_4:57129209-57129228 Msa0689860:CDS 50.0%
TAAAGTCTCAGCAGCGCCAT+TGG - chr4_4:57129241-57129260 None:intergenic 50.0%
GCTCCTGATTTCATCAAGGG+AGG + chr4_4:57129267-57129286 Msa0689860:CDS 50.0%
GTTCAACTTCACCGCGAAGA+CGG - chr4_4:57129377-57129396 None:intergenic 50.0%
TCCCACTAGACCAGATATGC+CGG + chr4_4:57129419-57129438 Msa0689860:CDS 50.0%
ACCGGCATATCTGGTCTAGT+GGG - chr4_4:57129423-57129442 None:intergenic 50.0%
AACCGGCATATCTGGTCTAG+TGG - chr4_4:57129424-57129443 None:intergenic 50.0%
GGCAAAACTCTTGCCCTTGT+TGG + chr4_4:57129474-57129493 Msa0689860:CDS 50.0%
ACAGCCACTAGGTCCAACAA+GGG - chr4_4:57129490-57129509 None:intergenic 50.0%
TAGTGGCTGTGGTAAGAGCT+CGG + chr4_4:57129500-57129519 Msa0689860:CDS 50.0%
TCCGGCCGGATAATGATTGA+TGG + chr4_4:57129558-57129577 Msa0689860:CDS 50.0%
GCAAATAGGCATGGCTCTTG+AGG - chr4_4:57129639-57129658 None:intergenic 50.0%
!! AGAGAGGCGTTCAACTCTCT+GGG + chr4_4:57129793-57129812 Msa0689860:CDS 50.0%
!!! CAGTTGCTCGCGCTTTTTTG+AGG + chr4_4:57129835-57129854 Msa0689860:CDS 50.0%
CGAGCTTATGCTTCTTGACG+AGG + chr4_4:57129863-57129882 Msa0689860:CDS 50.0%
AGTGCTCCTGCTGTTGGGTT+TGG + chr4_4:57124332-57124351 Msa0689860:CDS 55.0%
GCTGTTACGCGCTTCTTCTG+TGG + chr4_4:57125707-57125726 Msa0689860:CDS 55.0%
GCGCTTCTTCTGTGGTATGG+AGG + chr4_4:57125715-57125734 Msa0689860:CDS 55.0%
CGGCATCACGAAACCAATGG+AGG + chr4_4:57125748-57125767 Msa0689860:CDS 55.0%
CTTTCCGGCAGGAACACTCA+AGG - chr4_4:57126132-57126151 None:intergenic 55.0%
!! TTAGTTGGTAGCAGCGGCTC+TGG + chr4_4:57126161-57126180 Msa0689860:CDS 55.0%
ATCGTGGTGGCAAACAAGGC+AGG - chr4_4:57126425-57126444 None:intergenic 55.0%
TCGGATCGTGGTGGCAAACA+AGG - chr4_4:57126429-57126448 None:intergenic 55.0%
CGCTAGGATTCGAACTTGGG+TGG - chr4_4:57127852-57127871 None:intergenic 55.0%
GACCGCTTTCCCTTAGGAAC+CGG + chr4_4:57127935-57127954 Msa0689860:intron 55.0%
CTCCGGTTCCTAAGGGAAAG+CGG - chr4_4:57127940-57127959 None:intergenic 55.0%
GCTTTCCCTTAGGAACCGGA+GGG + chr4_4:57127939-57127958 Msa0689860:intron 55.0%
! CTGCAGGCTTTGTGTTGCAG+TGG + chr4_4:57128701-57128720 Msa0689860:CDS 55.0%
CCTTGGCATGAGCAGCTTCT+AGG - chr4_4:57128942-57128961 None:intergenic 55.0%
CCTAGAAGCTGCTCATGCCA+AGG + chr4_4:57128939-57128958 Msa0689860:CDS 55.0%
CCAAGGCCACACAACTAGCT+GGG + chr4_4:57128956-57128975 Msa0689860:CDS 55.0%
CAAGGCCACACAACTAGCTG+GGG + chr4_4:57128957-57128976 Msa0689860:CDS 55.0%
GTCCTCATGGTCTCTGCCAA+TGG + chr4_4:57129222-57129241 Msa0689860:CDS 55.0%
