AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1205790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205790 MtrunA17_Chr4g0055031 98.695 613 8 0 1 613 1 613 0.0 1266
Msa1205790 MtrunA17_Chr8g0361791 68.233 617 181 6 3 613 2 609 0.0 911
Msa1205790 MtrunA17_Chr5g0416991 66.451 617 191 6 3 613 2 608 0.0 884
Msa1205790 MtrunA17_Chr3g0092501 63.754 618 207 7 1 613 1 606 0.0 836
Msa1205790 MtrunA17_Chr8g0388881 56.260 615 239 7 18 612 25 629 0.0 739
Msa1205790 MtrunA17_Chr7g0246701 56.844 621 245 7 5 605 10 627 0.0 735
Msa1205790 MtrunA17_Chr6g0472571 56.209 612 249 6 17 612 27 635 0.0 733
Msa1205790 MtrunA17_Chr1g0203741 57.167 600 249 4 13 604 19 618 0.0 729
Msa1205790 MtrunA17_Chr8g0350391 54.337 611 251 6 18 605 27 632 0.0 697
Msa1205790 MtrunA17_Chr7g0214551 52.841 528 238 4 82 598 39 566 0.0 595
Msa1205790 MtrunA17_Chr8g0369481 47.932 532 264 6 86 610 70 595 1.23e-178 519
Msa1205790 MtrunA17_Chr5g0409411 44.243 608 309 11 10 610 13 597 2.13e-173 505
Msa1205790 MtrunA17_Chr7g0246681 45.936 566 259 13 60 603 47 587 6.18e-167 488
Msa1205790 MtrunA17_Chr8g0350351 44.102 551 276 9 67 604 70 601 8.82e-167 489
Msa1205790 MtrunA17_Chr1g0167381 42.357 543 279 11 84 606 90 618 4.44e-150 447
Msa1205790 MtrunA17_Chr1g0187601 41.261 555 292 11 72 606 77 617 2.86e-146 437
Msa1205790 MtrunA17_Chr3g0112341 43.126 531 274 12 84 601 151 666 9.50e-145 434
Msa1205790 MtrunA17_Chr1g0183721 40.255 549 294 11 84 612 60 594 3.76e-144 431
Msa1205790 MtrunA17_Chr1g0159741 44.030 536 263 14 86 602 141 658 2.98e-143 430
Msa1205790 MtrunA17_Chr3g0130381 44.343 548 266 16 76 603 248 776 1.08e-141 431
Msa1205790 MtrunA17_Chr5g0435751 41.276 533 263 11 82 600 121 617 3.79e-141 424
Msa1205790 MtrunA17_Chr8g0384431 43.411 516 255 14 86 580 288 787 5.16e-134 411
Msa1205790 MtrunA17_Chr8g0372471 43.870 522 263 14 89 594 380 887 3.62e-133 411
Msa1205790 MtrunA17_Chr1g0171781 41.078 538 271 12 89 603 89 603 6.36e-133 402
Msa1205790 MtrunA17_Chr5g0437501 39.292 537 282 15 94 610 100 612 1.40e-128 391
Msa1205790 MtrunA17_Chr3g0125511 39.405 538 288 15 86 603 223 742 2.40e-123 382
Msa1205790 MtrunA17_Chr3g0113981 39.400 500 274 12 91 579 171 652 3.14e-122 376
Msa1205790 MtrunA17_Chr1g0155141 35.581 534 295 15 86 603 199 699 6.52e-96 308
Msa1205790 MtrunA17_Chr3g0115931 32.200 559 322 17 82 603 150 688 4.41e-91 296
Msa1205790 MtrunA17_Chr5g0426281 31.794 563 321 18 76 603 136 670 1.98e-88 288
Msa1205790 MtrunA17_Chr5g0404771 51.965 229 103 5 89 312 322 548 3.87e-72 242
Msa1205790 MtrunA17_Chr5g0404761 35.401 274 158 7 335 594 1 269 3.69e-49 172
Msa1205790 MtrunA17_Chr4g0043121 28.608 388 247 8 16 389 24 395 3.14e-46 169
Msa1205790 MtrunA17_Chr4g0043131 48.276 145 70 3 461 602 40 182 7.19e-41 147
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205790 AT4G18030.1 74.794 607 149 3 1 605 1 605 0.0 971
Msa1205790 AT1G26850.2 68.882 617 183 5 1 610 1 615 0.0 914
Msa1205790 AT1G26850.1 68.882 617 183 5 1 610 1 615 0.0 914
Msa1205790 AT4G10440.1 57.143 616 239 6 11 609 15 622 0.0 754
Msa1205790 AT1G33170.1 55.031 636 252 6 3 607 6 638 0.0 730
Msa1205790 AT1G26850.3 67.921 505 153 5 1 498 1 503 0.0 726
Msa1205790 AT4G00750.1 55.025 607 261 6 18 612 25 631 0.0 716
Msa1205790 AT2G45750.1 54.248 612 263 8 18 613 19 629 0.0 691
Msa1205790 AT2G43200.2 51.731 520 240 5 86 598 91 606 0.0 563
Msa1205790 AT2G43200.1 51.731 520 240 5 86 598 91 606 0.0 563
Msa1205790 AT1G31850.1 44.928 621 309 13 2 610 4 603 0.0 538
Msa1205790 AT1G31850.2 44.928 621 309 13 2 610 4 603 0.0 538
Msa1205790 AT1G31850.4 44.928 621 309 13 2 610 4 603 0.0 538
Msa1205790 AT1G31850.3 44.928 621 309 13 2 610 4 603 0.0 538
Msa1205790 AT4G19120.1 44.545 550 290 6 73 613 57 600 4.48e-178 518
Msa1205790 AT4G19120.2 44.545 550 290 6 73 613 57 600 4.48e-178 518
Msa1205790 AT4G00740.1 44.505 546 275 9 69 603 65 593 4.77e-162 477
Msa1205790 AT4G00740.2 44.505 546 275 9 69 603 65 593 4.77e-162 477
Msa1205790 AT1G04430.1 38.622 624 342 12 9 606 8 616 2.23e-146 437
Msa1205790 AT1G04430.3 38.622 624 342 12 9 606 8 616 2.23e-146 437
Msa1205790 AT1G04430.2 38.622 624 342 12 9 606 8 616 2.23e-146 437
Msa1205790 AT4G19120.3 45.759 448 229 5 73 511 57 499 4.91e-146 432
Msa1205790 AT5G06050.1 42.752 545 262 14 82 602 145 663 5.29e-146 438
Msa1205790 AT4G14360.1 42.690 513 263 10 84 579 74 572 4.20e-144 431
Msa1205790 AT4G14360.2 42.690 513 263 10 84 579 74 572 4.20e-144 431
Msa1205790 AT2G39750.1 41.516 554 282 12 69 600 156 689 4.71e-144 434
Msa1205790 AT3G23300.2 40.433 554 297 11 72 606 65 604 1.22e-143 430
Msa1205790 AT3G23300.1 40.433 554 297 11 72 606 65 604 1.22e-143 430
Msa1205790 AT1G77260.1 43.097 536 259 15 86 600 143 653 2.11e-142 428
Msa1205790 AT1G29470.1 43.885 556 267 18 73 603 222 757 1.20e-139 425
Msa1205790 AT1G29470.2 43.885 556 267 18 73 603 222 757 1.20e-139 425
Msa1205790 AT5G14430.1 39.016 610 324 16 16 603 21 604 4.15e-136 410
Msa1205790 AT2G34300.2 42.937 538 267 15 86 603 240 757 1.30e-135 414
Msa1205790 AT2G34300.3 42.937 538 267 15 86 603 240 757 1.30e-135 414
Msa1205790 AT2G34300.1 42.937 538 267 15 86 603 240 757 1.30e-135 414
Msa1205790 AT5G04060.1 39.962 533 283 10 88 603 85 597 9.16e-135 407
Msa1205790 AT3G56080.1 42.231 502 256 12 95 582 114 595 1.73e-134 406
Msa1205790 AT5G14430.2 38.689 610 326 16 16 603 21 604 3.05e-134 406
Msa1205790 AT3G10200.1 40.706 538 287 11 81 603 68 588 3.48e-133 402
Msa1205790 AT5G64030.1 42.205 526 270 13 95 603 308 816 7.83e-133 409
Msa1205790 AT3G51070.1 42.453 530 265 14 94 603 380 889 6.43e-129 400
Msa1205790 AT2G40280.1 40.421 522 270 13 94 603 89 581 1.58e-127 388
Msa1205790 AT3G10200.2 40.234 512 273 11 81 576 68 562 2.92e-125 382
Msa1205790 AT3G56080.2 43.363 452 222 12 95 532 114 545 1.23e-119 366
Msa1205790 AT3G51070.2 43.982 457 224 12 94 532 380 822 1.08e-111 354
Msa1205790 AT1G19430.1 35.609 542 298 17 80 603 214 722 1.38e-94 306
Msa1205790 AT1G19430.3 35.609 542 298 17 80 603 214 722 1.38e-94 306
Msa1205790 AT1G13860.4 32.072 555 308 13 82 600 77 598 7.29e-90 290
Msa1205790 AT1G13860.3 32.072 555 308 13 82 600 77 598 7.29e-90 290
Msa1205790 AT1G13860.1 32.072 555 308 13 82 600 77 598 7.29e-90 290
Msa1205790 AT1G13860.5 32.072 555 308 13 82 600 77 598 7.29e-90 290
Msa1205790 AT1G78240.1 32.671 554 319 16 84 602 144 678 3.83e-89 291
