Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0692140 | XP_013456733.1 | 69.231 | 130 | 33 | 2 | 6 | 135 | 1 | 123 | 6.76e-52 | 182 |
Msa0692140 | XP_013456733.1 | 86.413 | 184 | 19 | 2 | 216 | 397 | 2 | 181 | 6.59e-101 | 307 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0692140 | sp|Q9FIU6|ORRM2_ARATH | 62.963 | 135 | 44 | 1 | 1 | 135 | 7 | 135 | 1.95e-48 | 164 |
Msa0692140 | sp|Q9FIU6|ORRM2_ARATH | 60.656 | 122 | 44 | 1 | 218 | 339 | 18 | 135 | 1.41e-41 | 147 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0692140 | I3S3X3 | 69.231 | 130 | 33 | 2 | 6 | 135 | 1 | 123 | 3.23e-52 | 182 |
Msa0692140 | I3S3X3 | 86.413 | 184 | 19 | 2 | 216 | 397 | 2 | 181 | 3.15e-101 | 307 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0609530 | Msa0692140 | 0.917245 | 6.715219e-86 | -8.615850e-47 |
Msa0650170 | Msa0692140 | 0.832958 | 7.021750e-56 | -8.615850e-47 |
Msa0555840 | Msa0692140 | 0.959579 | 1.345554e-117 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0692140 | MtrunA17_Chr4g0042151 | 86.413 | 184 | 19 | 2 | 216 | 397 | 2 | 181 | 6.06e-105 | 307 |
Msa0692140 | MtrunA17_Chr4g0042151 | 69.231 | 130 | 33 | 2 | 6 | 135 | 1 | 123 | 6.22e-56 | 182 |
Msa0692140 | MtrunA17_Chr4g0042161 | 92.361 | 144 | 6 | 1 | 1 | 144 | 1 | 139 | 6.33e-90 | 268 |
Msa0692140 | MtrunA17_Chr4g0042161 | 71.429 | 119 | 31 | 1 | 221 | 339 | 15 | 130 | 3.31e-48 | 160 |
Msa0692140 | MtrunA17_Chr7g0263001 | 57.831 | 83 | 35 | 0 | 55 | 137 | 34 | 116 | 6.41e-26 | 102 |
Msa0692140 | MtrunA17_Chr7g0263001 | 50.000 | 78 | 39 | 0 | 262 | 339 | 37 | 114 | 1.06e-21 | 90.5 |
Msa0692140 | MtrunA17_Chr6g0481071 | 50.000 | 96 | 48 | 0 | 40 | 135 | 79 | 174 | 2.43e-24 | 99.0 |
Msa0692140 | MtrunA17_Chr6g0481071 | 46.835 | 79 | 42 | 0 | 262 | 340 | 97 | 175 | 8.97e-22 | 92.0 |
Msa0692140 | MtrunA17_Chr7g0266751 | 50.649 | 77 | 38 | 0 | 58 | 134 | 34 | 110 | 9.63e-20 | 85.1 |
Msa0692140 | MtrunA17_Chr7g0266751 | 45.570 | 79 | 43 | 0 | 262 | 340 | 34 | 112 | 6.00e-18 | 80.1 |
Msa0692140 | MtrunA17_Chr4g0061451 | 41.837 | 98 | 52 | 1 | 44 | 136 | 25 | 122 | 1.52e-19 | 87.8 |
Msa0692140 | MtrunA17_Chr4g0061451 | 41.176 | 85 | 48 | 1 | 258 | 340 | 40 | 124 | 1.29e-14 | 73.6 |
Msa0692140 | MtrunA17_Chr1g0198431 | 45.000 | 80 | 44 | 0 | 58 | 137 | 194 | 273 | 1.65e-18 | 85.1 |
Msa0692140 | MtrunA17_Chr1g0198431 | 38.298 | 94 | 51 | 2 | 262 | 352 | 194 | 283 | 3.31e-16 | 78.6 |
Msa0692140 | MtrunA17_Chr3g0086861 | 46.512 | 86 | 46 | 0 | 54 | 139 | 42 | 127 | 4.69e-18 | 85.5 |
Msa0692140 | MtrunA17_Chr3g0086861 | 45.455 | 88 | 44 | 2 | 255 | 339 | 39 | 125 | 5.91e-15 | 76.3 |
Msa0692140 | MtrunA17_Chr7g0219021 | 42.353 | 85 | 49 | 0 | 55 | 139 | 39 | 123 | 5.59e-17 | 80.1 |
Msa0692140 | MtrunA17_Chr7g0219021 | 42.308 | 78 | 45 | 0 | 262 | 339 | 42 | 119 | 6.42e-15 | 73.9 |
Msa0692140 | MtrunA17_Chr3g0121631 | 41.414 | 99 | 55 | 2 | 39 | 137 | 21 | 116 | 1.66e-16 | 76.3 |
Msa0692140 | MtrunA17_Chr3g0121631 | 41.026 | 78 | 45 | 1 | 262 | 339 | 38 | 114 | 2.56e-13 | 67.0 |
Msa0692140 | MtrunA17_Chr7g0219031 | 45.205 | 73 | 40 | 0 | 55 | 127 | 39 | 111 | 3.15e-15 | 71.6 |
Msa0692140 | MtrunA17_Chr7g0219031 | 40.000 | 90 | 49 | 2 | 243 | 331 | 26 | 111 | 9.10e-15 | 70.5 |
Msa0692140 | MtrunA17_Chr3g0088511 | 38.889 | 90 | 51 | 1 | 55 | 144 | 31 | 116 | 4.76e-14 | 68.9 |
Msa0692140 | MtrunA17_Chr3g0088511 | 41.558 | 77 | 45 | 0 | 262 | 338 | 34 | 110 | 5.95e-13 | 65.9 |
Msa0692140 | MtrunA17_Chr4g0018581 | 45.833 | 72 | 39 | 0 | 56 | 127 | 451 | 522 | 2.24e-13 | 72.0 |
Msa0692140 | MtrunA17_Chr4g0035001 | 40.541 | 74 | 44 | 0 | 51 | 124 | 1 | 74 | 6.93e-13 | 66.2 |
Msa0692140 | MtrunA17_Chr4g0035051 | 38.356 | 73 | 45 | 0 | 52 | 124 | 4 | 76 | 7.58e-13 | 65.1 |
Msa0692140 | MtrunA17_Chr4g0035051 | 35.526 | 76 | 49 | 0 | 253 | 328 | 1 | 76 | 2.21e-11 | 60.8 |
Msa0692140 | MtrunA17_Chr2g0327921 | 38.750 | 80 | 49 | 0 | 56 | 135 | 7 | 86 | 1.94e-12 | 62.8 |
Msa0692140 | MtrunA17_Chr4g0050781 | 41.489 | 94 | 47 | 3 | 53 | 143 | 4 | 92 | 3.98e-12 | 65.1 |
Msa0692140 | MtrunA17_Chr2g0278661 | 41.026 | 78 | 46 | 0 | 58 | 135 | 9 | 86 | 1.64e-11 | 63.9 |
Msa0692140 | MtrunA17_Chr3g0119311 | 42.500 | 80 | 44 | 2 | 58 | 136 | 38 | 116 | 2.97e-11 | 60.8 |
Msa0692140 | MtrunA17_Chr3g0119311 | 36.207 | 116 | 68 | 4 | 242 | 353 | 18 | 131 | 4.64e-11 | 60.5 |
Msa0692140 | MtrunA17_Chr4g0031091 | 34.615 | 78 | 51 | 0 | 55 | 132 | 32 | 109 | 4.25e-11 | 59.7 |
Msa0692140 | MtrunA17_Chr8g0349601 | 32.231 | 121 | 74 | 2 | 228 | 340 | 159 | 279 | 4.89e-11 | 63.2 |
Msa0692140 | MtrunA17_Chr4g0035031 | 42.424 | 66 | 38 | 0 | 59 | 124 | 11 | 76 | 5.84e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0692140 | AT5G54580.1 | 62.963 | 135 | 44 | 1 | 1 | 135 | 7 | 135 | 1.98e-49 | 164 |
Msa0692140 | AT5G54580.1 | 60.656 | 122 | 44 | 1 | 218 | 339 | 18 | 135 | 1.43e-42 | 147 |
Msa0692140 | AT2G37510.1 | 63.014 | 73 | 27 | 0 | 58 | 130 | 36 | 108 | 1.39e-24 | 98.6 |
Msa0692140 | AT2G37510.1 | 54.795 | 73 | 33 | 0 | 262 | 334 | 36 | 108 | 2.46e-21 | 89.7 |
Msa0692140 | AT1G73530.1 | 47.872 | 94 | 49 | 0 | 54 | 147 | 75 | 168 | 7.49e-24 | 97.8 |
Msa0692140 | AT1G73530.1 | 44.048 | 84 | 47 | 0 | 258 | 341 | 75 | 158 | 1.86e-19 | 85.9 |
Msa0692140 | AT2G37510.2 | 46.939 | 98 | 27 | 1 | 58 | 130 | 36 | 133 | 4.64e-19 | 84.3 |
Msa0692140 | AT2G37510.2 | 40.816 | 98 | 33 | 1 | 262 | 334 | 36 | 133 | 4.98e-16 | 75.9 |
Msa0692140 | AT5G06210.1 | 44.706 | 85 | 47 | 0 | 55 | 139 | 33 | 117 | 4.97e-17 | 77.8 |
Msa0692140 | AT5G06210.1 | 42.308 | 78 | 45 | 0 | 262 | 339 | 36 | 113 | 6.28e-15 | 72.0 |
Msa0692140 | AT3G20930.1 | 41.772 | 79 | 46 | 0 | 58 | 136 | 284 | 362 | 4.74e-16 | 79.3 |
Msa0692140 | AT3G20930.1 | 26.263 | 198 | 114 | 4 | 151 | 339 | 187 | 361 | 2.37e-15 | 77.4 |
Msa0692140 | AT5G61030.2 | 43.902 | 82 | 46 | 0 | 54 | 135 | 38 | 119 | 1.18e-15 | 77.4 |
Msa0692140 | AT5G61030.2 | 44.304 | 79 | 44 | 0 | 262 | 340 | 42 | 120 | 7.63e-15 | 75.1 |
Msa0692140 | AT5G61030.1 | 43.902 | 82 | 46 | 0 | 54 | 135 | 38 | 119 | 1.18e-15 | 77.4 |
Msa0692140 | AT5G61030.1 | 44.304 | 79 | 44 | 0 | 262 | 340 | 42 | 120 | 7.63e-15 | 75.1 |
Msa0692140 | AT4G13850.4 | 47.561 | 82 | 43 | 0 | 55 | 136 | 34 | 115 | 3.97e-15 | 72.0 |
Msa0692140 | AT4G13850.4 | 44.776 | 67 | 37 | 0 | 262 | 328 | 37 | 103 | 1.34e-11 | 62.0 |
Msa0692140 | AT3G46020.1 | 40.506 | 79 | 47 | 0 | 55 | 133 | 6 | 84 | 9.61e-15 | 70.1 |
Msa0692140 | AT3G46020.1 | 36.842 | 76 | 48 | 0 | 262 | 337 | 9 | 84 | 1.51e-14 | 69.7 |
Msa0692140 | AT1G18630.1 | 48.611 | 72 | 37 | 0 | 56 | 127 | 36 | 107 | 1.26e-14 | 71.2 |
Msa0692140 | AT1G18630.1 | 47.143 | 70 | 37 | 0 | 262 | 331 | 38 | 107 | 1.45e-12 | 65.5 |
Msa0692140 | AT3G23830.2 | 41.584 | 101 | 56 | 1 | 37 | 137 | 19 | 116 | 1.54e-14 | 70.5 |
Msa0692140 | AT3G23830.2 | 41.975 | 81 | 47 | 0 | 262 | 342 | 37 | 117 | 1.26e-13 | 68.2 |
Msa0692140 | AT3G23830.1 | 41.584 | 101 | 56 | 1 | 37 | 137 | 19 | 116 | 1.54e-14 | 70.5 |
Msa0692140 | AT3G23830.1 | 41.975 | 81 | 47 | 0 | 262 | 342 | 37 | 117 | 1.26e-13 | 68.2 |
Msa0692140 | AT4G13850.3 | 47.561 | 82 | 43 | 0 | 55 | 136 | 34 | 115 | 1.64e-14 | 70.9 |
Msa0692140 | AT4G13850.3 | 36.111 | 108 | 55 | 2 | 228 | 328 | 3 | 103 | 9.53e-12 | 62.8 |
Msa0692140 | AT4G13850.2 | 47.561 | 82 | 43 | 0 | 55 | 136 | 34 | 115 | 2.02e-14 | 70.9 |
Msa0692140 | AT4G13850.2 | 36.111 | 108 | 55 | 2 | 228 | 328 | 3 | 103 | 1.16e-11 | 62.8 |
Msa0692140 | AT4G13850.1 | 47.561 | 82 | 43 | 0 | 55 | 136 | 34 | 115 | 2.26e-14 | 70.9 |
Msa0692140 | AT4G13850.1 | 36.111 | 108 | 55 | 2 | 228 | 328 | 3 | 103 | 1.28e-11 | 62.8 |
Msa0692140 | AT4G13860.1 | 47.143 | 70 | 37 | 0 | 55 | 124 | 2 | 71 | 3.66e-14 | 68.2 |
Msa0692140 | AT4G13860.1 | 43.284 | 67 | 38 | 0 | 262 | 328 | 5 | 71 | 5.96e-12 | 61.6 |
Msa0692140 | AT3G20930.2 | 39.286 | 84 | 46 | 1 | 58 | 136 | 284 | 367 | 4.74e-14 | 73.6 |
Msa0692140 | AT3G20930.2 | 25.616 | 203 | 114 | 5 | 151 | 339 | 187 | 366 | 2.43e-13 | 71.2 |
Msa0692140 | AT4G39260.3 | 39.326 | 89 | 54 | 0 | 51 | 139 | 1 | 89 | 1.21e-13 | 66.6 |
Msa0692140 | AT2G43370.2 | 35.417 | 96 | 62 | 0 | 44 | 139 | 52 | 147 | 1.23e-13 | 69.7 |
Msa0692140 | AT5G59865.1 | 43.750 | 80 | 45 | 0 | 56 | 135 | 26 | 105 | 2.72e-13 | 66.2 |
Msa0692140 | AT5G59865.1 | 39.744 | 78 | 47 | 0 | 262 | 339 | 28 | 105 | 4.95e-11 | 60.1 |
Msa0692140 | AT2G43370.1 | 35.417 | 96 | 62 | 0 | 44 | 139 | 52 | 147 | 5.94e-13 | 69.7 |
Msa0692140 | AT5G47320.1 | 38.144 | 97 | 57 | 1 | 40 | 136 | 18 | 111 | 7.12e-13 | 67.8 |
Msa0692140 | AT4G39260.2 | 39.759 | 83 | 50 | 0 | 51 | 133 | 1 | 83 | 9.47e-13 | 65.1 |
Msa0692140 | AT1G74230.1 | 43.590 | 78 | 43 | 1 | 55 | 132 | 33 | 109 | 1.58e-12 | 68.2 |
Msa0692140 | AT5G51300.1 | 37.500 | 96 | 55 | 2 | 32 | 127 | 461 | 551 | 4.27e-12 | 68.6 |
