Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0519360 | XP_013461778.1 | 99.411 | 1019 | 6 | 0 | 1 | 1019 | 1 | 1019 | 0.0 | 2076 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0519360 | sp|Q37145|ACA1_ARATH | 80.962 | 1019 | 193 | 1 | 1 | 1018 | 1 | 1019 | 0.0 | 1702 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0519360 | A0A072V395 | 99.411 | 1019 | 6 | 0 | 1 | 1019 | 1 | 1019 | 0.0 | 2076 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0140140 | Msa0519360 | 0.978810 | 1.307613e-146 | -8.615850e-47 |
Msa0185340 | Msa0519360 | 0.802130 | 6.490462e-49 | -8.615850e-47 |
Msa0198210 | Msa0519360 | 0.811257 | 7.665642e-51 | -8.615850e-47 |
Msa0207690 | Msa0519360 | 0.803204 | 3.898330e-49 | -8.615850e-47 |
Msa0380980 | Msa0519360 | 0.814393 | 1.576668e-51 | -8.615850e-47 |
Msa0381100 | Msa0519360 | 0.834836 | 2.380316e-56 | -8.615850e-47 |
Msa0430970 | Msa0519360 | 0.998287 | 7.233581e-261 | -8.615850e-47 |
Msa0476960 | Msa0519360 | 0.811045 | 8.519707e-51 | -8.615850e-47 |
Msa0242820 | Msa0519360 | 0.827488 | 1.521494e-54 | -8.615850e-47 |
Msa0287660 | Msa0519360 | 0.834851 | 2.359552e-56 | -8.615850e-47 |
Msa0303920 | Msa0519360 | 0.802094 | 6.603702e-49 | -8.615850e-47 |
Msa0353500 | Msa0519360 | 0.809415 | 1.913608e-50 | -8.615850e-47 |
Msa0519360 | Msa0521940 | 0.804580 | 2.017652e-49 | -8.615850e-47 |
Msa0519360 | Msa0553950 | 0.845544 | 3.801322e-59 | -8.615850e-47 |
Msa0519360 | Msa0606120 | 0.803025 | 4.244953e-49 | -8.615850e-47 |
Msa0519360 | Msa0627580 | 0.822263 | 2.601243e-53 | -8.615850e-47 |
Msa0519360 | Msa0690930 | 0.815740 | 7.917570e-52 | -8.615850e-47 |
Msa0519360 | Msa0693770 | 0.808404 | 3.149460e-50 | -8.615850e-47 |
Msa0519360 | Msa0715510 | 0.826452 | 2.692204e-54 | -8.615850e-47 |
Msa0519360 | Msa0930210 | 0.846506 | 2.080868e-59 | -8.615850e-47 |
Msa0519360 | Msa1019220 | 0.800940 | 1.138291e-48 | -8.615850e-47 |
Msa0519360 | Msa1040730 | 0.836079 | 1.154446e-56 | -8.615850e-47 |
Msa0519360 | Msa1128650 | 0.813231 | 2.841595e-51 | -8.615850e-47 |
Msa0519360 | Msa1131180 | 0.817939 | 2.541813e-52 | -8.615850e-47 |
Msa0519360 | Msa1175380 | 0.851237 | 1.011685e-60 | -8.615850e-47 |
Msa0519360 | Msa1235470 | 0.833329 | 5.678983e-56 | -8.615850e-47 |