Msa1205790 AT1G78240.2 32.671 554 319 16 84 602 144 678 3.83e-89 291
Msa1205790 AT2G03480.2 31.942 551 301 13 84 602 84 592 2.25e-86 281
Msa1205790 AT2G03480.1 32.545 550 310 14 84 602 84 603 9.48e-85 277
Msa1205790 AT1G13860.2 33.550 462 252 11 172 600 3 442 5.81e-80 259
Msa1205790 AT1G19430.2 31.873 411 234 15 80 473 214 595 2.05e-48 179
Msa1205790 AT2G03480.3 30.282 284 184 3 84 358 84 362 4.21e-41 155

Find 191 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATATTGGCTAAAATTATT+TGG 0.119415 8_1:-62261562 None:intergenic
ATTATCTAAATCACATAAAT+TGG 0.157551 8_1:-62259782 None:intergenic
CCTGCTATTATTGGTGTTCT+TGG 0.181876 8_1:+62259257 Msa1205790:CDS
TGCAAGGCTGTCTCCCTTTC+CGG 0.190229 8_1:-62258194 None:intergenic
TATCTGGCCCTCCAATTAAT+TGG 0.198353 8_1:+62259593 Msa1205790:CDS
TTTCCATTTCTTCTTTGCTT+TGG 0.202067 8_1:-62261354 None:intergenic
AAAGAAAACTGTGGGGTTAA+TGG 0.221625 8_1:+62258060 Msa1205790:exon
TTCCATTTCTTCTTTGCTTT+GGG 0.222497 8_1:-62261353 None:intergenic
ACAGTTCTACACTTGATTAA+AGG 0.261605 8_1:-62261460 None:intergenic
TACCAAGTTTGGTATGGTTT+TGG 0.280856 8_1:+62261685 Msa1205790:three_prime_UTR
ATCAAGAGGACAACAAATTA+TGG 0.295703 8_1:+62260134 Msa1205790:CDS
TCAACATCAACAAAATATAT+TGG 0.295744 8_1:-62261576 None:intergenic
TATATTGGCTAAAATTATTT+GGG 0.298103 8_1:-62261561 None:intergenic
ACAAGGTTCAGAAAATTGTT+AGG 0.303090 8_1:+62261150 Msa1205790:CDS
TAGAGATGGACCGCATATTA+AGG 0.304977 8_1:+62261084 Msa1205790:CDS
CTAATACCATGGGCTGAAAA+TGG 0.306663 8_1:+62259338 Msa1205790:CDS
CAGTTGGAGTGCATCATTCT+AGG 0.313029 8_1:-62256758 None:intergenic
TCTCTAAAAGGATGTCTTCT+AGG 0.313204 8_1:-62261067 None:intergenic
AGCTTTGCAAAGTTCAAGTA+TGG 0.313361 8_1:+62261765 Msa1205790:three_prime_UTR
CAAACTGAACTTGTGCTTCA+TGG 0.317331 8_1:-62259217 None:intergenic
GGCTGGTTACCTCGGGGATA+GGG 0.326072 8_1:-62260006 None:intergenic
CCTTCGTTCGCTTCCATGTT+TGG 0.326669 8_1:-62259627 None:intergenic
ATATGCGGTCCATCTCTAAA+AGG 0.333621 8_1:-62261079 None:intergenic
CTAGAGAAAACATGATCTAT+AGG 0.334371 8_1:+62258404 Msa1205790:CDS
TGGAGAAGGCTAATCAAAAC+TGG 0.334883 8_1:+62258563 Msa1205790:CDS
CGAGGGGTACCTGCTATTAT+TGG 0.338287 8_1:+62259248 Msa1205790:CDS
ATAACGTCTTTAGCTATTCT+AGG 0.339212 8_1:-62260088 None:intergenic
TACAATAACCAATATCTTCT+CGG 0.340229 8_1:-62261225 None:intergenic
GATTATGCAGGTTGCGAGTT+GGG 0.346051 8_1:+62259139 Msa1205790:intron
ACAATTGCTGAGAACACTTT+AGG 0.351727 8_1:+62260301 Msa1205790:CDS
GGTTATTGTAAAAGAGTATT+GGG 0.355588 8_1:+62261238 Msa1205790:CDS
ATTTGCACCCGAGAAGATAT+TGG 0.359714 8_1:+62261217 Msa1205790:CDS
AATGAGATGGGAATCTAAAA+TGG 0.360431 8_1:+62261175 Msa1205790:CDS
AATTTCTACATATTTGTGTT+GGG 0.361502 8_1:-62258281 None:intergenic
AAGAAAACTGTGGGGTTAAT+GGG 0.365285 8_1:+62258061 Msa1205790:exon
CGGATTATGACCGATCCTTC+TGG 0.383497 8_1:-62261107 None:intergenic
GGGAATGTGTTCAAATTTCC+AGG 0.385082 8_1:+62258598 Msa1205790:CDS
TAGAGAAAACATGATCTATA+GGG 0.387569 8_1:+62258405 Msa1205790:CDS
AATATCTTCTCGGGTGCAAA+TGG 0.387847 8_1:-62261215 None:intergenic
AACCCAAAGCAAAGAAGAAA+TGG 0.396230 8_1:+62261351 Msa1205790:three_prime_UTR
CAAGGTTCAGAAAATTGTTA+GGG 0.396641 8_1:+62261151 Msa1205790:CDS
TCCGGCAACTTCACTTTGGC+TGG 0.396919 8_1:-62260023 None:intergenic
TGGCTGGTTACCTCGGGGAT+AGG 0.400033 8_1:-62260007 None:intergenic
CTTTATAACTTATAGTTAAG+TGG 0.403079 8_1:-62256884 None:intergenic
ATAGCTAAAGACGTTATTCC+AGG 0.406709 8_1:+62260094 Msa1205790:CDS
TCACTTTGGCTGGTTACCTC+GGG 0.406855 8_1:-62260013 None:intergenic
AAAGGAGTCGTGTACCCTTC+GGG 0.407789 8_1:-62258478 None:intergenic
CTCCAAAACCATACCAAACT+TGG 0.408191 8_1:-62261687 None:intergenic
CTGACAGTACCATCTTTGAT+TGG 0.409983 8_1:-62258682 None:intergenic
AAAAGGGCGATATCGCTATC+TGG 0.411310 8_1:+62259719 Msa1205790:CDS
TAGATAATGCTGATGATGTT+TGG 0.414758 8_1:+62259797 Msa1205790:CDS
GGGAGACAGCCTTGCATTGA+AGG 0.415396 8_1:+62258201 Msa1205790:CDS
GTTCTCGTTGTCTAATACCA+TGG 0.415422 8_1:+62259327 Msa1205790:CDS
TGGGGTTCAAAATTCAAATT+CGG 0.428738 8_1:-62258262 None:intergenic
ATCTAGCCGAAAGTCTTTGC+TGG 0.428753 8_1:+62259683 Msa1205790:CDS
CTCTAGGGAATGTCATTGCT+CGG 0.429428 8_1:-62258387 None:intergenic
CAGCATTGGACACTGGTTGC+GGG 0.430729 8_1:+62258707 Msa1205790:CDS
TCCACTGTCAGATGCTTGTA+AGG 0.431312 8_1:-62258544 None:intergenic
CAAAACTGGGTGAAATTTGA+AGG 0.440422 8_1:+62258577 Msa1205790:CDS
TCATTGCTCGGTCTTGCTCT+TGG 0.442210 8_1:-62258375 None:intergenic
TGTGCTTCATGGTTATCCTT+CGG 0.442466 8_1:-62259206 None:intergenic
GTAAGGAACATTAGCATAGT+AGG 0.443219 8_1:-62258527 None:intergenic
TGAACTTTGCAAAGCTAAGT+AGG 0.444470 8_1:-62261758 None:intergenic
AAAAGGAGTCGTGTACCCTT+CGG 0.449355 8_1:-62258479 None:intergenic
TGGTTATTGTAAAAGAGTAT+TGG 0.449942 8_1:+62261237 Msa1205790:CDS
TTCACTTTGGCTGGTTACCT+CGG 0.450057 8_1:-62260014 None:intergenic
TCGTGCTCTGTTGCCCGGTA+AGG 0.451040 8_1:-62258095 None:intergenic
GATGAGATGAGATGGGAGGA+GGG 0.454674 8_1:-62256799 None:intergenic
AGATGAGATGAGATGGGAGG+AGG 0.457113 8_1:-62256800 None:intergenic
ACCGAAAGCTAAAATGTTCA+AGG 0.457641 8_1:+62258318 Msa1205790:CDS
ACAATAACCAATATCTTCTC+GGG 0.458082 8_1:-62261224 None:intergenic
CTCCTCCGGCAACTTCACTT+TGG 0.458578 8_1:-62260027 None:intergenic
CAATTTCTACATATTTGTGT+TGG 0.459965 8_1:-62258282 None:intergenic
ATCTATGAAAGAGGTCTCAT+TGG 0.460262 8_1:+62260328 Msa1205790:CDS
TGCAGAGGGCATGTATCTAA+TGG 0.460772 8_1:+62259531 Msa1205790:intron
ATGGACATGAATGCAGGCCT+TGG 0.463464 8_1:+62260223 Msa1205790:CDS
ACATGGCAAAGCAGTGGTTC+CGG 0.463502 8_1:+62258175 Msa1205790:CDS
AGTTCAAGTATGGCTCCATA+TGG 0.463641 8_1:+62261775 Msa1205790:three_prime_UTR
CATGAATAGTCATCAAAGAT+TGG 0.468530 8_1:+62261306 Msa1205790:three_prime_UTR
TTAGGTGTTATCTATGAAAG+AGG 0.473905 8_1:+62260319 Msa1205790:CDS
GGCCTTCGTGCTCTGTTGCC+CGG 0.478298 8_1:-62258100 None:intergenic
CAAAGCAGTGGTTCCGGAAA+GGG 0.478553 8_1:+62258181 Msa1205790:CDS
ACCAGCCAAAGTGAAGTTGC+CGG 0.483225 8_1:+62260022 Msa1205790:CDS
GGGACTGCAAACAGCCTAGC+AGG 0.484901 8_1:-62260064 None:intergenic
GACATGAATGCAGGCCTTGG+AGG 0.485877 8_1:+62260226 Msa1205790:CDS
TGATCGGCACCACTAGATAT+CGG 0.486791 8_1:+62260194 Msa1205790:CDS
AGCACAAGTTCAGTTTGCAT+TGG 0.488386 8_1:+62259223 Msa1205790:CDS
CTGGGAAAAGAAGTATGAAA+AGG 0.490567 8_1:+62259702 Msa1205790:CDS
TCATTGGTATTTATCATGAC+TGG 0.490759 8_1:+62260344 Msa1205790:CDS
