Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130890 | ABD32707.1 | 98.663 | 748 | 7 | 2 | 1 | 746 | 1 | 747 | 0.0 | 1504 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130890 | sp|Q8L838|COG4_ARATH | 77.883 | 737 | 157 | 2 | 10 | 746 | 8 | 738 | 0.0 | 1194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130890 | Q2HTC4 | 98.663 | 748 | 7 | 2 | 1 | 746 | 1 | 747 | 0.0 | 1504 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012940 | Msa1130890 | 0.803629 | 3.181766e-49 | -8.615850e-47 |
| Msa0027820 | Msa1130890 | 0.831907 | 1.279399e-55 | -8.615850e-47 |
| Msa0035120 | Msa1130890 | 0.803783 | 2.956128e-49 | -8.615850e-47 |
| Msa0061340 | Msa1130890 | 0.820874 | 5.446989e-53 | -8.615850e-47 |
| Msa0093850 | Msa1130890 | 0.839732 | 1.329148e-57 | -8.615850e-47 |
| Msa0106320 | Msa1130890 | 0.808448 | 3.081993e-50 | -8.615850e-47 |
| Msa0610320 | Msa1130890 | 0.801545 | 8.560976e-49 | -8.615850e-47 |
| Msa0614000 | Msa1130890 | 0.805231 | 1.475262e-49 | -8.615850e-47 |
| Msa0626270 | Msa1130890 | 0.802376 | 5.777288e-49 | -8.615850e-47 |
| Msa0626450 | Msa1130890 | 0.852722 | 3.831796e-61 | -8.615850e-47 |
| Msa0626460 | Msa1130890 | 0.812706 | 3.704065e-51 | -8.615850e-47 |
| Msa0626490 | Msa1130890 | 0.850213 | 1.963940e-60 | -8.615850e-47 |
| Msa0638480 | Msa1130890 | 0.801922 | 7.164028e-49 | -8.615850e-47 |
| Msa0651550 | Msa1130890 | 0.818315 | 2.089628e-52 | -8.615850e-47 |
| Msa0652770 | Msa1130890 | 0.825861 | 3.720551e-54 | -8.615850e-47 |
| Msa0660370 | Msa1130890 | 0.827709 | 1.346969e-54 | -8.615850e-47 |
| Msa0664540 | Msa1130890 | 0.804012 | 2.649391e-49 | -8.615850e-47 |
| Msa0664600 | Msa1130890 | 0.856571 | 2.941342e-62 | -8.615850e-47 |
| Msa0689860 | Msa1130890 | 0.814804 | 1.278137e-51 | -8.615850e-47 |
| Msa0693330 | Msa1130890 | 0.816297 | 5.945925e-52 | -8.615850e-47 |
| Msa0695270 | Msa1130890 | 0.821477 | 3.955297e-53 | -8.615850e-47 |
| Msa0698640 | Msa1130890 | 0.801507 | 8.715258e-49 | -8.615850e-47 |
| Msa0706760 | Msa1130890 | 0.826553 | 2.547120e-54 | -8.615850e-47 |
| Msa0729100 | Msa1130890 | 0.810205 | 1.294139e-50 | -8.615850e-47 |
| Msa0760560 | Msa1130890 | 0.808625 | 2.824501e-50 | -8.615850e-47 |
| Msa0765270 | Msa1130890 | 0.800570 | 1.354628e-48 | -8.615850e-47 |
| Msa0766930 | Msa1130890 | 0.825001 | 5.946353e-54 | -8.615850e-47 |
| Msa0788770 | Msa1130890 | 0.827573 | 1.452172e-54 | -8.615850e-47 |
| Msa0789100 | Msa1130890 | 0.804322 | 2.284018e-49 | -8.615850e-47 |
| Msa0807280 | Msa1130890 | 0.832710 | 8.091541e-56 | -8.615850e-47 |
| Msa0807820 | Msa1130890 | 0.838564 | 2.667949e-57 | -8.615850e-47 |
| Msa0832120 | Msa1130890 | 0.806832 | 6.792381e-50 | -8.615850e-47 |
| Msa0136650 | Msa1130890 | 0.826538 | 2.568580e-54 | -8.615850e-47 |
| Msa0138360 | Msa1130890 | 0.832085 | 1.155641e-55 | -8.615850e-47 |
| Msa0144360 | Msa1130890 | 0.821123 | 4.772469e-53 | -8.615850e-47 |
| Msa0147980 | Msa1130890 | 0.809691 | 1.669609e-50 | -8.615850e-47 |
| Msa0152400 | Msa1130890 | 0.819492 | 1.128861e-52 | -8.615850e-47 |
| Msa0174450 | Msa1130890 | 0.832099 | 1.146563e-55 | -8.615850e-47 |
| Msa0221000 | Msa1130890 | 0.815207 | 1.040520e-51 | -8.615850e-47 |
| Msa0225480 | Msa1130890 | 0.833842 | 4.226476e-56 | -8.615850e-47 |
| Msa0231630 | Msa1130890 | 0.815045 | 1.130379e-51 | -8.615850e-47 |
| Msa0380620 | Msa1130890 | 0.804180 | 2.445118e-49 | -8.615850e-47 |
| Msa0430260 | Msa1130890 | 0.820474 | 6.728068e-53 | -8.615850e-47 |
| Msa0468250 | Msa1130890 | 0.821147 | 4.712258e-53 | -8.615850e-47 |
| Msa0479200 | Msa1130890 | 0.810893 | 9.192435e-51 | -8.615850e-47 |
| Msa0982650 | Msa1130890 | 0.817545 | 3.119551e-52 | -8.615850e-47 |
| Msa1028280 | Msa1130890 | 0.807356 | 5.261134e-50 | -8.615850e-47 |
| Msa1050910 | Msa1130890 | 0.815808 | 7.645919e-52 | -8.615850e-47 |
| Msa1050960 | Msa1130890 | 0.817333 | 3.481334e-52 | -8.615850e-47 |
| Msa1076560 | Msa1130890 | 0.823371 | 1.435770e-53 | -8.615850e-47 |
| Msa0279850 | Msa1130890 | 0.809610 | 1.737547e-50 | -8.615850e-47 |
| Msa0300270 | Msa1130890 | 0.809203 | 2.125081e-50 | -8.615850e-47 |
| Msa0300320 | Msa1130890 | 0.811463 | 6.912210e-51 | -8.615850e-47 |
| Msa0341690 | Msa1130890 | 0.820646 | 6.145574e-53 | -8.615850e-47 |
| Msa0358400 | Msa1130890 | 0.818236 | 2.177381e-52 | -8.615850e-47 |
| Msa1113340 | Msa1130890 | 0.846633 | 1.920945e-59 | -8.615850e-47 |
| Msa1124240 | Msa1130890 | 0.806472 | 8.091739e-50 | -8.615850e-47 |
| Msa1130890 | Msa1130950 | 0.965367 | 1.632795e-124 | -8.615850e-47 |
| Msa1130890 | Msa1162770 | 0.807944 | 3.946088e-50 | -8.615850e-47 |
| Msa1130890 | Msa1174530 | 0.802037 | 6.783295e-49 | -8.615850e-47 |
| Msa1130890 | Msa1205790 | 0.850559 | 1.570091e-60 | -8.615850e-47 |
| Msa1130890 | Msa1205830 | 0.849758 | 2.632435e-60 | -8.615850e-47 |
| Msa1130890 | Msa1206230 | 0.807626 | 4.610040e-50 | -8.615850e-47 |
| Msa1130890 | Msa1213800 | 0.840051 | 1.097050e-57 | -8.615850e-47 |
| Msa1130890 | Msa1248290 | 0.804460 | 2.136966e-49 | -8.615850e-47 |
| Msa1130890 | Msa1276660 | 0.807622 | 4.620561e-50 | -8.615850e-47 |
| Msa1130890 | Msa1306640 | 0.800002 | 1.767794e-48 | -8.615850e-47 |
| Msa1130890 | Msa1348090 | 0.805474 | 1.311654e-49 | -8.615850e-47 |
| Msa1130890 | Msa1369150 | 0.808677 | 2.753523e-50 | -8.615850e-47 |
| Msa1130890 | Msa1371520 | 0.839902 | 1.200322e-57 | -8.615850e-47 |
| Msa1130890 | Msa1375280 | 0.823869 | 1.098113e-53 | -8.615850e-47 |
| Msa1130890 | Msa1403710 | 0.812551 | 4.004650e-51 | -8.615850e-47 |