Msa0692140 | AT5G51300.2 | 37.500 | 96 | 55 | 2 | 32 | 127 | 461 | 551 | 4.27e-12 | 68.6 |
Msa0692140 | AT5G51300.3 | 37.500 | 96 | 55 | 2 | 32 | 127 | 461 | 551 | 4.27e-12 | 68.6 |
Msa0692140 | AT4G24770.1 | 36.000 | 100 | 64 | 0 | 38 | 137 | 226 | 325 | 6.57e-12 | 66.6 |
Msa0692140 | AT4G24770.2 | 36.000 | 100 | 64 | 0 | 38 | 137 | 226 | 325 | 6.57e-12 | 66.6 |
Msa0692140 | AT4G39260.1 | 41.558 | 77 | 45 | 0 | 51 | 127 | 1 | 77 | 6.85e-12 | 63.9 |
Msa0692140 | AT3G08000.1 | 41.463 | 82 | 48 | 0 | 58 | 139 | 43 | 124 | 1.53e-11 | 62.4 |
Msa0692140 | AT3G08000.1 | 43.284 | 67 | 38 | 0 | 262 | 328 | 43 | 109 | 5.38e-11 | 60.8 |
Msa0692140 | AT3G26420.1 | 37.805 | 82 | 51 | 0 | 53 | 134 | 4 | 85 | 4.77e-11 | 63.2 |
Msa0692140 | AT3G11400.2 | 33.051 | 118 | 63 | 2 | 35 | 136 | 203 | 320 | 4.83e-11 | 63.9 |
Msa0692140 | AT3G11400.1 | 33.051 | 118 | 63 | 2 | 35 | 136 | 176 | 293 | 4.85e-11 | 63.5 |
Msa0692140 | AT2G46780.1 | 39.535 | 86 | 48 | 1 | 56 | 137 | 22 | 107 | 5.96e-11 | 63.9 |
Msa0692140 | AT2G46780.2 | 39.535 | 86 | 48 | 1 | 56 | 137 | 22 | 107 | 5.96e-11 | 63.9 |
Find 147 sgRNAs with CRISPR-Local
Find 529 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAATTAACGTTTGACTATTT+TGG | 0.155771 | 4_4:+60495176 | None:intergenic |
CATCCATGTCATTGTCTAAA+AGG | 0.158584 | 4_4:+60495035 | None:intergenic |
TTCTCATCATCGCCGCCTTC+TGG | 0.178462 | 4_4:-60503126 | Msa0692140:CDS |
GAACAACTTCACCGAACTTT+TGG | 0.218023 | 4_4:+60501617 | None:intergenic |
GACCGGTGACGAAGAGAATT+TGG | 0.272558 | 4_4:+60497267 | None:intergenic |
CACTCACCTCCCCTCAGATT+TGG | 0.309179 | 4_4:+60495065 | None:intergenic |
GAGTTGATTGAAGTTGTTAT+TGG | 0.311563 | 4_4:-60499764 | Msa0692140:CDS |
AAAGTTCGGTGAAGTTAAAC+AGG | 0.321973 | 4_4:-60496389 | Msa0692140:CDS |
TCAGGTTACTCTAAGGGATT+TGG | 0.331272 | 4_4:-60496210 | Msa0692140:CDS |
TCAGGTTACTCTAAGGGATT+TGG | 0.331272 | 4_4:-60501448 | Msa0692140:CDS |
CGTAGGAGGCTGCCAAGTTA+TGG | 0.333019 | 4_4:+60499658 | None:intergenic |
GAGACTATAGCATTGGTTCT+TGG | 0.339313 | 4_4:+60495456 | None:intergenic |
TTCATTTCACCATTCTTCTC+TGG | 0.343480 | 4_4:+60495381 | None:intergenic |
TCGAGTCTCAGGTTACTCTA+AGG | 0.347313 | 4_4:-60501455 | Msa0692140:CDS |
TCGTGTCTCAGGTTACTCTA+AGG | 0.355649 | 4_4:-60496217 | Msa0692140:CDS |
CTGAAAAGTAAAACCCTTGA+TGG | 0.361594 | 4_4:+60503269 | None:intergenic |
GCTTCTCCGGGTGGTGGTCT+TGG | 0.365700 | 4_4:+60500492 | None:intergenic |
GGGATGGTTCAGTATGTGTC+TGG | 0.374916 | 4_4:+60495433 | None:intergenic |
CGGTGCCCCGCGGTTTCTGC+CGG | 0.374929 | 4_4:-60497388 | Msa0692140:CDS |
CGTATTATTTACAGCTTCTC+CGG | 0.378906 | 4_4:+60500479 | None:intergenic |
GAGAGCTGCAGCTGCGGCGG+CGG | 0.386601 | 4_4:-60503214 | Msa0692140:CDS |
TTATCCTAATCTTTGTCCAT+TGG | 0.396575 | 4_4:+60495291 | None:intergenic |
AAGTTCGGTGAAGTTGTTCA+TGG | 0.397028 | 4_4:-60501613 | Msa0692140:intron |
GAAAAGCCGGCAGAAACCGC+GGG | 0.416020 | 4_4:+60497382 | None:intergenic |
CTCAAGGACTGCTCCACGCT+TGG | 0.427313 | 4_4:-60499736 | Msa0692140:CDS |
CGAACCAATGGACAAAGATT+AGG | 0.427675 | 4_4:-60495295 | Msa0692140:exon |
GTAGGAGGCTGCCAAGTTAT+GGG | 0.430958 | 4_4:+60499659 | None:intergenic |
CTCTCTCCTTCAACCCATCA+AGG | 0.434680 | 4_4:-60503283 | Msa0692140:five_prime_UTR |
ATCCATGTCATTGTCTAAAA+GGG | 0.439890 | 4_4:+60495036 | None:intergenic |
AGCACCAACCTCTTCGTCTC+TGG | 0.450848 | 4_4:-60503069 | Msa0692140:intron |
CATAACTTGGCAGCCTCCTA+CGG | 0.453048 | 4_4:-60499657 | Msa0692140:CDS |
GATGCTGCTAGGGGCATTGA+AGG | 0.455789 | 4_4:-60501400 | Msa0692140:CDS |
AGAAAGTTTAAACATATTCA+AGG | 0.456216 | 4_4:+60495200 | None:intergenic |
AGTCAAACGTTAATTTGAGA+TGG | 0.463175 | 4_4:-60495169 | Msa0692140:three_prime_UTR |
GATGCAGCTAAGGGCATTCA+AGG | 0.474539 | 4_4:-60496162 | Msa0692140:CDS |
AAAGAGTCGGCAGAAACTGC+GGG | 0.478130 | 4_4:+60503188 | None:intergenic |
TAAAACCCTTGATGGGTTGA+AGG | 0.479055 | 4_4:+60503277 | None:intergenic |
AGAGCAGAAGTAGCTCTAGA+AGG | 0.482168 | 4_4:+60497308 | None:intergenic |
ATCAAGTTCAGCCCATAACT+TGG | 0.484698 | 4_4:-60499670 | Msa0692140:CDS |
TACTTTAGAAGATGCTGCTA+GGG | 0.485381 | 4_4:-60501410 | Msa0692140:CDS |
GAAGAATGGTGAAATGAAGA+AGG | 0.486280 | 4_4:-60495376 | Msa0692140:CDS |
AAGGCGGCGTTGAAGCGAAC+GGG | 0.486768 | 4_4:+60497327 | None:intergenic |
GGATGATATTGTTGCAATGC+AGG | 0.488806 | 4_4:-60495017 | Msa0692140:three_prime_UTR |
TACTTCAGAAGATGCAGCTA+AGG | 0.490832 | 4_4:-60496172 | Msa0692140:CDS |
GTGGTGGCAGATCGTGTCTC+AGG | 0.492116 | 4_4:-60496228 | Msa0692140:CDS |
AGGGAAGCATTCCAAAAGTT+CGG | 0.494589 | 4_4:-60501628 | Msa0692140:CDS |
GATGAGAGCTACAGCGGCAG+CGG | 0.497516 | 4_4:-60497408 | Msa0692140:intron |
ATCTGTCGAGCGGAAGGCGG+CGG | 0.498886 | 4_4:+60503102 | None:intergenic |
TTTACAGCTTCTCCGGGTGG+TGG | 0.499800 | 4_4:+60500486 | None:intergenic |
CGTCAAAGCAGCCATGGGAT+GGG | 0.502131 | 4_4:+60503239 | None:intergenic |
CTACTTTAGAAGATGCTGCT+AGG | 0.502306 | 4_4:-60501411 | Msa0692140:CDS |
TGCGAGCATGCTGCCAAGCG+TGG | 0.502352 | 4_4:+60499723 | None:intergenic |
TTGGCTTCGTGCAGAAAAGC+CGG | 0.502812 | 4_4:+60497369 | None:intergenic |
GTTGTTATTGGCCGTGCTCA+AGG | 0.505755 | 4_4:-60499752 | Msa0692140:CDS |
GTGGTAACAGATCGAGTCTC+AGG | 0.506975 | 4_4:-60501466 | Msa0692140:CDS |
GCCGCCTTCCGCTCGACAGA+TGG | 0.507477 | 4_4:-60503100 | Msa0692140:CDS |
ATCGGATAAAATAGTAAGCA+TGG | 0.508112 | 4_4:-60499597 | Msa0692140:CDS |
GATGAGAGCTGCAGCTGCGG+CGG | 0.510313 | 4_4:-60503217 | Msa0692140:CDS |
TCGTCAAAGCAGCCATGGGA+TGG | 0.510354 | 4_4:+60503238 | None:intergenic |
ATAACTTGGCAGCCTCCTAC+GGG | 0.512108 | 4_4:-60499656 | Msa0692140:CDS |
TGGAGAAGAAGCGGTTGGAT+TGG | 0.515749 | 4_4:+60503161 | None:intergenic |
GTGACGAAGAGAATTTGGTT+GGG | 0.517626 | 4_4:+60497272 | None:intergenic |
GATGAGAAAGAAGGGAAAGC+TGG | 0.519875 | 4_4:+60503141 | None:intergenic |
ACCTCGCTCGTCACGAACAC+AGG | 0.520908 | 4_4:+60499571 | None:intergenic |
AACCAAATTCTCTTCGTCAC+CGG | 0.521059 | 4_4:-60497269 | Msa0692140:intron |
TCTTCAGGTTCGGAGTGGGA+TGG | 0.524520 | 4_4:+60495417 | None:intergenic |
GTCAAACGTTAATTTGAGAT+GGG | 0.524787 | 4_4:-60495168 | Msa0692140:three_prime_UTR |
GGCGGCGATGATGAGAAAGA+AGG | 0.531889 | 4_4:+60503132 | None:intergenic |
TTGCCGCTGTACTTGTTCAC+AGG | 0.532094 | 4_4:+60499694 | None:intergenic |
GCCGATCTCAGCAAGGGTGG+TGG | 0.532889 | 4_4:-60496244 | Msa0692140:intron |
ACAGCGGCAGCGGTGCCCCG+CGG | 0.533814 | 4_4:-60497398 | Msa0692140:intron |
CGAGTCTCAGGTTACTCTAA+GGG | 0.537803 | 4_4:-60501454 | Msa0692140:CDS |
GGAAACTGCTGGCAAGAAGA+AGG | 0.538907 | 4_4:-60495355 | Msa0692140:CDS |
GGTGACGAAGAGAATTTGGT+TGG | 0.541116 | 4_4:+60497271 | None:intergenic |
CGTGTCTCAGGTTACTCTAA+GGG | 0.541129 | 4_4:-60496216 | Msa0692140:CDS |
GTCAAAGCAGCCATGGGATG+GGG | 0.541430 | 4_4:+60503240 | None:intergenic |
TCTCTCCTTCAACCCATCAA+GGG | 0.542328 | 4_4:-60503282 | Msa0692140:five_prime_UTR |
TGCTATTTAGCCAAATCTGA+GGG | 0.547908 | 4_4:-60495075 | Msa0692140:three_prime_UTR |
GAAGAGGTTGGTGCTAGGCT+CGG | 0.548156 | 4_4:+60503077 | None:intergenic |
GTATTATTTACAGCTTCTCC+GGG | 0.550728 | 4_4:+60500480 | None:intergenic |
TCTCATCGTCAAAGCAGCCA+TGG | 0.558291 | 4_4:+60503233 | None:intergenic |
GCGGAAGGCGGCGGTCCAGA+AGG | 0.560349 | 4_4:+60503111 | None:intergenic |
GAAGGCGGCGGTCCAGAAGG+CGG | 0.560594 | 4_4:+60503114 | None:intergenic |
TCGGCCATCTGTCGAGCGGA+AGG | 0.561453 | 4_4:+60503096 | None:intergenic |
GAAGGCGGCGTTGAAGCGAA+CGG | 0.562134 | 4_4:+60497326 | None:intergenic |
GACGATGAGAGCTGCAGCTG+CGG | 0.562915 | 4_4:-60503220 | Msa0692140:CDS |
TCAGCTTAAACCCCATCCCA+TGG | 0.564938 | 4_4:-60503250 | Msa0692140:exon |
GCCATCTGTCGAGCGGAAGG+CGG | 0.576022 | 4_4:+60503099 | None:intergenic |
CATTCAAGGCATGGATGGCA+AGG | 0.577087 | 4_4:-60496148 | Msa0692140:intron |
AAGGGCATTCAAGGCATGGA+TGG | 0.580521 | 4_4:-60496153 | Msa0692140:CDS |
TGCTAGGGGCATTGAAGGAA+TGG | 0.581040 | 4_4:-60501395 | Msa0692140:CDS |
CTCATCGTCAAAGCAGCCAT+GGG | 0.581556 | 4_4:+60503234 | None:intergenic |
TGAAAAGTAAAACCCTTGAT+GGG | 0.583024 | 4_4:+60503270 | None:intergenic |
GCGGCGATGATGAGAAAGAA+GGG | 0.588249 | 4_4:+60503133 | None:intergenic |
AGAAAAGCCGGCAGAAACCG+CGG | 0.588918 | 4_4:+60497381 | None:intergenic |
AAAACGACACCAGAGAAGAA+TGG | 0.590404 | 4_4:-60495390 | Msa0692140:CDS |
AAAGCTGGAGAAGAAGCGGT+TGG | 0.590957 | 4_4:+60503156 | None:intergenic |
AGCTAAGGGCATTCAAGGCA+TGG | 0.591683 | 4_4:-60496157 | Msa0692140:CDS |
GAGACGAAGAGGTTGGTGCT+AGG | 0.593582 | 4_4:+60503072 | None:intergenic |
CGAACCAGAGACGAAGAGGT+TGG | 0.593995 | 4_4:+60503065 | None:intergenic |
ACTTCAGAAGATGCAGCTAA+GGG | 0.597665 | 4_4:-60496171 | Msa0692140:CDS |
AGGGGCATTGAAGGAATGGA+TGG | 0.598515 | 4_4:-60501391 | Msa0692140:CDS |
AGCTACTTCTGCTCTAAAGA+CGG | 0.598572 | 4_4:-60497300 | Msa0692140:CDS |
ACCCGACCATCAACAACCCA+CGG | 0.598886 | 4_4:-60503372 | None:intergenic |
