Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0693770 | XP_013456861.1 | 98.313 | 652 | 11 | 0 | 1 | 652 | 1 | 652 | 0.0 | 1305 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0693770 | sp|Q9C9A6|PUB10_ARATH | 62.058 | 651 | 213 | 10 | 1 | 648 | 1 | 620 | 0.0 | 732 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0693770 | A0A072UML1 | 98.313 | 652 | 11 | 0 | 1 | 652 | 1 | 652 | 0.0 | 1305 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0140140 | Msa0693770 | 0.811081 | 8.365842e-51 | -8.615850e-47 |
Msa0430970 | Msa0693770 | 0.809916 | 1.493500e-50 | -8.615850e-47 |
Msa0519360 | Msa0693770 | 0.808404 | 3.149460e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0693770 | MtrunA17_Chr4g0044411 | 98.313 | 652 | 11 | 0 | 1 | 652 | 1 | 652 | 0.0 | 1305 |
Msa0693770 | MtrunA17_Chr4g0031431 | 44.671 | 638 | 297 | 10 | 39 | 651 | 25 | 631 | 2.29e-164 | 486 |
Msa0693770 | MtrunA17_Chr1g0199321 | 45.765 | 614 | 295 | 10 | 46 | 650 | 38 | 622 | 4.61e-157 | 466 |
Msa0693770 | MtrunA17_Chr7g0237931 | 52.255 | 377 | 171 | 3 | 272 | 646 | 236 | 605 | 1.54e-123 | 379 |
Msa0693770 | MtrunA17_Chr7g0248251 | 37.915 | 633 | 333 | 13 | 41 | 652 | 53 | 646 | 7.36e-118 | 365 |
Msa0693770 | MtrunA17_Chr5g0437411 | 46.056 | 393 | 195 | 6 | 273 | 648 | 293 | 685 | 7.67e-100 | 320 |
Msa0693770 | MtrunA17_Chr2g0284461 | 45.876 | 388 | 186 | 10 | 271 | 642 | 290 | 669 | 1.23e-86 | 286 |
Msa0693770 | MtrunA17_Chr7g0234671 | 37.750 | 400 | 233 | 9 | 257 | 649 | 62 | 452 | 5.04e-81 | 263 |
Msa0693770 | MtrunA17_Chr7g0275081 | 40.506 | 395 | 208 | 10 | 267 | 648 | 72 | 452 | 4.01e-78 | 256 |
Msa0693770 | MtrunA17_Chr1g0152561 | 47.826 | 276 | 144 | 0 | 373 | 648 | 61 | 336 | 2.50e-72 | 237 |
Msa0693770 | MtrunA17_Chr7g0261371 | 48.364 | 275 | 141 | 1 | 373 | 647 | 514 | 787 | 7.88e-69 | 239 |
Msa0693770 | MtrunA17_Chr7g0261371 | 53.488 | 86 | 38 | 1 | 263 | 348 | 233 | 316 | 2.19e-25 | 112 |
Msa0693770 | MtrunA17_Chr3g0106931 | 49.823 | 283 | 141 | 1 | 365 | 647 | 545 | 826 | 1.24e-68 | 239 |
Msa0693770 | MtrunA17_Chr3g0106931 | 56.579 | 76 | 33 | 0 | 271 | 346 | 231 | 306 | 2.89e-26 | 114 |
Msa0693770 | MtrunA17_Chr3g0134761 | 45.000 | 280 | 150 | 1 | 373 | 648 | 51 | 330 | 3.05e-67 | 223 |
Msa0693770 | MtrunA17_Chr1g0183781 | 46.182 | 275 | 147 | 1 | 373 | 647 | 440 | 713 | 2.87e-66 | 231 |
Msa0693770 | MtrunA17_Chr1g0183781 | 31.450 | 407 | 234 | 14 | 270 | 646 | 238 | 629 | 4.33e-35 | 141 |
Msa0693770 | MtrunA17_Chr4g0013091 | 32.000 | 650 | 364 | 23 | 39 | 648 | 87 | 698 | 4.66e-65 | 228 |
Msa0693770 | MtrunA17_Chr2g0290151 | 44.444 | 279 | 155 | 0 | 373 | 651 | 175 | 453 | 6.54e-63 | 216 |
Msa0693770 | MtrunA17_Chr4g0059201 | 28.549 | 641 | 402 | 16 | 41 | 651 | 93 | 707 | 9.43e-62 | 218 |
Msa0693770 | MtrunA17_Chr1g0189811 | 37.018 | 389 | 223 | 9 | 273 | 650 | 63 | 440 | 1.54e-59 | 206 |
Msa0693770 | MtrunA17_Chr3g0117851 | 31.807 | 393 | 215 | 11 | 272 | 651 | 274 | 626 | 1.63e-47 | 177 |
Msa0693770 | MtrunA17_Chr3g0122721 | 29.348 | 460 | 248 | 12 | 258 | 651 | 263 | 711 | 2.46e-46 | 175 |
Msa0693770 | MtrunA17_Chr5g0413681 | 35.411 | 401 | 222 | 13 | 275 | 651 | 282 | 669 | 8.53e-44 | 167 |
Msa0693770 | MtrunA17_Chr2g0280671 | 30.357 | 392 | 233 | 9 | 275 | 651 | 17 | 383 | 4.28e-36 | 139 |
Msa0693770 | MtrunA17_Chr8g0377151 | 27.397 | 438 | 245 | 9 | 274 | 648 | 283 | 710 | 1.13e-35 | 143 |
Msa0693770 | MtrunA17_Chr8g0377151 | 23.420 | 269 | 155 | 6 | 392 | 610 | 447 | 714 | 9.75e-12 | 68.2 |
Msa0693770 | MtrunA17_Chr3g0118001 | 32.491 | 277 | 182 | 2 | 374 | 647 | 212 | 486 | 2.49e-35 | 140 |
Msa0693770 | MtrunA17_Chr4g0044631 | 30.964 | 394 | 242 | 12 | 270 | 647 | 11 | 390 | 5.20e-34 | 134 |
Msa0693770 | MtrunA17_Chr3g0110121 | 26.250 | 400 | 260 | 11 | 269 | 646 | 32 | 418 | 4.65e-32 | 129 |
Msa0693770 | MtrunA17_Chr4g0048811 | 29.268 | 328 | 200 | 8 | 273 | 572 | 5 | 328 | 6.68e-30 | 120 |
Msa0693770 | MtrunA17_Chr1g0198984 | 49.123 | 114 | 56 | 1 | 286 | 399 | 1 | 112 | 2.13e-28 | 109 |
Msa0693770 | MtrunA17_Chr5g0429231 | 32.517 | 286 | 176 | 5 | 373 | 647 | 34 | 313 | 1.18e-26 | 111 |
Msa0693770 | MtrunA17_Chr5g0420471 | 26.716 | 408 | 249 | 16 | 271 | 644 | 23 | 414 | 1.64e-26 | 112 |
Msa0693770 | MtrunA17_Chr3g0137061 | 30.721 | 319 | 205 | 7 | 342 | 647 | 79 | 394 | 3.04e-26 | 112 |
Msa0693770 | MtrunA17_Chr5g0434171 | 24.495 | 396 | 269 | 11 | 271 | 646 | 33 | 418 | 3.62e-26 | 112 |
Msa0693770 | MtrunA17_Chr6g0479261 | 26.238 | 404 | 256 | 14 | 271 | 644 | 23 | 414 | 3.98e-26 | 111 |
Msa0693770 | MtrunA17_Chr6g0451581 | 27.481 | 262 | 182 | 3 | 385 | 643 | 253 | 509 | 2.25e-25 | 110 |
Msa0693770 | MtrunA17_Chr5g0400971 | 25.429 | 350 | 238 | 8 | 273 | 616 | 67 | 399 | 2.33e-25 | 109 |
Msa0693770 | MtrunA17_Chr8g0373031 | 54.667 | 75 | 34 | 0 | 274 | 348 | 276 | 350 | 1.28e-24 | 109 |
Msa0693770 | MtrunA17_Chr8g0384041 | 26.359 | 368 | 218 | 13 | 270 | 605 | 7 | 353 | 3.40e-24 | 105 |
Msa0693770 | MtrunA17_Chr5g0404311 | 48.864 | 88 | 45 | 0 | 261 | 348 | 261 | 348 | 3.52e-24 | 107 |
Msa0693770 | MtrunA17_Chr7g0267501 | 28.105 | 306 | 184 | 10 | 269 | 550 | 4 | 297 | 6.44e-24 | 105 |
Msa0693770 | MtrunA17_Chr1g0177261 | 27.302 | 315 | 171 | 9 | 277 | 547 | 11 | 311 | 2.72e-23 | 103 |
Msa0693770 | MtrunA17_Chr3g0129811 | 26.389 | 360 | 224 | 13 | 271 | 605 | 81 | 424 | 4.15e-23 | 103 |
Msa0693770 | MtrunA17_Chr1g0149941 | 31.365 | 271 | 172 | 7 | 389 | 647 | 190 | 458 | 4.43e-23 | 103 |
Msa0693770 | MtrunA17_Chr1g0177281 | 27.619 | 315 | 170 | 9 | 277 | 547 | 11 | 311 | 6.08e-23 | 102 |
Msa0693770 | MtrunA17_Chr1g0152291 | 28.818 | 347 | 215 | 10 | 273 | 606 | 45 | 372 | 1.00e-22 | 101 |
Msa0693770 | MtrunA17_Chr1g0199031 | 46.552 | 116 | 45 | 1 | 450 | 565 | 18 | 116 | 1.17e-22 | 94.0 |
Msa0693770 | MtrunA17_Chr1g0177271 | 25.359 | 418 | 247 | 14 | 277 | 644 | 11 | 413 | 7.18e-22 | 99.0 |
Msa0693770 | MtrunA17_Chr2g0278251 | 45.763 | 118 | 60 | 3 | 420 | 535 | 5 | 120 | 9.78e-21 | 89.4 |
Msa0693770 | MtrunA17_Chr8g0353271 | 29.167 | 288 | 186 | 8 | 373 | 643 | 8 | 294 | 1.95e-19 | 90.1 |
Msa0693770 | MtrunA17_Chr2g0322021 | 29.642 | 307 | 184 | 10 | 269 | 559 | 2 | 292 | 2.99e-19 | 90.5 |
Msa0693770 | MtrunA17_Chr3g0144071 | 25.294 | 340 | 186 | 8 | 273 | 545 | 30 | 368 | 3.21e-18 | 89.4 |
Msa0693770 | MtrunA17_Chr1g0177301 | 26.273 | 373 | 219 | 13 | 269 | 588 | 2 | 371 | 1.02e-17 | 85.9 |
Msa0693770 | MtrunA17_Chr8g0390311 | 52.778 | 72 | 32 | 2 | 274 | 344 | 396 | 466 | 6.90e-16 | 82.0 |