| Msa1130890 | Msa1412000 | 0.833525 | 5.073053e-56 | -8.615850e-47 |
| Msa1130890 | Msa1418240 | 0.816769 | 4.661442e-52 | -8.615850e-47 |
| Msa1130890 | Msa1427110 | 0.811852 | 5.689500e-51 | -8.615850e-47 |
| Msa1130890 | Msa1432500 | 0.811915 | 5.512652e-51 | -8.615850e-47 |
| Msa1130890 | Msa1434740 | 0.809761 | 1.612513e-50 | -8.615850e-47 |
| Msa1130890 | Msa1439610 | 0.803629 | 3.182339e-49 | -8.615850e-47 |
| Msa1130890 | Msa1440960 | 0.848387 | 6.333226e-60 | -8.615850e-47 |
| Msa1130890 | Msa1459460 | 0.857054 | 2.119136e-62 | -8.615850e-47 |
| Msa0500380 | Msa1130890 | 0.812765 | 3.595191e-51 | -8.615850e-47 |
| Msa0518030 | Msa1130890 | 0.813054 | 3.108330e-51 | -8.615850e-47 |
| Msa0519760 | Msa1130890 | 0.806346 | 8.601936e-50 | -8.615850e-47 |
| Msa0519840 | Msa1130890 | 0.802755 | 4.825620e-49 | -8.615850e-47 |
| Msa0527190 | Msa1130890 | 0.845677 | 3.497308e-59 | -8.615850e-47 |
| Msa0549360 | Msa1130890 | 0.807874 | 4.084863e-50 | -8.615850e-47 |
| Msa0556010 | Msa1130890 | 0.800277 | 1.554515e-48 | -8.615850e-47 |
| Msa0856050 | Msa1130890 | 0.809414 | 1.915128e-50 | -8.615850e-47 |
| Msa0861510 | Msa1130890 | 0.826039 | 3.376163e-54 | -8.615850e-47 |
| Msa0861530 | Msa1130890 | 0.822293 | 2.559208e-53 | -8.615850e-47 |
| Msa0861600 | Msa1130890 | 0.816225 | 6.170974e-52 | -8.615850e-47 |
| Msa0866290 | Msa1130890 | 0.813878 | 2.047725e-51 | -8.615850e-47 |
| Msa0880270 | Msa1130890 | 0.801123 | 1.044540e-48 | -8.615850e-47 |
| Msa0945190 | Msa1130890 | 0.834112 | 3.618364e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130890 | MtrunA17_Chr7g0276321 | 98.663 | 748 | 7 | 2 | 1 | 746 | 1 | 747 | 0.0 | 1504 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130890 | AT4G01395.1 | 77.883 | 737 | 157 | 2 | 10 | 746 | 8 | 738 | 0.0 | 1194 |
Find 192 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTCTAACTTCTTTGTTTA+AGG | 0.032319 | 7_3:+83156918 | Msa1130890:CDS |
| TCAGATTGATGCGCAGTTTA+AGG | 0.126052 | 7_3:+83156606 | Msa1130890:CDS |
| AATGGCAACAATTCTAAATT+TGG | 0.132609 | 7_3:+83158759 | Msa1130890:CDS |
| TCTCCGAGATTCTAGATTTC+TGG | 0.171090 | 7_3:+83158788 | Msa1130890:CDS |
| TTGTAAAGATCAATTGTTTC+TGG | 0.216406 | 7_3:+83155961 | Msa1130890:five_prime_UTR |
| ATCTGGTACATTGCGCAAAA+TGG | 0.251301 | 7_3:+83156105 | Msa1130890:exon |
| ATAGAAGTGGTGAGGCTATC+AGG | 0.255275 | 7_3:-83157420 | None:intergenic |
| AATAATCGGAATCTGATAAT+TGG | 0.258847 | 7_3:+83156048 | Msa1130890:five_prime_UTR |
| CTTGGTGCAAAGTTGTTCTT+TGG | 0.267233 | 7_3:+83157597 | Msa1130890:CDS |
| TTCAAGCAAGCTTTAAATTC+TGG | 0.286449 | 7_3:+83158364 | Msa1130890:CDS |
| TTCAGAGCAGCTATTGCTTC+TGG | 0.303243 | 7_3:-83158892 | None:intergenic |
| GATGCGCAGTTTAAGGATTC+TGG | 0.303372 | 7_3:+83156613 | Msa1130890:CDS |
| AACAATTAGCTATGAGCTTT+CGG | 0.338036 | 7_3:+83158447 | Msa1130890:CDS |
| GTGATCATCCTGCTATTCTT+AGG | 0.341489 | 7_3:+83156734 | Msa1130890:CDS |
| AGCTGAGGTTAGGCGTGTAT+TGG | 0.343394 | 7_3:+83158849 | Msa1130890:CDS |
| CGCGACAACAGAACTGATAT+TGG | 0.345812 | 7_3:-83157499 | None:intergenic |
| TCTTGAAGAGGAGGGTTTGC+AGG | 0.347141 | 7_3:+83156783 | Msa1130890:CDS |
| GATTTCTGGGGTGAGAACTC+TGG | 0.348048 | 7_3:+83158802 | Msa1130890:CDS |
| GGTAAATCTGATTACACTAA+TGG | 0.350895 | 7_3:-83159071 | None:intergenic |
| AACAAGTGGTCCATCGATTT+CGG | 0.356403 | 7_3:+83156172 | Msa1130890:CDS |
| CTCCGAGATTCTAGATTTCT+GGG | 0.358411 | 7_3:+83158789 | Msa1130890:CDS |
| TGATAGCCTCACCACTTCTA+TGG | 0.376092 | 7_3:+83157422 | Msa1130890:CDS |
| TCTTCATCAGCGGATCCGTT+GGG | 0.377021 | 7_3:-83156148 | None:intergenic |
| ATTGACACTCCTTTGTTCAT+TGG | 0.377060 | 7_3:-83156887 | None:intergenic |
| GTATGCAATCTGTGAGCTTC+AGG | 0.377484 | 7_3:+83157008 | Msa1130890:CDS |
| CAGTTATCATCTGAGATAAA+TGG | 0.377500 | 7_3:+83157093 | Msa1130890:CDS |
| GTAGCACGAGGGAGCAATTC+GGG | 0.381364 | 7_3:-83157273 | None:intergenic |
| AAATCTTGTTTGTCTGAGTT+AGG | 0.382284 | 7_3:+83158325 | Msa1130890:CDS |
| GCTACCACTTCTGAAAGATT+TGG | 0.383308 | 7_3:-83157295 | None:intergenic |
| AACAACTTTGCACCAAGGTT+TGG | 0.388605 | 7_3:-83157591 | None:intergenic |
| CAAGTACAACTCAACCTCTC+TGG | 0.392024 | 7_3:-83157166 | None:intergenic |
| TAGGATGGAATTTGAGCAAT+TGG | 0.395500 | 7_3:+83156846 | Msa1130890:CDS |
| GTTTCTGGTGATAAGTAGTT+GGG | 0.397961 | 7_3:+83155976 | Msa1130890:five_prime_UTR |
| GATTCAGAGGGAACGTTTGT+TGG | 0.402328 | 7_3:+83156651 | Msa1130890:CDS |
| CAGAGAGGTTGAGTTGTACT+TGG | 0.402847 | 7_3:+83157167 | Msa1130890:CDS |
| AGGGTTTGCAGGTGTATGTT+GGG | 0.403777 | 7_3:+83156794 | Msa1130890:CDS |
| AAGTTGTAATATCATCTATA+TGG | 0.406028 | 7_3:+83158913 | Msa1130890:exon |
| GACATTGGAAAGCATGTAAT+CGG | 0.409260 | 7_3:-83156392 | None:intergenic |
| GATACTGAAGATTATGAATC+TGG | 0.410955 | 7_3:+83156559 | Msa1130890:CDS |
| CTCTTCATCAGCGGATCCGT+TGG | 0.413158 | 7_3:-83156149 | None:intergenic |
| ACAGCAGCAACAACAATAAT+CGG | 0.415753 | 7_3:+83156034 | Msa1130890:five_prime_UTR |
| TGTTTCTGGTGATAAGTAGT+TGG | 0.417519 | 7_3:+83155975 | Msa1130890:five_prime_UTR |
| AATACAAAACCTTGTTCATC+TGG | 0.417692 | 7_3:+83156088 | Msa1130890:five_prime_UTR |
| GCTGAGGTTAGGCGTGTATT+GGG | 0.418589 | 7_3:+83158850 | Msa1130890:CDS |
| AGAAGTGAGAGCTTTGATCT+TGG | 0.422200 | 7_3:-83157244 | None:intergenic |
| GAGGGTTTGCAGGTGTATGT+TGG | 0.428024 | 7_3:+83156793 | Msa1130890:CDS |
| AATCCTCACCTAGCTGCATA+AGG | 0.428172 | 7_3:-83157203 | None:intergenic |
| AATCTCACTGTTCTCTTCAA+TGG | 0.429237 | 7_3:-83156953 | None:intergenic |
| AGTGGTTTATGTGGGGAGGA+TGG | 0.434727 | 7_3:+83156979 | Msa1130890:CDS |