Msa0519360 | Msa1277350 | 0.852034 | 6.015078e-61 | -8.615850e-47 |
Msa0519360 | Msa1315760 | 0.851865 | 6.716646e-61 | -8.615850e-47 |
Msa0519360 | Msa1412620 | 0.815641 | 8.332251e-52 | -8.615850e-47 |
Msa0519360 | Msa1463590 | 0.819035 | 1.434730e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0519360 | MtrunA17_Chr3g0134771 | 99.411 | 1019 | 6 | 0 | 1 | 1019 | 1 | 1019 | 0.0 | 2076 |
Msa0519360 | MtrunA17_Chr5g0401211 | 79.744 | 1017 | 202 | 3 | 1 | 1016 | 1 | 1014 | 0.0 | 1649 |
Msa0519360 | MtrunA17_Chr4g0054021 | 77.112 | 935 | 209 | 2 | 83 | 1016 | 7 | 937 | 0.0 | 1468 |
Msa0519360 | MtrunA17_Chr1g0173111 | 63.555 | 1007 | 362 | 4 | 11 | 1016 | 9 | 1011 | 0.0 | 1309 |
Msa0519360 | MtrunA17_Chr8g0382071 | 62.316 | 1019 | 376 | 6 | 1 | 1016 | 1 | 1014 | 0.0 | 1294 |
Msa0519360 | MtrunA17_Chr4g0020551 | 62.471 | 874 | 322 | 3 | 75 | 944 | 6 | 877 | 0.0 | 1099 |
Msa0519360 | MtrunA17_Chr8g0355421 | 51.229 | 1017 | 483 | 7 | 1 | 1016 | 1 | 1005 | 0.0 | 997 |
Msa0519360 | MtrunA17_Chr4g0002331 | 48.848 | 1042 | 485 | 14 | 6 | 1016 | 57 | 1081 | 0.0 | 903 |
Msa0519360 | MtrunA17_Chr2g0298871 | 47.923 | 1035 | 499 | 12 | 13 | 1016 | 44 | 1069 | 0.0 | 889 |
Msa0519360 | MtrunA17_Chr6g0456201 | 47.284 | 939 | 455 | 12 | 106 | 1016 | 80 | 1006 | 0.0 | 800 |
Msa0519360 | MtrunA17_Chr7g0260401 | 45.578 | 1029 | 494 | 19 | 34 | 1016 | 31 | 1039 | 0.0 | 790 |
Msa0519360 | MtrunA17_Chr8g0340261 | 47.417 | 542 | 247 | 8 | 491 | 1016 | 22 | 541 | 1.93e-154 | 469 |
Msa0519360 | MtrunA17_Chr2g0334231 | 45.532 | 470 | 229 | 9 | 9 | 466 | 50 | 504 | 1.98e-111 | 355 |
Msa0519360 | MtrunA17_Chr8g0346461 | 30.813 | 873 | 492 | 24 | 132 | 907 | 30 | 887 | 1.43e-99 | 337 |
Msa0519360 | MtrunA17_Chr8g0340271 | 47.554 | 368 | 182 | 4 | 106 | 462 | 79 | 446 | 3.08e-99 | 322 |
Msa0519360 | MtrunA17_Chr7g0263361 | 32.729 | 828 | 460 | 24 | 132 | 876 | 42 | 855 | 3.59e-99 | 336 |
Msa0519360 | MtrunA17_Chr3g0134951 | 29.917 | 839 | 481 | 22 | 139 | 903 | 25 | 830 | 7.05e-82 | 287 |
Msa0519360 | MtrunA17_Chr4g0005551 | 26.015 | 961 | 621 | 27 | 96 | 1016 | 57 | 967 | 9.54e-82 | 286 |
Msa0519360 | MtrunA17_Chr5g0447521 | 25.000 | 932 | 613 | 26 | 106 | 1001 | 110 | 991 | 1.10e-72 | 261 |
Msa0519360 | MtrunA17_Chr2g0334221 | 45.031 | 322 | 156 | 6 | 466 | 773 | 23 | 337 | 9.02e-70 | 236 |