AAACTTCTTCAATTCTCCTC+CGG 0.491193 8_1:-62260041 None:intergenic
GGGAACATGGTTCCTCCACC+TGG 0.492570 8_1:-62258616 None:intergenic
TATGATCTTATTCATGCCAA+TGG 0.492874 8_1:+62260552 Msa1205790:CDS
ATTGTAAAAGAGTATTGGGT+TGG 0.493911 8_1:+62261242 Msa1205790:CDS
TTATCTAAATCACATAAATT+GGG 0.494725 8_1:-62259781 None:intergenic
GAGAATAGAGATCCCAGGTC+TGG 0.499487 8_1:-62256968 None:intergenic
TGAATAAGATCATATGTCCT+TGG 0.500320 8_1:-62260543 None:intergenic
ACAGCATTGGACACTGGTTG+CGG 0.504094 8_1:+62258706 Msa1205790:CDS
AAAAGAATTAATAGATTGAT+CGG 0.507870 8_1:+62260178 Msa1205790:CDS
TGCCTCATTCCTGCTCCCGA+AGG 0.510952 8_1:+62258463 Msa1205790:CDS
AGGAAGAAACTTACTTGTCC+TGG 0.512195 8_1:-62260590 None:intergenic
AGCTATGTCATTTGCTCCGA+AGG 0.512623 8_1:+62259190 Msa1205790:CDS
GAAGTTAGAAAGAAAACTGT+GGG 0.512943 8_1:+62258052 Msa1205790:five_prime_UTR
AATTGTTAGGGGAATGAGAT+GGG 0.515509 8_1:+62261163 Msa1205790:CDS
AACAGTTGATTCTTATCAAG+AGG 0.515523 8_1:+62260120 Msa1205790:CDS
GCTCGGTCTTGCTCTTGGCA+AGG 0.517894 8_1:-62258370 None:intergenic
GTGTTCAAATTTCCAGGTGG+AGG 0.519025 8_1:+62258604 Msa1205790:CDS
TAAGAATCAACTGTTACGCC+TGG 0.523031 8_1:-62260112 None:intergenic
CAAGCATCTGACAGTGGAGA+AGG 0.525351 8_1:+62258549 Msa1205790:CDS
TCAAAGGCTCGTGATGGGAA+TGG 0.531393 8_1:-62259293 None:intergenic
GTACAAACTAAATAAACCAT+TGG 0.532852 8_1:-62260568 None:intergenic
TCTTATTTACCTTCAATGCA+AGG 0.533350 8_1:-62258210 None:intergenic
TAAAGTGTTCTCAGCAATTG+TGG 0.533656 8_1:-62260299 None:intergenic
ATTATGCAGGTTGCGAGTTG+GGG 0.534569 8_1:+62259140 Msa1205790:intron
ATTGAAGGTAAATAAGATGC+AGG 0.535476 8_1:+62258216 Msa1205790:CDS
CACTAGATATCGGAATGTAA+TGG 0.536983 8_1:+62260204 Msa1205790:CDS
GCTGGTTACCTCGGGGATAG+GGG 0.539426 8_1:-62260005 None:intergenic
TTCTCGTTGTCTAATACCAT+GGG 0.539833 8_1:+62259328 Msa1205790:CDS
GACATATCAAAGGCTCGTGA+TGG 0.541258 8_1:-62259299 None:intergenic
ATCTAAAATGGTGGATCATG+AGG 0.541586 8_1:+62261187 Msa1205790:CDS
ATTTCTACATATTTGTGTTG+GGG 0.545040 8_1:-62258280 None:intergenic
GCTAGCTTATGACTCTCTGT+CGG 0.546413 8_1:+62256694 Msa1205790:five_prime_UTR
TGGTTTATTTAGTTTGTACC+AGG 0.546436 8_1:+62260572 Msa1205790:CDS
TTATATGAGATGAGATGAGA+TGG 0.547191 8_1:-62256807 None:intergenic
ATATCTTCTCGGGTGCAAAT+GGG 0.548383 8_1:-62261214 None:intergenic
GCCTCATTCCTGCTCCCGAA+GGG 0.551559 8_1:+62258464 Msa1205790:CDS
ACCCTTCGGGAGCAGGAATG+AGG 0.552400 8_1:-62258465 None:intergenic
AAAGTGTTCTCAGCAATTGT+GGG 0.555554 8_1:-62260298 None:intergenic
CATATTAAGGCCAGAAGGAT+CGG 0.556558 8_1:+62261097 Msa1205790:CDS
TTCAGTTTGCATTGGAACGA+GGG 0.556579 8_1:+62259231 Msa1205790:CDS
AAAACATGATCTATAGGGAA+AGG 0.562202 8_1:+62258410 Msa1205790:CDS
AATTGAAGAAGTTTCCTGCT+AGG 0.562951 8_1:+62260050 Msa1205790:CDS
TGATTATGCAGGTTGCGAGT+TGG 0.564155 8_1:+62259138 Msa1205790:intron
TCGGTTATTCCAATCAAAGA+TGG 0.565140 8_1:+62258673 Msa1205790:CDS
GCAAAGCAGTGGTTCCGGAA+AGG 0.568170 8_1:+62258180 Msa1205790:CDS
GCGAACGAAGGAGGATCTGA+AGG 0.569849 8_1:+62259639 Msa1205790:CDS
ATGAGATGAGATGAGATGGG+AGG 0.573294 8_1:-62256803 None:intergenic
CGTCTTTAGCTATTCTAGGA+GGG 0.573557 8_1:-62260084 None:intergenic
CCAAGAACACCAATAATAGC+AGG 0.574717 8_1:-62259257 None:intergenic
AATGTAATGGACATGAATGC+AGG 0.577859 8_1:+62260217 Msa1205790:CDS
ATCCTTCTGGCCTTAATATG+CGG 0.578717 8_1:-62261094 None:intergenic
TGGGAAAAGAAGTATGAAAA+GGG 0.579153 8_1:+62259703 Msa1205790:CDS
ATCGGCTCCTTGAGGGAACA+TGG 0.579987 8_1:-62258629 None:intergenic
AAGGCATTGTCCACCTCAAG+AGG 0.580231 8_1:+62258429 Msa1205790:CDS
AAAGAGAGAATAGAGATCCC+AGG 0.584213 8_1:-62256973 None:intergenic
ACGTCTTTAGCTATTCTAGG+AGG 0.584489 8_1:-62260085 None:intergenic
ACATATCAAAGGCTCGTGAT+GGG 0.586233 8_1:-62259298 None:intergenic
TCTAGCCGAAAGTCTTTGCT+GGG 0.586847 8_1:+62259684 Msa1205790:CDS
CATTACATTCCGATATCTAG+TGG 0.587708 8_1:-62260203 None:intergenic
AGCTTATGACTCTCTGTCGG+TGG 0.588252 8_1:+62256697 Msa1205790:five_prime_UTR
GTTCAGTTTGCATTGGAACG+AGG 0.591548 8_1:+62259230 Msa1205790:CDS
TATATGAGATGAGATGAGAT+GGG 0.591626 8_1:-62256806 None:intergenic
TGGTACTGTCAGAACAGCAT+TGG 0.594187 8_1:+62258693 Msa1205790:CDS
CTCGTGATGGGAATGGAAGA+CGG 0.594874 8_1:-62259286 None:intergenic
CGAAGTTGATGTGATTAACA+AGG 0.596587 8_1:+62261133 Msa1205790:CDS
GTGATCTACTATACCAGACC+TGG 0.598652 8_1:+62256955 Msa1205790:five_prime_UTR
TTGGGAACATGGCAAAGCAG+TGG 0.599535 8_1:+62258169 Msa1205790:CDS
GTGCAGCTGCAAATCCTCCA+AGG 0.600414 8_1:-62260240 None:intergenic
GGAAAACGTACTACCAAACA+TGG 0.600730 8_1:+62259614 Msa1205790:CDS
AAAACTGGGTGAAATTTGAA+GGG 0.602703 8_1:+62258578 Msa1205790:CDS
AGAAGACTAGTGTTGACAGT+TGG 0.603995 8_1:-62256774 None:intergenic
AGCATTGGACACTGGTTGCG+GGG 0.605572 8_1:+62258708 Msa1205790:CDS
AGAAGTTAGAAAGAAAACTG+TGG 0.607228 8_1:+62258051 Msa1205790:five_prime_UTR
AAATTGTTAGGGGAATGAGA+TGG 0.612828 8_1:+62261162 Msa1205790:CDS
GAGATGGGAATCTAAAATGG+TGG 0.616902 8_1:+62261178 Msa1205790:CDS
GTCAGAACAGCATTGGACAC+TGG 0.619837 8_1:+62258700 Msa1205790:CDS
AAGCTCATCAATATACGCAT+CGG 0.620380 8_1:-62258647 None:intergenic
AACATGGAAGCGAACGAAGG+AGG 0.623111 8_1:+62259630 Msa1205790:CDS
AAAATGGTGGATCATGAGGA+TGG 0.624067 8_1:+62261191 Msa1205790:CDS
GGAGGAACCATGTTCCCTCA+AGG 0.625347 8_1:+62258622 Msa1205790:CDS
CACTTTGGCTGGTTACCTCG+GGG 0.630898 8_1:-62260012 None:intergenic
GTATATTGATGAGCTTGCAT+CGG 0.639331 8_1:+62258654 Msa1205790:CDS
ATATACGCATCGGCTCCTTG+AGG 0.645967 8_1:-62258637 None:intergenic
GACCGCATATTAAGGCCAGA+AGG 0.646017 8_1:+62261092 Msa1205790:CDS
GGAGAAGGCTAATCAAAACT+GGG 0.651414 8_1:+62258564 Msa1205790:CDS
CCAAACATGGAAGCGAACGA+AGG 0.652207 8_1:+62259627 Msa1205790:CDS
TAGCATAGTAGGCATAATCA+CGG 0.653977 8_1:-62258516 None:intergenic
GATAAAATCCAAAATCCACC+AGG 0.658663 8_1:-62259574 None:intergenic
TCAGTTTGCATTGGAACGAG+GGG 0.665623 8_1:+62259232 Msa1205790:CDS
AGCACAGCGAAAATTGACAA+AGG 0.667719 8_1:-62258121 None:intergenic
AAGGTTCAGAAAATTGTTAG+GGG 0.677847 8_1:+62261152 Msa1205790:CDS
TCCTTACAAGCATCTGACAG+TGG 0.686028 8_1:+62258543 Msa1205790:CDS
TGATCTACTATACCAGACCT+GGG 0.687686 8_1:+62256956 Msa1205790:five_prime_UTR
AGCCAAAGTGAAGTTGCCGG+AGG 0.689567 8_1:+62260025 Msa1205790:CDS
TGAAAAGAGAGACAGTAGCA+AGG 0.690857 8_1:-62256930 None:intergenic
AGAACACTGAGACATATCAA+AGG 0.695313 8_1:-62259309 None:intergenic
AGGGCGATATCGCTATCTGG+AGG 0.701556 8_1:+62259722 Msa1205790:CDS