| TGCCGATCAAGTCAGTCTTA+AGG | 0.435864 | 7_3:+83156432 | Msa1130890:CDS |
| AACAATTCTAAATTTGGAAA+AGG | 0.436259 | 7_3:+83158765 | Msa1130890:CDS |
| AAGTCATTGGAATGAGATCT+AGG | 0.437908 | 7_3:+83156827 | Msa1130890:CDS |
| GGCGTTGGTGTGCAAAAGAC+AGG | 0.439648 | 7_3:+83157621 | Msa1130890:CDS |
| GGTGCAAAGTTGTTCTTTGG+AGG | 0.444679 | 7_3:+83157600 | Msa1130890:CDS |
| TCTGGTACATTGCGCAAAAT+GGG | 0.451954 | 7_3:+83156106 | Msa1130890:exon |
| AACAGCTTGAAGGGATTGTC+AGG | 0.453139 | 7_3:+83156683 | Msa1130890:CDS |
| AACAACAATTTACTTGCTGT+TGG | 0.454177 | 7_3:+83157120 | Msa1130890:CDS |
| GGTAGCACGAGGGAGCAATT+CGG | 0.466729 | 7_3:-83157274 | None:intergenic |
| ATACATATTAAGATGAAAAC+CGG | 0.466754 | 7_3:-83158963 | None:intergenic |
| AACTCAACCTCTCTGGGATC+AGG | 0.467027 | 7_3:-83157159 | None:intergenic |
| AAAGTTGCGCAGGATTTGAC+CGG | 0.471346 | 7_3:+83157324 | Msa1130890:CDS |
| TGTTGTTGCTGCTGTTGTAC+GGG | 0.471876 | 7_3:-83156026 | None:intergenic |
| GTTTGCCCGTCTTACTCAAA+TGG | 0.473062 | 7_3:+83158741 | Msa1130890:CDS |
| GGAGTTAATCTCCAGGTCAT+AGG | 0.483096 | 7_3:-83158826 | None:intergenic |
| ATTTCTGGGGTGAGAACTCT+GGG | 0.484982 | 7_3:+83158803 | Msa1130890:CDS |
| TTGTTGTTGCTGCTGTTGTA+CGG | 0.486225 | 7_3:-83156027 | None:intergenic |
| TTATTGACTTCATTGTGAAA+AGG | 0.490908 | 7_3:+83158599 | Msa1130890:CDS |
| ACTCCTTTGTTCATTGGCCA+TGG | 0.491057 | 7_3:-83156881 | None:intergenic |
| ATCCTCACCTAGCTGCATAA+GGG | 0.491316 | 7_3:-83157202 | None:intergenic |
| ATGAGAAGTGGAAGTGACAT+TGG | 0.492363 | 7_3:-83156407 | None:intergenic |
| CAGAAAAGATTTAGTCAGCT+TGG | 0.495448 | 7_3:+83158640 | Msa1130890:CDS |
| CAGCAAGTAAATTGTTGTTA+CGG | 0.496490 | 7_3:-83157116 | None:intergenic |
| GCATGTAATCGGAATCAGAT+TGG | 0.497776 | 7_3:-83156381 | None:intergenic |
| CTCCCTTATGCAGCTAGGTG+AGG | 0.497809 | 7_3:+83157200 | Msa1130890:CDS |
| AACAATTTACTTGCTGTTGG+AGG | 0.498393 | 7_3:+83157123 | Msa1130890:CDS |
| TGTTGCCATTTGAGTAAGAC+GGG | 0.502910 | 7_3:-83158746 | None:intergenic |
| TTCAGGAGGAATGTGATTCA+AGG | 0.503679 | 7_3:+83157025 | Msa1130890:CDS |
| GTTCCTACACTGTCTAATAG+TGG | 0.504439 | 7_3:-83158427 | None:intergenic |
| GATTAACTCCAGCTGAGGTT+AGG | 0.505565 | 7_3:+83158839 | Msa1130890:CDS |
| GAGCGTGGTAATTGCCTTGA+CGG | 0.505948 | 7_3:+83156520 | Msa1130890:CDS |
| AATACACGCCTAACCTCAGC+TGG | 0.506744 | 7_3:-83158847 | None:intergenic |
| CGTATAAACTAGGACTAGCT+TGG | 0.507356 | 7_3:-83159096 | None:intergenic |
| TTTGTTTAAGGACATTGTGT+TGG | 0.508009 | 7_3:+83156930 | Msa1130890:CDS |
| CTTAAACAAAGAAGTTAGAC+AGG | 0.508452 | 7_3:-83156917 | None:intergenic |
| CCACATTTGTTTCCACAGCA+TGG | 0.508585 | 7_3:-83158522 | None:intergenic |
| AAAATGTTAGGAAGGCGATA+AGG | 0.508997 | 7_3:+83157382 | Msa1130890:CDS |
| CGAACAAACCTAAGAATAGC+AGG | 0.516770 | 7_3:-83156742 | None:intergenic |
| TGAACAAATACATGGAGTAC+AGG | 0.517432 | 7_3:+83157061 | Msa1130890:CDS |
| AACAGAACTGATATTGGAAG+TGG | 0.520673 | 7_3:-83157493 | None:intergenic |
| CATGGTTGAAAATGTTAGGA+AGG | 0.521011 | 7_3:+83157374 | Msa1130890:CDS |
| TCAGCGGATCCGTTGGGGTG+AGG | 0.525350 | 7_3:-83156142 | None:intergenic |
| TGGAGAAGTCTCTGAACCCA+TGG | 0.527077 | 7_3:-83158502 | None:intergenic |
| TTCCGCTTTGCCGAAATCGA+TGG | 0.528011 | 7_3:-83156182 | None:intergenic |
| TCCGCTTGGTCTTGAAGAGG+AGG | 0.530170 | 7_3:+83156774 | Msa1130890:CDS |
| AAAAGTATCGTAATTGTTAG+CGG | 0.530343 | 7_3:-83158566 | None:intergenic |
| AATGATTGCTTCACACAAGA+TGG | 0.530897 | 7_3:-83159123 | None:intergenic |
| TGCGCCAGCTGATCGAGAAA+AGG | 0.534910 | 7_3:+83158300 | Msa1130890:CDS |
| ACCCCAGAAATCTAGAATCT+CGG | 0.536349 | 7_3:-83158791 | None:intergenic |
| GAAGTGAAGAAACAGCTTGA+AGG | 0.536945 | 7_3:+83156673 | Msa1130890:CDS |
| AAGTGAAGAAACAGCTTGAA+GGG | 0.537472 | 7_3:+83156674 | Msa1130890:CDS |
| AAGTACAACTCAACCTCTCT+GGG | 0.540911 | 7_3:-83157165 | None:intergenic |
| CTCAGCTGGAGTTAATCTCC+AGG | 0.541238 | 7_3:-83158833 | None:intergenic |
| CCGCTTGGTCTTGAAGAGGA+GGG | 0.541995 | 7_3:+83156775 | Msa1130890:CDS |
| TCTTACAAAGTTGCTTGCGA+AGG | 0.544056 | 7_3:+83157463 | Msa1130890:CDS |
| CATTGGAATGAGATCTAGGA+TGG | 0.544178 | 7_3:+83156831 | Msa1130890:CDS |
| GCTGTTGGAGGAGTTTCTGA+AGG | 0.544578 | 7_3:+83157135 | Msa1130890:CDS |
| GTTCGTCTTTACACTCCGCT+TGG | 0.545995 | 7_3:+83156760 | Msa1130890:CDS |
| CTGATCAGATTCAGATTCAG+AGG | 0.547125 | 7_3:+83156638 | Msa1130890:CDS |
| TCAGGAGGAATGTGATTCAA+GGG | 0.547499 | 7_3:+83157026 | Msa1130890:CDS |
| GATGGAATTTGAGCAATTGG+TGG | 0.548724 | 7_3:+83156849 | Msa1130890:CDS |
| AATGCATTCGTGAAGAAGAC+GGG | 0.551963 | 7_3:-83156248 | None:intergenic |
| TGGCCGTATCCGTGGTGTAA+TGG | 0.552783 | 7_3:-83158407 | None:intergenic |
| CTCAAGAATGACATAAAACC+CGG | 0.557218 | 7_3:-83157343 | None:intergenic |
| CAATGCATTCGTGAAGAAGA+CGG | 0.557751 | 7_3:-83156249 | None:intergenic |
| CGCAATGTACCAGATGAACA+AGG | 0.558485 | 7_3:-83156097 | None:intergenic |
| GCTCAACAATGGCATCAATA+CGG | 0.560702 | 7_3:-83156501 | None:intergenic |
| CTGAAAGATTTGGTAGCACG+AGG | 0.561792 | 7_3:-83157285 | None:intergenic |
| TAGCTTCAGCAAAGTTGCGC+AGG | 0.562899 | 7_3:+83157314 | Msa1130890:CDS |
| TGCAGCGGCTTTAAATAACA+TGG | 0.565172 | 7_3:+83157653 | Msa1130890:CDS |
| ATACATGGAGTACAGGAAGT+TGG | 0.568292 | 7_3:+83157068 | Msa1130890:CDS |
| CTTACAAAGTTGCTTGCGAA+GGG | 0.568425 | 7_3:+83157464 | Msa1130890:CDS |
| CACTCCGCTTGGTCTTGAAG+AGG | 0.569596 | 7_3:+83156771 | Msa1130890:CDS |
| TAGAAGTGGTGAGGCTATCA+GGG | 0.571092 | 7_3:-83157419 | None:intergenic |
| AGATGGTCCACGTATAAACT+AGG | 0.571416 | 7_3:-83159106 | None:intergenic |