CACTTTACAAAACCCGTAGG+AGG | 0.600085 | 4_4:+60499644 | None:intergenic |
TGTAAAGTGCAATATTGATG+TGG | 0.600465 | 4_4:-60499630 | Msa0692140:CDS |
CGAGCTCTTGAAATCTCTAG+AGG | 0.600917 | 4_4:-60495225 | Msa0692140:three_prime_UTR |
GGTAGTTGCAGACGAACCAA+TGG | 0.606038 | 4_4:-60495307 | Msa0692140:CDS |
TTAGGATAAGAAGTAAGCTG+AGG | 0.606307 | 4_4:-60495277 | Msa0692140:exon |
GTTGAAGCGAACGGGACAGT+GGG | 0.608011 | 4_4:+60497335 | None:intergenic |
AGGGAAAGCTGGAGAAGAAG+CGG | 0.611069 | 4_4:+60503152 | None:intergenic |
TTGGATTGGTGCAAAAGAGT+CGG | 0.611688 | 4_4:+60503175 | None:intergenic |
TTTGCCGATCTCAGCAAGGG+TGG | 0.614124 | 4_4:-60496247 | Msa0692140:intron |
TCGGATAAAATAGTAAGCAT+GGG | 0.617219 | 4_4:-60499596 | Msa0692140:CDS |
TGTCTGGGAGACTATAGCAT+TGG | 0.618440 | 4_4:+60495449 | None:intergenic |
GCCTGTGTTCGTGACGAGCG+AGG | 0.619774 | 4_4:-60499572 | Msa0692140:intron |
AAAAGAGTCGGCAGAAACTG+CGG | 0.620147 | 4_4:+60503187 | None:intergenic |
CGTGGAGCAGTCCTTGAGCA+CGG | 0.620490 | 4_4:+60499741 | None:intergenic |
CGTTGAAGCGAACGGGACAG+TGG | 0.621721 | 4_4:+60497334 | None:intergenic |
CGGGACAGTGGGAGAAGACG+CGG | 0.622686 | 4_4:+60497346 | None:intergenic |
TTATTTACAGCTTCTCCGGG+TGG | 0.622983 | 4_4:+60500483 | None:intergenic |
CTGCTATTTAGCCAAATCTG+AGG | 0.634521 | 4_4:-60495076 | Msa0692140:three_prime_UTR |
CATTGAAGGAATGGATGGCA+AGG | 0.640049 | 4_4:-60501386 | Msa0692140:intron |
AAGGCGAACCAGAGACGAAG+AGG | 0.640180 | 4_4:+60503061 | None:intergenic |
ATATCTGAACTCGCCAAATG+CGG | 0.642153 | 4_4:+60503321 | None:intergenic |
GGATGGTTCAGTATGTGTCT+GGG | 0.646189 | 4_4:+60495434 | None:intergenic |
AAAAGCCGGCAGAAACCGCG+GGG | 0.647049 | 4_4:+60497383 | None:intergenic |
TTTGTCAATCTCAGCAAGGG+TGG | 0.647632 | 4_4:-60501485 | Msa0692140:intron |
TAAGGGAAAATAAACACCGT+GGG | 0.652471 | 4_4:+60503356 | None:intergenic |
ACAGTGGGAGAAGACGCGGT+TGG | 0.653547 | 4_4:+60497350 | None:intergenic |
GTACTACAACAGAGACGCTG+AGG | 0.653561 | 4_4:-60501648 | Msa0692140:CDS |
AGGCTCGGCCATCTGTCGAG+CGG | 0.658207 | 4_4:+60503092 | None:intergenic |
TTGCACTTTACAAAACCCGT+AGG | 0.662932 | 4_4:+60499641 | None:intergenic |
GTACTACATCAGAGACGCTG+AGG | 0.664662 | 4_4:-60496423 | Msa0692140:CDS |
GCAAGACCAAGACCACCACC+CGG | 0.665523 | 4_4:-60500498 | Msa0692140:CDS |
TACTACATCAGAGACGCTGA+GGG | 0.671573 | 4_4:-60496422 | Msa0692140:CDS |
ATTTAGCCAAATCTGAGGGG+AGG | 0.672336 | 4_4:-60495071 | Msa0692140:three_prime_UTR |
TACTTCTGCTCTAAAGACGG+CGG | 0.680130 | 4_4:-60497297 | Msa0692140:CDS |
GAAATGAAGAAGGAAACTGC+TGG | 0.681886 | 4_4:-60495366 | Msa0692140:CDS |
TACTACAACAGAGACGCTGA+GGG | 0.682055 | 4_4:-60501647 | Msa0692140:CDS |
ACTTTAGAAGATGCTGCTAG+GGG | 0.684689 | 4_4:-60501409 | Msa0692140:CDS |
GCAGAAGTAGCTCTAGAAGG+CGG | 0.685533 | 4_4:+60497311 | None:intergenic |
GCTATTTAGCCAAATCTGAG+GGG | 0.700677 | 4_4:-60495074 | Msa0692140:three_prime_UTR |
AAGTTCGGTGAAGTTAAACA+GGG | 0.706995 | 4_4:-60496388 | Msa0692140:intron |
AAGAGTCGGCAGAAACTGCG+GGG | 0.717765 | 4_4:+60503189 | None:intergenic |
TTAAGGGAAAATAAACACCG+TGG | 0.753350 | 4_4:+60503355 | None:intergenic |
ATTCCTGTGAACAAGTACAG+CGG | 0.754962 | 4_4:-60499697 | Msa0692140:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTATAATAATAATAATA+AGG | + | chr4_4:60495269-60495288 | None:intergenic | 0.0% |
!!! | AATTTATTTATTTTTATTTA+TGG | + | chr4_4:60496510-60496529 | None:intergenic | 0.0% |
!! | TATATTATATATATATTTAA+CGG | + | chr4_4:60500022-60500041 | None:intergenic | 0.0% |
!! | ATATATATATATATATTTAA+CGG | + | chr4_4:60500098-60500117 | None:intergenic | 0.0% |
!! | ATTATAATTATTATTGTTGT+TGG | - | chr4_4:60495279-60495298 | Msa0692140:exon | 10.0% |
!!! | TTTTTTATAATCCTTAAAAA+CGG | + | chr4_4:60495446-60495465 | None:intergenic | 10.0% |
!!! | AAATTTTTGTAGATAAATTA+AGG | + | chr4_4:60497950-60497969 | None:intergenic | 10.0% |
!!! | TTAATTTTTTTTTTTGTAGA+AGG | + | chr4_4:60499526-60499545 | None:intergenic | 10.0% |
!! | TAACTATAAAAATTCAAATT+TGG | + | chr4_4:60499591-60499610 | None:intergenic | 10.0% |
!! | TTTACGTTAAAATAAATAAT+TGG | - | chr4_4:60499718-60499737 | Msa0692140:CDS | 10.0% |
!! | ATAAAGGTAAAAAATATAAA+AGG | - | chr4_4:60499844-60499863 | Msa0692140:intron | 10.0% |
!! | TATTTAATGTTATTCAAAAT+TGG | + | chr4_4:60499879-60499898 | None:intergenic | 10.0% |
!!! | TAAGGAAATTTATTTATTTT+TGG | - | chr4_4:60500172-60500191 | Msa0692140:intron | 10.0% |
!!! | ATATGAATTAAATATGTTTT+TGG | - | chr4_4:60500456-60500475 | Msa0692140:intron | 10.0% |
!! | AAGAAAAATGTATAAATAAA+GGG | + | chr4_4:60500682-60500701 | None:intergenic | 10.0% |
!! | TAAGAAAAATGTATAAATAA+AGG | + | chr4_4:60500683-60500702 | None:intergenic | 10.0% |
!!! | TTTATTTTTATTTATGGCAT+GGG | + | chr4_4:60496504-60496523 | None:intergenic | 15.0% |
!!! | ATTTATTTTTATTTATGGCA+TGG | + | chr4_4:60496505-60496524 | None:intergenic | 15.0% |
!! | AGTATTATTTATTTAGTCAT+TGG | - | chr4_4:60497904-60497923 | Msa0692140:intron | 15.0% |
!!! | TATGTAAATCTGAAATTATT+TGG | + | chr4_4:60498143-60498162 | None:intergenic | 15.0% |
!! | AAAAAAAAAAGGATTATCTT+AGG | - | chr4_4:60499101-60499120 | Msa0692140:intron | 15.0% |
!!! | AAATTTATTTATTTTTGGTC+AGG | - | chr4_4:60500177-60500196 | Msa0692140:intron | 15.0% |
!! | ATTTAGTGTTATATTGTATT+GGG | + | chr4_4:60500617-60500636 | None:intergenic | 15.0% |
!! | TATTTAGTGTTATATTGTAT+TGG | + | chr4_4:60500618-60500637 | None:intergenic | 15.0% |
!! | AGAAAAATGTATAAATAAAG+GGG | + | chr4_4:60500681-60500700 | None:intergenic | 15.0% |
!! | TGTTTAAGCAATAAGTAAAT+AGG | + | chr4_4:60495650-60495669 | None:intergenic | 20.0% |
!! | TTTATCAATTTCATCATAGA+AGG | - | chr4_4:60495878-60495897 | Msa0692140:intron | 20.0% |
!!! | TTACAAAACCAATTTGTTAA+AGG | + | chr4_4:60495906-60495925 | None:intergenic | 20.0% |
!!! | ACAAATTGGTTTTGTAAATA+AGG | - | chr4_4:60495909-60495928 | Msa0692140:intron | 20.0% |
!!! | TTATTTTTATTTATGGCATG+GGG | + | chr4_4:60496503-60496522 | None:intergenic | 20.0% |
!! | AGTTTAAATGTTTAAAAGGA+TGG | + | chr4_4:60496709-60496728 | None:intergenic | 20.0% |
!! | GAACAGTTTAAATGTTTAAA+AGG | + | chr4_4:60496713-60496732 | None:intergenic | 20.0% |
!! | CAAAAAACATAAAACCATTA+TGG | + | chr4_4:60496787-60496806 | None:intergenic | 20.0% |
!! | TATTATAAAGACATACAATG+AGG | + | chr4_4:60497206-60497225 | None:intergenic | 20.0% |
!! | TAAATTAAGTTTATCTTAGG+TGG | + | chr4_4:60497248-60497267 | None:intergenic | 20.0% |
!!! | ACATTGTTATTGTATATGTA+TGG | - | chr4_4:60497621-60497640 | Msa0692140:intron | 20.0% |
!! | TGAACATAAATTAATAAGGT+CGG | + | chr4_4:60497837-60497856 | None:intergenic | 20.0% |
!! | CACTAATGTCAAAAAAATAA+AGG | + | chr4_4:60498104-60498123 | None:intergenic | 20.0% |
!!! | CTTTATTTTTTTGACATTAG+TGG | - | chr4_4:60498102-60498121 | Msa0692140:intron | 20.0% |
!! | TAGTAATTTGAGAGATATTA+AGG | + | chr4_4:60498438-60498457 | None:intergenic | 20.0% |
!!! | ATTTGAAATGGATTGTAAAA+TGG | - | chr4_4:60498867-60498886 | Msa0692140:intron | 20.0% |
!!! | TAATTTTAAACACTAGAAAC+TGG | + | chr4_4:60499382-60499401 | None:intergenic | 20.0% |
!! | CTATAAAAATTCAAATTTGG+AGG | + | chr4_4:60499588-60499607 | None:intergenic | 20.0% |
!! | TAGGTAACATAATCTATATA+TGG | + | chr4_4:60499782-60499801 | None:intergenic | 20.0% |
!! | ATATTCTTGTGAGAATATAA+AGG | - | chr4_4:60499828-60499847 | Msa0692140:intron | 20.0% |
!! | AAACGTTCGAATATTAATAT+AGG | + | chr4_4:60500483-60500502 | None:intergenic | 20.0% |
!!! | GACACTTTTTTTTAGAAAAT+AGG | + | chr4_4:60500548-60500567 | None:intergenic | 20.0% |
!! | AAAGTGGAATATATTGTATT+GGG | + | chr4_4:60500658-60500677 | None:intergenic | 20.0% |
!! | TTCACTTAATTAATTAACTC+TGG | + | chr4_4:60500770-60500789 | None:intergenic | 20.0% |
!! | TGTTAATGTAAACTGTAAAT+TGG | - | chr4_4:60501071-60501090 | Msa0692140:intron | 20.0% |
!! | TTTATGCAATTTGTAACAAA+AGG | + | chr4_4:60501208-60501227 | None:intergenic | 20.0% |
!!! | ATGATTTTTATGTTCAACAA+AGG | - | chr4_4:60501234-60501253 | Msa0692140:intron | 20.0% |
!! | TTATGAAAGACAAATTGAAT+TGG | + | chr4_4:60501791-60501810 | None:intergenic | 20.0% |
!! | TCATAATATTCATTTGATTG+TGG | - | chr4_4:60501805-60501824 | Msa0692140:intron | 20.0% |
!! | CATAATATTCATTTGATTGT+GGG | - | chr4_4:60501806-60501825 | Msa0692140:intron | 20.0% |
!! | CAAATGTTAAAATTTACCAA+GGG | + | chr4_4:60501938-60501957 | None:intergenic | 20.0% |
!! | TCAAATGTTAAAATTTACCA+AGG | + | chr4_4:60501939-60501958 | None:intergenic | 20.0% |
!! | AGAAAGTTTAAACATATTCA+AGG | + | chr4_4:60503091-60503110 | None:intergenic | 20.0% |
!!! | AAATTAACGTTTGACTATTT+TGG | + | chr4_4:60503115-60503134 | None:intergenic | 20.0% |
!! | TTAGTGTTTGATGAAAAATT+AGG | - | chr4_4:60503181-60503200 | Msa0692140:CDS | 20.0% |
!! | TAGTGTTTGATGAAAAATTA+GGG | - | chr4_4:60503182-60503201 | Msa0692140:CDS | 20.0% |
! | TAATAAGGAAAAGTTGAGAA+GGG | + | chr4_4:60495254-60495273 | None:intergenic | 25.0% |