Msa0519360 | MtrunA17_Chr2g0333721 | 26.667 | 720 | 428 | 25 | 121 | 824 | 19 | 654 | 1.15e-47 | 184 |
Msa0519360 | MtrunA17_Chr8g0381711 | 25.130 | 768 | 465 | 21 | 145 | 872 | 37 | 734 | 8.23e-47 | 181 |
Msa0519360 | MtrunA17_Chr2g0298031 | 24.761 | 731 | 451 | 23 | 121 | 831 | 26 | 677 | 2.23e-46 | 180 |
Msa0519360 | MtrunA17_Chr1g0147981 | 25.239 | 733 | 450 | 25 | 121 | 834 | 38 | 691 | 2.68e-46 | 180 |
Msa0519360 | MtrunA17_Chr3g0138931 | 25.408 | 736 | 445 | 23 | 121 | 834 | 21 | 674 | 4.20e-46 | 179 |
Msa0519360 | MtrunA17_Chr8g0365021 | 25.035 | 715 | 446 | 23 | 121 | 824 | 91 | 726 | 4.38e-46 | 180 |
Msa0519360 | MtrunA17_Chr1g0148031 | 24.792 | 722 | 448 | 22 | 131 | 834 | 30 | 674 | 2.65e-45 | 177 |
Msa0519360 | MtrunA17_Chr4g0072131 | 24.339 | 719 | 446 | 22 | 121 | 824 | 24 | 659 | 3.85e-45 | 176 |
Msa0519360 | MtrunA17_Chr4g0065481 | 24.690 | 725 | 439 | 22 | 131 | 831 | 31 | 672 | 4.48e-45 | 176 |
Msa0519360 | MtrunA17_Chr2g0334201 | 46.341 | 164 | 87 | 1 | 854 | 1016 | 1 | 164 | 3.24e-44 | 158 |
Msa0519360 | MtrunA17_Chr2g0304941 | 23.928 | 723 | 447 | 24 | 131 | 831 | 31 | 672 | 6.87e-44 | 172 |
Msa0519360 | MtrunA17_Chr4g0059961 | 25.424 | 590 | 366 | 17 | 241 | 824 | 139 | 660 | 8.80e-42 | 166 |
Msa0519360 | MtrunA17_Chr6g0452721 | 24.470 | 707 | 441 | 21 | 131 | 824 | 32 | 658 | 8.55e-41 | 163 |
Msa0519360 | MtrunA17_Chr8g0335291 | 24.824 | 709 | 441 | 23 | 131 | 824 | 32 | 663 | 7.17e-40 | 160 |
Msa0519360 | MtrunA17_Chr7g0276551 | 26.887 | 424 | 258 | 10 | 405 | 824 | 46 | 421 | 1.89e-35 | 144 |
Msa0519360 | MtrunA17_Chr2g0297051 | 24.610 | 577 | 332 | 15 | 258 | 829 | 493 | 971 | 3.87e-29 | 125 |
Msa0519360 | MtrunA17_Chr5g0397621 | 24.258 | 573 | 320 | 16 | 260 | 827 | 378 | 841 | 5.77e-29 | 125 |
Msa0519360 | MtrunA17_Chr8g0339181 | 27.178 | 574 | 305 | 19 | 260 | 827 | 441 | 907 | 3.06e-28 | 122 |
Msa0519360 | MtrunA17_Chr4g0054031 | 67.647 | 68 | 22 | 0 | 1 | 68 | 1 | 68 | 7.33e-27 | 105 |
Msa0519360 | MtrunA17_Chr8g0374391 | 32.955 | 176 | 90 | 3 | 652 | 827 | 36 | 183 | 1.66e-21 | 94.7 |
Msa0519360 | MtrunA17_Chr8g0374331 | 32.955 | 176 | 90 | 3 | 652 | 827 | 43 | 190 | 1.90e-21 | 94.7 |
Msa0519360 | MtrunA17_Chr3g0131151 | 23.767 | 669 | 344 | 25 | 240 | 798 | 257 | 869 | 1.98e-20 | 97.8 |