| AAGTTGTTCTTTGGAGGCGT+TGG | 0.572043 | 7_3:+83157606 | Msa1130890:CDS |
| AAGATTATGAATCTGGTGCT+AGG | 0.572937 | 7_3:+83156566 | Msa1130890:CDS |
| AAAAGATTTAGTCAGCTTGG+TGG | 0.574262 | 7_3:+83158643 | Msa1130890:CDS |
| CAGGAAGAAGCTTTCTTCCG+CGG | 0.576624 | 7_3:+83156702 | Msa1130890:CDS |
| GACGATTTCGAGAACATCGG+AGG | 0.578198 | 7_3:-83156359 | None:intergenic |
| TTTGAGTGGTTTATGTGGGG+AGG | 0.578237 | 7_3:+83156975 | Msa1130890:CDS |
| CTTCATCAGCGGATCCGTTG+GGG | 0.580518 | 7_3:-83156147 | None:intergenic |
| AAAATTAGAGAGCCAAACCT+TGG | 0.582691 | 7_3:+83157579 | Msa1130890:CDS |
| CCATGCTGTGGAAACAAATG+TGG | 0.584729 | 7_3:+83158522 | Msa1130890:CDS |
| GCTACCAAATCTTTCAGAAG+TGG | 0.585248 | 7_3:+83157291 | Msa1130890:CDS |
| CAATATCAGTTCTGTTGTCG+CGG | 0.586798 | 7_3:+83157500 | Msa1130890:CDS |
| TAAACTGCGCATCAATCTGA+AGG | 0.587511 | 7_3:-83156603 | None:intergenic |
| TTGATCGGCAAGATGAGAAG+TGG | 0.587863 | 7_3:-83156419 | None:intergenic |
| GGCTGAGTATGCAGATAATG+AGG | 0.588268 | 7_3:+83158471 | Msa1130890:CDS |
| AACCTTAAGACTGACTTGAT+CGG | 0.588364 | 7_3:-83156434 | None:intergenic |
| CCACTTGTTCTCTTCATCAG+CGG | 0.589362 | 7_3:-83156158 | None:intergenic |
| CACATCATCCACCATAGAAG+TGG | 0.589529 | 7_3:-83157433 | None:intergenic |
| CAAAGAACAACTTTGCACCA+AGG | 0.590204 | 7_3:-83157596 | None:intergenic |
| ATCTCAACTCCTCACCCCAA+CGG | 0.590832 | 7_3:+83156133 | Msa1130890:CDS |
| TAAACTAGGACTAGCTTGGA+TGG | 0.591809 | 7_3:-83159092 | None:intergenic |
| ATTCTCTCCCTTATGCAGCT+AGG | 0.593491 | 7_3:+83157195 | Msa1130890:CDS |
| ATTGGTGGAATCAATGTCCA+TGG | 0.595874 | 7_3:+83156864 | Msa1130890:CDS |
| GGCATCAATACGGTGGAGCG+TGG | 0.596725 | 7_3:-83156491 | None:intergenic |
| TCTAATAGTGGCCGTATCCG+TGG | 0.601268 | 7_3:-83158415 | None:intergenic |
| TTTCTGGTGATAAGTAGTTG+GGG | 0.604019 | 7_3:+83155977 | Msa1130890:five_prime_UTR |
| GAAGAAGCTTTCTTCCGCGG+TGG | 0.604461 | 7_3:+83156705 | Msa1130890:CDS |
| TTGTTGCCATTTGAGTAAGA+CGG | 0.604800 | 7_3:-83158747 | None:intergenic |
| TCAGAGACTTCTCCATGCTG+TGG | 0.604824 | 7_3:+83158510 | Msa1130890:CDS |
| GTTGGGGTGAGGAGTTGAGA+TGG | 0.609210 | 7_3:-83156131 | None:intergenic |
| CAACCATTACACCACGGATA+CGG | 0.610004 | 7_3:+83158404 | Msa1130890:CDS |
| GCGCACGGAGCACACCGTCA+AGG | 0.621746 | 7_3:-83156534 | None:intergenic |
| TGATCAGATTCAGATTCAGA+GGG | 0.624875 | 7_3:+83156639 | Msa1130890:CDS |
| AATCTTCAGTATCAAGCGCA+CGG | 0.626743 | 7_3:-83156549 | None:intergenic |
| TAATGAGGTGAATGACCCAT+GGG | 0.628569 | 7_3:+83158486 | Msa1130890:CDS |
| TAGCCTCACCACTTCTATGG+TGG | 0.629754 | 7_3:+83157425 | Msa1130890:CDS |
| CCCTCCTCTTCAAGACCAAG+CGG | 0.630628 | 7_3:-83156775 | None:intergenic |
| TCTGTTGTCGCGGTATTGAG+CGG | 0.630662 | 7_3:+83157510 | Msa1130890:CDS |
| GGAGAAGTCTCTGAACCCAT+GGG | 0.633691 | 7_3:-83158501 | None:intergenic |
| CAGGAGGAATGTGATTCAAG+GGG | 0.633768 | 7_3:+83157027 | Msa1130890:CDS |
| ATAATGAGGTGAATGACCCA+TGG | 0.634734 | 7_3:+83158485 | Msa1130890:CDS |
| CCGCTGATGAAGAGAACAAG+TGG | 0.637006 | 7_3:+83156158 | Msa1130890:CDS |
| TAATTGTTAGCGGTCATCAG+TGG | 0.637613 | 7_3:-83158556 | None:intergenic |
| TGCAATCTGTGAGCTTCAGG+AGG | 0.638445 | 7_3:+83157011 | Msa1130890:CDS |
| TCCGAGATTCTAGATTTCTG+GGG | 0.639717 | 7_3:+83158790 | Msa1130890:CDS |
| TGTCCATGGCCAATGAACAA+AGG | 0.643975 | 7_3:+83156878 | Msa1130890:CDS |
| AAGTTGCGCAGGATTTGACC+GGG | 0.647217 | 7_3:+83157325 | Msa1130890:CDS |
| GCGTTGGTGTGCAAAAGACA+GGG | 0.647827 | 7_3:+83157622 | Msa1130890:CDS |
| GCAATTACCACGCTCAACAA+TGG | 0.648507 | 7_3:-83156512 | None:intergenic |
| CAACAATGGCATCAATACGG+TGG | 0.649653 | 7_3:-83156498 | None:intergenic |
| CTGTGGAAACAAATGTGGGT+TGG | 0.655643 | 7_3:+83158527 | Msa1130890:CDS |
| AATTAGCTATGAGCTTTCGG+AGG | 0.655688 | 7_3:+83158450 | Msa1130890:CDS |
| AGCTAGTCCTAGTTTATACG+TGG | 0.663104 | 7_3:+83159099 | Msa1130890:three_prime_UTR |
| GTCCATCGATTTCGGCAAAG+CGG | 0.666135 | 7_3:+83156180 | Msa1130890:CDS |
| ATTGATGCCATTGTTGAGCG+TGG | 0.667784 | 7_3:+83156505 | Msa1130890:CDS |
| GTTGAATGAGATGACGATCG+AGG | 0.670005 | 7_3:-83156327 | None:intergenic |
| TGAAAGATTTGGTAGCACGA+GGG | 0.670196 | 7_3:-83157284 | None:intergenic |
| CATCCACCATAGAAGTGGTG+AGG | 0.670912 | 7_3:-83157428 | None:intergenic |
| TTGGACGATTTCGAGAACAT+CGG | 0.671444 | 7_3:-83156362 | None:intergenic |
| CTGGAGATTAACTCCAGCTG+AGG | 0.676130 | 7_3:+83158834 | Msa1130890:CDS |
| GACAGGGACAGATATTGCAG+CGG | 0.689833 | 7_3:+83157638 | Msa1130890:CDS |
| CGGCCACTATTAGACAGTGT+AGG | 0.691629 | 7_3:+83158424 | Msa1130890:CDS |
| TGAAGGACCTGATCCCAGAG+AGG | 0.694841 | 7_3:+83157152 | Msa1130890:CDS |
| GTTCGCACTCTCACCGACGT+CGG | 0.708658 | 7_3:+83156217 | Msa1130890:CDS |
| CATGCTGTGGAAACAAATGT+GGG | 0.715989 | 7_3:+83158523 | Msa1130890:CDS |
| AATTGAAGAACAGTGTGCTG+AGG | 0.731824 | 7_3:+83157713 | Msa1130890:CDS |
| ATGATCACGCTGATCCACCG+CGG | 0.753210 | 7_3:-83156719 | None:intergenic |
| TTGTAGCAACCATTACACCA+CGG | 0.761657 | 7_3:+83158398 | Msa1130890:CDS |
| ATTTCAGCATCATGACACAG+AGG | 0.774897 | 7_3:+83158704 | Msa1130890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTATTTTTTTAATAATT+TGG | + | chr7_3:83155918-83155937 | Msa1130890:five_prime_UTR | 0.0% |
| !! | TATTTACATAAATTTGTAGA+TGG | + | chr7_3:83157815-83157834 | Msa1130890:intron | 15.0% |
| !! | TAAAAGGATATAGATTAAAT+AGG | - | chr7_3:83158235-83158254 | None:intergenic | 15.0% |
| !!! | TGTTATTTTGAACAAATACA+TGG | + | chr7_3:83157053-83157072 | Msa1130890:CDS | 20.0% |
| !! | CGTTGTCAAATATATATAAA+CGG | - | chr7_3:83157767-83157786 | None:intergenic | 20.0% |