CTACTTGTACACAAACACAA+AGG 0.705335 8_1:+62256727 Msa1205790:five_prime_UTR
TAATCACATCAACTTCGTCG+CGG 0.731217 8_1:-62261127 None:intergenic
AATGTGTTCAAATTTCCAGG+TGG 0.732268 8_1:+62258601 Msa1205790:CDS
CTGCAAAACCCCTATCCCCG+AGG 0.738570 8_1:+62259997 Msa1205790:CDS
AAGTTAGAAAGAAAACTGTG+GGG 0.770224 8_1:+62258053 Msa1205790:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAAACTGATATTTA+TGG + chr8_1:62260448-62260467 Msa1205790:intron 10.0%
!! AAAAAAATAAGTTATACACA+TGG + chr8_1:62257813-62257832 Msa1205790:intron 15.0%
!! AAATAACATACTATATCAAA+AGG - chr8_1:62258755-62258774 None:intergenic 15.0%
!! TAATTATGTGTAATGTATAA+TGG + chr8_1:62258941-62258960 Msa1205790:intron 15.0%
!! AATTATGTGTAATGTATAAT+GGG + chr8_1:62258942-62258961 Msa1205790:intron 15.0%
!! ATGATTATATTTAGAAGTTA+AGG - chr8_1:62259443-62259462 None:intergenic 15.0%
!! TTATCTAAATCACATAAATT+GGG - chr8_1:62259784-62259803 None:intergenic 15.0%
!! ATTATCTAAATCACATAAAT+TGG - chr8_1:62259785-62259804 None:intergenic 15.0%
!! AAAAGAATTAATAGATTGAT+CGG + chr8_1:62260178-62260197 Msa1205790:CDS 15.0%
!!! AATTAATCATTTTAGAGTAT+AGG - chr8_1:62260435-62260454 None:intergenic 15.0%
!!! TATTTATGGATATTTTGTTA+TGG + chr8_1:62260462-62260481 Msa1205790:intron 15.0%
!!! TAGTTTTCTTTAATTGATTT+TGG + chr8_1:62261507-62261526 Msa1205790:three_prime_UTR 15.0%
!!! TATATTGGCTAAAATTATTT+GGG - chr8_1:62261564-62261583 None:intergenic 15.0%
!!! ATATATTGGCTAAAATTATT+TGG - chr8_1:62261565-62261584 None:intergenic 15.0%
!! CTTTATAACTTATAGTTAAG+TGG - chr8_1:62256887-62256906 None:intergenic 20.0%
!! TGTTGAATTGTAAGATAAAT+GGG - chr8_1:62257068-62257087 None:intergenic 20.0%
!! ATGTTGAATTGTAAGATAAA+TGG - chr8_1:62257069-62257088 None:intergenic 20.0%
!!! TGTTGTTTGTTTTATCTTTT+GGG + chr8_1:62258151-62258170 Msa1205790:CDS 20.0%
!! AATTTCTACATATTTGTGTT+GGG - chr8_1:62258284-62258303 None:intergenic 20.0%
!! AAATTTGACATCAAATTTGA+TGG + chr8_1:62258803-62258822 Msa1205790:intron 20.0%
!! GATGATTAATGAATATAACA+AGG + chr8_1:62258861-62258880 Msa1205790:intron 20.0%
!! TTAAACACATTTGAAAATTG+TGG - chr8_1:62258924-62258943 None:intergenic 20.0%
!! ATTATGTGTAATGTATAATG+GGG + chr8_1:62258943-62258962 Msa1205790:intron 20.0%
!! TTGATACCATCTTAAAATTT+AGG - chr8_1:62260856-62260875 None:intergenic 20.0%
!!! TTTTCTTTAATTGATTTTGG+AGG + chr8_1:62261510-62261529 Msa1205790:three_prime_UTR 20.0%
!! TCAACATCAACAAAATATAT+TGG - chr8_1:62261579-62261598 None:intergenic 20.0%
! TAACAAAACAAGAGAGATTT+GGG + chr8_1:62257213-62257232 Msa1205790:intron 25.0%
! AGACCCAATAATATCTAAAA+GGG - chr8_1:62257409-62257428 None:intergenic 25.0%
!!! GTTGTTTTTATAAGCTAGAT+TGG + chr8_1:62257571-62257590 Msa1205790:intron 25.0%
!!! TAGAGTGTAGTTTTGTATAT+TGG - chr8_1:62257721-62257740 None:intergenic 25.0%
! TAGTTGTGCATCATATAATA+AGG + chr8_1:62257785-62257804 Msa1205790:intron 25.0%
! AGTTGTGCATCATATAATAA+GGG + chr8_1:62257786-62257805 Msa1205790:intron 25.0%
!! TATTATTCAGTAGTTCTATG+TGG + chr8_1:62257942-62257961 Msa1205790:intron 25.0%
!!! ATTTTAGTGTGAACTTTCAT+AGG + chr8_1:62258014-62258033 Msa1205790:intron 25.0%
!!! GTGTTGTTTGTTTTATCTTT+TGG + chr8_1:62258150-62258169 Msa1205790:CDS 25.0%
! ATTTCTACATATTTGTGTTG+GGG - chr8_1:62258283-62258302 None:intergenic 25.0%
! CAATTTCTACATATTTGTGT+TGG - chr8_1:62258285-62258304 None:intergenic 25.0%
!! TATAGATCATGTTTTCTCTA+GGG - chr8_1:62258405-62258424 None:intergenic 25.0%
! TAGAGAAAACATGATCTATA+GGG + chr8_1:62258405-62258424 Msa1205790:CDS 25.0%
! ACACTGAAAATTGAGAAATT+TGG - chr8_1:62258985-62259004 None:intergenic 25.0%
! TGTATTTAGTATACTGAAGT+CGG + chr8_1:62259002-62259021 Msa1205790:intron 25.0%
! GTAAGCATTAAAACAAAGAA+AGG - chr8_1:62259038-62259057 None:intergenic 25.0%
!!! TTCTTTGTTTTAATGCTTAC+TGG + chr8_1:62259038-62259057 Msa1205790:intron 25.0%
!! GATCTAGAATACAGTATTAT+CGG + chr8_1:62259391-62259410 Msa1205790:intron 25.0%
!! TAGTACGTTTTCCAATTAAT+TGG - chr8_1:62259607-62259626 None:intergenic 25.0%
! TTCATATAATTCCACGATTT+CGG + chr8_1:62259901-62259920 Msa1205790:intron 25.0%
! TAATGGTAGGTACAAAAAAA+TGG + chr8_1:62259970-62259989 Msa1205790:intron 25.0%
! ACTTGAATCACAAAAATCTT+GGG + chr8_1:62260261-62260280 Msa1205790:CDS 25.0%
! GTACAAACTAAATAAACCAT+TGG - chr8_1:62260571-62260590 None:intergenic 25.0%
!!! TTTACTGATTTTTCCAATTC+TGG + chr8_1:62260707-62260726 Msa1205790:intron 25.0%
!! CCACTTATAAACATATTTTC+AGG - chr8_1:62260780-62260799 None:intergenic 25.0%
! CCTGAAAATATGTTTATAAG+TGG + chr8_1:62260777-62260796 Msa1205790:intron 25.0%
! AAGTCTATTCAAGATTTCAT+TGG + chr8_1:62260875-62260894 Msa1205790:intron 25.0%
!!! TGTTTTTTTTCCTAGAATTC+GGG - chr8_1:62260964-62260983 None:intergenic 25.0%
!!! CTGTTTTTTTTCCTAGAATT+CGG - chr8_1:62260965-62260984 None:intergenic 25.0%
! TACAATAACCAATATCTTCT+CGG - chr8_1:62261228-62261247 None:intergenic 25.0%
!! TGGTTATTGTAAAAGAGTAT+TGG + chr8_1:62261237-62261256 Msa1205790:CDS 25.0%
!!! GGTTATTGTAAAAGAGTATT+GGG + chr8_1:62261238-62261257 Msa1205790:CDS 25.0%
TATATGAGATGAGATGAGAT+GGG - chr8_1:62256809-62256828 None:intergenic 30.0%
TTATATGAGATGAGATGAGA+TGG - chr8_1:62256810-62256829 None:intergenic 30.0%
! ATCTCTATTCTCTCTTTTCA+AGG + chr8_1:62256979-62256998 Msa1205790:five_prime_UTR 30.0%
! TTTTTATCAGCCAACTTTTC+TGG + chr8_1:62257147-62257166 Msa1205790:intron 30.0%
! TTTTATCAGCCAACTTTTCT+GGG + chr8_1:62257148-62257167 Msa1205790:intron 30.0%
CTAACAAAACAAGAGAGATT+TGG + chr8_1:62257212-62257231 Msa1205790:intron 30.0%
AACAAAACAAGAGAGATTTG+GGG + chr8_1:62257214-62257233 Msa1205790:intron 30.0%
ATACAAAAACAGACATGCAA+GGG - chr8_1:62257358-62257377 None:intergenic 30.0%
! TCCTCCCTTTTAGATATTAT+TGG + chr8_1:62257402-62257421 Msa1205790:intron 30.0%
! CCTCCCTTTTAGATATTATT+GGG + chr8_1:62257403-62257422 Msa1205790:intron 30.0%
CAGACCCAATAATATCTAAA+AGG - chr8_1:62257410-62257429 None:intergenic 30.0%
TAGATATTATTGGGTCTGTT+TGG + chr8_1:62257412-62257431 Msa1205790:intron 30.0%
CTTATGAATAAGCTTGCATA+AGG + chr8_1:62257494-62257513 Msa1205790:intron 30.0%
!! TAAGTTTTGTGAGACTGTTT+GGG - chr8_1:62257661-62257680 None:intergenic 30.0%
!! ATAAGTTTTGTGAGACTGTT+TGG - chr8_1:62257662-62257681 None:intergenic 30.0%
GTTTCTTTCTAAATCAGACA+TGG + chr8_1:62257856-62257875 Msa1205790:intron 30.0%
!!! GTGGTTTTCTTGATTTGTTA+TGG + chr8_1:62257961-62257980 Msa1205790:intron 30.0%