! CAATCTCGGTTTGACGGTCG+AGG - chr4_4:57129320-57129339 None:intergenic 55.0%
! GGGCAAGAGTTTTGCCAGCT+CGG - chr4_4:57129470-57129489 None:intergenic 55.0%
CTTGCCCTTGTTGGACCTAG+TGG + chr4_4:57129483-57129502 Msa0689860:CDS 55.0%
CACAGCCACTAGGTCCAACA+AGG - chr4_4:57129491-57129510 None:intergenic 55.0%
CTTGTTGGACCTAGTGGCTG+TGG + chr4_4:57129489-57129508 Msa0689860:CDS 55.0%
GAGCTCTTACCACAGCCACT+AGG - chr4_4:57129501-57129520 None:intergenic 55.0%
TCTATGATCCAACGTCCGGC+CGG + chr4_4:57129544-57129563 Msa0689860:CDS 55.0%
ATCATTATCCGGCCGGACGT+TGG - chr4_4:57129555-57129574 None:intergenic 55.0%
!! GAGAGAGGCGTTCAACTCTC+TGG + chr4_4:57129792-57129811 Msa0689860:CDS 55.0%
!! GAGAGGCGTTCAACTCTCTG+GGG + chr4_4:57129794-57129813 Msa0689860:CDS 55.0%
!! AGAGGCGTTCAACTCTCTGG+GGG + chr4_4:57129795-57129814 Msa0689860:CDS 55.0%
!! GGTGGTGGGGTGTGTGTTGT+TGG - chr4_4:57123853-57123872 None:intergenic 60.0%
GGGAAGGCCTGATGCAAACC+AGG + chr4_4:57126463-57126482 Msa0689860:CDS 60.0%
CGCTTTCCCTTAGGAACCGG+AGG + chr4_4:57127938-57127957 Msa0689860:intron 60.0%
GCCAAGGCCACACAACTAGC+TGG + chr4_4:57128955-57128974 Msa0689860:CDS 60.0%
CCCAGCTAGTTGTGTGGCCT+TGG - chr4_4:57128959-57128978 None:intergenic 60.0%
AGCCTCCCCAGCTAGTTGTG+TGG - chr4_4:57128965-57128984 None:intergenic 60.0%
CGCCATTGGCAGAGACCATG+AGG - chr4_4:57129227-57129246 None:intergenic 60.0%
CCTGTTCCTGACCGTCTTCG+CGG + chr4_4:57129363-57129382 Msa0689860:CDS 60.0%
ACTTCACCGCGAAGACGGTC+AGG - chr4_4:57129372-57129391 None:intergenic 60.0%
GGCACTAGACCGCGCTTCAA+CGG + chr4_4:57129929-57129948 Msa0689860:CDS 60.0%
GCACTAGACCGCGCTTCAAC+GGG + chr4_4:57129930-57129949 Msa0689860:CDS 60.0%
GGGGAGTCGCGAGCACTTCA+AGG + chr4_4:57125589-57125608 Msa0689860:CDS 65.0%
GGGGCAATCTGCACCGAGCA+TGG + chr4_4:57125923-57125942 Msa0689860:CDS 65.0%
GGCCACACAACTAGCTGGGG+AGG + chr4_4:57128960-57128979 Msa0689860:CDS 65.0%
CCGCGAAGACGGTCAGGAAC+AGG - chr4_4:57129366-57129385 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 57123821 57130470 57123821 ID=Msa0689860;Name=Msa0689860
chr4_4 mRNA 57123821 57130470 57123821 ID=Msa0689860-mRNA-1;Parent=Msa0689860;Name=Msa0689860-mRNA-1;_AED=0.04;_eAED=0.04;_QI=271|0.88|0.9|1|1|1|10|304|1324
chr4_4 exon 57123821 57124529 57123821 ID=Msa0689860-mRNA-1:exon:15210;Parent=Msa0689860-mRNA-1
chr4_4 exon 57124649 57124703 57124649 ID=Msa0689860-mRNA-1:exon:15211;Parent=Msa0689860-mRNA-1