| !!! | TTATCTAAAACACATTTTGA+GGG | - | chr7_3:83157856-83157875 | None:intergenic | 20.0% |
| !!! | ATTATCTAAAACACATTTTG+AGG | - | chr7_3:83157857-83157876 | None:intergenic | 20.0% |
| !!! | TCAAAATGTGTTTTAGATAA+TGG | + | chr7_3:83157856-83157875 | Msa1130890:intron | 20.0% |
| !!! | CAAAATGTGTTTTAGATAAT+GGG | + | chr7_3:83157857-83157876 | Msa1130890:intron | 20.0% |
| !! | AAAATTATATCAGTCTTCAT+TGG | - | chr7_3:83157961-83157980 | None:intergenic | 20.0% |
| !! | AACAATTCTAAATTTGGAAA+AGG | + | chr7_3:83158765-83158784 | Msa1130890:CDS | 20.0% |
| !! | AAGTTGTAATATCATCTATA+TGG | + | chr7_3:83158913-83158932 | Msa1130890:exon | 20.0% |
| !!! | CTTTTTCTTTTTCTTTTTTC+CGG | + | chr7_3:83158944-83158963 | Msa1130890:three_prime_UTR | 20.0% |
| !! | ATACATATTAAGATGAAAAC+CGG | - | chr7_3:83158966-83158985 | None:intergenic | 20.0% |
| ! | TTGTAAAGATCAATTGTTTC+TGG | + | chr7_3:83155961-83155980 | Msa1130890:five_prime_UTR | 25.0% |
| ! | AATAATCGGAATCTGATAAT+TGG | + | chr7_3:83156048-83156067 | Msa1130890:five_prime_UTR | 25.0% |
| !! | TTTTCATGGTTGAAAATGTT+AGG | + | chr7_3:83157370-83157389 | Msa1130890:CDS | 25.0% |
| ! | GTCAAATATATATAAACGGA+AGG | - | chr7_3:83157763-83157782 | None:intergenic | 25.0% |
| !! | TCATTAGTGTCAATTTTCTT+TGG | + | chr7_3:83157933-83157952 | Msa1130890:intron | 25.0% |
| !!! | TATAATTTTGACGTCTACAA+AGG | + | chr7_3:83157972-83157991 | Msa1130890:intron | 25.0% |
| ! | AATTATCAAATTTGTACCAC+TGG | - | chr7_3:83158032-83158051 | None:intergenic | 25.0% |
| !! | GTTAATGCTGCAATTTTAAA+AGG | - | chr7_3:83158251-83158270 | None:intergenic | 25.0% |
| !!! | AAAAGTATCGTAATTGTTAG+CGG | - | chr7_3:83158569-83158588 | None:intergenic | 25.0% |
| !! | TTACGATACTTTTGTTCATT+TGG | + | chr7_3:83158576-83158595 | Msa1130890:CDS | 25.0% |
| !!! | TTATTGACTTCATTGTGAAA+AGG | + | chr7_3:83158599-83158618 | Msa1130890:CDS | 25.0% |
| ! | AATGGCAACAATTCTAAATT+TGG | + | chr7_3:83158759-83158778 | Msa1130890:CDS | 25.0% |
| AATACAAAACCTTGTTCATC+TGG | + | chr7_3:83156088-83156107 | Msa1130890:five_prime_UTR | 30.0% | |
| GATACTGAAGATTATGAATC+TGG | + | chr7_3:83156559-83156578 | Msa1130890:CDS | 30.0% | |
| GGGTATTTGAAAAAAGTCAT+TGG | + | chr7_3:83156814-83156833 | Msa1130890:CDS | 30.0% | |
| CTTAAACAAAGAAGTTAGAC+AGG | - | chr7_3:83156920-83156939 | None:intergenic | 30.0% | |
| ! | CTGTCTAACTTCTTTGTTTA+AGG | + | chr7_3:83156918-83156937 | Msa1130890:CDS | 30.0% |
| TTTGTTTAAGGACATTGTGT+TGG | + | chr7_3:83156930-83156949 | Msa1130890:CDS | 30.0% | |
| !! | AGATTTTGAGTGGTTTATGT+GGG | + | chr7_3:83156971-83156990 | Msa1130890:CDS | 30.0% |
| ! | CAGTTATCATCTGAGATAAA+TGG | + | chr7_3:83157093-83157112 | Msa1130890:CDS | 30.0% |
| ! | CAGCAAGTAAATTGTTGTTA+CGG | - | chr7_3:83157119-83157138 | None:intergenic | 30.0% |
| !! | AACAACAATTTACTTGCTGT+TGG | + | chr7_3:83157120-83157139 | Msa1130890:CDS | 30.0% |
| ATTTGTAGATGGTTGACTAT+AGG | + | chr7_3:83157826-83157845 | Msa1130890:intron | 30.0% | |
| AATGAATGTGAGCATTAAAC+AGG | - | chr7_3:83157918-83157937 | None:intergenic | 30.0% | |
| ! | AAACCTCCAATCATTTTAAG+GGG | - | chr7_3:83158098-83158117 | None:intergenic | 30.0% |
| ! | CAAACCTCCAATCATTTTAA+GGG | - | chr7_3:83158099-83158118 | None:intergenic | 30.0% |
| ! | ACAAACCTCCAATCATTTTA+AGG | - | chr7_3:83158100-83158119 | None:intergenic | 30.0% |
| ! | CTTTTATGAAGTCACAAACA+AGG | + | chr7_3:83158182-83158201 | Msa1130890:intron | 30.0% |
| !!! | CAAGGTCATTTTTTTATCTG+TGG | + | chr7_3:83158200-83158219 | Msa1130890:intron | 30.0% |
| ! | AAATCTTGTTTGTCTGAGTT+AGG | + | chr7_3:83158325-83158344 | Msa1130890:CDS | 30.0% |
| !! | TTCAAGCAAGCTTTAAATTC+TGG | + | chr7_3:83158364-83158383 | Msa1130890:CDS | 30.0% |
| AACAATTAGCTATGAGCTTT+CGG | + | chr7_3:83158447-83158466 | Msa1130890:CDS | 30.0% | |
| GGTAAATCTGATTACACTAA+TGG | - | chr7_3:83159074-83159093 | None:intergenic | 30.0% | |
| !! | TGTTTCTGGTGATAAGTAGT+TGG | + | chr7_3:83155975-83155994 | Msa1130890:five_prime_UTR | 35.0% |
| !! | GTTTCTGGTGATAAGTAGTT+GGG | + | chr7_3:83155976-83155995 | Msa1130890:five_prime_UTR | 35.0% |
| ! | TTTCTGGTGATAAGTAGTTG+GGG | + | chr7_3:83155977-83155996 | Msa1130890:five_prime_UTR | 35.0% |
| ACAGCAGCAACAACAATAAT+CGG | + | chr7_3:83156034-83156053 | Msa1130890:five_prime_UTR | 35.0% | |
| ! | GACATTGGAAAGCATGTAAT+CGG | - | chr7_3:83156395-83156414 | None:intergenic | 35.0% |
| !! | AACCTTAAGACTGACTTGAT+CGG | - | chr7_3:83156437-83156456 | None:intergenic | 35.0% |
| AAGATTATGAATCTGGTGCT+AGG | + | chr7_3:83156566-83156585 | Msa1130890:CDS | 35.0% | |
| TGATCAGATTCAGATTCAGA+GGG | + | chr7_3:83156639-83156658 | Msa1130890:CDS | 35.0% | |
| AAGTGAAGAAACAGCTTGAA+GGG | + | chr7_3:83156674-83156693 | Msa1130890:CDS | 35.0% | |
| AAGTCATTGGAATGAGATCT+AGG | + | chr7_3:83156827-83156846 | Msa1130890:CDS | 35.0% | |
| TAGGATGGAATTTGAGCAAT+TGG | + | chr7_3:83156846-83156865 | Msa1130890:CDS | 35.0% | |
| ATTGACACTCCTTTGTTCAT+TGG | - | chr7_3:83156890-83156909 | None:intergenic | 35.0% | |
| AATCTCACTGTTCTCTTCAA+TGG | - | chr7_3:83156956-83156975 | None:intergenic | 35.0% | |
| !! | GAGATTTTGAGTGGTTTATG+TGG | + | chr7_3:83156970-83156989 | Msa1130890:CDS | 35.0% |
| !! | GATTTTGAGTGGTTTATGTG+GGG | + | chr7_3:83156972-83156991 | Msa1130890:CDS | 35.0% |
| TGAACAAATACATGGAGTAC+AGG | + | chr7_3:83157061-83157080 | Msa1130890:CDS | 35.0% | |
| !! | AACAATTTACTTGCTGTTGG+AGG | + | chr7_3:83157123-83157142 | Msa1130890:CDS | 35.0% |
| CTCAAGAATGACATAAAACC+CGG | - | chr7_3:83157346-83157365 | None:intergenic | 35.0% | |