AGAAGTTAGAAAGAAAACTG+TGG + chr8_1:62258051-62258070 Msa1205790:five_prime_UTR 30.0%
GAAGTTAGAAAGAAAACTGT+GGG + chr8_1:62258052-62258071 Msa1205790:five_prime_UTR 30.0%
AAGTTAGAAAGAAAACTGTG+GGG + chr8_1:62258053-62258072 Msa1205790:five_prime_UTR 30.0%
!! TGTTTTATCTTTTGGGAACA+TGG + chr8_1:62258158-62258177 Msa1205790:CDS 30.0%
! TCTTATTTACCTTCAATGCA+AGG - chr8_1:62258213-62258232 None:intergenic 30.0%
ATTGAAGGTAAATAAGATGC+AGG + chr8_1:62258216-62258235 Msa1205790:CDS 30.0%
TGGGGTTCAAAATTCAAATT+CGG - chr8_1:62258265-62258284 None:intergenic 30.0%
! CTATAGATCATGTTTTCTCT+AGG - chr8_1:62258406-62258425 None:intergenic 30.0%
CTAGAGAAAACATGATCTAT+AGG + chr8_1:62258404-62258423 Msa1205790:CDS 30.0%
AAAACATGATCTATAGGGAA+AGG + chr8_1:62258410-62258429 Msa1205790:CDS 30.0%
AAAACTGGGTGAAATTTGAA+GGG + chr8_1:62258578-62258597 Msa1205790:CDS 30.0%
!! TATAATGGGGTTTTGTCTAT+TGG + chr8_1:62258956-62258975 Msa1205790:intron 30.0%
ACAATCAAGAAGCAATTGAA+AGG - chr8_1:62259098-62259117 None:intergenic 30.0%
! ACGTTTTCCAATTAATTGGA+GGG - chr8_1:62259603-62259622 None:intergenic 30.0%
! TACGTTTTCCAATTAATTGG+AGG - chr8_1:62259604-62259623 None:intergenic 30.0%
! TGGGAAAAGAAGTATGAAAA+GGG + chr8_1:62259703-62259722 Msa1205790:CDS 30.0%
! TAGATAATGCTGATGATGTT+TGG + chr8_1:62259797-62259816 Msa1205790:CDS 30.0%
GAAGTGTGTAAAAATGATCA+GGG - chr8_1:62259827-62259846 None:intergenic 30.0%
TGAAGTGTGTAAAAATGATC+AGG - chr8_1:62259828-62259847 None:intergenic 30.0%
! GTACCTACCATTACAAATTT+TGG - chr8_1:62259963-62259982 None:intergenic 30.0%
ATAACGTCTTTAGCTATTCT+AGG - chr8_1:62260091-62260110 None:intergenic 30.0%
! AACAGTTGATTCTTATCAAG+AGG + chr8_1:62260120-62260139 Msa1205790:CDS 30.0%
ATCAAGAGGACAACAAATTA+TGG + chr8_1:62260134-62260153 Msa1205790:CDS 30.0%
CACTTGAATCACAAAAATCT+TGG + chr8_1:62260260-62260279 Msa1205790:CDS 30.0%
! TTAGGTGTTATCTATGAAAG+AGG + chr8_1:62260319-62260338 Msa1205790:CDS 30.0%
TCATTGGTATTTATCATGAC+TGG + chr8_1:62260344-62260363 Msa1205790:CDS 30.0%
TGAATAAGATCATATGTCCT+TGG - chr8_1:62260546-62260565 None:intergenic 30.0%
TATGATCTTATTCATGCCAA+TGG + chr8_1:62260552-62260571 Msa1205790:CDS 30.0%
!! TGGTTTATTTAGTTTGTACC+AGG + chr8_1:62260572-62260591 Msa1205790:CDS 30.0%
ATTATCACTATGATCACTTG+TGG - chr8_1:62260623-62260642 None:intergenic 30.0%
CAAGTGATCATAGTGATAAT+TGG + chr8_1:62260623-62260642 Msa1205790:intron 30.0%
AGTCTCAATTATACCAGAAT+TGG - chr8_1:62260723-62260742 None:intergenic 30.0%
GTCTAATCTTATCAAATGTG+GGG - chr8_1:62260758-62260777 None:intergenic 30.0%
GGTCTAATCTTATCAAATGT+GGG - chr8_1:62260759-62260778 None:intergenic 30.0%
AGGTCTAATCTTATCAAATG+TGG - chr8_1:62260760-62260779 None:intergenic 30.0%
TCTTACAAAATCAGCTTGTA+AGG - chr8_1:62260816-62260835 None:intergenic 30.0%
!! GTATTGTTGATTTGATTGAC+AGG + chr8_1:62261039-62261058 Msa1205790:intron 30.0%
ACAAGGTTCAGAAAATTGTT+AGG + chr8_1:62261150-62261169 Msa1205790:CDS 30.0%
CAAGGTTCAGAAAATTGTTA+GGG + chr8_1:62261151-62261170 Msa1205790:CDS 30.0%
AAGGTTCAGAAAATTGTTAG+GGG + chr8_1:62261152-62261171 Msa1205790:CDS 30.0%
ACAATAACCAATATCTTCTC+GGG - chr8_1:62261227-62261246 None:intergenic 30.0%
!! ATTGTAAAAGAGTATTGGGT+TGG + chr8_1:62261242-62261261 Msa1205790:CDS 30.0%
!!! TGTTCTTTTAGAACTCTAAC+TGG - chr8_1:62261288-62261307 None:intergenic 30.0%
CATGAATAGTCATCAAAGAT+TGG + chr8_1:62261306-62261325 Msa1205790:three_prime_UTR 30.0%
TTCCATTTCTTCTTTGCTTT+GGG - chr8_1:62261356-62261375 None:intergenic 30.0%
TTTCCATTTCTTCTTTGCTT+TGG - chr8_1:62261357-62261376 None:intergenic 30.0%
AACCAATTGCAAGCAAAAAT+CGG + chr8_1:62261413-62261432 Msa1205790:three_prime_UTR 30.0%
ACAGTTCTACACTTGATTAA+AGG - chr8_1:62261463-62261482 None:intergenic 30.0%
! TGTGTTCATTTTACCAAGTT+TGG + chr8_1:62261674-62261693 Msa1205790:three_prime_UTR 30.0%
! TCATTTTACCAAGTTTGGTA+TGG + chr8_1:62261679-62261698 Msa1205790:three_prime_UTR 30.0%
CTACTTGTACACAAACACAA+AGG + chr8_1:62256727-62256746 Msa1205790:five_prime_UTR 35.0%
AAGAGAAAACCCAGAAAAGT+TGG - chr8_1:62257160-62257179 None:intergenic 35.0%
! CTTTTCTGGGTTTTCTCTTT+TGG + chr8_1:62257161-62257180 Msa1205790:intron 35.0%
!!! CTCTCTTGTTTTGTTAGATC+AGG - chr8_1:62257209-62257228 None:intergenic 35.0%
TACAAAAACAGACATGCAAG+GGG - chr8_1:62257357-62257376 None:intergenic 35.0%
CATACAAAAACAGACATGCA+AGG - chr8_1:62257359-62257378 None:intergenic 35.0%
CCCAATAATATCTAAAAGGG+AGG - chr8_1:62257406-62257425 None:intergenic 35.0%
AAGATGAAGTGACGCTAAAT+TGG + chr8_1:62257531-62257550 Msa1205790:intron 35.0%
TCAAATAAGCCATTCCAAAC+AGG + chr8_1:62257695-62257714 Msa1205790:intron 35.0%
!! GTTTTGTATATTGGCCTGTT+TGG - chr8_1:62257712-62257731 None:intergenic 35.0%
!! GGATTCTGTATCTTTTTAGC+TGG + chr8_1:62257834-62257853 Msa1205790:intron 35.0%
AAAGAAAACTGTGGGGTTAA+TGG + chr8_1:62258060-62258079 Msa1205790:exon 35.0%
AAGAAAACTGTGGGGTTAAT+GGG + chr8_1:62258061-62258080 Msa1205790:exon 35.0%
!!! GAACATTTTAGCTTTCGGTT+CGG - chr8_1:62258317-62258336 None:intergenic 35.0%
ACCGAAAGCTAAAATGTTCA+AGG + chr8_1:62258318-62258337 Msa1205790:CDS 35.0%
!!! GCCTTGAACATTTTAGCTTT+CGG - chr8_1:62258322-62258341 None:intergenic 35.0%
TAGCATAGTAGGCATAATCA+CGG - chr8_1:62258519-62258538 None:intergenic 35.0%
GTAAGGAACATTAGCATAGT+AGG - chr8_1:62258530-62258549 None:intergenic 35.0%
CAAAACTGGGTGAAATTTGA+AGG + chr8_1:62258577-62258596 Msa1205790:CDS 35.0%
AATGTGTTCAAATTTCCAGG+TGG + chr8_1:62258601-62258620 Msa1205790:CDS 35.0%
AAGCTCATCAATATACGCAT+CGG - chr8_1:62258650-62258669 None:intergenic 35.0%
GTATATTGATGAGCTTGCAT+CGG + chr8_1:62258654-62258673 Msa1205790:CDS 35.0%
TCGGTTATTCCAATCAAAGA+TGG + chr8_1:62258673-62258692 Msa1205790:CDS 35.0%
ATGGTTACTATTCAGATGTG+TGG + chr8_1:62258822-62258841 Msa1205790:intron 35.0%
ATACTGAAAGGAAGTAAACC+GGG - chr8_1:62259072-62259091 None:intergenic 35.0%
CATACTGAAAGGAAGTAAAC+CGG - chr8_1:62259073-62259092 None:intergenic 35.0%
! ATTGAAAGGTGCATACTGAA+AGG - chr8_1:62259084-62259103 None:intergenic 35.0%
ATAAGCGTGAATGATTATGC+AGG + chr8_1:62259127-62259146 Msa1205790:intron 35.0%
AGAACACTGAGACATATCAA+AGG - chr8_1:62259312-62259331 None:intergenic 35.0%
TTCTCGTTGTCTAATACCAT+GGG + chr8_1:62259328-62259347 Msa1205790:CDS 35.0%
ACCCAATAATTGAATGCAGA+GGG + chr8_1:62259517-62259536 Msa1205790:intron 35.0%
!! TGGAAGTTGATCGAGTTTTA+AGG + chr8_1:62259551-62259570 Msa1205790:CDS 35.0%