Msa0693770 | MtrunA17_Chr1g0196911 | 28.571 | 231 | 132 | 6 | 233 | 440 | 462 | 682 | 8.68e-16 | 81.6 |
Msa0693770 | MtrunA17_Chr5g0435041 | 28.514 | 249 | 129 | 6 | 405 | 647 | 92 | 297 | 2.67e-15 | 78.2 |
Msa0693770 | MtrunA17_Chr8g0346441 | 24.793 | 363 | 229 | 9 | 275 | 604 | 261 | 612 | 2.08e-14 | 77.0 |
Msa0693770 | MtrunA17_Chr5g0412171 | 43.284 | 67 | 38 | 0 | 273 | 339 | 732 | 798 | 3.26e-14 | 76.3 |
Msa0693770 | MtrunA17_Chr7g0275961 | 25.628 | 398 | 239 | 11 | 275 | 644 | 257 | 625 | 3.93e-14 | 76.3 |
Msa0693770 | MtrunA17_Chr1g0202971 | 46.970 | 66 | 35 | 0 | 274 | 339 | 649 | 714 | 5.70e-14 | 75.5 |
Msa0693770 | MtrunA17_Chr2g0328101 | 47.761 | 67 | 35 | 0 | 273 | 339 | 740 | 806 | 2.84e-13 | 73.2 |
Msa0693770 | MtrunA17_Chr7g0247831 | 44.286 | 70 | 39 | 0 | 274 | 343 | 827 | 896 | 4.19e-13 | 72.8 |
Msa0693770 | MtrunA17_Chr4g0025501 | 30.065 | 153 | 91 | 6 | 271 | 419 | 4 | 144 | 5.12e-13 | 71.6 |
Msa0693770 | MtrunA17_Chr3g0111451 | 30.576 | 278 | 154 | 7 | 372 | 648 | 80 | 319 | 1.78e-12 | 69.7 |
Msa0693770 | MtrunA17_Chr1g0199021 | 82.353 | 34 | 6 | 0 | 272 | 305 | 24 | 57 | 3.78e-12 | 61.6 |
Msa0693770 | MtrunA17_Chr7g0259851 | 28.571 | 217 | 151 | 3 | 371 | 584 | 183 | 398 | 4.83e-12 | 69.3 |
Msa0693770 | MtrunA17_Chr6g0449461 | 27.273 | 275 | 160 | 5 | 376 | 647 | 44 | 281 | 8.48e-12 | 67.0 |
Msa0693770 | MtrunA17_Chr5g0394261 | 28.500 | 200 | 141 | 2 | 371 | 568 | 193 | 392 | 1.41e-11 | 67.8 |
Msa0693770 | MtrunA17_Chr7g0215741 | 27.749 | 191 | 134 | 2 | 366 | 552 | 551 | 741 | 1.79e-11 | 67.4 |
Msa0693770 | MtrunA17_Chr1g0205751 | 26.066 | 211 | 154 | 2 | 371 | 579 | 196 | 406 | 7.42e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0693770 | AT1G71020.1 | 62.058 | 651 | 213 | 10 | 1 | 648 | 1 | 620 | 0.0 | 732 |
Msa0693770 | AT1G23030.1 | 60.775 | 645 | 204 | 9 | 13 | 651 | 11 | 612 | 0.0 | 721 |
Msa0693770 | AT1G71020.2 | 65.844 | 486 | 148 | 6 | 165 | 648 | 3 | 472 | 0.0 | 595 |
Msa0693770 | AT3G46510.1 | 44.410 | 644 | 286 | 10 | 40 | 651 | 29 | 632 | 3.64e-163 | 483 |
Msa0693770 | AT3G54850.1 | 43.740 | 615 | 307 | 10 | 46 | 650 | 39 | 624 | 5.28e-148 | 443 |
Msa0693770 | AT2G28830.1 | 45.421 | 546 | 278 | 10 | 118 | 649 | 24 | 563 | 2.71e-140 | 422 |
Msa0693770 | AT5G42340.1 | 37.361 | 629 | 334 | 9 | 41 | 652 | 75 | 660 | 1.66e-113 | 355 |
Msa0693770 | AT1G29340.1 | 36.709 | 553 | 303 | 15 | 123 | 642 | 143 | 681 | 1.47e-80 | 270 |
Msa0693770 | AT3G07360.1 | 37.755 | 392 | 231 | 8 | 269 | 652 | 70 | 456 | 2.50e-76 | 251 |
Msa0693770 | AT2G23140.3 | 48.410 | 283 | 141 | 2 | 369 | 647 | 346 | 627 | 2.86e-71 | 243 |
Msa0693770 | AT2G23140.3 | 51.899 | 79 | 38 | 0 | 270 | 348 | 38 | 116 | 2.58e-25 | 111 |
Msa0693770 | AT2G23140.5 | 48.410 | 283 | 141 | 2 | 369 | 647 | 346 | 627 | 2.86e-71 | 243 |
Msa0693770 | AT2G23140.5 | 51.899 | 79 | 38 | 0 | 270 | 348 | 38 | 116 | 2.58e-25 | 111 |
Msa0693770 | AT2G23140.2 | 47.405 | 289 | 151 | 1 | 359 | 647 | 529 | 816 | 5.66e-70 | 243 |
Msa0693770 | AT2G23140.2 | 51.899 | 79 | 38 | 0 | 270 | 348 | 227 | 305 | 4.86e-25 | 111 |
Msa0693770 | AT2G23140.4 | 47.405 | 289 | 151 | 1 | 359 | 647 | 529 | 816 | 5.66e-70 | 243 |
Msa0693770 | AT2G23140.4 | 51.899 | 79 | 38 | 0 | 270 | 348 | 227 | 305 | 4.86e-25 | 111 |
Msa0693770 | AT2G23140.1 | 47.405 | 289 | 151 | 1 | 359 | 647 | 532 | 819 | 6.34e-70 | 243 |
Msa0693770 | AT2G23140.1 | 51.899 | 79 | 38 | 0 | 270 | 348 | 230 | 308 | 4.97e-25 | 111 |
Msa0693770 | AT5G67340.1 | 34.839 | 465 | 214 | 9 | 273 | 651 | 240 | 701 | 7.02e-70 | 241 |
Msa0693770 | AT5G67340.2 | 34.839 | 465 | 214 | 9 | 273 | 651 | 240 | 701 | 7.02e-70 | 241 |
Msa0693770 | AT3G01400.1 | 45.848 | 277 | 149 | 1 | 373 | 648 | 64 | 340 | 1.01e-67 | 226 |
Msa0693770 | AT5G58680.1 | 44.245 | 278 | 153 | 2 | 373 | 648 | 62 | 339 | 4.20e-64 | 216 |
Msa0693770 | AT5G01830.1 | 30.781 | 640 | 366 | 21 | 39 | 648 | 53 | 645 | 6.77e-64 | 224 |
Msa0693770 | AT3G54790.2 | 46.718 | 259 | 136 | 2 | 390 | 647 | 455 | 712 | 4.73e-59 | 211 |
Msa0693770 | AT3G54790.2 | 50.000 | 70 | 35 | 0 | 270 | 339 | 199 | 268 | 6.27e-19 | 91.7 |
Msa0693770 | AT5G18320.1 | 36.160 | 401 | 209 | 13 | 273 | 649 | 72 | 449 | 5.80e-59 | 205 |
Msa0693770 | AT3G54790.3 | 46.718 | 259 | 136 | 2 | 390 | 647 | 491 | 748 | 1.01e-58 | 211 |
Msa0693770 | AT3G54790.3 | 50.000 | 70 | 35 | 0 | 270 | 339 | 235 | 304 | 8.77e-19 | 91.3 |
Msa0693770 | AT3G54790.1 | 46.718 | 259 | 136 | 2 | 390 | 647 | 491 | 748 | 1.01e-58 | 211 |
Msa0693770 | AT3G54790.1 | 50.000 | 70 | 35 | 0 | 270 | 339 | 235 | 304 | 8.77e-19 | 91.3 |
Msa0693770 | AT4G16490.1 | 45.038 | 262 | 142 | 1 | 389 | 648 | 201 | 462 | 3.45e-56 | 198 |
Msa0693770 | AT1G27910.1 | 29.861 | 432 | 249 | 9 | 272 | 651 | 278 | 707 | 1.43e-46 | 176 |
Msa0693770 | AT1G24330.1 | 28.425 | 489 | 272 | 12 | 222 | 648 | 234 | 706 | 4.34e-46 | 175 |
Msa0693770 | AT1G24330.2 | 28.425 | 489 | 272 | 12 | 222 | 648 | 234 | 706 | 4.34e-46 | 175 |
Msa0693770 | AT1G67530.2 | 29.825 | 456 | 246 | 13 | 259 | 651 | 266 | 710 | 4.25e-44 | 169 |
Msa0693770 | AT1G67530.1 | 29.825 | 456 | 246 | 13 | 259 | 651 | 266 | 710 | 4.25e-44 | 169 |
Msa0693770 | AT1G67530.4 | 29.825 | 456 | 246 | 13 | 259 | 651 | 266 | 710 | 4.25e-44 | 169 |
Msa0693770 | AT3G07360.5 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.40e-43 | 159 |
Msa0693770 | AT3G07360.3 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.40e-43 | 159 |
Msa0693770 | AT3G07360.9 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.40e-43 | 159 |
Msa0693770 | AT3G07360.6 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.40e-43 | 159 |
Msa0693770 | AT3G07360.2 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.40e-43 | 159 |
Msa0693770 | AT3G07360.8 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.40e-43 | 159 |
Msa0693770 | AT3G07360.10 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.40e-43 | 159 |
Msa0693770 | AT3G07360.7 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.40e-43 | 159 |
Msa0693770 | AT3G07360.4 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.40e-43 | 159 |
Msa0693770 | AT4G21350.1 | 31.043 | 393 | 228 | 7 | 270 | 646 | 2 | 367 | 1.87e-41 | 155 |
Msa0693770 | AT5G18330.1 | 31.564 | 358 | 214 | 13 | 264 | 606 | 52 | 393 | 1.26e-39 | 151 |
Msa0693770 | AT1G60190.1 | 26.596 | 658 | 394 | 22 | 41 | 651 | 52 | 667 | 5.46e-39 | 153 |
Msa0693770 | AT3G19380.1 | 32.184 | 348 | 218 | 8 | 271 | 605 | 12 | 354 | 1.92e-37 | 145 |