| !! | GGGTTTTATGTCATTCTTGA+GGG | + | chr7_3:83157345-83157364 | Msa1130890:CDS | 35.0% |
| ! | CATTCTTGAGGGATTTTTCA+TGG | + | chr7_3:83157356-83157375 | Msa1130890:CDS | 35.0% |
| CATGGTTGAAAATGTTAGGA+AGG | + | chr7_3:83157374-83157393 | Msa1130890:CDS | 35.0% | |
| AAAATGTTAGGAAGGCGATA+AGG | + | chr7_3:83157382-83157401 | Msa1130890:CDS | 35.0% | |
| AACAGAACTGATATTGGAAG+TGG | - | chr7_3:83157496-83157515 | None:intergenic | 35.0% | |
| AAAATTAGAGAGCCAAACCT+TGG | + | chr7_3:83157579-83157598 | Msa1130890:CDS | 35.0% | |
| TATCAAATTTGTACCACTGG+AGG | - | chr7_3:83158029-83158048 | None:intergenic | 35.0% | |
| AATGATTGGAGGTTTGTATG+TGG | + | chr7_3:83158103-83158122 | Msa1130890:intron | 35.0% | |
| CTAGCTGAATTACTTTATGC+AGG | + | chr7_3:83158270-83158289 | Msa1130890:intron | 35.0% | |
| CAGAAAAGATTTAGTCAGCT+TGG | + | chr7_3:83158640-83158659 | Msa1130890:CDS | 35.0% | |
| AAAAGATTTAGTCAGCTTGG+TGG | + | chr7_3:83158643-83158662 | Msa1130890:CDS | 35.0% | |
| ! | TTGTTGCCATTTGAGTAAGA+CGG | - | chr7_3:83158750-83158769 | None:intergenic | 35.0% |
| ! | TTGTTGTTGCTGCTGTTGTA+CGG | - | chr7_3:83156030-83156049 | None:intergenic | 40.0% |
| ATCTGGTACATTGCGCAAAA+TGG | + | chr7_3:83156105-83156124 | Msa1130890:exon | 40.0% | |
| TCTGGTACATTGCGCAAAAT+GGG | + | chr7_3:83156106-83156125 | Msa1130890:exon | 40.0% | |
| !! | AACAAGTGGTCCATCGATTT+CGG | + | chr7_3:83156172-83156191 | Msa1130890:CDS | 40.0% |
| AATGCATTCGTGAAGAAGAC+GGG | - | chr7_3:83156251-83156270 | None:intergenic | 40.0% | |
| CAATGCATTCGTGAAGAAGA+CGG | - | chr7_3:83156252-83156271 | None:intergenic | 40.0% | |
| TTGGACGATTTCGAGAACAT+CGG | - | chr7_3:83156365-83156384 | None:intergenic | 40.0% | |
| GCATGTAATCGGAATCAGAT+TGG | - | chr7_3:83156384-83156403 | None:intergenic | 40.0% | |
| ATGAGAAGTGGAAGTGACAT+TGG | - | chr7_3:83156410-83156429 | None:intergenic | 40.0% | |
| GCTCAACAATGGCATCAATA+CGG | - | chr7_3:83156504-83156523 | None:intergenic | 40.0% | |
| AATCTTCAGTATCAAGCGCA+CGG | - | chr7_3:83156552-83156571 | None:intergenic | 40.0% | |
| TAAACTGCGCATCAATCTGA+AGG | - | chr7_3:83156606-83156625 | None:intergenic | 40.0% | |
| TCAGATTGATGCGCAGTTTA+AGG | + | chr7_3:83156606-83156625 | Msa1130890:CDS | 40.0% | |
| CTGATCAGATTCAGATTCAG+AGG | + | chr7_3:83156638-83156657 | Msa1130890:CDS | 40.0% | |
| GAAGTGAAGAAACAGCTTGA+AGG | + | chr7_3:83156673-83156692 | Msa1130890:CDS | 40.0% | |
| GTGATCATCCTGCTATTCTT+AGG | + | chr7_3:83156734-83156753 | Msa1130890:CDS | 40.0% | |
| CGAACAAACCTAAGAATAGC+AGG | - | chr7_3:83156745-83156764 | None:intergenic | 40.0% | |
| CATTGGAATGAGATCTAGGA+TGG | + | chr7_3:83156831-83156850 | Msa1130890:CDS | 40.0% | |
| GATGGAATTTGAGCAATTGG+TGG | + | chr7_3:83156849-83156868 | Msa1130890:CDS | 40.0% | |
| ATTGGTGGAATCAATGTCCA+TGG | + | chr7_3:83156864-83156883 | Msa1130890:CDS | 40.0% | |
| ! | GAGAACAGTGAGATTTTGAG+TGG | + | chr7_3:83156961-83156980 | Msa1130890:CDS | 40.0% |
| TTCAGGAGGAATGTGATTCA+AGG | + | chr7_3:83157025-83157044 | Msa1130890:CDS | 40.0% | |
| TCAGGAGGAATGTGATTCAA+GGG | + | chr7_3:83157026-83157045 | Msa1130890:CDS | 40.0% | |
| ATACATGGAGTACAGGAAGT+TGG | + | chr7_3:83157068-83157087 | Msa1130890:CDS | 40.0% | |
| AAGTACAACTCAACCTCTCT+GGG | - | chr7_3:83157168-83157187 | None:intergenic | 40.0% | |
| ! | AGAAGTGAGAGCTTTGATCT+TGG | - | chr7_3:83157247-83157266 | None:intergenic | 40.0% |
| ! | TGAAAGATTTGGTAGCACGA+GGG | - | chr7_3:83157287-83157306 | None:intergenic | 40.0% |
| GCTACCAAATCTTTCAGAAG+TGG | + | chr7_3:83157291-83157310 | Msa1130890:CDS | 40.0% | |
| ! | GCTACCACTTCTGAAAGATT+TGG | - | chr7_3:83157298-83157317 | None:intergenic | 40.0% |
| !! | CGGGTTTTATGTCATTCTTG+AGG | + | chr7_3:83157344-83157363 | Msa1130890:CDS | 40.0% |
| TCTTACAAAGTTGCTTGCGA+AGG | + | chr7_3:83157463-83157482 | Msa1130890:CDS | 40.0% | |
| CTTACAAAGTTGCTTGCGAA+GGG | + | chr7_3:83157464-83157483 | Msa1130890:CDS | 40.0% | |
| CAATATCAGTTCTGTTGTCG+CGG | + | chr7_3:83157500-83157519 | Msa1130890:CDS | 40.0% | |
| AACAACTTTGCACCAAGGTT+TGG | - | chr7_3:83157594-83157613 | None:intergenic | 40.0% | |
| CAAAGAACAACTTTGCACCA+AGG | - | chr7_3:83157599-83157618 | None:intergenic | 40.0% | |
| ! | CTTGGTGCAAAGTTGTTCTT+TGG | + | chr7_3:83157597-83157616 | Msa1130890:CDS | 40.0% |
| !! | TGCAGCGGCTTTAAATAACA+TGG | + | chr7_3:83157653-83157672 | Msa1130890:CDS | 40.0% |
| AATTGAAGAACAGTGTGCTG+AGG | + | chr7_3:83157713-83157732 | Msa1130890:CDS | 40.0% | |
| !! | CTCCAATCATTTTAAGGGGA+GGG | - | chr7_3:83158094-83158113 | None:intergenic | 40.0% |
| ! | TTTACCTTTTCTCGATCAGC+TGG | - | chr7_3:83158307-83158326 | None:intergenic | 40.0% |
| TTGTAGCAACCATTACACCA+CGG | + | chr7_3:83158398-83158417 | Msa1130890:CDS | 40.0% | |
| GTTCCTACACTGTCTAATAG+TGG | - | chr7_3:83158430-83158449 | None:intergenic | 40.0% | |
| AATTAGCTATGAGCTTTCGG+AGG | + | chr7_3:83158450-83158469 | Msa1130890:CDS | 40.0% | |
| ATAATGAGGTGAATGACCCA+TGG | + | chr7_3:83158485-83158504 | Msa1130890:CDS | 40.0% | |
| TAATGAGGTGAATGACCCAT+GGG | + | chr7_3:83158486-83158505 | Msa1130890:CDS | 40.0% | |
| CATGCTGTGGAAACAAATGT+GGG | + | chr7_3:83158523-83158542 | Msa1130890:CDS | 40.0% | |
| TAATTGTTAGCGGTCATCAG+TGG | - | chr7_3:83158559-83158578 | None:intergenic | 40.0% | |
| ATTTCAGCATCATGACACAG+AGG | + | chr7_3:83158704-83158723 | Msa1130890:CDS | 40.0% | |
| ! | TGTTGCCATTTGAGTAAGAC+GGG | - | chr7_3:83158749-83158768 | None:intergenic | 40.0% |
| TCTCCGAGATTCTAGATTTC+TGG | + | chr7_3:83158788-83158807 | Msa1130890:CDS | 40.0% | |