Msa0519360 | MtrunA17_Chr8g0363911 | 24.646 | 353 | 178 | 10 | 430 | 704 | 400 | 742 | 3.81e-16 | 84.0 |
Msa0519360 | MtrunA17_Chr4g0052521 | 28.788 | 198 | 112 | 4 | 632 | 829 | 771 | 939 | 5.51e-16 | 83.2 |
Msa0519360 | MtrunA17_Chr4g0020561 | 48.571 | 70 | 36 | 0 | 947 | 1016 | 1 | 70 | 9.63e-14 | 67.8 |
Msa0519360 | MtrunA17_Chr4g0020541 | 48.529 | 68 | 34 | 1 | 1 | 68 | 1 | 67 | 1.48e-13 | 66.6 |
Msa0519360 | MtrunA17_Chr4g0071991 | 30.625 | 160 | 85 | 3 | 647 | 806 | 512 | 645 | 1.99e-11 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0519360 | AT1G27770.4 | 80.962 | 1019 | 193 | 1 | 1 | 1018 | 1 | 1019 | 0.0 | 1702 |
Msa0519360 | AT1G27770.1 | 80.962 | 1019 | 193 | 1 | 1 | 1018 | 1 | 1019 | 0.0 | 1702 |
Msa0519360 | AT4G37640.1 | 78.094 | 1018 | 217 | 5 | 1 | 1016 | 1 | 1014 | 0.0 | 1632 |
Msa0519360 | AT2G22950.1 | 78.410 | 1019 | 213 | 6 | 1 | 1016 | 1 | 1015 | 0.0 | 1628 |
Msa0519360 | AT1G27770.3 | 79.873 | 944 | 189 | 1 | 76 | 1018 | 13 | 956 | 0.0 | 1551 |
Msa0519360 | AT3G57330.1 | 64.123 | 1009 | 351 | 7 | 11 | 1018 | 9 | 1007 | 0.0 | 1287 |
Msa0519360 | AT2G41560.1 | 63.960 | 1010 | 354 | 8 | 11 | 1018 | 9 | 1010 | 0.0 | 1284 |
Msa0519360 | AT3G57330.2 | 64.792 | 960 | 327 | 7 | 60 | 1018 | 3 | 952 | 0.0 | 1244 |
Msa0519360 | AT2G41560.2 | 65.683 | 915 | 305 | 7 | 106 | 1018 | 1 | 908 | 0.0 | 1205 |
Msa0519360 | AT2G41560.3 | 65.683 | 915 | 305 | 7 | 106 | 1018 | 1 | 908 | 0.0 | 1205 |
Msa0519360 | AT2G41560.4 | 65.683 | 915 | 305 | 7 | 106 | 1018 | 1 | 908 | 0.0 | 1205 |
Msa0519360 | AT1G27770.2 | 72.276 | 725 | 190 | 5 | 1 | 723 | 1 | 716 | 0.0 | 1031 |
Msa0519360 | AT1G27770.2 | 84.887 | 311 | 47 | 0 | 708 | 1018 | 635 | 945 | 0.0 | 557 |
Msa0519360 | AT4G29900.1 | 50.097 | 1036 | 482 | 13 | 4 | 1016 | 26 | 1049 | 0.0 | 938 |
Msa0519360 | AT4G29900.2 | 50.097 | 1036 | 482 | 13 | 4 | 1016 | 26 | 1049 | 0.0 | 938 |
Msa0519360 | AT5G57110.1 | 48.544 | 1030 | 489 | 12 | 12 | 1016 | 34 | 1047 | 0.0 | 897 |
Msa0519360 | AT5G57110.3 | 48.544 | 1030 | 489 | 12 | 12 | 1016 | 34 | 1047 | 0.0 | 897 |
Msa0519360 | AT5G57110.2 | 48.544 | 1030 | 489 | 12 | 12 | 1016 | 34 | 1047 | 0.0 | 897 |
Msa0519360 | AT3G21180.1 | 48.691 | 1031 | 483 | 13 | 15 | 1016 | 51 | 1064 | 0.0 | 879 |