! | ATAATAAGGAAAAGTTGAGA+AGG | + | chr4_4:60495255-60495274 | None:intergenic | 25.0% |
! | TTTATGTTCTCATTTGATCT+TGG | - | chr4_4:60495404-60495423 | Msa0692140:CDS | 25.0% |
!! | ATAAATTTCTTTTCCCTTTG+TGG | - | chr4_4:60495718-60495737 | Msa0692140:intron | 25.0% |
! | TACTAATATCAAACCACAAA+GGG | + | chr4_4:60495734-60495753 | None:intergenic | 25.0% |
! | TTACTAATATCAAACCACAA+AGG | + | chr4_4:60495735-60495754 | None:intergenic | 25.0% |
! | AGAAAATATACTGTATGAGT+TGG | - | chr4_4:60495957-60495976 | Msa0692140:intron | 25.0% |
! | ACGATATAAGTAGAAATAAG+AGG | - | chr4_4:60496019-60496038 | Msa0692140:intron | 25.0% |
! | CGATATAAGTAGAAATAAGA+GGG | - | chr4_4:60496020-60496039 | Msa0692140:intron | 25.0% |
! | GATATAAGTAGAAATAAGAG+GGG | - | chr4_4:60496021-60496040 | Msa0692140:intron | 25.0% |
!! | TCAAAGAAATATGTTTCTGT+TGG | + | chr4_4:60496229-60496248 | None:intergenic | 25.0% |
! | AATTAAGAGAATTGAATCCT+GGG | + | chr4_4:60496418-60496437 | None:intergenic | 25.0% |
! | AAATTAAGAGAATTGAATCC+TGG | + | chr4_4:60496419-60496438 | None:intergenic | 25.0% |
! | AAAATTGCAAATGACAATTG+AGG | + | chr4_4:60496469-60496488 | None:intergenic | 25.0% |
!! | ACATAAAACCATTATGGTTT+TGG | + | chr4_4:60496781-60496800 | None:intergenic | 25.0% |
! | GTAAGATTTATTAAACCCTT+TGG | - | chr4_4:60496924-60496943 | Msa0692140:intron | 25.0% |
! | CGGTAAATTAAGTTTATCTT+AGG | + | chr4_4:60497251-60497270 | None:intergenic | 25.0% |
! | TCTTAAAGCACAAATTTGTA+TGG | - | chr4_4:60497346-60497365 | Msa0692140:CDS | 25.0% |
! | TACTCTAAATATTGAAGAGT+TGG | + | chr4_4:60497468-60497487 | None:intergenic | 25.0% |
! | AATACATGATTTACAGATTC+GGG | + | chr4_4:60497504-60497523 | None:intergenic | 25.0% |
! | CAATACATGATTTACAGATT+CGG | + | chr4_4:60497505-60497524 | None:intergenic | 25.0% |
! | CAATATTTGAATAGGAAGTT+TGG | + | chr4_4:60497707-60497726 | None:intergenic | 25.0% |
! | TCAGTAAGCAATATTTGAAT+AGG | + | chr4_4:60497715-60497734 | None:intergenic | 25.0% |
! | CGGATGAACATAAATTAATA+AGG | + | chr4_4:60497841-60497860 | None:intergenic | 25.0% |
! | TTGCAAATTCAAACATAATG+AGG | + | chr4_4:60497877-60497896 | None:intergenic | 25.0% |
! | TATTTATTTAGTCATTGGCA+TGG | - | chr4_4:60497909-60497928 | Msa0692140:intron | 25.0% |
!!! | TTGAATGGTAAGTTTTATCA+TGG | + | chr4_4:60498186-60498205 | None:intergenic | 25.0% |
!!! | TCAGAAGGTATTATTTGAAA+TGG | - | chr4_4:60498855-60498874 | Msa0692140:intron | 25.0% |
! | GAAACAATATGTATAGTGAA+AGG | - | chr4_4:60499614-60499633 | Msa0692140:CDS | 25.0% |
!!! | TTTTGTTTTGAGAGATTGAA+AGG | - | chr4_4:60499647-60499666 | Msa0692140:CDS | 25.0% |
!!! | TAAATAATTGGTTTTGTCCA+AGG | - | chr4_4:60499730-60499749 | Msa0692140:CDS | 25.0% |
! | ACATTCATCTTAGTCTATTT+AGG | + | chr4_4:60499801-60499820 | None:intergenic | 25.0% |
! | TACCTGACCAAAAATAAATA+AGG | + | chr4_4:60500182-60500201 | None:intergenic | 25.0% |
! | ACCTTATAAAGTGAATAAGT+GGG | - | chr4_4:60500288-60500307 | Msa0692140:intron | 25.0% |
! | ACAATGCATTATTATATGCA+GGG | + | chr4_4:60500337-60500356 | None:intergenic | 25.0% |
!!! | AATATTCGAACGTTTTGTTA+AGG | - | chr4_4:60500488-60500507 | Msa0692140:intron | 25.0% |
!!! | TGAAATGAGTCAGTTATTTT+GGG | + | chr4_4:60500570-60500589 | None:intergenic | 25.0% |
!! | TTGAAATGAGTCAGTTATTT+TGG | + | chr4_4:60500571-60500590 | None:intergenic | 25.0% |
! | GAAAGTGGAATATATTGTAT+TGG | + | chr4_4:60500659-60500678 | None:intergenic | 25.0% |
!!! | GTTCTCATTTGATTTGATTT+AGG | - | chr4_4:60501166-60501185 | Msa0692140:intron | 25.0% |
!!! | ACTGATTTGAGTTTATTACT+TGG | - | chr4_4:60501287-60501306 | Msa0692140:intron | 25.0% |
!! | CTCTTTTCTTTTTCTTATCA+TGG | + | chr4_4:60501367-60501386 | None:intergenic | 25.0% |
!! | TGTTAGTATTTTTCTCTTGT+CGG | + | chr4_4:60501490-60501509 | None:intergenic | 25.0% |
! | TGTTTAAAGAGGGAAATTAA+GGG | + | chr4_4:60501667-60501686 | None:intergenic | 25.0% |
!!! | TTCATTTTTATTTATGGCAG+GGG | + | chr4_4:60501735-60501754 | None:intergenic | 25.0% |
!!! | CTTCATTTTTATTTATGGCA+GGG | + | chr4_4:60501736-60501755 | None:intergenic | 25.0% |
!!! | GACAGCTTCATTTTTATTTA+TGG | + | chr4_4:60501741-60501760 | None:intergenic | 25.0% |
! | TTAAATGTGTCATAACTTTC+AGG | - | chr4_4:60501831-60501850 | Msa0692140:intron | 25.0% |
! | TAAATGTGTCATAACTTTCA+GGG | - | chr4_4:60501832-60501851 | Msa0692140:intron | 25.0% |
! | AATCATAGCTGAAACTATAA+TGG | - | chr4_4:60502011-60502030 | Msa0692140:intron | 25.0% |
! | TAAACAAAGTTTATCTTAGG+TGG | + | chr4_4:60502296-60502315 | None:intergenic | 25.0% |
!! | TTCTAAAAACTACATTGCAA+AGG | + | chr4_4:60502782-60502801 | None:intergenic | 25.0% |
!!! | TTTGCAATGTAGTTTTTAGA+AGG | - | chr4_4:60502781-60502800 | Msa0692140:intron | 25.0% |
!!! | TGTCTATCTTTTAAGATTCA+AGG | - | chr4_4:60503154-60503173 | Msa0692140:CDS | 25.0% |
!!! | GTCTATCTTTTAAGATTCAA+GGG | - | chr4_4:60503155-60503174 | Msa0692140:CDS | 25.0% |
!!! | TGCGGTTTTTTTGTACTTAA+GGG | + | chr4_4:60494952-60494971 | None:intergenic | 30.0% |
!!! | ATGCGGTTTTTTTGTACTTA+AGG | + | chr4_4:60494953-60494972 | None:intergenic | 30.0% |
AAGTACAAAAAAACCGCATT+TGG | - | chr4_4:60494954-60494973 | Msa0692140:three_prime_UTR | 30.0% | |
TGAAAAGTAAAACCCTTGAT+GGG | + | chr4_4:60495021-60495040 | None:intergenic | 30.0% | |
!! | TTATGTTTTTGACCATGTTG+AGG | - | chr4_4:60495369-60495388 | Msa0692140:CDS | 30.0% |
GGGAAAAGAAATTTATACAC+AGG | + | chr4_4:60495714-60495733 | None:intergenic | 30.0% | |
AAGGATCATTTCATAATCCT+CGG | - | chr4_4:60496142-60496161 | Msa0692140:intron | 30.0% | |
! | ATGCAATTTAGAGCAAGTAT+GGG | + | chr4_4:60496330-60496349 | None:intergenic | 30.0% |
CTTTAATACACTTAATTCCC+AGG | - | chr4_4:60496398-60496417 | Msa0692140:CDS | 30.0% | |
AATCTACTCCAAAACCATAA+TGG | - | chr4_4:60496770-60496789 | Msa0692140:intron | 30.0% | |
!!! | TTTTTTGTCAATCTCAGCAA+GGG | - | chr4_4:60496800-60496819 | Msa0692140:intron | 30.0% |
! | AGACTTAAGTGTATTTCTGT+CGG | - | chr4_4:60496969-60496988 | Msa0692140:intron | 30.0% |
! | TTGTTATCTTGGATCTGTTT+TGG | - | chr4_4:60496996-60497015 | Msa0692140:intron | 30.0% |
AAGAACAGTGAATACATTGT+TGG | + | chr4_4:60497330-60497349 | None:intergenic | 30.0% | |
TCATTAAATTTGATGTCAGG+AGG | + | chr4_4:60497444-60497463 | None:intergenic | 30.0% | |
GGATCATTAAATTTGATGTC+AGG | + | chr4_4:60497447-60497466 | None:intergenic | 30.0% | |
ATACATGATTTACAGATTCG+GGG | + | chr4_4:60497503-60497522 | None:intergenic | 30.0% | |
! | ATGTTCATCCGAAACATTTT+TGG | - | chr4_4:60497850-60497869 | Msa0692140:intron | 30.0% |
! | TGTTCATCCGAAACATTTTT+GGG | - | chr4_4:60497851-60497870 | Msa0692140:intron | 30.0% |
! | TAGATAAATTAAGGCTAGCT+AGG | + | chr4_4:60497941-60497960 | None:intergenic | 30.0% |
AAAAATTTGCCCGTTGAAAT+GGG | - | chr4_4:60497962-60497981 | Msa0692140:intron | 30.0% | |
ATATTTCTCTTTGATATGCC+TGG | - | chr4_4:60498017-60498036 | Msa0692140:intron | 30.0% | |
TTACAAAACTCACTGTTGAA+TGG | + | chr4_4:60498201-60498220 | None:intergenic | 30.0% | |
ATCACAAAAAACACAGATGA+AGG | + | chr4_4:60498305-60498324 | None:intergenic | 30.0% | |
AACTCCATTATGAAAGTCAT+AGG | - | chr4_4:60498386-60498405 | Msa0692140:intron | 30.0% | |
ATAGCCTATGACTTTCATAA+TGG | + | chr4_4:60498393-60498412 | None:intergenic | 30.0% | |
AGATATTAAGGTAATCCCTT+TGG | + | chr4_4:60498426-60498445 | None:intergenic | 30.0% | |
AAAGAGAAACTTACAGCTTT+AGG | - | chr4_4:60498490-60498509 | Msa0692140:intron | 30.0% | |
! | GAGTTGATTGAAGTTGTTAT+TGG | - | chr4_4:60498524-60498543 | Msa0692140:intron | 30.0% |
TGTAAAGTGCAATATTGATG+TGG | - | chr4_4:60498658-60498677 | Msa0692140:intron | 30.0% | |
ATCGGATAAAATAGTAAGCA+TGG | - | chr4_4:60498691-60498710 | Msa0692140:intron | 30.0% | |
TCGGATAAAATAGTAAGCAT+GGG | - | chr4_4:60498692-60498711 | Msa0692140:intron | 30.0% | |
!! | GGCATTTTAATAAGATGACA+TGG | + | chr4_4:60498764-60498783 | None:intergenic | 30.0% |
AAACAATCCATTGAATACCT+TGG | + | chr4_4:60498825-60498844 | None:intergenic | 30.0% | |
!! | AATGGATTGTAAAATGGTTG+TGG | - | chr4_4:60498873-60498892 | Msa0692140:intron | 30.0% |
GTAACAAGAATTACTCAGAA+TGG | + | chr4_4:60498924-60498943 | None:intergenic | 30.0% | |
TTGCTTGCGTCAAAAAAAAA+AGG | - | chr4_4:60499090-60499109 | Msa0692140:intron | 30.0% | |
CAAATGAACATTGTATACCT+TGG | + | chr4_4:60499750-60499769 | None:intergenic | 30.0% | |
!!! | CAGGTAGCCTTATTTATTTT+TGG | - | chr4_4:60500196-60500215 | Msa0692140:intron | 30.0% |
!!! | AGCCTTATTTATTTTTGGTC+AGG | - | chr4_4:60500201-60500220 | Msa0692140:intron | 30.0% |
ATCCACCTTAGATTTCATTA+TGG | - | chr4_4:60500240-60500259 | Msa0692140:intron | 30.0% | |
CACCTTATAAAGTGAATAAG+TGG | - | chr4_4:60500287-60500306 | Msa0692140:intron | 30.0% | |
CCTTATAAAGTGAATAAGTG+GGG | - | chr4_4:60500289-60500308 | Msa0692140:intron | 30.0% | |
CAATGCATTATTATATGCAG+GGG | + | chr4_4:60500336-60500355 | None:intergenic | 30.0% | |