Msa0693770 | AT1G49780.1 | 31.818 | 396 | 245 | 9 | 270 | 647 | 11 | 399 | 2.45e-36 | 142 |
Msa0693770 | AT1G10560.1 | 25.578 | 649 | 409 | 20 | 48 | 651 | 59 | 678 | 1.16e-35 | 143 |
Msa0693770 | AT5G18340.1 | 30.571 | 350 | 211 | 14 | 270 | 601 | 71 | 406 | 2.16e-34 | 137 |
Msa0693770 | AT5G62560.1 | 32.258 | 279 | 182 | 3 | 374 | 647 | 237 | 513 | 1.89e-33 | 135 |
Msa0693770 | AT5G40140.1 | 30.576 | 278 | 187 | 3 | 374 | 647 | 231 | 506 | 4.53e-31 | 128 |
Msa0693770 | AT5G65200.1 | 30.769 | 286 | 185 | 4 | 374 | 648 | 227 | 510 | 5.73e-31 | 128 |
Msa0693770 | AT5G37490.1 | 24.292 | 424 | 290 | 11 | 248 | 652 | 6 | 417 | 3.01e-27 | 115 |
Msa0693770 | AT2G35930.1 | 29.592 | 294 | 179 | 10 | 269 | 549 | 8 | 286 | 3.26e-26 | 112 |
Msa0693770 | AT4G31890.3 | 34.545 | 275 | 164 | 8 | 387 | 647 | 156 | 428 | 3.61e-26 | 113 |
Msa0693770 | AT4G31890.2 | 34.545 | 275 | 164 | 8 | 387 | 647 | 156 | 428 | 3.61e-26 | 113 |
Msa0693770 | AT4G31890.1 | 34.545 | 275 | 164 | 8 | 387 | 647 | 156 | 428 | 3.61e-26 | 113 |
Msa0693770 | AT5G65920.1 | 26.357 | 387 | 246 | 12 | 273 | 644 | 60 | 422 | 1.96e-25 | 110 |
Msa0693770 | AT5G65920.2 | 26.357 | 387 | 246 | 12 | 273 | 644 | 60 | 422 | 1.96e-25 | 110 |
Msa0693770 | AT3G47820.1 | 28.975 | 283 | 189 | 6 | 374 | 647 | 208 | 487 | 2.68e-24 | 107 |
Msa0693770 | AT1G66160.1 | 26.650 | 409 | 244 | 16 | 271 | 652 | 31 | 410 | 3.51e-24 | 106 |
Msa0693770 | AT3G49810.1 | 25.316 | 395 | 256 | 10 | 265 | 644 | 56 | 426 | 4.29e-24 | 106 |
Msa0693770 | AT1G67530.3 | 48.913 | 92 | 39 | 1 | 259 | 350 | 266 | 349 | 8.90e-24 | 106 |
Msa0693770 | AT4G12710.1 | 31.835 | 267 | 173 | 5 | 391 | 648 | 65 | 331 | 5.54e-23 | 102 |
Msa0693770 | AT1G08315.1 | 34.146 | 246 | 149 | 8 | 373 | 606 | 9 | 253 | 1.29e-22 | 99.8 |
Msa0693770 | AT5G09800.1 | 26.211 | 351 | 224 | 12 | 273 | 605 | 11 | 344 | 9.32e-22 | 98.6 |
Msa0693770 | AT5G64660.1 | 26.959 | 319 | 192 | 12 | 265 | 579 | 1 | 282 | 3.32e-21 | 97.1 |
Msa0693770 | AT3G52450.1 | 26.705 | 352 | 193 | 13 | 271 | 574 | 5 | 339 | 2.21e-20 | 94.7 |
Msa0693770 | AT2G25130.1 | 30.855 | 269 | 168 | 8 | 393 | 647 | 131 | 395 | 7.67e-20 | 93.6 |
Msa0693770 | AT3G18710.1 | 27.160 | 324 | 197 | 14 | 271 | 573 | 10 | 315 | 4.62e-18 | 87.4 |
Msa0693770 | AT3G03440.1 | 31.071 | 280 | 181 | 6 | 378 | 647 | 68 | 345 | 8.08e-18 | 86.7 |
Msa0693770 | AT4G36550.1 | 44.595 | 74 | 41 | 0 | 273 | 346 | 219 | 292 | 5.12e-17 | 85.5 |
Msa0693770 | AT1G76390.1 | 25.816 | 337 | 182 | 13 | 273 | 542 | 25 | 360 | 3.81e-15 | 79.7 |
Msa0693770 | AT1G76390.2 | 25.816 | 337 | 182 | 13 | 273 | 542 | 25 | 360 | 3.81e-15 | 79.7 |
Msa0693770 | AT1G66160.2 | 24.694 | 409 | 236 | 17 | 271 | 652 | 31 | 394 | 5.15e-15 | 78.2 |
Msa0693770 | AT3G11840.1 | 46.053 | 76 | 39 | 2 | 269 | 343 | 6 | 80 | 5.53e-15 | 78.2 |
Msa0693770 | AT2G45920.1 | 48.485 | 66 | 34 | 0 | 274 | 339 | 326 | 391 | 6.18e-15 | 77.8 |
Msa0693770 | AT1G01680.1 | 46.154 | 65 | 35 | 0 | 275 | 339 | 235 | 299 | 7.50e-15 | 76.3 |
Msa0693770 | AT1G01660.2 | 46.970 | 66 | 35 | 0 | 274 | 339 | 499 | 564 | 1.99e-14 | 77.0 |
Msa0693770 | AT1G01660.1 | 46.970 | 66 | 35 | 0 | 274 | 339 | 498 | 563 | 2.05e-14 | 77.0 |
Msa0693770 | AT5G50900.1 | 29.048 | 210 | 146 | 2 | 376 | 582 | 149 | 358 | 2.90e-14 | 76.6 |
Msa0693770 | AT1G56040.1 | 46.154 | 65 | 35 | 0 | 274 | 338 | 354 | 418 | 2.82e-13 | 72.8 |
Msa0693770 | AT3G61390.4 | 42.424 | 66 | 38 | 0 | 274 | 339 | 279 | 344 | 3.33e-13 | 72.0 |
Msa0693770 | AT3G61390.2 | 42.424 | 66 | 38 | 0 | 274 | 339 | 354 | 419 | 4.39e-13 | 72.4 |
Msa0693770 | AT5G65500.1 | 44.776 | 67 | 37 | 0 | 273 | 339 | 715 | 781 | 4.97e-13 | 72.8 |
Msa0693770 | AT5G65500.2 | 44.776 | 67 | 37 | 0 | 273 | 339 | 723 | 789 | 5.35e-13 | 72.8 |
Msa0693770 | AT3G20170.1 | 29.885 | 174 | 117 | 1 | 409 | 582 | 271 | 439 | 5.40e-13 | 72.0 |
Msa0693770 | AT5G57035.1 | 45.455 | 66 | 36 | 0 | 274 | 339 | 709 | 774 | 9.88e-13 | 72.0 |
Msa0693770 | AT2G45910.2 | 41.667 | 72 | 42 | 0 | 272 | 343 | 762 | 833 | 1.16e-12 | 71.6 |
Msa0693770 | AT2G45910.1 | 41.667 | 72 | 42 | 0 | 272 | 343 | 762 | 833 | 1.16e-12 | 71.6 |
Msa0693770 | AT1G01670.3 | 39.189 | 74 | 45 | 0 | 270 | 343 | 207 | 280 | 1.62e-12 | 68.9 |
Msa0693770 | AT5G13060.1 | 30.415 | 217 | 147 | 4 | 371 | 584 | 225 | 440 | 2.01e-12 | 70.9 |
Msa0693770 | AT1G20780.1 | 24.397 | 373 | 224 | 13 | 273 | 601 | 23 | 381 | 2.59e-12 | 70.5 |
Msa0693770 | AT1G20780.2 | 24.397 | 373 | 224 | 13 | 273 | 601 | 23 | 381 | 2.59e-12 | 70.5 |
Msa0693770 | AT1G20780.3 | 24.397 | 373 | 224 | 13 | 273 | 601 | 23 | 381 | 2.59e-12 | 70.5 |
Msa0693770 | AT1G01670.2 | 39.189 | 74 | 45 | 0 | 270 | 343 | 291 | 364 | 2.79e-12 | 69.3 |
Msa0693770 | AT1G01670.1 | 39.189 | 74 | 45 | 0 | 270 | 343 | 291 | 364 | 2.79e-12 | 69.3 |
Msa0693770 | AT1G56030.1 | 43.077 | 65 | 37 | 0 | 274 | 338 | 324 | 388 | 3.11e-12 | 69.3 |
Msa0693770 | AT2G19410.3 | 46.970 | 66 | 34 | 1 | 274 | 339 | 712 | 776 | 5.20e-12 | 69.7 |
Msa0693770 | AT2G19410.2 | 46.970 | 66 | 34 | 1 | 274 | 339 | 747 | 811 | 5.65e-12 | 69.7 |
Msa0693770 | AT2G19410.1 | 46.970 | 66 | 34 | 1 | 274 | 339 | 726 | 790 | 5.88e-12 | 69.3 |
Msa0693770 | AT2G44900.1 | 27.513 | 189 | 133 | 2 | 368 | 552 | 564 | 752 | 1.11e-11 | 68.6 |
Msa0693770 | AT2G44900.2 | 27.513 | 189 | 133 | 2 | 368 | 552 | 564 | 752 | 1.11e-11 | 68.6 |
Msa0693770 | AT1G68940.3 | 25.697 | 323 | 201 | 11 | 277 | 588 | 250 | 544 | 3.88e-11 | 67.0 |
Msa0693770 | AT3G49060.1 | 38.043 | 92 | 50 | 2 | 250 | 339 | 715 | 801 | 3.98e-11 | 67.0 |
Msa0693770 | AT3G49060.3 | 38.043 | 92 | 50 | 2 | 250 | 339 | 682 | 768 | 4.03e-11 | 66.6 |
Msa0693770 | AT3G49060.2 | 38.043 | 92 | 50 | 2 | 250 | 339 | 705 | 791 | 4.06e-11 | 66.6 |
Msa0693770 | AT1G68940.2 | 25.697 | 323 | 201 | 11 | 277 | 588 | 303 | 597 | 4.12e-11 | 67.0 |
Msa0693770 | AT1G68940.1 | 25.697 | 323 | 201 | 11 | 277 | 588 | 303 | 597 | 5.32e-11 | 66.6 |
Find 170 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAGAAATTTCTTGACTTTC+AGG | 0.038417 | 4_4:+62905972 | None:intergenic |
AGATAAATATATTAACTTTA+AGG | 0.166456 | 4_4:+62904642 | None:intergenic |
TCCCTCTAAGACTTCCATTT+TGG | 0.189510 | 4_4:+62905111 | None:intergenic |
CCTGAAAGTCAAGAAATTTC+TGG | 0.194581 | 4_4:-62905972 | Msa0693770:CDS |
ACGGAAGGCTACTTCATTAT+TGG | 0.201892 | 4_4:-62904715 | Msa0693770:CDS |
CCTATTGTCGGTGCTTCTTT+TGG | 0.222155 | 4_4:+62905427 | None:intergenic |
AGGCTCCTTAGAACATAATT+TGG | 0.270405 | 4_4:+62905641 | None:intergenic |