Msa0519360 | AT3G63380.1 | 44.566 | 1003 | 515 | 12 | 34 | 1016 | 25 | 1006 | 0.0 | 767 |
Msa0519360 | AT3G22910.1 | 46.064 | 940 | 470 | 12 | 96 | 1016 | 81 | 1002 | 0.0 | 748 |
Msa0519360 | AT5G53010.1 | 35.996 | 1014 | 548 | 27 | 31 | 1003 | 79 | 1032 | 1.98e-150 | 474 |
Msa0519360 | AT5G53010.2 | 36.477 | 721 | 411 | 20 | 31 | 728 | 79 | 775 | 3.61e-105 | 346 |
Msa0519360 | AT1G07670.2 | 33.654 | 832 | 454 | 28 | 126 | 876 | 36 | 850 | 3.19e-99 | 337 |
Msa0519360 | AT1G07670.1 | 33.654 | 832 | 454 | 28 | 126 | 876 | 36 | 850 | 3.19e-99 | 337 |
Msa0519360 | AT4G00900.2 | 31.591 | 842 | 481 | 17 | 121 | 876 | 14 | 846 | 3.24e-99 | 337 |
Msa0519360 | AT4G00900.1 | 31.591 | 842 | 481 | 17 | 121 | 876 | 14 | 846 | 3.24e-99 | 337 |
Msa0519360 | AT1G07810.1 | 33.657 | 823 | 448 | 28 | 135 | 876 | 45 | 850 | 2.76e-97 | 332 |
Msa0519360 | AT1G10130.1 | 31.404 | 812 | 463 | 21 | 135 | 876 | 23 | 810 | 3.73e-87 | 302 |
Msa0519360 | AT1G80660.3 | 25.718 | 731 | 443 | 25 | 108 | 824 | 15 | 659 | 2.89e-48 | 186 |
Msa0519360 | AT1G80660.4 | 25.718 | 731 | 443 | 25 | 108 | 824 | 15 | 659 | 3.18e-48 | 186 |
Msa0519360 | AT1G80660.1 | 25.613 | 734 | 440 | 25 | 108 | 824 | 15 | 659 | 4.20e-48 | 186 |
Msa0519360 | AT2G07560.1 | 25.275 | 728 | 430 | 27 | 131 | 831 | 31 | 671 | 9.51e-47 | 182 |
Msa0519360 | AT3G60330.4 | 25.140 | 716 | 445 | 22 | 131 | 836 | 31 | 665 | 1.36e-46 | 181 |
Msa0519360 | AT3G60330.3 | 25.140 | 716 | 445 | 22 | 131 | 836 | 31 | 665 | 1.36e-46 | 181 |
Msa0519360 | AT1G80660.2 | 26.102 | 590 | 362 | 17 | 241 | 824 | 9 | 530 | 2.00e-46 | 180 |
Msa0519360 | AT3G60330.2 | 25.000 | 716 | 446 | 22 | 131 | 836 | 31 | 665 | 3.03e-46 | 181 |
Msa0519360 | AT3G60330.1 | 25.000 | 716 | 446 | 22 | 131 | 836 | 31 | 665 | 3.03e-46 | 181 |
Msa0519360 | AT2G24520.3 | 24.722 | 720 | 445 | 22 | 131 | 831 | 10 | 651 | 2.18e-45 | 177 |
Msa0519360 | AT2G24520.1 | 24.722 | 720 | 445 | 22 | 131 | 831 | 10 | 651 | 2.18e-45 | 177 |
Msa0519360 | AT2G24520.2 | 24.722 | 720 | 445 | 22 | 131 | 831 | 73 | 714 | 3.39e-45 | 177 |
Msa0519360 | AT1G17260.1 | 25.574 | 610 | 362 | 15 | 241 | 836 | 141 | 672 | 4.41e-45 | 177 |
Msa0519360 | AT5G57350.4 | 24.658 | 730 | 433 | 20 | 131 | 831 | 29 | 670 | 2.19e-44 | 174 |