GATAAAATCCAAAATCCACC+AGG - chr8_1:62259577-62259596 None:intergenic 35.0%
!! GGTGGATTTTGGATTTTATC+TGG + chr8_1:62259577-62259596 Msa1205790:CDS 35.0%
! CTGGGAAAAGAAGTATGAAA+AGG + chr8_1:62259702-62259721 Msa1205790:CDS 35.0%
!!! CCATTACAAATTTTGGAGCA+TGG - chr8_1:62259956-62259975 None:intergenic 35.0%
CCATGCTCCAAAATTTGTAA+TGG + chr8_1:62259953-62259972 Msa1205790:intron 35.0%
GCTCCAAAATTTGTAATGGT+AGG + chr8_1:62259957-62259976 Msa1205790:intron 35.0%
TGGTAGGTACAAAAAAATGG+AGG + chr8_1:62259973-62259992 Msa1205790:intron 35.0%
AAACTTCTTCAATTCTCCTC+CGG - chr8_1:62260044-62260063 None:intergenic 35.0%
AATTGAAGAAGTTTCCTGCT+AGG + chr8_1:62260050-62260069 Msa1205790:CDS 35.0%
ATAGCTAAAGACGTTATTCC+AGG + chr8_1:62260094-62260113 Msa1205790:CDS 35.0%
CATTACATTCCGATATCTAG+TGG - chr8_1:62260206-62260225 None:intergenic 35.0%
CACTAGATATCGGAATGTAA+TGG + chr8_1:62260204-62260223 Msa1205790:CDS 35.0%
!! AATGTAATGGACATGAATGC+AGG + chr8_1:62260217-62260236 Msa1205790:CDS 35.0%
! AAAGTGTTCTCAGCAATTGT+GGG - chr8_1:62260301-62260320 None:intergenic 35.0%
! TAAAGTGTTCTCAGCAATTG+TGG - chr8_1:62260302-62260321 None:intergenic 35.0%
ACAATTGCTGAGAACACTTT+AGG + chr8_1:62260301-62260320 Msa1205790:CDS 35.0%
ATCTATGAAAGAGGTCTCAT+TGG + chr8_1:62260328-62260347 Msa1205790:CDS 35.0%
! GACATTCGTTTTCTTTCTTC+AGG + chr8_1:62260499-62260518 Msa1205790:intron 35.0%
! TTTTCTTTCTTCAGGTGTGA+AGG + chr8_1:62260507-62260526 Msa1205790:intron 35.0%
! AAGGCTTTTCTACATATCCA+AGG + chr8_1:62260526-62260545 Msa1205790:CDS 35.0%
!! GCTCGACCTAAATTTTAAGA+TGG + chr8_1:62260847-62260866 Msa1205790:intron 35.0%
! TCTCTAAAAGGATGTCTTCT+AGG - chr8_1:62261070-62261089 None:intergenic 35.0%
!! AGAAGACATCCTTTTAGAGA+TGG + chr8_1:62261070-62261089 Msa1205790:CDS 35.0%
!! CGAAGTTGATGTGATTAACA+AGG + chr8_1:62261133-62261152 Msa1205790:CDS 35.0%
AAATTGTTAGGGGAATGAGA+TGG + chr8_1:62261162-62261181 Msa1205790:CDS 35.0%
AATTGTTAGGGGAATGAGAT+GGG + chr8_1:62261163-62261182 Msa1205790:CDS 35.0%
AACCCAAAGCAAAGAAGAAA+TGG + chr8_1:62261351-62261370 Msa1205790:three_prime_UTR 35.0%
!! AACCGATTTTTGCTTGCAAT+TGG - chr8_1:62261418-62261437 None:intergenic 35.0%
! TACCAAGTTTGGTATGGTTT+TGG + chr8_1:62261685-62261704 Msa1205790:three_prime_UTR 35.0%
TGAACTTTGCAAAGCTAAGT+AGG - chr8_1:62261761-62261780 None:intergenic 35.0%
AGCTTTGCAAAGTTCAAGTA+TGG + chr8_1:62261765-62261784 Msa1205790:three_prime_UTR 35.0%
!! AGAAGACTAGTGTTGACAGT+TGG - chr8_1:62256777-62256796 None:intergenic 40.0%
TGAAAAGAGAGACAGTAGCA+AGG - chr8_1:62256933-62256952 None:intergenic 40.0%
TGATCTACTATACCAGACCT+GGG + chr8_1:62256956-62256975 Msa1205790:five_prime_UTR 40.0%
AAAGAGAGAATAGAGATCCC+AGG - chr8_1:62256976-62256995 None:intergenic 40.0%
! GTATATTGGCCTGTTTGGAA+TGG - chr8_1:62257707-62257726 None:intergenic 40.0%
!! GGGTTCTAAAAATGCCTTAC+CGG + chr8_1:62258081-62258100 Msa1205790:CDS 40.0%
!! GGTTCTAAAAATGCCTTACC+GGG + chr8_1:62258082-62258101 Msa1205790:CDS 40.0%
AGCACAGCGAAAATTGACAA+AGG - chr8_1:62258124-62258143 None:intergenic 40.0%
! CAACGCAATTTTTCCTCTTG+AGG - chr8_1:62258445-62258464 None:intergenic 40.0%
! TAGGCATAATCACGGCTTTT+AGG - chr8_1:62258511-62258530 None:intergenic 40.0%
TGGAGAAGGCTAATCAAAAC+TGG + chr8_1:62258563-62258582 Msa1205790:CDS 40.0%
GGAGAAGGCTAATCAAAACT+GGG + chr8_1:62258564-62258583 Msa1205790:CDS 40.0%
GGGAATGTGTTCAAATTTCC+AGG + chr8_1:62258598-62258617 Msa1205790:CDS 40.0%
CTGACAGTACCATCTTTGAT+TGG - chr8_1:62258685-62258704 None:intergenic 40.0%
TTGTGGTTAATTGTGCTCAG+TGG - chr8_1:62258907-62258926 None:intergenic 40.0%
TGTGCTTCATGGTTATCCTT+CGG - chr8_1:62259209-62259228 None:intergenic 40.0%
CAAACTGAACTTGTGCTTCA+TGG - chr8_1:62259220-62259239 None:intergenic 40.0%
AGCACAAGTTCAGTTTGCAT+TGG + chr8_1:62259223-62259242 Msa1205790:CDS 40.0%
TTCAGTTTGCATTGGAACGA+GGG + chr8_1:62259231-62259250 Msa1205790:CDS 40.0%
CCAAGAACACCAATAATAGC+AGG - chr8_1:62259260-62259279 None:intergenic 40.0%
! CCTGCTATTATTGGTGTTCT+TGG + chr8_1:62259257-62259276 Msa1205790:CDS 40.0%
ACATATCAAAGGCTCGTGAT+GGG - chr8_1:62259301-62259320 None:intergenic 40.0%
GTTCTCGTTGTCTAATACCA+TGG + chr8_1:62259327-62259346 Msa1205790:CDS 40.0%
! CTAATACCATGGGCTGAAAA+TGG + chr8_1:62259338-62259357 Msa1205790:CDS 40.0%
CACCCAATAATTGAATGCAG+AGG + chr8_1:62259516-62259535 Msa1205790:intron 40.0%
GCCCTCTGCATTCAATTATT+GGG - chr8_1:62259521-62259540 None:intergenic 40.0%
TGCCCTCTGCATTCAATTAT+TGG - chr8_1:62259522-62259541 None:intergenic 40.0%
!!! TTTTAAGGCCTGGTGGATTT+TGG + chr8_1:62259566-62259585 Msa1205790:CDS 40.0%
TATCTGGCCCTCCAATTAAT+TGG + chr8_1:62259593-62259612 Msa1205790:CDS 40.0%
GGAAAACGTACTACCAAACA+TGG + chr8_1:62259614-62259633 Msa1205790:CDS 40.0%
! CTTTTCCCAGCAAAGACTTT+CGG - chr8_1:62259692-62259711 None:intergenic 40.0%
CGCATTATAATCCGAAATCG+TGG - chr8_1:62259915-62259934 None:intergenic 40.0%
! CGTCTTTAGCTATTCTAGGA+GGG - chr8_1:62260087-62260106 None:intergenic 40.0%
ACGTCTTTAGCTATTCTAGG+AGG - chr8_1:62260088-62260107 None:intergenic 40.0%
TAAGAATCAACTGTTACGCC+TGG - chr8_1:62260115-62260134 None:intergenic 40.0%
!! TATAGGAAGCTGACTTGCAA+GGG - chr8_1:62260418-62260437 None:intergenic 40.0%
AGGAAGAAACTTACTTGTCC+TGG - chr8_1:62260593-62260612 None:intergenic 40.0%
TGATCACTTGTGGATGGAAA+AGG - chr8_1:62260613-62260632 None:intergenic 40.0%
TCACTATGATCACTTGTGGA+TGG - chr8_1:62260619-62260638 None:intergenic 40.0%
CAAAATCAGCTTGTAAGGTG+AGG - chr8_1:62260811-62260830 None:intergenic 40.0%
! AATTCGGGTTAGATTAGGAC+TGG - chr8_1:62260949-62260968 None:intergenic 40.0%
! CCTAGAATTCGGGTTAGATT+AGG - chr8_1:62260954-62260973 None:intergenic 40.0%
CCTAATCTAACCCGAATTCT+AGG + chr8_1:62260951-62260970 Msa1205790:intron 40.0%
ATATGCGGTCCATCTCTAAA+AGG - chr8_1:62261082-62261101 None:intergenic 40.0%
TAGAGATGGACCGCATATTA+AGG + chr8_1:62261084-62261103 Msa1205790:CDS 40.0%
!! ATCCTTCTGGCCTTAATATG+CGG - chr8_1:62261097-62261116 None:intergenic 40.0%
CATATTAAGGCCAGAAGGAT+CGG + chr8_1:62261097-62261116 Msa1205790:CDS 40.0%
TAATCACATCAACTTCGTCG+CGG - chr8_1:62261130-62261149 None:intergenic 40.0%
!! AAAATGGTGGATCATGAGGA+TGG + chr8_1:62261191-62261210 Msa1205790:CDS 40.0%
ATATCTTCTCGGGTGCAAAT+GGG - chr8_1:62261217-62261236 None:intergenic 40.0%
AATATCTTCTCGGGTGCAAA+TGG - chr8_1:62261218-62261237 None:intergenic 40.0%
ATTTGCACCCGAGAAGATAT+TGG + chr8_1:62261217-62261236 Msa1205790:CDS 40.0%