TTACATCTTCTGAAGTTAAA+AGG | 0.270561 | 4_4:+62905363 | None:intergenic |
TCAGCGCGTGACGTGGAAAT+TGG | 0.296094 | 4_4:-62906457 | Msa0693770:CDS |
TGTGATGATCCCTGCCCTTA+TGG | 0.298109 | 4_4:+62905028 | None:intergenic |
TATCCGTTGCTCGTCTCAAT+TGG | 0.303027 | 4_4:+62906252 | None:intergenic |
CTCACTTGTTCGAAGAGATT+AGG | 0.316920 | 4_4:-62907041 | Msa0693770:CDS |
TGATTTCTTGAGCCAGGGGC+TGG | 0.320586 | 4_4:+62906186 | None:intergenic |
AAACTGAAAGATAATCTTCT+TGG | 0.322536 | 4_4:+62906479 | None:intergenic |
TCACCGGCCATTGTATTTGC+TGG | 0.324513 | 4_4:+62907216 | None:intergenic |
GTTAAAAGGTTGACTAAAAC+TGG | 0.330673 | 4_4:+62905377 | None:intergenic |
TCACTTGTTCGAAGAGATTA+GGG | 0.331735 | 4_4:-62907040 | Msa0693770:CDS |
TCCTCCTCCGGCGCACATTC+CGG | 0.332335 | 4_4:+62907143 | None:intergenic |
TTACACCAAATTATGTTCTA+AGG | 0.332391 | 4_4:-62905646 | Msa0693770:CDS |
CAGTTTACCGTATGACGATT+TGG | 0.342582 | 4_4:-62906421 | Msa0693770:CDS |
CTCATTAGCTCCAACGATAT+AGG | 0.343106 | 4_4:+62905885 | None:intergenic |
TGGTGCCGTCATACCTCTTT+CGG | 0.345816 | 4_4:-62904769 | Msa0693770:CDS |
AGAGATTAGGGAGCTGAATA+AGG | 0.352818 | 4_4:-62907028 | Msa0693770:CDS |
CTCAAAAGATCTATTAAAAC+TGG | 0.352987 | 4_4:+62904885 | None:intergenic |
TTAGAACATAATTTGGTGTA+AGG | 0.358392 | 4_4:+62905648 | None:intergenic |
CTCCAAAATGGAAGTCTTAG+AGG | 0.362705 | 4_4:-62905113 | Msa0693770:CDS |
CTCTTTGTTGCGAGGCAATC+CGG | 0.366637 | 4_4:+62904860 | None:intergenic |
TCATTAGCTCCAACGATATA+GGG | 0.368285 | 4_4:+62905886 | None:intergenic |
TGGAAACCTTTGCCTCTTGA+TGG | 0.369775 | 4_4:+62904928 | None:intergenic |
TTCAATTTATGTATATATCA+AGG | 0.380676 | 4_4:-62905065 | Msa0693770:CDS |
TTGGTAGATTTGCTCCAAAA+TGG | 0.381246 | 4_4:-62905125 | Msa0693770:CDS |
GAAAGAAGAAAAGAATTAAC+TGG | 0.381898 | 4_4:+62904532 | None:intergenic |
CTTGCACAAAGCAAGTAAAA+TGG | 0.385872 | 4_4:+62904827 | None:intergenic |
TGACCAGTGGCCACAATAAC+GGG | 0.386961 | 4_4:+62905858 | None:intergenic |
CAAGAAATCAGTCAGGTTCT+TGG | 0.388483 | 4_4:-62906173 | Msa0693770:CDS |
CGATTCTGCTTCGAGTTCTT+CGG | 0.397176 | 4_4:-62907001 | Msa0693770:CDS |
CGTTATTGTGGCCACTGGTC+AGG | 0.400672 | 4_4:-62905856 | Msa0693770:intron |
CCAAAAGAAGCACCGACAAT+AGG | 0.409476 | 4_4:-62905427 | Msa0693770:CDS |
AAGGGACTTATAATGCTTGC+TGG | 0.410944 | 4_4:-62905284 | Msa0693770:CDS |
AGCAATTAGTATCCTATTGT+CGG | 0.419305 | 4_4:+62905415 | None:intergenic |
ATCCGTTGCTCGTCTCAATT+GGG | 0.425234 | 4_4:+62906253 | None:intergenic |
TCAGGAATTACAATTGCATC+AGG | 0.426308 | 4_4:+62905921 | None:intergenic |
GATTTCTTGAGCCAGGGGCT+GGG | 0.426469 | 4_4:+62906187 | None:intergenic |
CTGAAAGTCAAGAAATTTCT+GGG | 0.428562 | 4_4:-62905971 | Msa0693770:CDS |
TGCTTCGAGTTCTTCGGTTA+CGG | 0.434500 | 4_4:-62906995 | Msa0693770:CDS |
CTCAGGAGCTATATCTGCTT+TGG | 0.437435 | 4_4:-62905144 | Msa0693770:CDS |
CTTTCGGAACTTGCTAGAAC+TGG | 0.439109 | 4_4:-62904753 | Msa0693770:CDS |
GAACAAGGGCAGAGCCATAA+GGG | 0.442885 | 4_4:-62905042 | Msa0693770:CDS |
GATGAGAACAAAATAATCAT+TGG | 0.443072 | 4_4:-62905170 | Msa0693770:CDS |
AAAATAATCATTGGAGCCTC+AGG | 0.443695 | 4_4:-62905161 | Msa0693770:CDS |
AACCTTTGCCTCTTGATGGC+TGG | 0.444911 | 4_4:+62904932 | None:intergenic |
CCTGACTGATTTCTTGAGCC+AGG | 0.449242 | 4_4:+62906180 | None:intergenic |
ATAGGGCAAAGAAAATCTTC+AGG | 0.449853 | 4_4:+62905903 | None:intergenic |
CTCTCCTGTATCAGTAGACT+TGG | 0.451352 | 4_4:-62904789 | Msa0693770:CDS |
TGGAAGTCTTAGAGGGAAGA+AGG | 0.455734 | 4_4:-62905105 | Msa0693770:CDS |
CTGACCAGTGGCCACAATAA+CGG | 0.457070 | 4_4:+62905857 | None:intergenic |
CAAGAACTGACATTATTGTA+AGG | 0.458400 | 4_4:+62904955 | None:intergenic |
AACCGAGATCCTGCTGCAAA+CGG | 0.459758 | 4_4:+62906053 | None:intergenic |
CTGACCTGCAGGAAAGCTTC+CGG | 0.460846 | 4_4:+62905492 | None:intergenic |
TTTCCGTTGGTTAGTCCTGT+AGG | 0.462136 | 4_4:+62905581 | None:intergenic |
GAACATTGCATCGGCGGTGA+TGG | 0.464055 | 4_4:+62907107 | None:intergenic |
CAAACTGATCAGATCAATTG+AGG | 0.464066 | 4_4:-62904583 | Msa0693770:three_prime_UTR |
AGCATTCCTAAAAGTAATGA+AGG | 0.464710 | 4_4:-62906089 | Msa0693770:CDS |
AGGATACTAATTGCTGAAGC+TGG | 0.467489 | 4_4:-62905407 | Msa0693770:CDS |
GGATCGTTCAGAGATGTTAC+AGG | 0.468224 | 4_4:-62905542 | Msa0693770:CDS |
GAGCTCCGGCGTGTTGTCTC+CGG | 0.469715 | 4_4:+62907188 | None:intergenic |
CTCGGAAGAAGTCAAAGAAC+AGG | 0.471166 | 4_4:-62906394 | Msa0693770:intron |
CTATATCGTTGGAGCTAATG+AGG | 0.476241 | 4_4:-62905884 | Msa0693770:CDS |
TGAATTAAGCACAGGAGCTC+CGG | 0.479194 | 4_4:+62907174 | None:intergenic |
GGAACAAGGGCAGAGCCATA+AGG | 0.479718 | 4_4:-62905043 | Msa0693770:CDS |
GGAATGTGCGCCGGAGGAGG+AGG | 0.480673 | 4_4:-62907141 | Msa0693770:CDS |
AGCTGCAACCCGTTTGCAGC+AGG | 0.482955 | 4_4:-62906062 | Msa0693770:CDS |
ACCCGTTTGCAGCAGGATCT+CGG | 0.482980 | 4_4:-62906055 | Msa0693770:CDS |
GCACTCCTCAACTGACCTGC+AGG | 0.484384 | 4_4:+62905481 | None:intergenic |
ACCGGAATGTGCGCCGGAGG+AGG | 0.486502 | 4_4:-62907144 | Msa0693770:CDS |
ACCGAGATCCTGCTGCAAAC+GGG | 0.489778 | 4_4:+62906054 | None:intergenic |
AGCTCGGAGGACTTGAACAA+TGG | 0.490269 | 4_4:+62905250 | None:intergenic |
CCTGAAAATCTATCGGAACT+AGG | 0.494469 | 4_4:-62906113 | Msa0693770:CDS |
GGAAGAATCGCCTCCTCCTC+CGG | 0.496609 | 4_4:+62907131 | None:intergenic |
GTCAAGAAATTTCTGGGAGT+GGG | 0.498309 | 4_4:-62905965 | Msa0693770:CDS |
AGTCAAGAAATTTCTGGGAG+TGG | 0.500581 | 4_4:-62905966 | Msa0693770:CDS |
TAATGAAGTAGCCTTCCGTT+TGG | 0.503664 | 4_4:+62904719 | None:intergenic |
GGCACCAAGTCTACTGATAC+AGG | 0.505124 | 4_4:+62904785 | None:intergenic |
TTTCGAATTCAGAGGATTCG+TGG | 0.507183 | 4_4:-62906972 | Msa0693770:CDS |
AAGGGCAGAGCCATAAGGGC+AGG | 0.511128 | 4_4:-62905038 | Msa0693770:CDS |
AGACGAGCAACGGATAAATA+CGG | 0.513807 | 4_4:-62906245 | Msa0693770:CDS |
ATTGTTCAAGTCCTCCGAGC+TGG | 0.515684 | 4_4:-62905248 | Msa0693770:CDS |
TATTAAAACTGGTATAGTGC+TGG | 0.519102 | 4_4:+62904896 | None:intergenic |
CACAGATTCGAGCAAATCAA+TGG | 0.520172 | 4_4:-62904988 | Msa0693770:CDS |
TAGAACATAATTTGGTGTAA+GGG | 0.520468 | 4_4:+62905649 | None:intergenic |
AGAGATCCGTCGAACTAGAT+CGG | 0.522109 | 4_4:+62907071 | None:intergenic |
GTTCTAGCAAGTTCCGAAAG+AGG | 0.522552 | 4_4:+62904756 | None:intergenic |
TTCAGTTTCAGCGCGTGACG+TGG | 0.525877 | 4_4:-62906464 | Msa0693770:CDS |
TGCCAGCCATCAAGAGGCAA+AGG | 0.525971 | 4_4:-62904934 | Msa0693770:CDS |
TCAATTTATGTATATATCAA+GGG | 0.531108 | 4_4:-62905064 | Msa0693770:CDS |
CGGAGGACTTGAACAATGGA+TGG | 0.531661 | 4_4:+62905254 | None:intergenic |
CGCCGATGCAATGTTCAGAA+AGG | 0.532617 | 4_4:-62907100 | Msa0693770:CDS |