Msa0519360 | AT5G57350.2 | 24.658 | 730 | 433 | 20 | 131 | 831 | 29 | 670 | 2.19e-44 | 174 |
Msa0519360 | AT5G57350.1 | 24.658 | 730 | 433 | 20 | 131 | 831 | 29 | 670 | 2.19e-44 | 174 |
Msa0519360 | AT3G42640.1 | 24.899 | 739 | 445 | 27 | 121 | 834 | 22 | 675 | 3.15e-42 | 167 |
Msa0519360 | AT4G30190.1 | 23.490 | 745 | 462 | 22 | 131 | 855 | 28 | 684 | 4.78e-41 | 164 |
Msa0519360 | AT5G62670.1 | 24.718 | 708 | 438 | 22 | 131 | 824 | 32 | 658 | 5.33e-41 | 164 |
Msa0519360 | AT2G18960.1 | 23.688 | 743 | 463 | 23 | 131 | 855 | 28 | 684 | 9.14e-41 | 163 |
Msa0519360 | AT3G47950.1 | 24.542 | 709 | 438 | 22 | 131 | 824 | 36 | 662 | 1.80e-40 | 162 |
Msa0519360 | AT3G47950.2 | 24.542 | 709 | 438 | 22 | 131 | 824 | 36 | 662 | 1.80e-40 | 162 |
Msa0519360 | AT2G18960.3 | 23.764 | 627 | 391 | 17 | 241 | 855 | 69 | 620 | 6.86e-40 | 160 |
Msa0519360 | AT2G18960.2 | 23.764 | 627 | 391 | 17 | 241 | 855 | 69 | 620 | 6.86e-40 | 160 |
Msa0519360 | AT4G30190.2 | 22.879 | 778 | 459 | 24 | 131 | 855 | 28 | 717 | 1.88e-37 | 152 |
Msa0519360 | AT5G44790.1 | 25.217 | 690 | 393 | 23 | 163 | 827 | 355 | 946 | 1.15e-32 | 137 |
Msa0519360 | AT5G57350.3 | 24.374 | 439 | 273 | 9 | 405 | 831 | 17 | 408 | 1.88e-32 | 135 |
Msa0519360 | AT2G24520.4 | 23.864 | 440 | 274 | 10 | 405 | 831 | 17 | 408 | 1.58e-30 | 129 |
Msa0519360 | AT5G23630.1 | 24.645 | 633 | 321 | 25 | 239 | 774 | 256 | 829 | 2.11e-20 | 98.2 |
Msa0519360 | AT4G30110.1 | 28.910 | 211 | 123 | 4 | 623 | 831 | 481 | 666 | 7.41e-14 | 76.6 |
Msa0519360 | AT4G30110.2 | 28.910 | 211 | 123 | 4 | 623 | 831 | 481 | 666 | 7.41e-14 | 76.6 |
Msa0519360 | AT4G11730.1 | 21.266 | 395 | 240 | 9 | 241 | 631 | 134 | 461 | 8.51e-12 | 70.1 |
Msa0519360 | AT2G19110.2 | 25.616 | 203 | 114 | 5 | 653 | 855 | 523 | 688 | 9.27e-12 | 70.1 |
Msa0519360 | AT2G19110.3 | 25.616 | 203 | 114 | 5 | 653 | 855 | 523 | 688 | 9.27e-12 | 70.1 |
Msa0519360 | AT2G19110.1 | 25.616 | 203 | 114 | 5 | 653 | 855 | 523 | 688 | 9.27e-12 | 70.1 |
Find 241 sgRNAs with CRISPR-Local
Find 472 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGACAATCATTGCAGTTTA+AGG | 0.103972 | 3_4:+71395110 | Msa0519360:CDS |
GAGACTGCCATCTTGGAATT+TGG | 0.130934 | 3_4:+71396029 | Msa0519360:CDS |
AAATGGAAAGATTGAGATTC+TGG | 0.212944 | 3_4:+71395995 | Msa0519360:CDS |