CTCCAAAACCATACCAAACT+TGG - chr8_1:62261690-62261709 None:intergenic 40.0%
!!! AGTTTGGTATGGTTTTGGAG+AGG + chr8_1:62261690-62261709 Msa1205790:three_prime_UTR 40.0%
! GCTAGCTTATGACTCTCTGT+CGG + chr8_1:62256694-62256713 Msa1205790:five_prime_UTR 45.0%
CAGTTGGAGTGCATCATTCT+AGG - chr8_1:62256761-62256780 None:intergenic 45.0%
ATGAGATGAGATGAGATGGG+AGG - chr8_1:62256806-62256825 None:intergenic 45.0%
GTGATCTACTATACCAGACC+TGG + chr8_1:62256955-62256974 Msa1205790:five_prime_UTR 45.0%
! CTCTAGGGAATGTCATTGCT+CGG - chr8_1:62258390-62258409 None:intergenic 45.0%
! CGCAATTTTTCCTCTTGAGG+TGG - chr8_1:62258442-62258461 None:intergenic 45.0%
AAAAGGAGTCGTGTACCCTT+CGG - chr8_1:62258482-62258501 None:intergenic 45.0%
! TAATCACGGCTTTTAGGCCA+TGG - chr8_1:62258505-62258524 None:intergenic 45.0%
TCCTTACAAGCATCTGACAG+TGG + chr8_1:62258543-62258562 Msa1205790:CDS 45.0%
TCCACTGTCAGATGCTTGTA+AGG - chr8_1:62258547-62258566 None:intergenic 45.0%
GTGTTCAAATTTCCAGGTGG+AGG + chr8_1:62258604-62258623 Msa1205790:CDS 45.0%
TGGTACTGTCAGAACAGCAT+TGG + chr8_1:62258693-62258712 Msa1205790:CDS 45.0%
GGTTAATTGTGCTCAGTGGA+TGG - chr8_1:62258903-62258922 None:intergenic 45.0%
TTTAATGCTTACTGGCCCAC+TGG + chr8_1:62259046-62259065 Msa1205790:intron 45.0%
TGATTATGCAGGTTGCGAGT+TGG + chr8_1:62259138-62259157 Msa1205790:intron 45.0%
GATTATGCAGGTTGCGAGTT+GGG + chr8_1:62259139-62259158 Msa1205790:intron 45.0%
ATTATGCAGGTTGCGAGTTG+GGG + chr8_1:62259140-62259159 Msa1205790:intron 45.0%
! AGCTATGTCATTTGCTCCGA+AGG + chr8_1:62259190-62259209 Msa1205790:CDS 45.0%
GTTCAGTTTGCATTGGAACG+AGG + chr8_1:62259230-62259249 Msa1205790:CDS 45.0%
TCAGTTTGCATTGGAACGAG+GGG + chr8_1:62259232-62259251 Msa1205790:CDS 45.0%
GACATATCAAAGGCTCGTGA+TGG - chr8_1:62259302-62259321 None:intergenic 45.0%
! CACTAACCATTTTCAGCCCA+TGG - chr8_1:62259347-62259366 None:intergenic 45.0%
! TGCAGAGGGCATGTATCTAA+TGG + chr8_1:62259531-62259550 Msa1205790:intron 45.0%
!!! GTTGATCGAGTTTTAAGGCC+TGG + chr8_1:62259556-62259575 Msa1205790:CDS 45.0%
GGCAGAGCAGAAAAAAATCG+AGG + chr8_1:62259660-62259679 Msa1205790:CDS 45.0%
ATCTAGCCGAAAGTCTTTGC+TGG + chr8_1:62259683-62259702 Msa1205790:CDS 45.0%
TCTAGCCGAAAGTCTTTGCT+GGG + chr8_1:62259684-62259703 Msa1205790:CDS 45.0%
AAAAGGGCGATATCGCTATC+TGG + chr8_1:62259719-62259738 Msa1205790:CDS 45.0%
! TTCACTTTGGCTGGTTACCT+CGG - chr8_1:62260017-62260036 None:intergenic 45.0%
TGATCGGCACCACTAGATAT+CGG + chr8_1:62260194-62260213 Msa1205790:CDS 45.0%
!! GTATAGGAAGCTGACTTGCA+AGG - chr8_1:62260419-62260438 None:intergenic 45.0%
TCATTGGATCACCCACCATT+AGG + chr8_1:62260891-62260910 Msa1205790:intron 45.0%
ATAGCAGGAGACCTAATGGT+GGG - chr8_1:62260905-62260924 None:intergenic 45.0%
ACCATTAGGTCTCCTGCTAT+CGG + chr8_1:62260905-62260924 Msa1205790:intron 45.0%
!!! ATGGTTTTGGAGAGGATGAG+AGG + chr8_1:62261698-62261717 Msa1205790:three_prime_UTR 45.0%
!!! AAATAGTAATATTTTATTTT+TGG - chr8_1:62260688-62260707 None:intergenic 5.0%
AGCTTATGACTCTCTGTCGG+TGG + chr8_1:62256697-62256716 Msa1205790:five_prime_UTR 50.0%
GATGAGATGAGATGGGAGGA+GGG - chr8_1:62256802-62256821 None:intergenic 50.0%
AGATGAGATGAGATGGGAGG+AGG - chr8_1:62256803-62256822 None:intergenic 50.0%
GAGAATAGAGATCCCAGGTC+TGG - chr8_1:62256971-62256990 None:intergenic 50.0%
TTGGGAACATGGCAAAGCAG+TGG + chr8_1:62258169-62258188 Msa1205790:CDS 50.0%
ACATGGCAAAGCAGTGGTTC+CGG + chr8_1:62258175-62258194 Msa1205790:CDS 50.0%
CAAAGCAGTGGTTCCGGAAA+GGG + chr8_1:62258181-62258200 Msa1205790:CDS 50.0%
TCATTGCTCGGTCTTGCTCT+TGG - chr8_1:62258378-62258397 None:intergenic 50.0%
!! AAGGCATTGTCCACCTCAAG+AGG + chr8_1:62258429-62258448 Msa1205790:CDS 50.0%
AAAGGAGTCGTGTACCCTTC+GGG - chr8_1:62258481-62258500 None:intergenic 50.0%
! GGTACACGACTCCTTTTCCA+TGG + chr8_1:62258485-62258504 Msa1205790:CDS 50.0%
! CGGCTTTTAGGCCATGGAAA+AGG - chr8_1:62258499-62258518 None:intergenic 50.0%
CAAGCATCTGACAGTGGAGA+AGG + chr8_1:62258549-62258568 Msa1205790:CDS 50.0%
!! TATACGCATCGGCTCCTTGA+GGG - chr8_1:62258639-62258658 None:intergenic 50.0%
!! ATATACGCATCGGCTCCTTG+AGG - chr8_1:62258640-62258659 None:intergenic 50.0%
! GTCAGAACAGCATTGGACAC+TGG + chr8_1:62258700-62258719 Msa1205790:CDS 50.0%
! ACAGCATTGGACACTGGTTG+CGG + chr8_1:62258706-62258725 Msa1205790:CDS 50.0%
!! CGAGGGGTACCTGCTATTAT+TGG + chr8_1:62259248-62259267 Msa1205790:CDS 50.0%
! CTCGTGATGGGAATGGAAGA+CGG - chr8_1:62259289-62259308 None:intergenic 50.0%
! TCAAAGGCTCGTGATGGGAA+TGG - chr8_1:62259296-62259315 None:intergenic 50.0%
!!! GATCGAGTTTTAAGGCCTGG+TGG + chr8_1:62259559-62259578 Msa1205790:CDS 50.0%
CCTTCGTTCGCTTCCATGTT+TGG - chr8_1:62259630-62259649 None:intergenic 50.0%
CCAAACATGGAAGCGAACGA+AGG + chr8_1:62259627-62259646 Msa1205790:CDS 50.0%
AACATGGAAGCGAACGAAGG+AGG + chr8_1:62259630-62259649 Msa1205790:CDS 50.0%
! TCACTTTGGCTGGTTACCTC+GGG - chr8_1:62260016-62260035 None:intergenic 50.0%
ACCAGCCAAAGTGAAGTTGC+CGG + chr8_1:62260022-62260041 Msa1205790:CDS 50.0%
ATGGACATGAATGCAGGCCT+TGG + chr8_1:62260223-62260242 Msa1205790:CDS 50.0%
GATAGCAGGAGACCTAATGG+TGG - chr8_1:62260906-62260925 None:intergenic 50.0%
TCCGATAGCAGGAGACCTAA+TGG - chr8_1:62260909-62260928 None:intergenic 50.0%
GACCGCATATTAAGGCCAGA+AGG + chr8_1:62261092-62261111 Msa1205790:CDS 50.0%
CGGATTATGACCGATCCTTC+TGG - chr8_1:62261110-62261129 None:intergenic 50.0%
GCAAAGCAGTGGTTCCGGAA+AGG + chr8_1:62258180-62258199 Msa1205790:CDS 55.0%
TGCAAGGCTGTCTCCCTTTC+CGG - chr8_1:62258197-62258216 None:intergenic 55.0%
GGGAGACAGCCTTGCATTGA+AGG + chr8_1:62258201-62258220 Msa1205790:CDS 55.0%
GGAGGAACCATGTTCCCTCA+AGG + chr8_1:62258622-62258641 Msa1205790:CDS 55.0%
! ATCGGCTCCTTGAGGGAACA+TGG - chr8_1:62258632-62258651 None:intergenic 55.0%
! CAGCATTGGACACTGGTTGC+GGG + chr8_1:62258707-62258726 Msa1205790:CDS 55.0%
! AGCATTGGACACTGGTTGCG+GGG + chr8_1:62258708-62258727 Msa1205790:CDS 55.0%
AGGAAGTAAACCGGGCCAGT+GGG - chr8_1:62259064-62259083 None:intergenic 55.0%
AAGGAAGTAAACCGGGCCAG+TGG - chr8_1:62259065-62259084 None:intergenic 55.0%
GCGAACGAAGGAGGATCTGA+AGG + chr8_1:62259639-62259658 Msa1205790:CDS 55.0%
AGGGCGATATCGCTATCTGG+AGG + chr8_1:62259722-62259741 Msa1205790:CDS 55.0%
! CACTTTGGCTGGTTACCTCG+GGG - chr8_1:62260015-62260034 None:intergenic 55.0%
TCCGGCAACTTCACTTTGGC+TGG - chr8_1:62260026-62260045 None:intergenic 55.0%