CACAATGCATTATTATATGC+AGG | + | chr4_4:60500338-60500357 | None:intergenic | 30.0% | |
TGTATAAATAAAGGGGAAAG+TGG | + | chr4_4:60500674-60500693 | None:intergenic | 30.0% | |
CCAAAGTAAGTCAATTAAAC+CGG | - | chr4_4:60500717-60500736 | Msa0692140:intron | 30.0% | |
CAAAGTAAGTCAATTAAACC+GGG | - | chr4_4:60500718-60500737 | Msa0692140:intron | 30.0% | |
AAGCTAAAATGTAAAACCCT+GGG | + | chr4_4:60500840-60500859 | None:intergenic | 30.0% | |
TAAGCTAAAATGTAAAACCC+TGG | + | chr4_4:60500841-60500860 | None:intergenic | 30.0% | |
!!! | ATTTTAGCTTAAACCCATAG+TGG | - | chr4_4:60500850-60500869 | Msa0692140:intron | 30.0% |
AGTAATAAGCAATTACTGAC+CGG | + | chr4_4:60501041-60501060 | None:intergenic | 30.0% | |
!!! | TCGTATTTCATGTTTTGATC+AGG | - | chr4_4:60501117-60501136 | Msa0692140:intron | 30.0% |
!! | TGATTTAGGTTGTCTTGTTA+CGG | - | chr4_4:60501180-60501199 | Msa0692140:intron | 30.0% |
TTTCTTATCATGGCAAATGT+TGG | + | chr4_4:60501357-60501376 | None:intergenic | 30.0% | |
TAGTAATCTCTCAAACGATT+TGG | - | chr4_4:60501391-60501410 | Msa0692140:CDS | 30.0% | |
AGTAATCTCTCAAACGATTT+GGG | - | chr4_4:60501392-60501411 | Msa0692140:CDS | 30.0% | |
! | GTTAGTATTTTTCTCTTGTC+GGG | + | chr4_4:60501489-60501508 | None:intergenic | 30.0% |
GTTTAAAGAGGGAAATTAAG+GGG | + | chr4_4:60501666-60501685 | None:intergenic | 30.0% | |
GTGTTTAAAGAGGGAAATTA+AGG | + | chr4_4:60501668-60501687 | None:intergenic | 30.0% | |
ATGAATGGTGTGTTTAAAGA+GGG | + | chr4_4:60501677-60501696 | None:intergenic | 30.0% | |
AATGACAGTTGTAACATGAA+TGG | + | chr4_4:60501692-60501711 | None:intergenic | 30.0% | |
!! | GCTTCATTTTTATTTATGGC+AGG | + | chr4_4:60501737-60501756 | None:intergenic | 30.0% |
!! | AGGGAAGCATTTAAAAAGTT+CGG | - | chr4_4:60501885-60501904 | Msa0692140:intron | 30.0% |
CGGTAAACAAAGTTTATCTT+AGG | + | chr4_4:60502299-60502318 | None:intergenic | 30.0% | |
AAGAATAGTGAATGCATTGT+TGG | + | chr4_4:60502378-60502397 | None:intergenic | 30.0% | |
TCTTAAAGCACGAATTTGTA+TGG | - | chr4_4:60502394-60502413 | Msa0692140:intron | 30.0% | |
AGATCATTGAATTTCATGTC+AGG | + | chr4_4:60502495-60502514 | None:intergenic | 30.0% | |
ATGCATGATTTACAGATTCA+GGG | + | chr4_4:60502551-60502570 | None:intergenic | 30.0% | |
AATGCATGATTTACAGATTC+AGG | + | chr4_4:60502552-60502571 | None:intergenic | 30.0% | |
CAAAACACACAATTACATTC+CGG | + | chr4_4:60502617-60502636 | None:intergenic | 30.0% | |
! | ACATTGTTGTTGTTAATGTC+TGG | - | chr4_4:60502656-60502675 | Msa0692140:intron | 30.0% |
TCAGTCAGCAATAATTGAAT+AGG | + | chr4_4:60502751-60502770 | None:intergenic | 30.0% | |
GAAAAAGAAGATAACTGCAA+AGG | - | chr4_4:60502960-60502979 | Msa0692140:intron | 30.0% | |
TTATCCTAATCTTTGTCCAT+TGG | + | chr4_4:60503000-60503019 | None:intergenic | 30.0% | |
! | AGTCAAACGTTAATTTGAGA+TGG | - | chr4_4:60503119-60503138 | Msa0692140:CDS | 30.0% |
! | GTCAAACGTTAATTTGAGAT+GGG | - | chr4_4:60503120-60503139 | Msa0692140:CDS | 30.0% |
!!! | TATCTTTTAAGATTCAAGGG+TGG | - | chr4_4:60503158-60503177 | Msa0692140:CDS | 30.0% |
ATCCATGTCATTGTCTAAAA+GGG | + | chr4_4:60503255-60503274 | None:intergenic | 30.0% | |
! | GATATGTCTTGAACATTTTG+TGG | - | chr4_4:60503304-60503323 | Msa0692140:five_prime_UTR | 30.0% |
TAAGGGAAAATAAACACCGT+GGG | + | chr4_4:60494935-60494954 | None:intergenic | 35.0% | |
TTAAGGGAAAATAAACACCG+TGG | + | chr4_4:60494936-60494955 | None:intergenic | 35.0% | |
CTGAAAAGTAAAACCCTTGA+TGG | + | chr4_4:60495022-60495041 | None:intergenic | 35.0% | |
CATCATATGAAACCTCAACA+TGG | + | chr4_4:60495384-60495403 | None:intergenic | 35.0% | |
CTCATTTGATCTTGGTTGTT+TGG | - | chr4_4:60495412-60495431 | Msa0692140:CDS | 35.0% | |
TGATCTTGGTTGTTTGGTTA+TGG | - | chr4_4:60495418-60495437 | Msa0692140:CDS | 35.0% | |
!! | TGGTTATGGATCCGTTTTTA+AGG | - | chr4_4:60495432-60495451 | Msa0692140:CDS | 35.0% |
TAAATCTATCTCACTCTCAC+GGG | + | chr4_4:60495821-60495840 | None:intergenic | 35.0% | |
GTAAATCTATCTCACTCTCA+CGG | + | chr4_4:60495822-60495841 | None:intergenic | 35.0% | |
AGAAGGAGCCTTTAACAAAT+TGG | - | chr4_4:60495895-60495914 | Msa0692140:intron | 35.0% | |
GACACAGTCAAGAACTTAAA+AGG | + | chr4_4:60496054-60496073 | None:intergenic | 35.0% | |
!! | CTAGAGAAAGCATCTAAGAA+AGG | - | chr4_4:60496123-60496142 | Msa0692140:intron | 35.0% |
! | CATGCAATTTAGAGCAAGTA+TGG | + | chr4_4:60496331-60496350 | None:intergenic | 35.0% |
! | CATACTTGCTCTAAATTGCA+TGG | - | chr4_4:60496329-60496348 | Msa0692140:intron | 35.0% |
! | AATGACAATTGAGGCATCAA+TGG | + | chr4_4:60496460-60496479 | None:intergenic | 35.0% |
TTTATTTATGGCATGGGGAA+GGG | + | chr4_4:60496498-60496517 | None:intergenic | 35.0% | |
!! | TTTTATTTATGGCATGGGGA+AGG | + | chr4_4:60496499-60496518 | None:intergenic | 35.0% |
TTGACGTGTCTTAAACTTTC+AGG | - | chr4_4:60496606-60496625 | Msa0692140:intron | 35.0% | |
TGACGTGTCTTAAACTTTCA+GGG | - | chr4_4:60496607-60496626 | Msa0692140:intron | 35.0% | |
!!! | GTTTTTTGTCAATCTCAGCA+AGG | - | chr4_4:60496799-60496818 | Msa0692140:intron | 35.0% |
! | TACTTTAGAAGATGCTGCTA+GGG | - | chr4_4:60496878-60496897 | Msa0692140:intron | 35.0% |
CACTTAAGTCTTCTCGTATA+AGG | + | chr4_4:60496960-60496979 | None:intergenic | 35.0% | |
AAATTTGATGTCAGGAGGAA+GGG | + | chr4_4:60497439-60497458 | None:intergenic | 35.0% | |
TAAATTTGATGTCAGGAGGA+AGG | + | chr4_4:60497440-60497459 | None:intergenic | 35.0% | |
ATGCAACTGACAACAAAACT+CGG | + | chr4_4:60497578-60497597 | None:intergenic | 35.0% | |
! | TTCCCTTGCAATACAGTTTT+TGG | - | chr4_4:60497741-60497760 | Msa0692140:intron | 35.0% |
CTCCAAAAACTGTATTGCAA+GGG | + | chr4_4:60497746-60497765 | None:intergenic | 35.0% | |
!! | CTTGCAATACAGTTTTTGGA+GGG | - | chr4_4:60497745-60497764 | Msa0692140:intron | 35.0% |
GTATTATTTACAGCTTCTCC+GGG | + | chr4_4:60497811-60497830 | None:intergenic | 35.0% | |
CGTATTATTTACAGCTTCTC+CGG | + | chr4_4:60497812-60497831 | None:intergenic | 35.0% | |
CGGAGAAGCTGTAAATAATA+CGG | - | chr4_4:60497810-60497829 | Msa0692140:intron | 35.0% | |
GGAGAAGCTGTAAATAATAC+GGG | - | chr4_4:60497811-60497830 | Msa0692140:intron | 35.0% | |
AATGAGGCCCAAAAATGTTT+CGG | + | chr4_4:60497861-60497880 | None:intergenic | 35.0% | |
CAAAAATTTGCCCGTTGAAA+TGG | - | chr4_4:60497961-60497980 | Msa0692140:intron | 35.0% | |
AGATTATCCTCCCATTTCAA+CGG | + | chr4_4:60497975-60497994 | None:intergenic | 35.0% | |
GCAGTAACCATTACCAATAA+AGG | + | chr4_4:60498045-60498064 | None:intergenic | 35.0% | |
TGTGATAAAAAGTTACCGAG+TGG | - | chr4_4:60498234-60498253 | Msa0692140:intron | 35.0% | |
TTCAGTAATACTGTACCACT+CGG | + | chr4_4:60498252-60498271 | None:intergenic | 35.0% | |
AAAACACAGATGAAGGAGAA+TGG | + | chr4_4:60498298-60498317 | None:intergenic | 35.0% | |
GTTGTAAAAAAGAATGCAGC+CGG | + | chr4_4:60498369-60498388 | None:intergenic | 35.0% | |
GCTATTCTCTTCTTTCCAAA+GGG | - | chr4_4:60498408-60498427 | Msa0692140:intron | 35.0% | |
! | TGATGTGGCAATTTTTGCAT+CGG | - | chr4_4:60498673-60498692 | Msa0692140:intron | 35.0% |
AATAAGATGACATGGTCACA+TGG | + | chr4_4:60498756-60498775 | None:intergenic | 35.0% | |
CAAGAATTACTCAGAATGGT+TGG | + | chr4_4:60498920-60498939 | None:intergenic | 35.0% | |
!!! | ACTGCTTAGTTGTTTTTGCT+AGG | - | chr4_4:60498945-60498964 | Msa0692140:intron | 35.0% |
TTCATAATAGCGTCTTCAGT+GGG | + | chr4_4:60499150-60499169 | None:intergenic | 35.0% | |
!! | CGTGTCGATTATTTCTTATG+AGG | - | chr4_4:60499965-60499984 | Msa0692140:intron | 35.0% |
GACCATAATGAAATCTAAGG+TGG | + | chr4_4:60500245-60500264 | None:intergenic | 35.0% | |
CCTGACCATAATGAAATCTA+AGG | + | chr4_4:60500248-60500267 | None:intergenic | 35.0% | |
CCTTAGATTTCATTATGGTC+AGG | - | chr4_4:60500245-60500264 | Msa0692140:intron | 35.0% | |
TAAGGTGAATTCTAACCACT+AGG | + | chr4_4:60500274-60500293 | None:intergenic | 35.0% | |
CCCCACTTATTCACTTTATA+AGG | + | chr4_4:60500292-60500311 | None:intergenic | 35.0% | |
! | CCGGTTTAATTGACTTACTT+TGG | + | chr4_4:60500720-60500739 | None:intergenic | 35.0% |
!!! | ATGTTTTGATCAGGTTGTTG+AGG | - | chr4_4:60501126-60501145 | Msa0692140:intron | 35.0% |
!! | GATTTAGGTTGTCTTGTTAC+GGG | - | chr4_4:60501181-60501200 | Msa0692140:intron | 35.0% |
AAAGGATCATTTCTTCTTCG+AGG | - | chr4_4:60501252-60501271 | Msa0692140:intron | 35.0% | |
GTAATCTCTCAAACGATTTG+GGG | - | chr4_4:60501393-60501412 | Msa0692140:CDS | 35.0% | |
! | TAATCTCTCAAACGATTTGG+GGG | - | chr4_4:60501394-60501413 | Msa0692140:CDS | 35.0% |
CTAAGGGATTAAAGAAGTCA+AGG | - | chr4_4:60501440-60501459 | Msa0692140:CDS | 35.0% | |
!! | ACAACTCACTCTAGTCTTTT+GGG | + | chr4_4:60501559-60501578 | None:intergenic | 35.0% |
GGTTGAGATCAAAATAGCTA+GGG | + | chr4_4:60501607-60501626 | None:intergenic | 35.0% | |
CATGAATGGTGTGTTTAAAG+AGG | + | chr4_4:60501678-60501697 | None:intergenic | 35.0% | |
! | AGCTGTCTATTGCATTGATA+AGG | - | chr4_4:60501754-60501773 | Msa0692140:intron | 35.0% |