| CTCCGAGATTCTAGATTTCT+GGG | + | chr7_3:83158789-83158808 | Msa1130890:CDS | 40.0% | |
| TCCGAGATTCTAGATTTCTG+GGG | + | chr7_3:83158790-83158809 | Msa1130890:CDS | 40.0% | |
| ! | ACCCCAGAAATCTAGAATCT+CGG | - | chr7_3:83158794-83158813 | None:intergenic | 40.0% |
| !! | TAAACTAGGACTAGCTTGGA+TGG | - | chr7_3:83159095-83159114 | None:intergenic | 40.0% |
| !! | CGTATAAACTAGGACTAGCT+TGG | - | chr7_3:83159099-83159118 | None:intergenic | 40.0% |
| AGCTAGTCCTAGTTTATACG+TGG | + | chr7_3:83159099-83159118 | Msa1130890:three_prime_UTR | 40.0% | |
| AGATGGTCCACGTATAAACT+AGG | - | chr7_3:83159109-83159128 | None:intergenic | 40.0% | |
| TGTTGTTGCTGCTGTTGTAC+GGG | - | chr7_3:83156029-83156048 | None:intergenic | 45.0% | |
| CGCAATGTACCAGATGAACA+AGG | - | chr7_3:83156100-83156119 | None:intergenic | 45.0% | |
| CCACTTGTTCTCTTCATCAG+CGG | - | chr7_3:83156161-83156180 | None:intergenic | 45.0% | |
| GTTGAATGAGATGACGATCG+AGG | - | chr7_3:83156330-83156349 | None:intergenic | 45.0% | |
| TTGATCGGCAAGATGAGAAG+TGG | - | chr7_3:83156422-83156441 | None:intergenic | 45.0% | |
| TGCCGATCAAGTCAGTCTTA+AGG | + | chr7_3:83156432-83156451 | Msa1130890:CDS | 45.0% | |
| CAACAATGGCATCAATACGG+TGG | - | chr7_3:83156501-83156520 | None:intergenic | 45.0% | |
| ATTGATGCCATTGTTGAGCG+TGG | + | chr7_3:83156505-83156524 | Msa1130890:CDS | 45.0% | |
| GCAATTACCACGCTCAACAA+TGG | - | chr7_3:83156515-83156534 | None:intergenic | 45.0% | |
| GATGCGCAGTTTAAGGATTC+TGG | + | chr7_3:83156613-83156632 | Msa1130890:CDS | 45.0% | |
| GATTCAGAGGGAACGTTTGT+TGG | + | chr7_3:83156651-83156670 | Msa1130890:CDS | 45.0% | |
| AACAGCTTGAAGGGATTGTC+AGG | + | chr7_3:83156683-83156702 | Msa1130890:CDS | 45.0% | |
| AGGGTTTGCAGGTGTATGTT+GGG | + | chr7_3:83156794-83156813 | Msa1130890:CDS | 45.0% | |
| TGTCCATGGCCAATGAACAA+AGG | + | chr7_3:83156878-83156897 | Msa1130890:CDS | 45.0% | |
| ACTCCTTTGTTCATTGGCCA+TGG | - | chr7_3:83156884-83156903 | None:intergenic | 45.0% | |
| TTTGAGTGGTTTATGTGGGG+AGG | + | chr7_3:83156975-83156994 | Msa1130890:CDS | 45.0% | |
| GTATGCAATCTGTGAGCTTC+AGG | + | chr7_3:83157008-83157027 | Msa1130890:CDS | 45.0% | |
| CAGGAGGAATGTGATTCAAG+GGG | + | chr7_3:83157027-83157046 | Msa1130890:CDS | 45.0% | |
| CAAGTACAACTCAACCTCTC+TGG | - | chr7_3:83157169-83157188 | None:intergenic | 45.0% | |
| ! | CAGAGAGGTTGAGTTGTACT+TGG | + | chr7_3:83157167-83157186 | Msa1130890:CDS | 45.0% |
| ATTCTCTCCCTTATGCAGCT+AGG | + | chr7_3:83157195-83157214 | Msa1130890:CDS | 45.0% | |
| ATCCTCACCTAGCTGCATAA+GGG | - | chr7_3:83157205-83157224 | None:intergenic | 45.0% | |
| AATCCTCACCTAGCTGCATA+AGG | - | chr7_3:83157206-83157225 | None:intergenic | 45.0% | |
| ! | CTGAAAGATTTGGTAGCACG+AGG | - | chr7_3:83157288-83157307 | None:intergenic | 45.0% |
| AAAGTTGCGCAGGATTTGAC+CGG | + | chr7_3:83157324-83157343 | Msa1130890:CDS | 45.0% | |
| TAGAAGTGGTGAGGCTATCA+GGG | - | chr7_3:83157422-83157441 | None:intergenic | 45.0% | |
| ATAGAAGTGGTGAGGCTATC+AGG | - | chr7_3:83157423-83157442 | None:intergenic | 45.0% | |
| TGATAGCCTCACCACTTCTA+TGG | + | chr7_3:83157422-83157441 | Msa1130890:CDS | 45.0% | |
| CACATCATCCACCATAGAAG+TGG | - | chr7_3:83157436-83157455 | None:intergenic | 45.0% | |
| CGCGACAACAGAACTGATAT+TGG | - | chr7_3:83157502-83157521 | None:intergenic | 45.0% | |
| GGTGCAAAGTTGTTCTTTGG+AGG | + | chr7_3:83157600-83157619 | Msa1130890:CDS | 45.0% | |
| ! | AAGTTGTTCTTTGGAGGCGT+TGG | + | chr7_3:83157606-83157625 | Msa1130890:CDS | 45.0% |
| !! | CAATCATTTTAAGGGGAGGG+AGG | - | chr7_3:83158091-83158110 | None:intergenic | 45.0% |
| CTCCCTCCCCTTAAAATGAT+TGG | + | chr7_3:83158089-83158108 | Msa1130890:intron | 45.0% | |
| !! | CCTCCAATCATTTTAAGGGG+AGG | - | chr7_3:83158095-83158114 | None:intergenic | 45.0% |
| CCTCCCCTTAAAATGATTGG+AGG | + | chr7_3:83158092-83158111 | Msa1130890:intron | 45.0% | |
| CAACCATTACACCACGGATA+CGG | + | chr7_3:83158404-83158423 | Msa1130890:CDS | 45.0% | |
| GGCTGAGTATGCAGATAATG+AGG | + | chr7_3:83158471-83158490 | Msa1130890:CDS | 45.0% | |
| CCACATTTGTTTCCACAGCA+TGG | - | chr7_3:83158525-83158544 | None:intergenic | 45.0% | |
| CCATGCTGTGGAAACAAATG+TGG | + | chr7_3:83158522-83158541 | Msa1130890:CDS | 45.0% | |
| CTGTGGAAACAAATGTGGGT+TGG | + | chr7_3:83158527-83158546 | Msa1130890:CDS | 45.0% | |
| GTTTGCCCGTCTTACTCAAA+TGG | + | chr7_3:83158741-83158760 | Msa1130890:CDS | 45.0% | |
| !! | ATTTCTGGGGTGAGAACTCT+GGG | + | chr7_3:83158803-83158822 | Msa1130890:CDS | 45.0% |
| GGAGTTAATCTCCAGGTCAT+AGG | - | chr7_3:83158829-83158848 | None:intergenic | 45.0% | |
| GATTAACTCCAGCTGAGGTT+AGG | + | chr7_3:83158839-83158858 | Msa1130890:CDS | 45.0% | |
| TTCAGAGCAGCTATTGCTTC+TGG | - | chr7_3:83158895-83158914 | None:intergenic | 45.0% | |
| ATCTCAACTCCTCACCCCAA+CGG | + | chr7_3:83156133-83156152 | Msa1130890:CDS | 50.0% | |
| TCTTCATCAGCGGATCCGTT+GGG | - | chr7_3:83156151-83156170 | None:intergenic | 50.0% | |
| CCGCTGATGAAGAGAACAAG+TGG | + | chr7_3:83156158-83156177 | Msa1130890:CDS | 50.0% | |
| !! | GTCCATCGATTTCGGCAAAG+CGG | + | chr7_3:83156180-83156199 | Msa1130890:CDS | 50.0% |
| TTCCGCTTTGCCGAAATCGA+TGG | - | chr7_3:83156185-83156204 | None:intergenic | 50.0% | |
| GACGATTTCGAGAACATCGG+AGG | - | chr7_3:83156362-83156381 | None:intergenic | 50.0% | |
| GAGCGTGGTAATTGCCTTGA+CGG | + | chr7_3:83156520-83156539 | Msa1130890:CDS | 50.0% | |
| CAGGAAGAAGCTTTCTTCCG+CGG | + | chr7_3:83156702-83156721 | Msa1130890:CDS | 50.0% | |
| GTTCGTCTTTACACTCCGCT+TGG | + | chr7_3:83156760-83156779 | Msa1130890:CDS | 50.0% | |
| TCTTGAAGAGGAGGGTTTGC+AGG | + | chr7_3:83156783-83156802 | Msa1130890:CDS | 50.0% | |