chr4_4 exon 57124843 57125018 57124843 ID=Msa0689860-mRNA-1:exon:15212;Parent=Msa0689860-mRNA-1
chr4_4 exon 57125130 57125330 57125130 ID=Msa0689860-mRNA-1:exon:15213;Parent=Msa0689860-mRNA-1
chr4_4 exon 57125553 57125812 57125553 ID=Msa0689860-mRNA-1:exon:15214;Parent=Msa0689860-mRNA-1
chr4_4 exon 57125917 57126232 57125917 ID=Msa0689860-mRNA-1:exon:15215;Parent=Msa0689860-mRNA-1
chr4_4 exon 57126380 57126562 57126380 ID=Msa0689860-mRNA-1:exon:15216;Parent=Msa0689860-mRNA-1
chr4_4 exon 57127387 57127760 57127387 ID=Msa0689860-mRNA-1:exon:15217;Parent=Msa0689860-mRNA-1
chr4_4 exon 57128069 57128783 57128069 ID=Msa0689860-mRNA-1:exon:15218;Parent=Msa0689860-mRNA-1
chr4_4 exon 57128910 57130470 57128910 ID=Msa0689860-mRNA-1:exon:15219;Parent=Msa0689860-mRNA-1
chr4_4 five_prime_UTR 57123821 57124091 57123821 ID=Msa0689860-mRNA-1:five_prime_utr;Parent=Msa0689860-mRNA-1
chr4_4 CDS 57124092 57124529 57124092 ID=Msa0689860-mRNA-1:cds;Parent=Msa0689860-mRNA-1
chr4_4 CDS 57124649 57124703 57124649 ID=Msa0689860-mRNA-1:cds;Parent=Msa0689860-mRNA-1
chr4_4 CDS 57124843 57125018 57124843 ID=Msa0689860-mRNA-1:cds;Parent=Msa0689860-mRNA-1
chr4_4 CDS 57125130 57125330 57125130 ID=Msa0689860-mRNA-1:cds;Parent=Msa0689860-mRNA-1
chr4_4 CDS 57125553 57125812 57125553 ID=Msa0689860-mRNA-1:cds;Parent=Msa0689860-mRNA-1
chr4_4 CDS 57125917 57126232 57125917 ID=Msa0689860-mRNA-1:cds;Parent=Msa0689860-mRNA-1
chr4_4 CDS 57126380 57126562 57126380 ID=Msa0689860-mRNA-1:cds;Parent=Msa0689860-mRNA-1
chr4_4 CDS 57127387 57127760 57127387 ID=Msa0689860-mRNA-1:cds;Parent=Msa0689860-mRNA-1
chr4_4 CDS 57128069 57128783 57128069 ID=Msa0689860-mRNA-1:cds;Parent=Msa0689860-mRNA-1
chr4_4 CDS 57128910 57130166 57128910 ID=Msa0689860-mRNA-1:cds;Parent=Msa0689860-mRNA-1
chr4_4 three_prime_UTR 57130167 57130470 57130167 ID=Msa0689860-mRNA-1:three_prime_utr;Parent=Msa0689860-mRNA-1
Gene Sequence

>Msa0689860

ATGTCAAAAGAGTCTGAAGAAATAAAAACTACTGAGCAATGGAAATGGTCTGAAATGCAAGGACTTGAGCTTGTGAGTGATGATATCAATTCTTCTTCTTCTGACCCTTTTAAAGGGAACTTGCCAACAGTAACAGAAGAAGGTGTTACTGCTACTGTTTCTGATTCTCAGAATCAAGTTCAAGTTTCAAAGGAAATGGAAGAACATAAGGAAGATGGTGGAAGTAAGGAGAAGGTTAAGAGTGCTCCTGCTGTTGGGTTTGGAGAGTTATTCAGATTTGCTGATGGGTTGGATTATATTCTAATGACAATTGGAACTGTTGGAGCAATTGTTCATGGTTGTTCTTTGCCTCTTTTTCTTAGATTCTTTGCTGATCTTGTTAACTCTTTTGGTTCCAATGCTAATAATTTGGATAAGATGACACAAGAAGTTGTTAAGTATGCATTTTACTTCCTTGTGGTGGGTGCTGCTATTTGGGCTTCTTCTTGGGCAGAGATTTCGTGCTGGATGTGGACCGGAGAGCGACAATCAACCAAGATGAGGATCAAGTATCTGGAAGCTGCATTGAAACAAGATATTGAATTCTTTGACACCGAGGTTCGAACTTCGGATGTTGTTTTTGCAATCAACACTGATGCTGTTATGGTTCAGGATGCCATTAGTGAGAAGCTTGGAAATTTCATTCACTACATGGCTACTTTTGTTTCTGGTTTTGTTGTTGGATTCACTGCTGTTTGGCAATTGGCTTTGGTTACCCTTGCTGTTGTTCCTATGATAGCTGTAATTGGAGGCATTCACACAACTACTTTGGCTAAACTCTCTAGTAAGAGCCAAGAAGCTCTTTCTCAAGCTGGCAACATTGTAGAACAGACGGTTGTGCAAATCCGAGTAGTGTTGGCATTCGTTGGGGAGTCGCGAGCACTTCAAGGCTACTCATCAGCCTTGAAGGTTGCTCAGAAACTTGGCTACAAAACTGGATTAGCAAAGGGAATGGGATTAGGTGCGACTTACTTTGTCGTTTTCTGCTGTTACGCGCTTCTTCTGTGGTATGGAGGCTATCTTGTACGGCATCACGAAACCAATGGAGGACTTGCCATTGCAACCATGTTTGCCGTCATGATTGGTGGAATAGGTTTGGGGCAATCTGCACCGAGCATGGCTGCATTTACAAAGGCTAGAGTTGCGGCTGCTAAGATTTTCCGGATAATTGATCACCAGCCTGGTATAGATAGAAACAGTGAATCTGGATTGGAATTAGAGACAGTTACTGGACTTGTTGAACTGAAAAATGTGGACTTCTCTTATCCATCAAGACCTGAAGTTCTGATCCTCAATGATTTCTCCTTGAGTGTTCCTGCCGGAAAGACCATAGCTTTAGTTGGTAGCAGCGGCTCTGGCAAGAGCACTGTTGTTTCTCTATTGAGAGATTCTATGATCCAACTTCAGCTTAAATGGTTGAGGCAACAAATAGGACTAGTGAGCCAAGAACCTGCCTTGTTTGCCACCACGATCCGAGAAAATATACTCTTGGGAAGGCCTGATGCAAACCAGGTTGAGATTGAAGAAGCTGCTAGGGTTGCTAATGCTCATTCATTCATCATCAAACTTCCTGAAGGCTTTGAAACTCAGGTAGGAGAAAGAGGACTACAACTTTCTGGAGGGCAAAAACAAAGAATAGCAATAGCAAGGGCAATGCTAAAAAATCCAGCAATTCTTCTCCTAGATGAGGCAACAAGTGCATTGGACTCTGAATCAGAAAAGCTAGTGCAAGAAGCACTTGACCGGTTCATGATTGGCAGGACAACTCTTGTAATTGCTCATCGCCTGTCCACAATTCGCAAAGCTGACCTTGTAGCCGTGATTCAGCAAGGAAGTGTTTTTGAAATTGGAACTCATGATGAGCTCTTCTCCAAAGGTGAAAATGGAGTCTACGCCAAGCTTATTAAGATGCAGGAGGTTGCCCATGAAAATGCTATGAATAATGCTAGGAAGAGTAGTGCAAGGCCTTCAAGTGCAAGAAACTCTGTTAGCTCCCCAATAATTGCTAGGAATTCTTCTTATGGCCGGTCACCGTATTCGCGTAGATTGTCTGATTTCTCTACATCAGATTTTAGTTTGTCACTTGATGCATCTCATCCAAATTACAAGCATGAAAAGCTTGCCTTCAAAGATCAAGCCGGTTCCTTCTGGAGACTAGTAAAAATGAACTCTCCTGAATGGCTCTATGCTTTACTTGGCTCAATCGGTTCAATTGTTTGTGGATCGCTTAGTGCTTTCTTTGCTTATGTTCTTAGTGCTGTCCTCAGTGTCTACTACAATCCAGACCACAAACACATGATCCGAGAAATAGATAAGTACTGCTACTTGTTGATTGGTCTTTCATCAACTGCACTTATCTTTAATACATTGCAACATTTCTTCTGGGATATTGTCGGGGAAAATCTTACGAAACGTGTGAGGGAGAAAATGCTGACGGCAGTGCTTAAGAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCTAGAATTTCTGCAAGGCTTGCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGACCGAATTTCGGTAATTGTGCAGAATACTGCACTTATGCTTGTTGCTTGTACTGCAGGCTTTGTGTTGCAGTGGCGTCTTGCACTTGTCCTCATTGCTGTATTTCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACCTAGAAGCTGCTCATGCCAAGGCCACACAACTAGCTGGGGAGGCTATAGCCAATGTAAGAACTGTTGCAGCCTTCAATTCAGAATCGAAAATTGTTCGCCTTTTCGCCTCCAACCTTGAAACTCCACTACAAAGGTGCTTTTGGAAGGGACAGATTTCCGGAAGTGGATATGGAATAGCTCAGTTTGCACTTTATGCTTCTTATGCACTCGGTCTTTGGTACGCTTCTTGGCTAGTGAAACATGGAATATCTGACTTCTCTAAAACAATCCGAGTTTTCATGGTCCTCATGGTCTCTGCCAATGGCGCTGCTGAGACTTTAACATTGGCTCCTGATTTCATCAAGGGAGGTAGAGCCATGAGATCAGTCTTTGATCTCCTCGACCGTCAAACCGAGATTGAACCAGATGATCAAGATGCTACTCCTGTTCCTGACCGTCTTCGCGGTGAAGTTGAACTTAAGCATGTGGATTTCTCGTATCCCACTAGACCAGATATGCCGGTTTTTCGTGACCTTAATCTTCGAATCCGAGCTGGCAAAACTCTTGCCCTTGTTGGACCTAGTGGCTGTGGTAAGAGCTCGGTGATTGCACTTATACAGAGATTCTATGATCCAACGTCCGGCCGGATAATGATTGATGGAAAAGACATCAGAAAATATAACCTCAAGTCCTTAAGAAGACACATTTCTGTAGTACCTCAAGAGCCATGCCTATTTGCCACTACTATTTATGAAAACATTGCATATGGTCATGACTCAGCAACAGAAGCCGAAATAATTGAAGCAGCAACACTTGCTAATGCTCACAAGTTCATATCATCTCTACCGGACGGATACAAAACATTTGTAGGGGAGAGAGGCGTTCAACTCTCTGGGGGACAAAAACAAAGAATAGCAGTTGCTCGCGCTTTTTTGAGGAAAGCCGAGCTTATGCTTCTTGACGAGGCAACAAGTGCACTTGATGCTGAATCAGAGAGATCAGTTCAAGAGGCACTAGACCGCGCTTCAACGGGAAAAACAACCATAATTGTTGCACATAGGCTATCAACTATCAGGAATGCCAATGTGATTGCTGTGATTGATGATGGTAAAGTAGCTGAGCAAGGTTCACATTCACAGTTGATGAAAAATCATCAGGATGGGATATATGCGCGCATGATTCAATTACAAAGGTTTACACACAACGAGGTAATTGGTATGGCATCTGGTTCAAGTTCCTCAACATGA
Protein sequence

>Msa0689860

MSKESEEIKTTEQWKWSEMQGLELVSDDINSSSSDPFKGNLPTVTEEGVTATVSDSQNQVQVSKEMEEHKEDGGSKEKVKSAPAVGFGELFRFADGLDYILMTIGTVGAIVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALKQDIEFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTTTLAKLSSKSQEALSQAGNIVEQTVVQIRVVLAFVGESRALQGYSSALKVAQKLGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHHETNGGLAIATMFAVMIGGIGLGQSAPSMAAFTKARVAAAKIFRIIDHQPGIDRNSESGLELETVTGLVELKNVDFSYPSRPEVLILNDFSLSVPAGKTIALVGSSGSGKSTVVSLLRDSMIQLQLKWLRQQIGLVSQEPALFATTIRENILLGRPDANQVEIEEAARVANAHSFIIKLPEGFETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVIQQGSVFEIGTHDELFSKGENGVYAKLIKMQEVAHENAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYKHEKLAFKDQAGSFWRLVKMNSPEWLYALLGSIGSIVCGSLSAFFAYVLSAVLSVYYNPDHKHMIREIDKYCYLLIGLSSTALIFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARISARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSESKIVRLFASNLETPLQRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRQTEIEPDDQDATPVPDRLRGEVELKHVDFSYPTRPDMPVFRDLNLRIRAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRIMIDGKDIRKYNLKSLRRHISVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAVARAFLRKAELMLLDEATSALDAESERSVQEALDRASTGKTTIIVAHRLSTIRNANVIAVIDDGKVAEQGSHSQLMKNHQDGIYARMIQLQRFTHNEVIGMASGSSSST*