! | AAAGTTCGGTGAAGTTAAAC+AGG | - | chr4_4:60501899-60501918 | Msa0692140:intron | 35.0% |
! | AAGTTCGGTGAAGTTAAACA+GGG | - | chr4_4:60501900-60501919 | Msa0692140:intron | 35.0% |
TAAATAGCTGAACGAGTGAA+TGG | + | chr4_4:60501963-60501982 | None:intergenic | 35.0% | |
CAGTATTGTATTACATGTGC+AGG | + | chr4_4:60502192-60502211 | None:intergenic | 35.0% | |
CTGTCAGAATATTGTTGTCT+TGG | - | chr4_4:60502222-60502241 | Msa0692140:intron | 35.0% | |
TTTACTGCAAACTCGAATAG+AGG | + | chr4_4:60502421-60502440 | None:intergenic | 35.0% | |
TCATTGAATTTCATGTCAGG+AGG | + | chr4_4:60502492-60502511 | None:intergenic | 35.0% | |
! | GCATCTTTTTACATGACAAC+CGG | - | chr4_4:60502595-60502614 | Msa0692140:intron | 35.0% |
AGAAAAGCAAAGAACAACCA+TGG | + | chr4_4:60502718-60502737 | None:intergenic | 35.0% | |
!! | CAATGTAGTTTTTAGAAGGC+TGG | - | chr4_4:60502785-60502804 | Msa0692140:intron | 35.0% |
!! | CGTTTTCTTTTCTTCAGGTT+CGG | + | chr4_4:60502884-60502903 | None:intergenic | 35.0% |
TTCATTTCACCATTCTTCTC+TGG | + | chr4_4:60502910-60502929 | None:intergenic | 35.0% | |
GAAGAATGGTGAAATGAAGA+AGG | - | chr4_4:60502912-60502931 | Msa0692140:intron | 35.0% | |
TTAGGATAAGAAGTAAGCTG+AGG | - | chr4_4:60503011-60503030 | Msa0692140:intron | 35.0% | |
! | TGCTATTTAGCCAAATCTGA+GGG | - | chr4_4:60503213-60503232 | Msa0692140:CDS | 35.0% |
! | TTCCCTTTTAGACAATGACA+TGG | - | chr4_4:60503250-60503269 | Msa0692140:exon | 35.0% |
CATCCATGTCATTGTCTAAA+AGG | + | chr4_4:60503256-60503275 | None:intergenic | 35.0% | |
ATATCTGAACTCGCCAAATG+CGG | + | chr4_4:60494970-60494989 | None:intergenic | 40.0% | |
!! | TAAAACCCTTGATGGGTTGA+AGG | + | chr4_4:60495014-60495033 | None:intergenic | 40.0% |
!! | TTGGATTGGTGCAAAAGAGT+CGG | + | chr4_4:60495116-60495135 | None:intergenic | 40.0% |
AGGAAAAGTTGAGAAGGGAA+AGG | + | chr4_4:60495249-60495268 | None:intergenic | 40.0% | |
TCTCACGGGTAGTAAAACTA+AGG | + | chr4_4:60495807-60495826 | None:intergenic | 40.0% | |
CTCAAAAGAGACCTACAGTA+CGG | - | chr4_4:60496202-60496221 | Msa0692140:CDS | 40.0% | |
!! | GTTTTCGCTTTTGAGCCAAA+CGG | + | chr4_4:60496379-60496398 | None:intergenic | 40.0% |
! | CAATGGCATGTTGTTTAGAG+AGG | + | chr4_4:60496443-60496462 | None:intergenic | 40.0% |
!! | AGGGAAGCATTCCAAAAGTT+CGG | - | chr4_4:60496660-60496679 | Msa0692140:intron | 40.0% |
! | GAACAACTTCACCGAACTTT+TGG | + | chr4_4:60496674-60496693 | None:intergenic | 40.0% |
! | AAGTTCGGTGAAGTTGTTCA+TGG | - | chr4_4:60496675-60496694 | Msa0692140:intron | 40.0% |
! | TCAGGTTACTCTAAGGGATT+TGG | - | chr4_4:60496840-60496859 | Msa0692140:intron | 40.0% |
! | CTACTTTAGAAGATGCTGCT+AGG | - | chr4_4:60496877-60496896 | Msa0692140:intron | 40.0% |
! | ACTTTAGAAGATGCTGCTAG+GGG | - | chr4_4:60496879-60496898 | Msa0692140:intron | 40.0% |
CTGTCGGAACATTGTTATCT+TGG | - | chr4_4:60496985-60497004 | Msa0692140:intron | 40.0% | |
ATTTCACTTGTGTGTCATCG+TGG | - | chr4_4:60497030-60497049 | Msa0692140:intron | 40.0% | |
ACAATGTGACACACGGATTT+CGG | - | chr4_4:60497081-60497100 | Msa0692140:intron | 40.0% | |
! | ATTTCGGTCTTGTGAAAGAG+AGG | - | chr4_4:60497097-60497116 | Msa0692140:intron | 40.0% |
! | TTTCGGTCTTGTGAAAGAGA+GGG | - | chr4_4:60497098-60497117 | Msa0692140:intron | 40.0% |
AACACTTGTGTGTCACATTG+TGG | - | chr4_4:60497131-60497150 | Msa0692140:intron | 40.0% | |
AGTGTGATGTGTATATGCTG+CGG | + | chr4_4:60497277-60497296 | None:intergenic | 40.0% | |
TTTACTGCAAACTCGAGTAG+AGG | + | chr4_4:60497373-60497392 | None:intergenic | 40.0% | |
AATTTGATGTCAGGAGGAAG+GGG | + | chr4_4:60497438-60497457 | None:intergenic | 40.0% | |
CCTCCAAAAACTGTATTGCA+AGG | + | chr4_4:60497747-60497766 | None:intergenic | 40.0% | |
!! | CCTTGCAATACAGTTTTTGG+AGG | - | chr4_4:60497744-60497763 | Msa0692140:intron | 40.0% |
!! | AATACAGTTTTTGGAGGGCT+GGG | - | chr4_4:60497750-60497769 | Msa0692140:intron | 40.0% |
GATTATCCTCCCATTTCAAC+GGG | + | chr4_4:60497974-60497993 | None:intergenic | 40.0% | |
GATATGCCTGGAACCTTTAT+TGG | - | chr4_4:60498029-60498048 | Msa0692140:intron | 40.0% | |
CCATTACCAATAAAGGTTCC+AGG | + | chr4_4:60498038-60498057 | None:intergenic | 40.0% | |
CCTGGAACCTTTATTGGTAA+TGG | - | chr4_4:60498035-60498054 | Msa0692140:intron | 40.0% | |
AGATTAAGCATGAGCTTGTC+CGG | - | chr4_4:60498347-60498366 | Msa0692140:intron | 40.0% | |
GGCTATTCTCTTCTTTCCAA+AGG | - | chr4_4:60498407-60498426 | Msa0692140:intron | 40.0% | |
!! | GAGAAACTTACAGCTTTAGG+AGG | - | chr4_4:60498493-60498512 | Msa0692140:intron | 40.0% |
ATTCCTGTGAACAAGTACAG+CGG | - | chr4_4:60498591-60498610 | Msa0692140:intron | 40.0% | |
ATCAAGTTCAGCCCATAACT+TGG | - | chr4_4:60498618-60498637 | Msa0692140:intron | 40.0% | |
TTGCACTTTACAAAACCCGT+AGG | + | chr4_4:60498650-60498669 | None:intergenic | 40.0% | |
AAATGCCACAATGACACTAG+CGG | - | chr4_4:60498777-60498796 | Msa0692140:intron | 40.0% | |
! | GCTTGTACCAAGGTATTCAA+TGG | - | chr4_4:60498815-60498834 | Msa0692140:intron | 40.0% |
TGTTTCGTTGCGTTATCAGA+AGG | - | chr4_4:60498840-60498859 | Msa0692140:intron | 40.0% | |
AACACTCATGCACTTGTAAG+AGG | - | chr4_4:60498983-60499002 | Msa0692140:intron | 40.0% | |
! | AAACATACTGCGAGAAGCAT+GGG | + | chr4_4:60499017-60499036 | None:intergenic | 40.0% |
CTTCATAATAGCGTCTTCAG+TGG | + | chr4_4:60499151-60499170 | None:intergenic | 40.0% | |
ATTATGGTCAGGTAACCTAG+TGG | - | chr4_4:60500256-60500275 | Msa0692140:intron | 40.0% | |
TACCAACTGAGTTATGCTCA+CGG | - | chr4_4:60500359-60500378 | Msa0692140:intron | 40.0% | |
ATAGGTCAGTTATTCCGAGA+CGG | + | chr4_4:60500530-60500549 | None:intergenic | 40.0% | |
GTAAGTCAATTAAACCGGGA+CGG | - | chr4_4:60500722-60500741 | Msa0692140:intron | 40.0% | |
CTCATCATCAAAGCCACTAT+GGG | + | chr4_4:60500866-60500885 | None:intergenic | 40.0% | |
TCTCATCATCAAAGCCACTA+TGG | + | chr4_4:60500867-60500886 | None:intergenic | 40.0% | |
!! | TTTGATGATGAGAGCTACAG+CGG | - | chr4_4:60500874-60500893 | Msa0692140:intron | 40.0% |
!! | AGCTACTTCTGCTCTAAAGA+CGG | - | chr4_4:60500988-60501007 | Msa0692140:intron | 40.0% |
GTGACGAAGAGAATTTGGTT+GGG | + | chr4_4:60501019-60501038 | None:intergenic | 40.0% | |
AACCAAATTCTCTTCGTCAC+CGG | - | chr4_4:60501019-60501038 | Msa0692140:intron | 40.0% | |
ACTTGGTTCAATCTCGACAA+AGG | - | chr4_4:60501304-60501323 | Msa0692140:intron | 40.0% | |
!! | CACAACTCACTCTAGTCTTT+TGG | + | chr4_4:60501560-60501579 | None:intergenic | 40.0% |
GGGTTGAGATCAAAATAGCT+AGG | + | chr4_4:60501608-60501627 | None:intergenic | 40.0% | |
ATCTCAACCCACAATTTGCA+TGG | - | chr4_4:60501618-60501637 | Msa0692140:CDS | 40.0% | |
AAATTAAGGGGAACGCTGTT+TGG | + | chr4_4:60501654-60501673 | None:intergenic | 40.0% | |
TTTATTTATGGCAGGGGAAG+AGG | + | chr4_4:60501729-60501748 | None:intergenic | 40.0% | |
! | TCAGGTTACTCTAAGGGATT+TGG | - | chr4_4:60496840-60496859 | Msa0692140:intron | 40.0% |
TACTTCAGAAGATGCAGCTA+AGG | - | chr4_4:60502116-60502135 | Msa0692140:intron | 40.0% | |
ACTTCAGAAGATGCAGCTAA+GGG | - | chr4_4:60502117-60502136 | Msa0692140:intron | 40.0% | |
ATTGTATTACATGTGCAGGC+AGG | + | chr4_4:60502188-60502207 | None:intergenic | 40.0% | |
AGTGTGAGGTGTATATGTTG+CGG | + | chr4_4:60502325-60502344 | None:intergenic | 40.0% | |
AATTTCATGTCAGGAGGAAG+GGG | + | chr4_4:60502486-60502505 | None:intergenic | 40.0% | |
GAATTTCATGTCAGGAGGAA+GGG | + | chr4_4:60502487-60502506 | None:intergenic | 40.0% | |
TGAATTTCATGTCAGGAGGA+AGG | + | chr4_4:60502488-60502507 | None:intergenic | 40.0% | |
!! | CATCTACAAAGTTGATGCCA+TGG | - | chr4_4:60502698-60502717 | Msa0692140:intron | 40.0% |
!! | GAGACTATAGCATTGGTTCT+TGG | + | chr4_4:60502835-60502854 | None:intergenic | 40.0% |
!!! | GGTGTCGTTTTCTTTTCTTC+AGG | + | chr4_4:60502889-60502908 | None:intergenic | 40.0% |
AAAACGACACCAGAGAAGAA+TGG | - | chr4_4:60502898-60502917 | Msa0692140:intron | 40.0% | |
GAAATGAAGAAGGAAACTGC+TGG | - | chr4_4:60502922-60502941 | Msa0692140:intron | 40.0% | |
CGAACCAATGGACAAAGATT+AGG | - | chr4_4:60502993-60503012 | Msa0692140:intron | 40.0% | |
! | CTGCTATTTAGCCAAATCTG+AGG | - | chr4_4:60503212-60503231 | Msa0692140:CDS | 40.0% |
GCTATTTAGCCAAATCTGAG+GGG | - | chr4_4:60503214-60503233 | Msa0692140:CDS | 40.0% | |
GGATGATATTGTTGCAATGC+AGG | - | chr4_4:60503271-60503290 | Msa0692140:five_prime_UTR | 40.0% | |
TCTCTCCTTCAACCCATCAA+GGG | - | chr4_4:60495006-60495025 | Msa0692140:three_prime_UTR | 45.0% | |
AAAAGAGTCGGCAGAAACTG+CGG | + | chr4_4:60495104-60495123 | None:intergenic | 45.0% | |
GATGAGAAAGAAGGGAAAGC+TGG | + | chr4_4:60495150-60495169 | None:intergenic | 45.0% | |
TTTCTGTTGGACCGTACTGT+AGG | + | chr4_4:60496216-60496235 | None:intergenic | 45.0% | |
!! | TTCAAAGCACTGTGACCGTT+TGG | - | chr4_4:60496361-60496380 | Msa0692140:intron | 45.0% |
TACTACAACAGAGACGCTGA+GGG | - | chr4_4:60496641-60496660 | Msa0692140:intron | 45.0% | |
TTTGTCAATCTCAGCAAGGG+TGG | - | chr4_4:60496803-60496822 | Msa0692140:intron | 45.0% | |