| GAGGGTTTGCAGGTGTATGT+TGG | + | chr7_3:83156793-83156812 | Msa1130890:CDS | 50.0% | |
| AGTGGTTTATGTGGGGAGGA+TGG | + | chr7_3:83156979-83156998 | Msa1130890:CDS | 50.0% | |
| TGCAATCTGTGAGCTTCAGG+AGG | + | chr7_3:83157011-83157030 | Msa1130890:CDS | 50.0% | |
| GCTGTTGGAGGAGTTTCTGA+AGG | + | chr7_3:83157135-83157154 | Msa1130890:CDS | 50.0% | |
| !! | AACTCAACCTCTCTGGGATC+AGG | - | chr7_3:83157162-83157181 | None:intergenic | 50.0% |
| TAGCTTCAGCAAAGTTGCGC+AGG | + | chr7_3:83157314-83157333 | Msa1130890:CDS | 50.0% | |
| AAGTTGCGCAGGATTTGACC+GGG | + | chr7_3:83157325-83157344 | Msa1130890:CDS | 50.0% | |
| TAGCCTCACCACTTCTATGG+TGG | + | chr7_3:83157425-83157444 | Msa1130890:CDS | 50.0% | |
| CATCCACCATAGAAGTGGTG+AGG | - | chr7_3:83157431-83157450 | None:intergenic | 50.0% | |
| ! | TCTGTTGTCGCGGTATTGAG+CGG | + | chr7_3:83157510-83157529 | Msa1130890:CDS | 50.0% |
| ! | GCGTTGGTGTGCAAAAGACA+GGG | + | chr7_3:83157622-83157641 | Msa1130890:CDS | 50.0% |
| GACAGGGACAGATATTGCAG+CGG | + | chr7_3:83157638-83157657 | Msa1130890:CDS | 50.0% | |
| GAAGAACAGTGTGCTGAGGT+AGG | + | chr7_3:83157717-83157736 | Msa1130890:intron | 50.0% | |
| TCTAATAGTGGCCGTATCCG+TGG | - | chr7_3:83158418-83158437 | None:intergenic | 50.0% | |
| CGGCCACTATTAGACAGTGT+AGG | + | chr7_3:83158424-83158443 | Msa1130890:CDS | 50.0% | |
| GGAGAAGTCTCTGAACCCAT+GGG | - | chr7_3:83158504-83158523 | None:intergenic | 50.0% | |
| TGGAGAAGTCTCTGAACCCA+TGG | - | chr7_3:83158505-83158524 | None:intergenic | 50.0% | |
| TCAGAGACTTCTCCATGCTG+TGG | + | chr7_3:83158510-83158529 | Msa1130890:CDS | 50.0% | |
| !! | GATTTCTGGGGTGAGAACTC+TGG | + | chr7_3:83158802-83158821 | Msa1130890:CDS | 50.0% |
| CTCAGCTGGAGTTAATCTCC+AGG | - | chr7_3:83158836-83158855 | None:intergenic | 50.0% | |
| CTGGAGATTAACTCCAGCTG+AGG | + | chr7_3:83158834-83158853 | Msa1130890:CDS | 50.0% | |
| AATACACGCCTAACCTCAGC+TGG | - | chr7_3:83158850-83158869 | None:intergenic | 50.0% | |
| AGCTGAGGTTAGGCGTGTAT+TGG | + | chr7_3:83158849-83158868 | Msa1130890:CDS | 50.0% | |
| GCTGAGGTTAGGCGTGTATT+GGG | + | chr7_3:83158850-83158869 | Msa1130890:CDS | 50.0% | |
| GTTGGGGTGAGGAGTTGAGA+TGG | - | chr7_3:83156134-83156153 | None:intergenic | 55.0% | |
| CTTCATCAGCGGATCCGTTG+GGG | - | chr7_3:83156150-83156169 | None:intergenic | 55.0% | |
| CTCTTCATCAGCGGATCCGT+TGG | - | chr7_3:83156152-83156171 | None:intergenic | 55.0% | |
| GAAGAAGCTTTCTTCCGCGG+TGG | + | chr7_3:83156705-83156724 | Msa1130890:CDS | 55.0% | |
| ATGATCACGCTGATCCACCG+CGG | - | chr7_3:83156722-83156741 | None:intergenic | 55.0% | |
| !! | CACTCCGCTTGGTCTTGAAG+AGG | + | chr7_3:83156771-83156790 | Msa1130890:CDS | 55.0% |
| !! | TCCGCTTGGTCTTGAAGAGG+AGG | + | chr7_3:83156774-83156793 | Msa1130890:CDS | 55.0% |
| CCCTCCTCTTCAAGACCAAG+CGG | - | chr7_3:83156778-83156797 | None:intergenic | 55.0% | |
| !! | CCGCTTGGTCTTGAAGAGGA+GGG | + | chr7_3:83156775-83156794 | Msa1130890:CDS | 55.0% |
| TGAAGGACCTGATCCCAGAG+AGG | + | chr7_3:83157152-83157171 | Msa1130890:CDS | 55.0% | |
| CTCCCTTATGCAGCTAGGTG+AGG | + | chr7_3:83157200-83157219 | Msa1130890:CDS | 55.0% | |
| GTAGCACGAGGGAGCAATTC+GGG | - | chr7_3:83157276-83157295 | None:intergenic | 55.0% | |
| GGTAGCACGAGGGAGCAATT+CGG | - | chr7_3:83157277-83157296 | None:intergenic | 55.0% | |
| !! | GGCGTTGGTGTGCAAAAGAC+AGG | + | chr7_3:83157621-83157640 | Msa1130890:CDS | 55.0% |
| GAACAGTGTGCTGAGGTAGG+TGG | + | chr7_3:83157720-83157739 | Msa1130890:intron | 55.0% | |
| TATCCTGAGTGTGCCTCCAG+TGG | + | chr7_3:83158013-83158032 | Msa1130890:intron | 55.0% | |
| AAGGGGAGGGAGGACAATTG+TGG | - | chr7_3:83158081-83158100 | None:intergenic | 55.0% | |
| ! | TTTTCTCGATCAGCTGGCGC+AGG | - | chr7_3:83158301-83158320 | None:intergenic | 55.0% |
| TGCGCCAGCTGATCGAGAAA+AGG | + | chr7_3:83158300-83158319 | Msa1130890:CDS | 55.0% | |
| TGGCCGTATCCGTGGTGTAA+TGG | - | chr7_3:83158410-83158429 | None:intergenic | 55.0% | |
| AGAACTCTGGGCCTATGACC+TGG | + | chr7_3:83158815-83158834 | Msa1130890:CDS | 55.0% | |
| GTTCGCACTCTCACCGACGT+CGG | + | chr7_3:83156217-83156236 | Msa1130890:CDS | 60.0% | |
| ACGGGTCATAGCTCCGACGT+CGG | - | chr7_3:83156233-83156252 | None:intergenic | 60.0% | |
| GGCATCAATACGGTGGAGCG+TGG | - | chr7_3:83156494-83156513 | None:intergenic | 60.0% | |
| ! | GTACCACTGGAGGCACACTC+AGG | - | chr7_3:83158019-83158038 | None:intergenic | 60.0% |
| TCAGCGGATCCGTTGGGGTG+AGG | - | chr7_3:83156145-83156164 | None:intergenic | 65.0% | |
| GCGCACGGAGCACACCGTCA+AGG | - | chr7_3:83156537-83156556 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 83155880 | 83159138 | 83155880 | ID=Msa1130890;Name=Msa1130890 |
| chr7_3 | mRNA | 83155880 | 83159138 | 83155880 | ID=Msa1130890-mRNA-1;Parent=Msa1130890;Name=Msa1130890-mRNA-1;_AED=0.00;_eAED=0.00;_QI=244|1|1|1|1|1|2|217|746 |
| chr7_3 | exon | 83155880 | 83157734 | 83155880 | ID=Msa1130890-mRNA-1:exon:24653;Parent=Msa1130890-mRNA-1 |
| chr7_3 | exon | 83158292 | 83159138 | 83158292 | ID=Msa1130890-mRNA-1:exon:24654;Parent=Msa1130890-mRNA-1 |
| chr7_3 | five_prime_UTR | 83155880 | 83156123 | 83155880 | ID=Msa1130890-mRNA-1:five_prime_utr;Parent=Msa1130890-mRNA-1 |
| chr7_3 | CDS | 83156124 | 83157734 | 83156124 | ID=Msa1130890-mRNA-1:cds;Parent=Msa1130890-mRNA-1 |
| chr7_3 | CDS | 83158292 | 83158921 | 83158292 | ID=Msa1130890-mRNA-1:cds;Parent=Msa1130890-mRNA-1 |
| chr7_3 | three_prime_UTR | 83158922 | 83159138 | 83158922 | ID=Msa1130890-mRNA-1:three_prime_utr;Parent=Msa1130890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