TTTATGGGTCAACATGATTA+TGG | 0.213842 | 3_4:+71398077 | Msa0519360:CDS |
AGCTTCAGCTTCAAATCTTT+TGG | 0.216230 | 3_4:-71393264 | None:intergenic |
GGAAGTCCTATTCCTATTAA+TGG | 0.218596 | 3_4:+71396365 | Msa0519360:CDS |
AATCATAATTGTTGAATTCT+TGG | 0.221827 | 3_4:+71398683 | Msa0519360:CDS |
AAAGTCCAGCCCGGGGATTT+TGG | 0.228585 | 3_4:+71394914 | Msa0519360:CDS |
CTATCGTCACTGTAGCTAAA+TGG | 0.228891 | 3_4:+71397821 | Msa0519360:CDS |
CGCTTCTTTATAGAATTAAA+TGG | 0.234218 | 3_4:-71396113 | None:intergenic |
AATGGCGTGGCTACCATTAT+TGG | 0.243299 | 3_4:+71395495 | Msa0519360:CDS |
AATCGGAGAAAAGAAATTTA+TGG | 0.256534 | 3_4:+71394874 | Msa0519360:CDS |
GCACTTCATGAAGCAGATAT+TGG | 0.275093 | 3_4:+71397321 | Msa0519360:CDS |
TAAAATAAATTCAGACAATT+AGG | 0.279757 | 3_4:+71398822 | Msa0519360:exon |
CAGACAATTAGGTACATTCT+TGG | 0.302708 | 3_4:+71398833 | Msa0519360:three_prime_UTR |
ACACAAGTGTAACCATTAAT+AGG | 0.310341 | 3_4:-71396377 | None:intergenic |
CTGTGAACACATAATTCTTT+AGG | 0.314922 | 3_4:-71398632 | None:intergenic |
AGAATTCAACAATTATGATT+TGG | 0.325770 | 3_4:-71398680 | None:intergenic |
AACCACAGTTTCAAACTTAG+AGG | 0.327489 | 3_4:-71398726 | None:intergenic |
TTTAGTGGTTGGCATAATAA+TGG | 0.328547 | 3_4:+71395002 | Msa0519360:CDS |
TATATCAATTTGTCATAATC+TGG | 0.328628 | 3_4:+71398226 | Msa0519360:CDS |
CTAAATTTGGTATTTGTTGC+TGG | 0.329669 | 3_4:+71398975 | Msa0519360:three_prime_UTR |
GAAGAGGTTGTTGCAGTTAC+TGG | 0.330933 | 3_4:+71397276 | Msa0519360:CDS |
GGGCTTGCAATGGGCATTGC+TGG | 0.332868 | 3_4:+71397342 | Msa0519360:CDS |
TCAATATATGATCTACTTCC+TGG | 0.338483 | 3_4:+71395198 | Msa0519360:CDS |
AACTGAGTAGAGACTAAATT+TGG | 0.350202 | 3_4:+71398962 | Msa0519360:three_prime_UTR |
ATCATAATTGTTGAATTCTT+GGG | 0.355823 | 3_4:+71398684 | Msa0519360:CDS |
GCGATGTATATTATATGAAC+TGG | 0.361261 | 3_4:+71399049 | Msa0519360:three_prime_UTR |
AACAATTATGATTTGGAAGA+TGG | 0.361448 | 3_4:-71398673 | None:intergenic |
AGACTGCCATCTTGGAATTT+GGG | 0.362502 | 3_4:+71396030 | Msa0519360:CDS |
CACTTCATGAAGCAGATATT+GGG | 0.363780 | 3_4:+71397322 | Msa0519360:CDS |
TAAGGCACTCGTCCGTCATT+TGG | 0.363836 | 3_4:+71395746 | Msa0519360:CDS |
TATCGTCACTGTAGCTAAAT+GGG | 0.371973 | 3_4:+71397822 | Msa0519360:CDS |
CAGATAGAAGAAAAGGATTA+AGG | 0.380842 | 3_4:-71395344 | None:intergenic |