TTGCTTCCATGGTTCCAGCT+CGG | 0.533674 | 4_4:+62905234 | None:intergenic |
CTGACTGATTTCTTGAGCCA+GGG | 0.534115 | 4_4:+62906181 | None:intergenic |
CACAACATCGAGCAACCTAC+AGG | 0.539474 | 4_4:-62905596 | Msa0693770:CDS |
TGTTCTCATCCGCAAGTGAA+AGG | 0.539476 | 4_4:+62905183 | None:intergenic |
CTTTCTGAACATTGCATCGG+CGG | 0.540344 | 4_4:+62907101 | None:intergenic |
CAGCAATTGAAACTCTCGTC+CGG | 0.543348 | 4_4:-62905511 | Msa0693770:CDS |
ATCCTTTCTGAACATTGCAT+CGG | 0.545375 | 4_4:+62907098 | None:intergenic |
TGCTTAATTCACGACATCAC+CGG | 0.546924 | 4_4:-62907162 | Msa0693770:CDS |
CCATTGTATTTGCTGGATTG+TGG | 0.547440 | 4_4:+62907223 | None:intergenic |
GTTGTCTCCGGCGAACTCAC+CGG | 0.547717 | 4_4:+62907200 | None:intergenic |
AACTTTACACGCTGATACAG+AGG | 0.552438 | 4_4:+62904489 | None:intergenic |
CATTGCATCGGCGGTGATGG+AGG | 0.554742 | 4_4:+62907110 | None:intergenic |
TCGTCCGGAAGCTTTCCTGC+AGG | 0.555944 | 4_4:-62905496 | Msa0693770:CDS |
GCTGCGTTCTCTTTGTTGCG+AGG | 0.556404 | 4_4:+62904852 | None:intergenic |
AGTCCTCCGAGCTGGAACCA+TGG | 0.557782 | 4_4:-62905240 | Msa0693770:CDS |
GCTTTCCTGCAGGTCAGTTG+AGG | 0.557800 | 4_4:-62905486 | Msa0693770:CDS |
CGATAAGGAAACCTCGGAAG+AGG | 0.558738 | 4_4:+62906007 | None:intergenic |
GTTTGCAGCAGGATCTCGGT+TGG | 0.561113 | 4_4:-62906051 | Msa0693770:CDS |
ATGTATATATCAAGGGAACA+AGG | 0.561345 | 4_4:-62905057 | Msa0693770:CDS |
TAGCTGTCCTGAAAATCTAT+CGG | 0.562858 | 4_4:-62906120 | Msa0693770:CDS |
AACAACACTAACAAATCAAG+AGG | 0.564368 | 4_4:+62904413 | None:intergenic |
AATCCAGCAAATACAATGGC+CGG | 0.565831 | 4_4:-62907219 | Msa0693770:exon |
GACGAGCAACGGATAAATAC+GGG | 0.566709 | 4_4:-62906244 | Msa0693770:CDS |
ATCGATCCATCTCTGTATGT+AGG | 0.566858 | 4_4:+62905721 | None:intergenic |
AAGAACTGACATTATTGTAA+GGG | 0.567464 | 4_4:+62904956 | None:intergenic |
TTTACTTGCTTTGTGCAAGA+GGG | 0.567749 | 4_4:-62904823 | Msa0693770:CDS |
AATGAGGGATCCCGTTATTG+TGG | 0.571734 | 4_4:-62905868 | Msa0693770:CDS |
AGGAAACCTCGGAAGAGGCA+TGG | 0.571746 | 4_4:+62906012 | None:intergenic |
ATACAGAGATGGATCGATTG+TGG | 0.572889 | 4_4:-62905716 | Msa0693770:CDS |
GACATCACCGGAATGTGCGC+CGG | 0.573530 | 4_4:-62907150 | Msa0693770:CDS |
CCTGGCTCAAGAAATCAGTC+AGG | 0.580247 | 4_4:-62906180 | Msa0693770:CDS |
GTATGACGATTTGGATATCT+CGG | 0.583393 | 4_4:-62906412 | Msa0693770:CDS |
ATCACCGGAATGTGCGCCGG+AGG | 0.586557 | 4_4:-62907147 | Msa0693770:CDS |
CTGGTACAGAGCGAGCCAAA+CGG | 0.590641 | 4_4:-62904734 | Msa0693770:CDS |
TTTAATCGATAAGGAAACCT+CGG | 0.595093 | 4_4:+62906001 | None:intergenic |
TGATGTCGTGAATTAAGCAC+AGG | 0.596241 | 4_4:+62907166 | None:intergenic |
GATCCCGTTATTGTGGCCAC+TGG | 0.597895 | 4_4:-62905861 | Msa0693770:CDS |
TAAGGAGCCTTGTTTCTCAG+TGG | 0.598566 | 4_4:-62905628 | Msa0693770:CDS |
TTCTATATATGAAAACAACA+AGG | 0.600201 | 4_4:-62905303 | Msa0693770:CDS |
AGTTCTTGCCAGCCATCAAG+AGG | 0.603879 | 4_4:-62904940 | Msa0693770:CDS |
CAAAGCAGATATAGCTCCTG+AGG | 0.605504 | 4_4:+62905145 | None:intergenic |
TGACTGATTTCTTGAGCCAG+GGG | 0.608554 | 4_4:+62906182 | None:intergenic |
TACAACAGCTTTGAAATGCG+AGG | 0.610979 | 4_4:-62904677 | Msa0693770:exon |
AGCGATCCTACATACAGAGA+TGG | 0.611283 | 4_4:-62905727 | Msa0693770:CDS |
TCCAAAATGGAAGTCTTAGA+GGG | 0.612631 | 4_4:-62905112 | Msa0693770:CDS |
GAGTATCCATGCCTCTTCCG+AGG | 0.613423 | 4_4:-62906018 | Msa0693770:CDS |
CTATACACCACTGAGAAACA+AGG | 0.615168 | 4_4:+62905621 | None:intergenic |
GTTCTTGGCAAATCTGTGAG+TGG | 0.616724 | 4_4:-62906158 | Msa0693770:CDS |
AAGTTCCGAAAGAGGTATGA+CGG | 0.618372 | 4_4:+62904764 | None:intergenic |
GAGATATCCAAATCGTCATA+CGG | 0.619518 | 4_4:+62906414 | None:intergenic |
AACCCAATTGAGACGAGCAA+CGG | 0.621925 | 4_4:-62906255 | Msa0693770:CDS |
AAGAGCAAGCACTAGATCAG+AGG | 0.622188 | 4_4:+62906948 | None:intergenic |
GGCTGGGATGAATCAAAAGA+CGG | 0.622684 | 4_4:+62906203 | None:intergenic |
GGTTACGGTTTCGAATTCAG+AGG | 0.625095 | 4_4:-62906980 | Msa0693770:CDS |
CTTCCATGGTTCCAGCTCGG+AGG | 0.625169 | 4_4:+62905237 | None:intergenic |
CATGGAAGCAAGAGAAAACG+CGG | 0.632928 | 4_4:-62905222 | Msa0693770:CDS |
AGGGCAGAGCCATAAGGGCA+GGG | 0.634588 | 4_4:-62905037 | Msa0693770:CDS |
TATATCGTTGGAGCTAATGA+GGG | 0.638648 | 4_4:-62905883 | Msa0693770:CDS |
AAGAATTAACTGGATCAATG+AGG | 0.643213 | 4_4:+62904542 | None:intergenic |
TCTATATATGAAAACAACAA+GGG | 0.645718 | 4_4:-62905302 | Msa0693770:CDS |
TGTAATGACGCAAGAAAACG+CGG | 0.646941 | 4_4:-62905345 | Msa0693770:CDS |
TGTATATATCAAGGGAACAA+GGG | 0.653092 | 4_4:-62905056 | Msa0693770:CDS |
ACAATGGCCGGTGAGTTCGC+CGG | 0.654301 | 4_4:-62907207 | Msa0693770:CDS |
TACAGAGCGAGCCAAACGGA+AGG | 0.654338 | 4_4:-62904730 | Msa0693770:CDS |
GCATTCCTAAAAGTAATGAA+GGG | 0.656705 | 4_4:-62906088 | Msa0693770:CDS |
AGATTCTCAAGCATATAGCA+TGG | 0.658577 | 4_4:-62904369 | Msa0693770:three_prime_UTR |
CCACAATCCAGCAAATACAA+TGG | 0.669742 | 4_4:-62907223 | Msa0693770:exon |
CAACCTACAGGACTAACCAA+CGG | 0.675767 | 4_4:-62905584 | Msa0693770:CDS |
ATTGCACCGATCTAGTTCGA+CGG | 0.679587 | 4_4:-62907077 | Msa0693770:CDS |
GATCTCGGTTGGAAAGAACA+AGG | 0.680183 | 4_4:-62906040 | Msa0693770:CDS |
AATGAACTTTACCTGACCAG+TGG | 0.705145 | 4_4:+62905845 | None:intergenic |
AAGTCAGAGAGAGTCTAACG+AGG | 0.773986 | 4_4:+62907248 | None:intergenic |
GTTCGCCGGAGACAACACGC+CGG | 0.804108 | 4_4:-62907193 | Msa0693770:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGATAAATATATTAACTTTA+AGG | + | chr4_4:62907051-62907070 | None:intergenic | 10.0% |
!! | ATTTGATATATCTTGATTTA+AGG | - | chr4_4:62905179-62905198 | Msa0693770:CDS | 15.0% |
!! | ACATAAAAAATAATGAAACA+AGG | + | chr4_4:62905926-62905945 | None:intergenic | 15.0% |
!! | TTCAATTTATGTATATATCA+AGG | - | chr4_4:62906625-62906644 | Msa0693770:intron | 15.0% |
!! | TCAATTTATGTATATATCAA+GGG | - | chr4_4:62906626-62906645 | Msa0693770:intron | 15.0% |
!!! | ATTTGGAATTTTACTAATGA+TGG | - | chr4_4:62905111-62905130 | Msa0693770:CDS | 20.0% |
!! | AAAAAATAATGAAACAAGGT+TGG | + | chr4_4:62905922-62905941 | None:intergenic | 20.0% |
!!! | TGTTGTTTTCATATATAGAA+AGG | + | chr4_4:62906387-62906406 | None:intergenic | 20.0% |
!! | TTCTATATATGAAAACAACA+AGG | - | chr4_4:62906387-62906406 | Msa0693770:intron | 20.0% |
!! | TCTATATATGAAAACAACAA+GGG | - | chr4_4:62906388-62906407 | Msa0693770:intron | 20.0% |
!!! | TGACATAATTTTTCATACAT+TGG | - | chr4_4:62907080-62907099 | Msa0693770:CDS | 20.0% |
!! | TTCTAAGAGATTGTGTAATT+TGG | - | chr4_4:62905094-62905113 | Msa0693770:CDS | 25.0% |
!!! | TACTAATGATGGATTTTGTA+CGG | - | chr4_4:62905122-62905141 | Msa0693770:CDS | 25.0% |