AGCCAAAGTGAAGTTGCCGG+AGG + chr8_1:62260025-62260044 Msa1205790:CDS 55.0%
CTCCTCCGGCAACTTCACTT+TGG - chr8_1:62260030-62260049 None:intergenic 55.0%
GACATGAATGCAGGCCTTGG+AGG + chr8_1:62260226-62260245 Msa1205790:CDS 55.0%
GTGCAGCTGCAAATCCTCCA+AGG - chr8_1:62260243-62260262 None:intergenic 55.0%
TCTCCTGCTATCGGACCAGT+TGG + chr8_1:62260914-62260933 Msa1205790:intron 55.0%
TCGTGCTCTGTTGCCCGGTA+AGG - chr8_1:62258098-62258117 None:intergenic 60.0%
TACCGGGCAACAGAGCACGA+AGG + chr8_1:62258098-62258117 Msa1205790:CDS 60.0%
GCTCGGTCTTGCTCTTGGCA+AGG - chr8_1:62258373-62258392 None:intergenic 60.0%
TGCCTCATTCCTGCTCCCGA+AGG + chr8_1:62258463-62258482 Msa1205790:CDS 60.0%
GCCTCATTCCTGCTCCCGAA+GGG + chr8_1:62258464-62258483 Msa1205790:CDS 60.0%
ACCCTTCGGGAGCAGGAATG+AGG - chr8_1:62258468-62258487 None:intergenic 60.0%
GGGAACATGGTTCCTCCACC+TGG - chr8_1:62258619-62258638 None:intergenic 60.0%
CTGCAAAACCCCTATCCCCG+AGG + chr8_1:62259997-62260016 Msa1205790:CDS 60.0%
GCTGGTTACCTCGGGGATAG+GGG - chr8_1:62260008-62260027 None:intergenic 60.0%
! GGCTGGTTACCTCGGGGATA+GGG - chr8_1:62260009-62260028 None:intergenic 60.0%
! TGGCTGGTTACCTCGGGGAT+AGG - chr8_1:62260010-62260029 None:intergenic 60.0%
GGGACTGCAAACAGCCTAGC+AGG - chr8_1:62260067-62260086 None:intergenic 60.0%
GAGCCAACTGGTCCGATAGC+AGG - chr8_1:62260920-62260939 None:intergenic 60.0%
! GCTATCGGACCAGTTGGCTC+AGG + chr8_1:62260920-62260939 Msa1205790:intron 60.0%
GACTGGAAGCCTGAGCCAAC+TGG - chr8_1:62260932-62260951 None:intergenic 60.0%
GGCCTTCGTGCTCTGTTGCC+CGG - chr8_1:62258103-62258122 None:intergenic 65.0%
GTCGTGTACCCTTCGGGAGC+AGG - chr8_1:62258475-62258494 None:intergenic 65.0%
TGCTTACTGGCCCACTGGCC+CGG + chr8_1:62259051-62259070 Msa1205790:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 62256688 62261796 62256688 ID=Msa1205790;Name=Msa1205790
chr8_1 mRNA 62256688 62261796 62256688 ID=Msa1205790-mRNA-1;Parent=Msa1205790;Name=Msa1205790-mRNA-1;_AED=0.06;_eAED=0.06;_QI=318|1|1|1|0.71|0.62|8|504|613
chr8_1 exon 62256688 62256815 62256688 ID=Msa1205790-mRNA-1:exon:20173;Parent=Msa1205790-mRNA-1
chr8_1 exon 62256854 62257000 62256854 ID=Msa1205790-mRNA-1:exon:20174;Parent=Msa1205790-mRNA-1
chr8_1 exon 62258036 62258729 62258036 ID=Msa1205790-mRNA-1:exon:20175;Parent=Msa1205790-mRNA-1
chr8_1 exon 62259149 62259359 62259149 ID=Msa1205790-mRNA-1:exon:20176;Parent=Msa1205790-mRNA-1
chr8_1 exon 62259536 62259818 62259536 ID=Msa1205790-mRNA-1:exon:20177;Parent=Msa1205790-mRNA-1
chr8_1 exon 62259979 62260365 62259979 ID=Msa1205790-mRNA-1:exon:20178;Parent=Msa1205790-mRNA-1
chr8_1 exon 62260521 62260598 62260521 ID=Msa1205790-mRNA-1:exon:20179;Parent=Msa1205790-mRNA-1
chr8_1 exon 62261061 62261796 62261061 ID=Msa1205790-mRNA-1:exon:20180;Parent=Msa1205790-mRNA-1
chr8_1 five_prime_UTR 62256688 62256815 62256688 ID=Msa1205790-mRNA-1:five_prime_utr;Parent=Msa1205790-mRNA-1
chr8_1 five_prime_UTR 62256854 62257000 62256854 ID=Msa1205790-mRNA-1:five_prime_utr;Parent=Msa1205790-mRNA-1
chr8_1 five_prime_UTR 62258036 62258078 62258036 ID=Msa1205790-mRNA-1:five_prime_utr;Parent=Msa1205790-mRNA-1
chr8_1 CDS 62258079 62258729 62258079 ID=Msa1205790-mRNA-1:cds;Parent=Msa1205790-mRNA-1
chr8_1 CDS 62259149 62259359 62259149 ID=Msa1205790-mRNA-1:cds;Parent=Msa1205790-mRNA-1
chr8_1 CDS 62259536 62259818 62259536 ID=Msa1205790-mRNA-1:cds;Parent=Msa1205790-mRNA-1
chr8_1 CDS 62259979 62260365 62259979 ID=Msa1205790-mRNA-1:cds;Parent=Msa1205790-mRNA-1
chr8_1 CDS 62260521 62260598 62260521 ID=Msa1205790-mRNA-1:cds;Parent=Msa1205790-mRNA-1
chr8_1 CDS 62261061 62261292 62261061 ID=Msa1205790-mRNA-1:cds;Parent=Msa1205790-mRNA-1
chr8_1 three_prime_UTR 62261293 62261796 62261293 ID=Msa1205790-mRNA-1:three_prime_utr;Parent=Msa1205790-mRNA-1
Gene Sequence

>Msa1205790

ATGGGTTCTAAAAATGCCTTACCGGGCAACAGAGCACGAAGGCCTTTGTCAATTTTCGCTGTGCTTGCTCTGTGTTGTTTGTTTTATCTTTTGGGAACATGGCAAAGCAGTGGTTCCGGAAAGGGAGACAGCCTTGCATTGAAGGTAAATAAGATGCAGGCAACAACAGACTGCAACATTGTACCGAATTTGAATTTTGAACCCCAACACAAATATGTAGAAATTGTTGAGCAATCCGAACCGAAAGCTAAAATGTTCAAGGCATGTGATGTAAAATATACTGATTATACACCTTGCCAAGAGCAAGACCGAGCAATGACATTCCCTAGAGAAAACATGATCTATAGGGAAAGGCATTGTCCACCTCAAGAGGAAAAATTGCGTTGCCTCATTCCTGCTCCCGAAGGGTACACGACTCCTTTTCCATGGCCTAAAAGCCGTGATTATGCCTACTATGCTAATGTTCCTTACAAGCATCTGACAGTGGAGAAGGCTAATCAAAACTGGGTGAAATTTGAAGGGAATGTGTTCAAATTTCCAGGTGGAGGAACCATGTTCCCTCAAGGAGCCGATGCGTATATTGATGAGCTTGCATCGGTTATTCCAATCAAAGATGGTACTGTCAGAACAGCATTGGACACTGGTTGCGGGGTTGCGAGTTGGGGAGCGTACTTGCTAAAGAGAAATGTGCTAGCTATGTCATTTGCTCCGAAGGATAACCATGAAGCACAAGTTCAGTTTGCATTGGAACGAGGGGTACCTGCTATTATTGGTGTTCTTGGTTCGATCCGTCTTCCATTCCCATCACGAGCCTTTGATATGTCTCAGTGTTCTCGTTGTCTAATACCATGGGCTGAAAATGAGGGCATGTATCTAATGGAAGTTGATCGAGTTTTAAGGCCTGGTGGATTTTGGATTTTATCTGGCCCTCCAATTAATTGGAAAACGTACTACCAAACATGGAAGCGAACGAAGGAGGATCTGAAGGCAGAGCAGAAAAAAATCGAGGATCTAGCCGAAAGTCTTTGCTGGGAAAAGAAGTATGAAAAGGGCGATATCGCTATCTGGAGGAAGAAAATAAATGCTAAATCATGTCAAAGAAAATCTCCCAATTTATGTGATTTAGATAATGCTGATGATGTTTGGTACAAAAAAATGGAGGTCTGCAAAACCCCTATCCCCGAGGTAACCAGCCAAAGTGAAGTTGCCGGAGGAGAATTGAAGAAGTTTCCTGCTAGGCTGTTTGCAGTCCCTCCTAGAATAGCTAAAGACGTTATTCCAGGCGTAACAGTTGATTCTTATCAAGAGGACAACAAATTATGGAAAAAGCGTGTTAATAATTACAAAAGAATTAATAGATTGATCGGCACCACTAGATATCGGAATGTAATGGACATGAATGCAGGCCTTGGAGGATTTGCAGCTGCACTTGAATCACAAAAATCTTGGGTGATGAATGCTGTGCCCACAATTGCTGAGAACACTTTAGGTGTTATCTATGAAAGAGGTCTCATTGGTATTTATCATGACTGGTGTGAAGGCTTTTCTACATATCCAAGGACATATGATCTTATTCATGCCAATGGTTTATTTAGTTTGTACCAGGACAAGTGCAACCTAGAAGACATCCTTTTAGAGATGGACCGCATATTAAGGCCAGAAGGATCGGTCATAATCCGCGACGAAGTTGATGTGATTAACAAGGTTCAGAAAATTGTTAGGGGAATGAGATGGGAATCTAAAATGGTGGATCATGAGGATGGCCCATTTGCACCCGAGAAGATATTGGTTATTGTAAAAGAGTATTGGGTTGGCAGCAGTAAAAACAACACATCCAGTTAG
Protein sequence

>Msa1205790

MGSKNALPGNRARRPLSIFAVLALCCLFYLLGTWQSSGSGKGDSLALKVNKMQATTDCNIVPNLNFEPQHKYVEIVEQSEPKAKMFKACDVKYTDYTPCQEQDRAMTFPRENMIYRERHCPPQEEKLRCLIPAPEGYTTPFPWPKSRDYAYYANVPYKHLTVEKANQNWVKFEGNVFKFPGGGTMFPQGADAYIDELASVIPIKDGTVRTALDTGCGVASWGAYLLKRNVLAMSFAPKDNHEAQVQFALERGVPAIIGVLGSIRLPFPSRAFDMSQCSRCLIPWAENEGMYLMEVDRVLRPGGFWILSGPPINWKTYYQTWKRTKEDLKAEQKKIEDLAESLCWEKKYEKGDIAIWRKKINAKSCQRKSPNLCDLDNADDVWYKKMEVCKTPIPEVTSQSEVAGGELKKFPARLFAVPPRIAKDVIPGVTVDSYQEDNKLWKKRVNNYKRINRLIGTTRYRNVMDMNAGLGGFAAALESQKSWVMNAVPTIAENTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHANGLFSLYQDKCNLEDILLEMDRILRPEGSVIIRDEVDVINKVQKIVRGMRWESKMVDHEDGPFAPEKILVIVKEYWVGSSKNNTSS*