TCGAGTCTCAGGTTACTCTA+AGG | - | chr4_4:60496833-60496852 | Msa0692140:intron | 45.0% | |
CGAGTCTCAGGTTACTCTAA+GGG | - | chr4_4:60496834-60496853 | Msa0692140:intron | 45.0% | |
CATTGAAGGAATGGATGGCA+AGG | - | chr4_4:60496902-60496921 | Msa0692140:intron | 45.0% | |
AGTCTTCTCGTATAAGGTGC+AGG | + | chr4_4:60496954-60496973 | None:intergenic | 45.0% | |
GAAATCCGTGTGTCACATTG+TGG | + | chr4_4:60497082-60497101 | None:intergenic | 45.0% | |
CTTGTGTGTCACATTGTGGT+TGG | - | chr4_4:60497135-60497154 | Msa0692140:intron | 45.0% | |
! | ATTGTGGTGGGAATGTCACA+TGG | + | chr4_4:60497167-60497186 | None:intergenic | 45.0% |
CACTTGTGTGACATTGTGGT+GGG | + | chr4_4:60497179-60497198 | None:intergenic | 45.0% | |
CACCACAATGTCACACAAGT+GGG | - | chr4_4:60497178-60497197 | Msa0692140:intron | 45.0% | |
ATCCCACTTGTGTGACATTG+TGG | + | chr4_4:60497183-60497202 | None:intergenic | 45.0% | |
ATGTGTATATGCTGCGGTGT+CGG | + | chr4_4:60497271-60497290 | None:intergenic | 45.0% | |
!! | CAATACAGTTTTTGGAGGGC+TGG | - | chr4_4:60497749-60497768 | Msa0692140:intron | 45.0% |
TTATTTACAGCTTCTCCGGG+TGG | + | chr4_4:60497808-60497827 | None:intergenic | 45.0% | |
AATTTGCCCGTTGAAATGGG+AGG | - | chr4_4:60497965-60497984 | Msa0692140:intron | 45.0% | |
!! | TACTTTTTGCGATGACGACG+TGG | - | chr4_4:60498456-60498475 | Msa0692140:intron | 45.0% |
CACTTTACAAAACCCGTAGG+AGG | + | chr4_4:60498647-60498666 | None:intergenic | 45.0% | |
CAAACATACTGCGAGAAGCA+TGG | + | chr4_4:60499018-60499037 | None:intergenic | 45.0% | |
CATGCTTCTCGCAGTATGTT+TGG | - | chr4_4:60499016-60499035 | Msa0692140:intron | 45.0% | |
TCAGTGGGATTGCTAAAGAG+AGG | + | chr4_4:60499135-60499154 | None:intergenic | 45.0% | |
!! | TTTTTGGTCAGGTAGCCTAG+TGG | - | chr4_4:60500212-60500231 | Msa0692140:intron | 45.0% |
! | TAAGGTGGATTCTAGCCACT+AGG | + | chr4_4:60500230-60500249 | None:intergenic | 45.0% |
ATTATTATATGCAGGGGCCG+GGG | + | chr4_4:60500330-60500349 | None:intergenic | 45.0% | |
CATTATTATATGCAGGGGCC+GGG | + | chr4_4:60500331-60500350 | None:intergenic | 45.0% | |
GCATTATTATATGCAGGGGC+CGG | + | chr4_4:60500332-60500351 | None:intergenic | 45.0% | |
ACCAACTGAGTTATGCTCAC+GGG | - | chr4_4:60500360-60500379 | Msa0692140:intron | 45.0% | |
!! | AGAGCAGAAGTAGCTCTAGA+AGG | + | chr4_4:60500983-60501002 | None:intergenic | 45.0% |
!! | TACTTCTGCTCTAAAGACGG+CGG | - | chr4_4:60500991-60501010 | Msa0692140:intron | 45.0% |
GGTGACGAAGAGAATTTGGT+TGG | + | chr4_4:60501020-60501039 | None:intergenic | 45.0% | |
! | TCTCAAACGATTTGGGGGTT+TGG | - | chr4_4:60501399-60501418 | Msa0692140:CDS | 45.0% |
!! | AGCTCAACTGGTTTGAGCTA+AGG | - | chr4_4:60501423-60501442 | Msa0692140:CDS | 45.0% |
!! | GCTCAACTGGTTTGAGCTAA+GGG | - | chr4_4:60501424-60501443 | Msa0692140:CDS | 45.0% |
AGTCAAGGAGTTCAAGATCC+AGG | - | chr4_4:60501455-60501474 | Msa0692140:CDS | 45.0% | |
GTCAAGGAGTTCAAGATCCA+GGG | - | chr4_4:60501456-60501475 | Msa0692140:CDS | 45.0% | |
AACCCACAATTTGCATGGTG+TGG | - | chr4_4:60501623-60501642 | Msa0692140:CDS | 45.0% | |
CACCACACCATGCAAATTGT+GGG | + | chr4_4:60501628-60501647 | None:intergenic | 45.0% | |
TCACCACACCATGCAAATTG+TGG | + | chr4_4:60501629-60501648 | None:intergenic | 45.0% | |
TACTACATCAGAGACGCTGA+GGG | - | chr4_4:60501866-60501885 | Msa0692140:intron | 45.0% | |
AGGGTATGTTCTTCATCCCT+TGG | - | chr4_4:60501919-60501938 | Msa0692140:intron | 45.0% | |
TCGTGTCTCAGGTTACTCTA+AGG | - | chr4_4:60502071-60502090 | Msa0692140:intron | 45.0% | |
CGTGTCTCAGGTTACTCTAA+GGG | - | chr4_4:60502072-60502091 | Msa0692140:intron | 45.0% | |
AGGTGTATATGTTGCGGTGT+CGG | + | chr4_4:60502319-60502338 | None:intergenic | 45.0% | |
GAGTTCAGTCTTCTAGTGTG+AGG | + | chr4_4:60502339-60502358 | None:intergenic | 45.0% | |
ATTTCATGTCAGGAGGAAGG+GGG | + | chr4_4:60502485-60502504 | None:intergenic | 45.0% | |
TGTCTGGGAGACTATAGCAT+TGG | + | chr4_4:60502842-60502861 | None:intergenic | 45.0% | |
GGATGGTTCAGTATGTGTCT+GGG | + | chr4_4:60502857-60502876 | None:intergenic | 45.0% | |
!! | CTTTTCTTCAGGTTCGGAGT+GGG | + | chr4_4:60502878-60502897 | None:intergenic | 45.0% |
!! | TCTTTTCTTCAGGTTCGGAG+TGG | + | chr4_4:60502879-60502898 | None:intergenic | 45.0% |
CGAGCTCTTGAAATCTCTAG+AGG | - | chr4_4:60503063-60503082 | Msa0692140:intron | 45.0% | |
ATTTAGCCAAATCTGAGGGG+AGG | - | chr4_4:60503217-60503236 | Msa0692140:CDS | 45.0% | |
!!! | TTAATTTAAACTTTTTTTTA+AGG | - | chr4_4:60500154-60500173 | Msa0692140:intron | 5.0% |
CTCTCTCCTTCAACCCATCA+AGG | - | chr4_4:60495005-60495024 | Msa0692140:three_prime_UTR | 50.0% | |
TCAGCTTAAACCCCATCCCA+TGG | - | chr4_4:60495038-60495057 | Msa0692140:three_prime_UTR | 50.0% | |
CTCATCGTCAAAGCAGCCAT+GGG | + | chr4_4:60495057-60495076 | None:intergenic | 50.0% | |
TCTCATCGTCAAAGCAGCCA+TGG | + | chr4_4:60495058-60495077 | None:intergenic | 50.0% | |
AAAGAGTCGGCAGAAACTGC+GGG | + | chr4_4:60495103-60495122 | None:intergenic | 50.0% | |
TGGAGAAGAAGCGGTTGGAT+TGG | + | chr4_4:60495130-60495149 | None:intergenic | 50.0% | |
AAAGCTGGAGAAGAAGCGGT+TGG | + | chr4_4:60495135-60495154 | None:intergenic | 50.0% | |
AGGGAAAGCTGGAGAAGAAG+CGG | + | chr4_4:60495139-60495158 | None:intergenic | 50.0% | |
GCGGCGATGATGAGAAAGAA+GGG | + | chr4_4:60495158-60495177 | None:intergenic | 50.0% | |
TTCGAGTAGACACTTGACCG+AGG | + | chr4_4:60496162-60496181 | None:intergenic | 50.0% | |
ATTTATGGCATGGGGAAGGG+AGG | + | chr4_4:60496495-60496514 | None:intergenic | 50.0% | |
GTACTACAACAGAGACGCTG+AGG | - | chr4_4:60496640-60496659 | Msa0692140:intron | 50.0% | |
GTGGTAACAGATCGAGTCTC+AGG | - | chr4_4:60496822-60496841 | Msa0692140:intron | 50.0% | |
!! | TGCTAGGGGCATTGAAGGAA+TGG | - | chr4_4:60496893-60496912 | Msa0692140:intron | 50.0% |
!! | AGGGGCATTGAAGGAATGGA+TGG | - | chr4_4:60496897-60496916 | Msa0692140:intron | 50.0% |
TTCTCGTATAAGGTGCAGGC+AGG | + | chr4_4:60496950-60496969 | None:intergenic | 50.0% | |
TCACTTGTGTGTCATCGTGG+TGG | - | chr4_4:60497033-60497052 | Msa0692140:intron | 50.0% | |
CACTTGTGTGTCATCGTGGT+GGG | - | chr4_4:60497034-60497053 | Msa0692140:intron | 50.0% | |
ACTTGTGTGTCATCGTGGTG+GGG | - | chr4_4:60497035-60497054 | Msa0692140:intron | 50.0% | |
CCGTGTGTCACATTGTGGTT+GGG | + | chr4_4:60497077-60497096 | None:intergenic | 50.0% | |
CCCAACCACAATGTGACACA+CGG | - | chr4_4:60497074-60497093 | Msa0692140:intron | 50.0% | |
TCCGTGTGTCACATTGTGGT+TGG | + | chr4_4:60497078-60497097 | None:intergenic | 50.0% | |
CCACTTGTGTGACATTGTGG+TGG | + | chr4_4:60497180-60497199 | None:intergenic | 50.0% | |
CCACCACAATGTCACACAAG+TGG | - | chr4_4:60497177-60497196 | Msa0692140:intron | 50.0% | |
! | GTTGTTATTGGCCGTGCTCA+AGG | - | chr4_4:60498536-60498555 | Msa0692140:intron | 50.0% |
TTGCCGCTGTACTTGTTCAC+AGG | + | chr4_4:60498597-60498616 | None:intergenic | 50.0% | |
GTAGGAGGCTGCCAAGTTAT+GGG | + | chr4_4:60498632-60498651 | None:intergenic | 50.0% | |
CATAACTTGGCAGCCTCCTA+CGG | - | chr4_4:60498631-60498650 | Msa0692140:intron | 50.0% | |
ATAACTTGGCAGCCTCCTAC+GGG | - | chr4_4:60498632-60498651 | Msa0692140:intron | 50.0% | |
! | ACCTTCCGCTAGTGTCATTG+TGG | + | chr4_4:60498785-60498804 | None:intergenic | 50.0% |
ACTAGCGGAAGGTGAAGCTT+GGG | - | chr4_4:60498792-60498811 | Msa0692140:intron | 50.0% | |
! | AGTGAATAAGTGGGGTGTCC+AGG | - | chr4_4:60500297-60500316 | Msa0692140:intron | 50.0% |
! | GTGAATAAGTGGGGTGTCCA+GGG | - | chr4_4:60500298-60500317 | Msa0692140:intron | 50.0% |
TCCCGTGAGCATAACTCAGT+TGG | + | chr4_4:60500364-60500383 | None:intergenic | 50.0% | |
AGTGATTACTCCCTCCGTCT+CGG | - | chr4_4:60500513-60500532 | Msa0692140:CDS | 50.0% | |
GTCAGTTATTCCGAGACGGA+GGG | + | chr4_4:60500526-60500545 | None:intergenic | 50.0% | |
AGTCAATTAAACCGGGACGG+AGG | - | chr4_4:60500725-60500744 | Msa0692140:intron | 50.0% | |
GTCAATTAAACCGGGACGGA+GGG | - | chr4_4:60500726-60500745 | Msa0692140:intron | 50.0% | |
TCTCGTCTTTCTTCTCACCC+AGG | - | chr4_4:60500820-60500839 | Msa0692140:intron | 50.0% | |
CTCGTCTTTCTTCTCACCCA+GGG | - | chr4_4:60500821-60500840 | Msa0692140:intron | 50.0% | |
TTGGCTTCGTGCAGAAAAGC+CGG | + | chr4_4:60500922-60500941 | None:intergenic | 50.0% | |
!! | GCAGAAGTAGCTCTAGAAGG+CGG | + | chr4_4:60500980-60500999 | None:intergenic | 50.0% |
GACCGGTGACGAAGAGAATT+TGG | + | chr4_4:60501024-60501043 | None:intergenic | 50.0% | |
GTACTACATCAGAGACGCTG+AGG | - | chr4_4:60501865-60501884 | Msa0692140:intron | 50.0% | |
!! | GATGCAGCTAAGGGCATTCA+AGG | - | chr4_4:60502126-60502145 | Msa0692140:intron | 50.0% |
!! | AGCTAAGGGCATTCAAGGCA+TGG | - | chr4_4:60502131-60502150 | Msa0692140:intron | 50.0% |
!! | AAGGGCATTCAAGGCATGGA+TGG | - | chr4_4:60502135-60502154 | Msa0692140:intron | 50.0% |
CATTCAAGGCATGGATGGCA+AGG | - | chr4_4:60502140-60502159 | Msa0692140:intron | 50.0% | |
ACATGTGCAGGCAGGCTAAA+GGG | + | chr4_4:60502180-60502199 | None:intergenic | 50.0% | |
TACATGTGCAGGCAGGCTAA+AGG | + | chr4_4:60502181-60502200 | None:intergenic | 50.0% | |