! | AAACTGAAAGATAATCTTCT+TGG | + | chr4_4:62905214-62905233 | None:intergenic | 25.0% |
!!! | TGGTTTTTTTTTTGTCCTTT+TGG | - | chr4_4:62905336-62905355 | Msa0693770:CDS | 25.0% |
!!! | TAGAACATAATTTGGTGTAA+GGG | + | chr4_4:62906044-62906063 | None:intergenic | 25.0% |
!!! | TTAGAACATAATTTGGTGTA+AGG | + | chr4_4:62906045-62906064 | None:intergenic | 25.0% |
! | TTACACCAAATTATGTTCTA+AGG | - | chr4_4:62906044-62906063 | Msa0693770:CDS | 25.0% |
!!! | ACTCTTTTTTATTTTTCCGT+TGG | + | chr4_4:62906125-62906144 | None:intergenic | 25.0% |
! | GGAAAAATAAAAAAGAGTGA+TGG | - | chr4_4:62906127-62906146 | Msa0693770:CDS | 25.0% |
!!! | TTACATCTTCTGAAGTTAAA+AGG | + | chr4_4:62906330-62906349 | None:intergenic | 25.0% |
! | GATGAGAACAAAATAATCAT+TGG | - | chr4_4:62906520-62906539 | Msa0693770:intron | 25.0% |
! | AAGAACTGACATTATTGTAA+GGG | + | chr4_4:62906737-62906756 | None:intergenic | 25.0% |
! | CTCAAAAGATCTATTAAAAC+TGG | + | chr4_4:62906808-62906827 | None:intergenic | 25.0% |
!!! | CAGTTTTAATAGATCTTTTG+AGG | - | chr4_4:62906806-62906825 | Msa0693770:intron | 25.0% |
! | GAAAGAAGAAAAGAATTAAC+TGG | + | chr4_4:62907161-62907180 | None:intergenic | 25.0% |
!! | GATCTTAAGCTCGTTTTATT+TGG | - | chr4_4:62904832-62904851 | Msa0693770:CDS | 30.0% |
!!! | ACTAATGATGGATTTTGTAC+GGG | - | chr4_4:62905123-62905142 | Msa0693770:CDS | 30.0% |
AGGTAGAATTTGGTTAAATG+TGG | - | chr4_4:62905316-62905335 | Msa0693770:CDS | 30.0% | |
!! | CTGATATTGTCTACTTTTCT+AGG | - | chr4_4:62905399-62905418 | Msa0693770:CDS | 30.0% |
!! | ATATTGTCTACTTTTCTAGG+TGG | - | chr4_4:62905402-62905421 | Msa0693770:CDS | 30.0% |
AGCATTCCTAAAAGTAATGA+AGG | - | chr4_4:62905601-62905620 | Msa0693770:CDS | 30.0% | |
GCATTCCTAAAAGTAATGAA+GGG | - | chr4_4:62905602-62905621 | Msa0693770:CDS | 30.0% | |
!! | CTTTTCCCTTCATTACTTTT+AGG | + | chr4_4:62905610-62905629 | None:intergenic | 30.0% |
TTTAATCGATAAGGAAACCT+CGG | + | chr4_4:62905692-62905711 | None:intergenic | 30.0% | |
CTGAAAGTCAAGAAATTTCT+GGG | - | chr4_4:62905719-62905738 | Msa0693770:CDS | 30.0% | |
! | GGTAAAGTTCATTTTAGATG+AGG | - | chr4_4:62905855-62905874 | Msa0693770:intron | 30.0% |
AGCAATTAGTATCCTATTGT+CGG | + | chr4_4:62906278-62906297 | None:intergenic | 30.0% | |
GTTAAAAGGTTGACTAAAAC+TGG | + | chr4_4:62906316-62906335 | None:intergenic | 30.0% | |
ATGTATATATCAAGGGAACA+AGG | - | chr4_4:62906633-62906652 | Msa0693770:intron | 30.0% | |
TGTATATATCAAGGGAACAA+GGG | - | chr4_4:62906634-62906653 | Msa0693770:intron | 30.0% | |
CAAGAACTGACATTATTGTA+AGG | + | chr4_4:62906738-62906757 | None:intergenic | 30.0% | |
TATTAAAACTGGTATAGTGC+TGG | + | chr4_4:62906797-62906816 | None:intergenic | 30.0% | |
!! | TTAATAGATCTTTTGAGGAC+CGG | - | chr4_4:62906811-62906830 | Msa0693770:intron | 30.0% |
AAGAATTAACTGGATCAATG+AGG | + | chr4_4:62907151-62907170 | None:intergenic | 30.0% | |
GGTTGAAAAAGAACAATACA+GGG | + | chr4_4:62907183-62907202 | None:intergenic | 30.0% | |
AGGTTGAAAAAGAACAATAC+AGG | + | chr4_4:62907184-62907203 | None:intergenic | 30.0% | |
AACAACACTAACAAATCAAG+AGG | + | chr4_4:62907280-62907299 | None:intergenic | 30.0% | |
! | GAGGTTTTTGATGAGACTTA+TGG | + | chr4_4:62904426-62904445 | None:intergenic | 35.0% |
ATCCTTTCTGAACATTGCAT+CGG | + | chr4_4:62904595-62904614 | None:intergenic | 35.0% | |
TCACTTGTTCGAAGAGATTA+GGG | - | chr4_4:62904650-62904669 | Msa0693770:three_prime_UTR | 35.0% | |
ACAAACAAATCGAAACGACA+AGG | + | chr4_4:62904951-62904970 | None:intergenic | 35.0% | |
CAACATAGAGGAATACACAT+GGG | + | chr4_4:62905024-62905043 | None:intergenic | 35.0% | |
ACAACATAGAGGAATACACA+TGG | + | chr4_4:62905025-62905044 | None:intergenic | 35.0% | |
ATGTGTATTCCTCTATGTTG+TGG | - | chr4_4:62905024-62905043 | Msa0693770:CDS | 35.0% | |
GAGATATCCAAATCGTCATA+CGG | + | chr4_4:62905279-62905298 | None:intergenic | 35.0% | |
! | GTATGACGATTTGGATATCT+CGG | - | chr4_4:62905278-62905297 | Msa0693770:CDS | 35.0% |
GTCAAAGAACAGGTAGAATT+TGG | - | chr4_4:62905306-62905325 | Msa0693770:CDS | 35.0% | |
GACAATATCGTCAATCCAAA+AGG | + | chr4_4:62905354-62905373 | None:intergenic | 35.0% | |
!! | TCTACTTTTCTAGGTGGATT+TGG | - | chr4_4:62905408-62905427 | Msa0693770:CDS | 35.0% |
TAGCTGTCCTGAAAATCTAT+CGG | - | chr4_4:62905570-62905589 | Msa0693770:CDS | 35.0% | |
!! | AGGAGCAGTTTTAATCGATA+AGG | + | chr4_4:62905701-62905720 | None:intergenic | 35.0% |
CCAGAAATTTCTTGACTTTC+AGG | + | chr4_4:62905721-62905740 | None:intergenic | 35.0% | |
CCTGAAAGTCAAGAAATTTC+TGG | - | chr4_4:62905718-62905737 | Msa0693770:CDS | 35.0% | |
TCAGGAATTACAATTGCATC+AGG | + | chr4_4:62905772-62905791 | None:intergenic | 35.0% | |
ATAGGGCAAAGAAAATCTTC+AGG | + | chr4_4:62905790-62905809 | None:intergenic | 35.0% | |
! | TTTTCTTTGCCCTATATCGT+TGG | - | chr4_4:62905795-62905814 | Msa0693770:intron | 35.0% |
TCATTAGCTCCAACGATATA+GGG | + | chr4_4:62905807-62905826 | None:intergenic | 35.0% | |
TATATCGTTGGAGCTAATGA+GGG | - | chr4_4:62905807-62905826 | Msa0693770:intron | 35.0% | |
! | TGAAGTTTCTGCTGAGTTTT+CGG | + | chr4_4:62906013-62906032 | None:intergenic | 35.0% |
AGGCTCCTTAGAACATAATT+TGG | + | chr4_4:62906052-62906071 | None:intergenic | 35.0% | |
!! | TCTTTTTAGCCTTTCACTTG+CGG | - | chr4_4:62906498-62906517 | Msa0693770:intron | 35.0% |
AAAATAATCATTGGAGCCTC+AGG | - | chr4_4:62906529-62906548 | Msa0693770:intron | 35.0% | |
! | TTGGTAGATTTGCTCCAAAA+TGG | - | chr4_4:62906565-62906584 | Msa0693770:intron | 35.0% |
TCCAAAATGGAAGTCTTAGA+GGG | - | chr4_4:62906578-62906597 | Msa0693770:intron | 35.0% | |
!!! | TATAGTGCTGGCTTTTACAA+TGG | + | chr4_4:62906785-62906804 | None:intergenic | 35.0% |
CTTGCACAAAGCAAGTAAAA+TGG | + | chr4_4:62906866-62906885 | None:intergenic | 35.0% | |
! | TTTTACTTGCTTTGTGCAAG+AGG | - | chr4_4:62906866-62906885 | Msa0693770:intron | 35.0% |
TTTACTTGCTTTGTGCAAGA+GGG | - | chr4_4:62906867-62906886 | Msa0693770:intron | 35.0% | |
CAAACTGATCAGATCAATTG+AGG | - | chr4_4:62907107-62907126 | Msa0693770:CDS | 35.0% | |
AGATTCTCAAGCATATAGCA+TGG | - | chr4_4:62907321-62907340 | Msa0693770:five_prime_UTR | 35.0% | |
! | CCATTGTATTTGCTGGATTG+TGG | + | chr4_4:62904470-62904489 | None:intergenic | 40.0% |
CCACAATCCAGCAAATACAA+TGG | - | chr4_4:62904467-62904486 | Msa0693770:three_prime_UTR | 40.0% | |
AATCCAGCAAATACAATGGC+CGG | - | chr4_4:62904471-62904490 | Msa0693770:three_prime_UTR | 40.0% | |
TGATGTCGTGAATTAAGCAC+AGG | + | chr4_4:62904527-62904546 | None:intergenic | 40.0% | |
TGCTTAATTCACGACATCAC+CGG | - | chr4_4:62904528-62904547 | Msa0693770:three_prime_UTR | 40.0% | |