TTTCATGTCAGGAGGAAGGG+GGG | + | chr4_4:60502484-60502503 | None:intergenic | 50.0% | |
GGGATGGTTCAGTATGTGTC+TGG | + | chr4_4:60502858-60502877 | None:intergenic | 50.0% | |
GGAAACTGCTGGCAAGAAGA+AGG | - | chr4_4:60502933-60502952 | Msa0692140:intron | 50.0% | |
GGTAGTTGCAGACGAACCAA+TGG | - | chr4_4:60502981-60503000 | Msa0692140:intron | 50.0% | |
GTCAAAGCAGCCATGGGATG+GGG | + | chr4_4:60495051-60495070 | None:intergenic | 55.0% | |
CGTCAAAGCAGCCATGGGAT+GGG | + | chr4_4:60495052-60495071 | None:intergenic | 55.0% | |
TCGTCAAAGCAGCCATGGGA+TGG | + | chr4_4:60495053-60495072 | None:intergenic | 55.0% | |
AAGAGTCGGCAGAAACTGCG+GGG | + | chr4_4:60495102-60495121 | None:intergenic | 55.0% | |
GGCGGCGATGATGAGAAAGA+AGG | + | chr4_4:60495159-60495178 | None:intergenic | 55.0% | |
TTCTCATCATCGCCGCCTTC+TGG | - | chr4_4:60495162-60495181 | Msa0692140:three_prime_UTR | 55.0% | |
!! | GAAGAGGTTGGTGCTAGGCT+CGG | + | chr4_4:60495214-60495233 | None:intergenic | 55.0% |
!! | GAGACGAAGAGGTTGGTGCT+AGG | + | chr4_4:60495219-60495238 | None:intergenic | 55.0% |
AGCACCAACCTCTTCGTCTC+TGG | - | chr4_4:60495219-60495238 | Msa0692140:three_prime_UTR | 55.0% | |
CGAACCAGAGACGAAGAGGT+TGG | + | chr4_4:60495226-60495245 | None:intergenic | 55.0% | |
AAGGCGAACCAGAGACGAAG+AGG | + | chr4_4:60495230-60495249 | None:intergenic | 55.0% | |
!! | GATGCTGCTAGGGGCATTGA+AGG | - | chr4_4:60496888-60496907 | Msa0692140:intron | 55.0% |
TAAGGTGCAGGCAGGCCAAA+GGG | + | chr4_4:60496942-60496961 | None:intergenic | 55.0% | |
ATAAGGTGCAGGCAGGCCAA+AGG | + | chr4_4:60496943-60496962 | None:intergenic | 55.0% | |
! | CATCGTGGTGGGGATTTCAC+AGG | - | chr4_4:60497045-60497064 | Msa0692140:intron | 55.0% |
TTTACAGCTTCTCCGGGTGG+TGG | + | chr4_4:60497805-60497824 | None:intergenic | 55.0% | |
CGATGACGACGTGGAGTCTT+AGG | - | chr4_4:60498465-60498484 | Msa0692140:intron | 55.0% | |
CGTAGGAGGCTGCCAAGTTA+TGG | + | chr4_4:60498633-60498652 | None:intergenic | 55.0% | |
GCCACAATGACACTAGCGGA+AGG | - | chr4_4:60498781-60498800 | Msa0692140:intron | 55.0% | |
CACTAGCGGAAGGTGAAGCT+TGG | - | chr4_4:60498791-60498810 | Msa0692140:intron | 55.0% | |
CTAGCGGAAGGTGAAGCTTG+GGG | - | chr4_4:60498793-60498812 | Msa0692140:intron | 55.0% | |
GAAGCTTGGGGCTTGTACCA+AGG | - | chr4_4:60498805-60498824 | Msa0692140:intron | 55.0% | |
GAGTTATGCTCACGGGACGA+AGG | - | chr4_4:60500367-60500386 | Msa0692140:intron | 55.0% | |
GGTCAGTTATTCCGAGACGG+AGG | + | chr4_4:60500527-60500546 | None:intergenic | 55.0% | |
AAGAGATACTCCCTCCGTCC+CGG | + | chr4_4:60500739-60500758 | None:intergenic | 55.0% | |
AGAAAAGCCGGCAGAAACCG+CGG | + | chr4_4:60500910-60500929 | None:intergenic | 55.0% | |
GTTGAAGCGAACGGGACAGT+GGG | + | chr4_4:60500956-60500975 | None:intergenic | 55.0% | |
! | TGGGGGTTTGGTAGCTCAAC+TGG | - | chr4_4:60501411-60501430 | Msa0692140:CDS | 55.0% |
TCTTGTCGGGACTTGAACCC+TGG | + | chr4_4:60501476-60501495 | None:intergenic | 55.0% | |
TCCGTTTGCCGATCTCAGCA+AGG | - | chr4_4:60502037-60502056 | Msa0692140:intron | 55.0% | |
CCCTTGCTGAGATCGGCAAA+CGG | + | chr4_4:60502041-60502060 | None:intergenic | 55.0% | |
CCGTTTGCCGATCTCAGCAA+GGG | - | chr4_4:60502038-60502057 | Msa0692140:intron | 55.0% | |
TTTGCCGATCTCAGCAAGGG+TGG | - | chr4_4:60502041-60502060 | Msa0692140:intron | 55.0% | |
! | TCTTCAGGTTCGGAGTGGGA+TGG | + | chr4_4:60502874-60502893 | None:intergenic | 55.0% |
CACTCACCTCCCCTCAGATT+TGG | + | chr4_4:60503226-60503245 | None:intergenic | 55.0% | |
GACGATGAGAGCTGCAGCTG+CGG | - | chr4_4:60495068-60495087 | Msa0692140:three_prime_UTR | 60.0% | |
GCAAGACCAAGACCACCACC+CGG | - | chr4_4:60497790-60497809 | Msa0692140:intron | 60.0% | |
CGTGGAGCAGTCCTTGAGCA+CGG | + | chr4_4:60498550-60498569 | None:intergenic | 60.0% | |
CTCAAGGACTGCTCCACGCT+TGG | - | chr4_4:60498552-60498571 | Msa0692140:intron | 60.0% | |
ACCTCGCTCGTCACGAACAC+AGG | + | chr4_4:60498720-60498739 | None:intergenic | 60.0% | |
GATGAGAGCTACAGCGGCAG+CGG | - | chr4_4:60500880-60500899 | Msa0692140:intron | 60.0% | |
AAAAGCCGGCAGAAACCGCG+GGG | + | chr4_4:60500908-60500927 | None:intergenic | 60.0% | |
GAAAAGCCGGCAGAAACCGC+GGG | + | chr4_4:60500909-60500928 | None:intergenic | 60.0% | |
ACAGTGGGAGAAGACGCGGT+TGG | + | chr4_4:60500941-60500960 | None:intergenic | 60.0% | |
CGTTGAAGCGAACGGGACAG+TGG | + | chr4_4:60500957-60500976 | None:intergenic | 60.0% | |
! | AAGGCGGCGTTGAAGCGAAC+GGG | + | chr4_4:60500964-60500983 | None:intergenic | 60.0% |
! | GAAGGCGGCGTTGAAGCGAA+CGG | + | chr4_4:60500965-60500984 | None:intergenic | 60.0% |
GCCACCACCCTTGCTGAGAT+CGG | + | chr4_4:60502048-60502067 | None:intergenic | 60.0% | |
GTGGTGGCAGATCGTGTCTC+AGG | - | chr4_4:60502060-60502079 | Msa0692140:intron | 60.0% | |
GATGAGAGCTGCAGCTGCGG+CGG | - | chr4_4:60495071-60495090 | Msa0692140:three_prime_UTR | 65.0% | |
ATCTGTCGAGCGGAAGGCGG+CGG | + | chr4_4:60495189-60495208 | None:intergenic | 65.0% | |
GCCATCTGTCGAGCGGAAGG+CGG | + | chr4_4:60495192-60495211 | None:intergenic | 65.0% | |
TCGGCCATCTGTCGAGCGGA+AGG | + | chr4_4:60495195-60495214 | None:intergenic | 65.0% | |
AGGCTCGGCCATCTGTCGAG+CGG | + | chr4_4:60495199-60495218 | None:intergenic | 65.0% | |
! | GCTTCTCCGGGTGGTGGTCT+TGG | + | chr4_4:60497799-60497818 | None:intergenic | 65.0% |
TGCGAGCATGCTGCCAAGCG+TGG | + | chr4_4:60498568-60498587 | None:intergenic | 65.0% | |
GCCTGTGTTCGTGACGAGCG+AGG | - | chr4_4:60498716-60498735 | Msa0692140:intron | 65.0% | |
GGTGTCCAGGGTTCGAACCC+CGG | - | chr4_4:60500310-60500329 | Msa0692140:intron | 65.0% | |
CGGGACAGTGGGAGAAGACG+CGG | + | chr4_4:60500945-60500964 | None:intergenic | 65.0% | |
GCCGATCTCAGCAAGGGTGG+TGG | - | chr4_4:60502044-60502063 | Msa0692140:intron | 65.0% | |
GAAGGCGGCGGTCCAGAAGG+CGG | + | chr4_4:60495177-60495196 | None:intergenic | 70.0% | |
GCCGCCTTCCGCTCGACAGA+TGG | - | chr4_4:60495188-60495207 | Msa0692140:three_prime_UTR | 70.0% | |
GAGAGCTGCAGCTGCGGCGG+CGG | - | chr4_4:60495074-60495093 | Msa0692140:three_prime_UTR | 75.0% | |
GCGGAAGGCGGCGGTCCAGA+AGG | + | chr4_4:60495180-60495199 | None:intergenic | 75.0% | |
AGGGGCCGGGGTTCGAACCC+TGG | + | chr4_4:60500318-60500337 | None:intergenic | 75.0% | |
CGGTGCCCCGCGGTTTCTGC+CGG | - | chr4_4:60500900-60500919 | Msa0692140:intron | 75.0% | |
! | ACAGCGGCAGCGGTGCCCCG+CGG | - | chr4_4:60500890-60500909 | Msa0692140:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 60494926 | 60503384 | 60494926 | ID=Msa0692140;Name=Msa0692140 |
chr4_4 | mRNA | 60494926 | 60503384 | 60494926 | ID=Msa0692140-mRNA-1;Parent=Msa0692140;Name=Msa0692140-mRNA-1;_AED=0.20;_eAED=0.20;_QI=131|0.75|0.66|1|1|1|9|370|397 |
chr4_4 | exon | 60494926 | 60495517 | 60494926 | ID=Msa0692140-mRNA-1:exon:16668;Parent=Msa0692140-mRNA-1 |
chr4_4 | exon | 60496149 | 60496255 | 60496149 | ID=Msa0692140-mRNA-1:exon:16667;Parent=Msa0692140-mRNA-1 |
chr4_4 | exon | 60496389 | 60496457 | 60496389 | ID=Msa0692140-mRNA-1:exon:16666;Parent=Msa0692140-mRNA-1 |
chr4_4 | exon | 60497270 | 60497416 | 60497270 | ID=Msa0692140-mRNA-1:exon:16665;Parent=Msa0692140-mRNA-1 |
chr4_4 | exon | 60499573 | 60499798 | 60499573 | ID=Msa0692140-mRNA-1:exon:16664;Parent=Msa0692140-mRNA-1 |
chr4_4 | exon | 60500491 | 60500553 | 60500491 | ID=Msa0692140-mRNA-1:exon:16663;Parent=Msa0692140-mRNA-1 |
chr4_4 | exon | 60501387 | 60501493 | 60501387 | ID=Msa0692140-mRNA-1:exon:16662;Parent=Msa0692140-mRNA-1 |
chr4_4 | exon | 60501614 | 60501682 | 60501614 | ID=Msa0692140-mRNA-1:exon:16661;Parent=Msa0692140-mRNA-1 |
chr4_4 | exon | 60503070 | 60503384 | 60503070 | ID=Msa0692140-mRNA-1:exon:16660;Parent=Msa0692140-mRNA-1 |
chr4_4 | five_prime_UTR | 60503254 | 60503384 | 60503254 | ID=Msa0692140-mRNA-1:five_prime_utr;Parent=Msa0692140-mRNA-1 |
chr4_4 | CDS | 60503070 | 60503253 | 60503070 | ID=Msa0692140-mRNA-1:cds;Parent=Msa0692140-mRNA-1 |
chr4_4 | CDS | 60501614 | 60501682 | 60501614 | ID=Msa0692140-mRNA-1:cds;Parent=Msa0692140-mRNA-1 |
chr4_4 | CDS | 60501387 | 60501493 | 60501387 | ID=Msa0692140-mRNA-1:cds;Parent=Msa0692140-mRNA-1 |
chr4_4 | CDS | 60500491 | 60500553 | 60500491 | ID=Msa0692140-mRNA-1:cds;Parent=Msa0692140-mRNA-1 |
chr4_4 | CDS | 60499573 | 60499798 | 60499573 | ID=Msa0692140-mRNA-1:cds;Parent=Msa0692140-mRNA-1 |
chr4_4 | CDS | 60497270 | 60497416 | 60497270 | ID=Msa0692140-mRNA-1:cds;Parent=Msa0692140-mRNA-1 |
chr4_4 | CDS | 60496389 | 60496457 | 60496389 | ID=Msa0692140-mRNA-1:cds;Parent=Msa0692140-mRNA-1 |
chr4_4 | CDS | 60496149 | 60496255 | 60496149 | ID=Msa0692140-mRNA-1:cds;Parent=Msa0692140-mRNA-1 |
chr4_4 | CDS | 60495296 | 60495517 | 60495296 | ID=Msa0692140-mRNA-1:cds;Parent=Msa0692140-mRNA-1 |
chr4_4 | three_prime_UTR | 60494926 | 60495295 | 60494926 | ID=Msa0692140-mRNA-1:three_prime_utr;Parent=Msa0692140-mRNA-1 |
Gene Sequence |
Protein sequence |