CTCACTTGTTCGAAGAGATT+AGG | - | chr4_4:62904649-62904668 | Msa0693770:three_prime_UTR | 40.0% | |
AGAGATTAGGGAGCTGAATA+AGG | - | chr4_4:62904662-62904681 | Msa0693770:three_prime_UTR | 40.0% | |
TTTCGAATTCAGAGGATTCG+TGG | - | chr4_4:62904718-62904737 | Msa0693770:CDS | 40.0% | |
!!! | AAGCTCGTTTTATTTGGCTG+TGG | - | chr4_4:62904838-62904857 | Msa0693770:CDS | 40.0% |
CCAATACATCCACAACATAG+AGG | + | chr4_4:62905036-62905055 | None:intergenic | 40.0% | |
CCTCTATGTTGTGGATGTAT+TGG | - | chr4_4:62905033-62905052 | Msa0693770:CDS | 40.0% | |
CAGTTTACCGTATGACGATT+TGG | - | chr4_4:62905269-62905288 | Msa0693770:CDS | 40.0% | |
AGACGAGCAACGGATAAATA+CGG | - | chr4_4:62905445-62905464 | Msa0693770:CDS | 40.0% | |
CAAGAAATCAGTCAGGTTCT+TGG | - | chr4_4:62905517-62905536 | Msa0693770:CDS | 40.0% | |
! | CCTAGTTCCGATAGATTTTC+AGG | + | chr4_4:62905580-62905599 | None:intergenic | 40.0% |
CCTGAAAATCTATCGGAACT+AGG | - | chr4_4:62905577-62905596 | Msa0693770:CDS | 40.0% | |
! | AGTCAAGAAATTTCTGGGAG+TGG | - | chr4_4:62905724-62905743 | Msa0693770:CDS | 40.0% |
! | GTCAAGAAATTTCTGGGAGT+GGG | - | chr4_4:62905725-62905744 | Msa0693770:CDS | 40.0% |
!!! | GCATCAGGCTTTTTAACTTC+AGG | + | chr4_4:62905757-62905776 | None:intergenic | 40.0% |
CTCATTAGCTCCAACGATAT+AGG | + | chr4_4:62905808-62905827 | None:intergenic | 40.0% | |
CTATATCGTTGGAGCTAATG+AGG | - | chr4_4:62905806-62905825 | Msa0693770:intron | 40.0% | |
AATGAACTTTACCTGACCAG+TGG | + | chr4_4:62905848-62905867 | None:intergenic | 40.0% | |
ATCGATCCATCTCTGTATGT+AGG | + | chr4_4:62905972-62905991 | None:intergenic | 40.0% | |
ATACAGAGATGGATCGATTG+TGG | - | chr4_4:62905974-62905993 | Msa0693770:CDS | 40.0% | |
CTATACACCACTGAGAAACA+AGG | + | chr4_4:62906072-62906091 | None:intergenic | 40.0% | |
AGGATACTAATTGCTGAAGC+TGG | - | chr4_4:62906283-62906302 | Msa0693770:intron | 40.0% | |
TGTAATGACGCAAGAAAACG+CGG | - | chr4_4:62906345-62906364 | Msa0693770:intron | 40.0% | |
AAGGGACTTATAATGCTTGC+TGG | - | chr4_4:62906406-62906425 | Msa0693770:CDS | 40.0% | |
CTCCAAAATGGAAGTCTTAG+AGG | - | chr4_4:62906577-62906596 | Msa0693770:intron | 40.0% | |
!!! | TCCCTCTAAGACTTCCATTT+TGG | + | chr4_4:62906582-62906601 | None:intergenic | 40.0% |
CACAGATTCGAGCAAATCAA+TGG | - | chr4_4:62906702-62906721 | Msa0693770:intron | 40.0% | |
! | AAGTTCCGAAAGAGGTATGA+CGG | + | chr4_4:62906929-62906948 | None:intergenic | 40.0% |
TAATGAAGTAGCCTTCCGTT+TGG | + | chr4_4:62906974-62906993 | None:intergenic | 40.0% | |
ACGGAAGGCTACTTCATTAT+TGG | - | chr4_4:62906975-62906994 | Msa0693770:CDS | 40.0% | |
!! | TACAACAGCTTTGAAATGCG+AGG | - | chr4_4:62907013-62907032 | Msa0693770:CDS | 40.0% |
AACTTTACACGCTGATACAG+AGG | + | chr4_4:62907204-62907223 | None:intergenic | 40.0% | |
AAGTCAGAGAGAGTCTAACG+AGG | + | chr4_4:62904445-62904464 | None:intergenic | 45.0% | |
TGAATTAAGCACAGGAGCTC+CGG | + | chr4_4:62904519-62904538 | None:intergenic | 45.0% | |
CTTTCTGAACATTGCATCGG+CGG | + | chr4_4:62904592-62904611 | None:intergenic | 45.0% | |
! | ATTGCACCGATCTAGTTCGA+CGG | - | chr4_4:62904613-62904632 | Msa0693770:three_prime_UTR | 45.0% |
AGAGATCCGTCGAACTAGAT+CGG | + | chr4_4:62904622-62904641 | None:intergenic | 45.0% | |
! | CGATTCTGCTTCGAGTTCTT+CGG | - | chr4_4:62904689-62904708 | Msa0693770:CDS | 45.0% |
! | TGCTTCGAGTTCTTCGGTTA+CGG | - | chr4_4:62904695-62904714 | Msa0693770:CDS | 45.0% |
GGTTACGGTTTCGAATTCAG+AGG | - | chr4_4:62904710-62904729 | Msa0693770:CDS | 45.0% | |
AAGAGCAAGCACTAGATCAG+AGG | + | chr4_4:62904745-62904764 | None:intergenic | 45.0% | |
! | CTTGCATTTTGCGACATTGC+TGG | - | chr4_4:62904904-62904923 | Msa0693770:CDS | 45.0% |
CGACAAGGACAAAATCTCAG+TGG | + | chr4_4:62904936-62904955 | None:intergenic | 45.0% | |
CGGGCGTGTATATCTGTAAA+AGG | - | chr4_4:62905142-62905161 | Msa0693770:CDS | 45.0% | |
CTCGGAAGAAGTCAAAGAAC+AGG | - | chr4_4:62905296-62905315 | Msa0693770:CDS | 45.0% | |
AACCCAATTGAGACGAGCAA+CGG | - | chr4_4:62905435-62905454 | Msa0693770:CDS | 45.0% | |
ATCCGTTGCTCGTCTCAATT+GGG | + | chr4_4:62905440-62905459 | None:intergenic | 45.0% | |
TATCCGTTGCTCGTCTCAAT+TGG | + | chr4_4:62905441-62905460 | None:intergenic | 45.0% | |
GACGAGCAACGGATAAATAC+GGG | - | chr4_4:62905446-62905465 | Msa0693770:CDS | 45.0% | |
GGCTGGGATGAATCAAAAGA+CGG | + | chr4_4:62905490-62905509 | None:intergenic | 45.0% | |
! | TGACTGATTTCTTGAGCCAG+GGG | + | chr4_4:62905511-62905530 | None:intergenic | 45.0% |
! | CTGACTGATTTCTTGAGCCA+GGG | + | chr4_4:62905512-62905531 | None:intergenic | 45.0% |
GTTCTTGGCAAATCTGTGAG+TGG | - | chr4_4:62905532-62905551 | Msa0693770:CDS | 45.0% | |
GATCTCGGTTGGAAAGAACA+AGG | - | chr4_4:62905650-62905669 | Msa0693770:CDS | 45.0% | |
AATGAGGGATCCCGTTATTG+TGG | - | chr4_4:62905822-62905841 | Msa0693770:intron | 45.0% | |
AGCGATCCTACATACAGAGA+TGG | - | chr4_4:62905963-62905982 | Msa0693770:CDS | 45.0% | |
! | TTTCTGCTGAGTTTTCGGAC+AGG | + | chr4_4:62906008-62906027 | None:intergenic | 45.0% |
!! | TAAGGAGCCTTGTTTCTCAG+TGG | - | chr4_4:62906062-62906081 | Msa0693770:CDS | 45.0% |
CAACCTACAGGACTAACCAA+CGG | - | chr4_4:62906106-62906125 | Msa0693770:CDS | 45.0% | |
! | TTTCCGTTGGTTAGTCCTGT+AGG | + | chr4_4:62906112-62906131 | None:intergenic | 45.0% |
GGATCGTTCAGAGATGTTAC+AGG | - | chr4_4:62906148-62906167 | Msa0693770:CDS | 45.0% | |
CAGCAATTGAAACTCTCGTC+CGG | - | chr4_4:62906179-62906198 | Msa0693770:CDS | 45.0% | |
!! | CCTATTGTCGGTGCTTCTTT+TGG | + | chr4_4:62906266-62906285 | None:intergenic | 45.0% |
!! | CCAAAAGAAGCACCGACAAT+AGG | - | chr4_4:62906263-62906282 | Msa0693770:CDS | 45.0% |
CATGGAAGCAAGAGAAAACG+CGG | - | chr4_4:62906468-62906487 | Msa0693770:CDS | 45.0% | |
TGTTCTCATCCGCAAGTGAA+AGG | + | chr4_4:62906510-62906529 | None:intergenic | 45.0% | |
CAAAGCAGATATAGCTCCTG+AGG | + | chr4_4:62906548-62906567 | None:intergenic | 45.0% | |
CTCAGGAGCTATATCTGCTT+TGG | - | chr4_4:62906546-62906565 | Msa0693770:intron | 45.0% | |
TGGAAGTCTTAGAGGGAAGA+AGG | - | chr4_4:62906585-62906604 | Msa0693770:intron | 45.0% | |
TGGAAACCTTTGCCTCTTGA+TGG | + | chr4_4:62906765-62906784 | None:intergenic | 45.0% | |
CTCTCCTGTATCAGTAGACT+TGG | - | chr4_4:62906901-62906920 | Msa0693770:CDS | 45.0% | |
GTTCTAGCAAGTTCCGAAAG+AGG | + | chr4_4:62906937-62906956 | None:intergenic | 45.0% | |
!! | CTTTCGGAACTTGCTAGAAC+TGG | - | chr4_4:62906937-62906956 | Msa0693770:CDS | 45.0% |
TCACCGGCCATTGTATTTGC+TGG | + | chr4_4:62904477-62904496 | None:intergenic | 50.0% | |
CGCCGATGCAATGTTCAGAA+AGG | - | chr4_4:62904590-62904609 | Msa0693770:three_prime_UTR | 50.0% | |
!! | TTTTGATTCATCCCAGCCCC+TGG | - | chr4_4:62905492-62905511 | Msa0693770:CDS | 50.0% |
! | CCTGACTGATTTCTTGAGCC+AGG | + | chr4_4:62905513-62905532 | None:intergenic | 50.0% |
CCTGGCTCAAGAAATCAGTC+AGG | - | chr4_4:62905510-62905529 | Msa0693770:CDS | 50.0% | |
AACCGAGATCCTGCTGCAAA+CGG | + | chr4_4:62905640-62905659 | None:intergenic | 50.0% | |
CGATAAGGAAACCTCGGAAG+AGG | + | chr4_4:62905686-62905705 | None:intergenic | 50.0% | |
TGACCAGTGGCCACAATAAC+GGG | + | chr4_4:62905835-62905854 | None:intergenic | 50.0% | |
CTGACCAGTGGCCACAATAA+CGG | + | chr4_4:62905836-62905855 | None:intergenic | 50.0% | |
CACAACATCGAGCAACCTAC+AGG | - | chr4_4:62906094-62906113 | Msa0693770:CDS | 50.0% | |
CGGAGGACTTGAACAATGGA+TGG | + | chr4_4:62906439-62906458 | None:intergenic | 50.0% | |
AGCTCGGAGGACTTGAACAA+TGG | + | chr4_4:62906443-62906462 | None:intergenic | 50.0% | |
ATTGTTCAAGTCCTCCGAGC+TGG | - | chr4_4:62906442-62906461 | Msa0693770:CDS | 50.0% | |
TTGCTTCCATGGTTCCAGCT+CGG | + | chr4_4:62906459-62906478 | None:intergenic | 50.0% | |
! | CGCGTTTTCTCTTGCTTCCA+TGG | + | chr4_4:62906470-62906489 | None:intergenic | 50.0% |
GAACAAGGGCAGAGCCATAA+GGG | - | chr4_4:62906648-62906667 | Msa0693770:intron | 50.0% | |
TGTGATGATCCCTGCCCTTA+TGG | + | chr4_4:62906665-62906684 | None:intergenic | 50.0% | |
AGTTCTTGCCAGCCATCAAG+AGG | - | chr4_4:62906750-62906769 | Msa0693770:intron | 50.0% | |
! | AACCTTTGCCTCTTGATGGC+TGG | + | chr4_4:62906761-62906780 | None:intergenic | 50.0% |
CTCTTTGTTGCGAGGCAATC+CGG | + | chr4_4:62906833-62906852 | None:intergenic | 50.0% | |
GGCACCAAGTCTACTGATAC+AGG | + | chr4_4:62906908-62906927 | None:intergenic | 50.0% | |
!! | TGGTGCCGTCATACCTCTTT+CGG | - | chr4_4:62906921-62906940 | Msa0693770:CDS | 50.0% |
! | GAACATTGCATCGGCGGTGA+TGG | + | chr4_4:62904586-62904605 | None:intergenic | 55.0% |
TTCAGTTTCAGCGCGTGACG+TGG | - | chr4_4:62905226-62905245 | Msa0693770:CDS | 55.0% | |
TCAGCGCGTGACGTGGAAAT+TGG | - | chr4_4:62905233-62905252 | Msa0693770:CDS | 55.0% | |
GATTTCTTGAGCCAGGGGCT+GGG | + | chr4_4:62905506-62905525 | None:intergenic | 55.0% | |
TGATTTCTTGAGCCAGGGGC+TGG | + | chr4_4:62905507-62905526 | None:intergenic | 55.0% | |
ACCCGTTTGCAGCAGGATCT+CGG | - | chr4_4:62905635-62905654 | Msa0693770:CDS | 55.0% | |
ACCGAGATCCTGCTGCAAAC+GGG | + | chr4_4:62905639-62905658 | None:intergenic | 55.0% | |
GTTTGCAGCAGGATCTCGGT+TGG | - | chr4_4:62905639-62905658 | Msa0693770:CDS | 55.0% | |
GAGTATCCATGCCTCTTCCG+AGG | - | chr4_4:62905672-62905691 | Msa0693770:CDS | 55.0% | |
AGGAAACCTCGGAAGAGGCA+TGG | + | chr4_4:62905681-62905700 | None:intergenic | 55.0% | |
GATCCCGTTATTGTGGCCAC+TGG | - | chr4_4:62905829-62905848 | Msa0693770:intron | 55.0% | |
CGTTATTGTGGCCACTGGTC+AGG | - | chr4_4:62905834-62905853 | Msa0693770:intron | 55.0% | |
CTGACCTGCAGGAAAGCTTC+CGG | + | chr4_4:62906201-62906220 | None:intergenic | 55.0% | |
GCTTTCCTGCAGGTCAGTTG+AGG | - | chr4_4:62906204-62906223 | Msa0693770:CDS | 55.0% | |
GGAACAAGGGCAGAGCCATA+AGG | - | chr4_4:62906647-62906666 | Msa0693770:intron | 55.0% | |
TGCCAGCCATCAAGAGGCAA+AGG | - | chr4_4:62906756-62906775 | Msa0693770:intron | 55.0% | |
GCTGCGTTCTCTTTGTTGCG+AGG | + | chr4_4:62906841-62906860 | None:intergenic | 55.0% | |
CTGGTACAGAGCGAGCCAAA+CGG | - | chr4_4:62906956-62906975 | Msa0693770:CDS | 55.0% | |
TACAGAGCGAGCCAAACGGA+AGG | - | chr4_4:62906960-62906979 | Msa0693770:CDS | 55.0% | |
ACAATGGCCGGTGAGTTCGC+CGG | - | chr4_4:62904483-62904502 | Msa0693770:three_prime_UTR | 60.0% | |
GTTGTCTCCGGCGAACTCAC+CGG | + | chr4_4:62904493-62904512 | None:intergenic | 60.0% | |
GACATCACCGGAATGTGCGC+CGG | - | chr4_4:62904540-62904559 | Msa0693770:three_prime_UTR | 60.0% | |
GGAAGAATCGCCTCCTCCTC+CGG | + | chr4_4:62904562-62904581 | None:intergenic | 60.0% | |
! | CATTGCATCGGCGGTGATGG+AGG | + | chr4_4:62904583-62904602 | None:intergenic | 60.0% |
AGCTGCAACCCGTTTGCAGC+AGG | - | chr4_4:62905628-62905647 | Msa0693770:CDS | 60.0% | |
TCGTCCGGAAGCTTTCCTGC+AGG | - | chr4_4:62906194-62906213 | Msa0693770:CDS | 60.0% | |
GCACTCCTCAACTGACCTGC+AGG | + | chr4_4:62906212-62906231 | None:intergenic | 60.0% | |
AGTCCTCCGAGCTGGAACCA+TGG | - | chr4_4:62906450-62906469 | Msa0693770:CDS | 60.0% | |
CTTCCATGGTTCCAGCTCGG+AGG | + | chr4_4:62906456-62906475 | None:intergenic | 60.0% | |
AAGGGCAGAGCCATAAGGGC+AGG | - | chr4_4:62906652-62906671 | Msa0693770:intron | 60.0% | |
AGGGCAGAGCCATAAGGGCA+GGG | - | chr4_4:62906653-62906672 | Msa0693770:intron | 60.0% | |
GTTCGCCGGAGACAACACGC+CGG | - | chr4_4:62904497-62904516 | Msa0693770:three_prime_UTR | 65.0% | |
GAGCTCCGGCGTGTTGTCTC+CGG | + | chr4_4:62904505-62904524 | None:intergenic | 65.0% | |
ATCACCGGAATGTGCGCCGG+AGG | - | chr4_4:62904543-62904562 | Msa0693770:three_prime_UTR | 65.0% | |
TCCTCCTCCGGCGCACATTC+CGG | + | chr4_4:62904550-62904569 | None:intergenic | 65.0% | |
ACCGGAATGTGCGCCGGAGG+AGG | - | chr4_4:62904546-62904565 | Msa0693770:three_prime_UTR | 70.0% | |
GGAATGTGCGCCGGAGGAGG+AGG | - | chr4_4:62904549-62904568 | Msa0693770:three_prime_UTR | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 62904359 | 62907353 | 62904359 | ID=Msa0693770;Name=Msa0693770 |
chr4_4 | mRNA | 62904359 | 62907353 | 62904359 | ID=Msa0693770-mRNA-1;Parent=Msa0693770;Name=Msa0693770-mRNA-1;_AED=0.03;_eAED=0.03;_QI=127|1|1|1|1|1|4|327|652 |
chr4_4 | exon | 62904359 | 62905756 | 62904359 | ID=Msa0693770-mRNA-1:exon:17657;Parent=Msa0693770-mRNA-1 |
chr4_4 | exon | 62905857 | 62906291 | 62905857 | ID=Msa0693770-mRNA-1:exon:17656;Parent=Msa0693770-mRNA-1 |
chr4_4 | exon | 62906395 | 62906511 | 62906395 | ID=Msa0693770-mRNA-1:exon:17655;Parent=Msa0693770-mRNA-1 |
chr4_4 | exon | 62906891 | 62907353 | 62906891 | ID=Msa0693770-mRNA-1:exon:17654;Parent=Msa0693770-mRNA-1 |
chr4_4 | five_prime_UTR | 62907227 | 62907353 | 62907227 | ID=Msa0693770-mRNA-1:five_prime_utr;Parent=Msa0693770-mRNA-1 |
chr4_4 | CDS | 62906891 | 62907226 | 62906891 | ID=Msa0693770-mRNA-1:cds;Parent=Msa0693770-mRNA-1 |
chr4_4 | CDS | 62906395 | 62906511 | 62906395 | ID=Msa0693770-mRNA-1:cds;Parent=Msa0693770-mRNA-1 |
chr4_4 | CDS | 62905857 | 62906291 | 62905857 | ID=Msa0693770-mRNA-1:cds;Parent=Msa0693770-mRNA-1 |
chr4_4 | CDS | 62904686 | 62905756 | 62904686 | ID=Msa0693770-mRNA-1:cds;Parent=Msa0693770-mRNA-1 |
chr4_4 | three_prime_UTR | 62904359 | 62904685 | 62904359 | ID=Msa0693770-mRNA-1:three_prime_utr;Parent=Msa0693770-mRNA-1 |
Gene Sequence |
Protein sequence |