AGTTACTTGAATGAGAATTT+CGG | 0.382977 | 3_4:+71393134 | Msa0519360:CDS |
AGAGATGGAGGAAGCTTTGT+TGG | 0.385667 | 3_4:+71393195 | Msa0519360:CDS |
TTCACTTCTGCTTGTTTGAC+AGG | 0.389146 | 3_4:+71397922 | Msa0519360:CDS |
AGCTATTAGACGCTCTAATC+AGG | 0.393785 | 3_4:+71393283 | Msa0519360:CDS |
ACCAACTGAGACTGCCATCT+TGG | 0.399147 | 3_4:+71396022 | Msa0519360:CDS |
CACTAGGGTATGCTTATCCA+TGG | 0.400728 | 3_4:-71397232 | None:intergenic |
GATATTGTCCATCTTAATAT+CGG | 0.403549 | 3_4:+71395222 | Msa0519360:CDS |
GAGAGTCTGTAGCCATTTGT+AGG | 0.407489 | 3_4:+71396441 | Msa0519360:CDS |
CAATTCATTTGTATTCTGTC+AGG | 0.411644 | 3_4:+71398326 | Msa0519360:CDS |
AAAATTCATGGTGGGGTTGA+GGG | 0.414334 | 3_4:+71394790 | Msa0519360:CDS |
GCAATTAGAGCATAAATAGA+TGG | 0.415276 | 3_4:+71393109 | Msa0519360:exon |
CACTCATTTCACGGAACTCC+GGG | 0.415424 | 3_4:-71396568 | None:intergenic |
AGAATTGCTATAGCAGAATC+AGG | 0.416782 | 3_4:-71395924 | None:intergenic |
TTCAATATCAGATCACTATC+CGG | 0.418969 | 3_4:-71398291 | None:intergenic |
TTTGTTCCAGATAGAAGAAA+AGG | 0.425832 | 3_4:-71395351 | None:intergenic |
AAGTTTCCTTTCCTACCAAC+TGG | 0.427236 | 3_4:-71398162 | None:intergenic |
TGCAGTATTTATGTTGTCTC+CGG | 0.427260 | 3_4:-71396492 | None:intergenic |
ACTTTCTCAGTGTTGGTCCA+AGG | 0.428486 | 3_4:+71395546 | Msa0519360:CDS |
GAAAATTCATGGTGGGGTTG+AGG | 0.433201 | 3_4:+71394789 | Msa0519360:CDS |
CAACAACATTTACAGTTAGC+TGG | 0.435190 | 3_4:-71397885 | None:intergenic |
TAAATTTGAGAAACTGTAGA+TGG | 0.435212 | 3_4:-71399170 | None:intergenic |
AAGGGTCCGGAGAGCTTCAT+TGG | 0.436598 | 3_4:-71396303 | None:intergenic |
GGAGTCCTTGGCATGCCAAT+TGG | 0.436941 | 3_4:+71398765 | Msa0519360:CDS |
ACCGATGGTATGGCGATTGA+AGG | 0.438951 | 3_4:+71396545 | Msa0519360:CDS |
TTGATGCTTGTCGTTCTTTG+TGG | 0.443412 | 3_4:-71396073 | None:intergenic |
ATTACAGTTAGGATGGTTAC+CGG | 0.444569 | 3_4:+71396473 | Msa0519360:CDS |
ATCTTCAAAGCTGCACCAAT+TGG | 0.446311 | 3_4:-71398780 | None:intergenic |
ATTCCTTCTCACTCATTTCA+CGG | 0.447353 | 3_4:-71396577 | None:intergenic |
AGATGATGAAACTCCCTTGC+AGG | 0.449229 | 3_4:+71395464 | Msa0519360:CDS |
TGTTGTGACTTTCTCAGTGT+TGG | 0.449710 | 3_4:+71395539 | Msa0519360:CDS |
TGGCCTAAGGGTGCACAGGA+TGG | 0.454989 | 3_4:+71395030 | Msa0519360:CDS |
ATTTATACATACAGAGAAAC+CGG | 0.455091 | 3_4:-71395277 | None:intergenic |
ATTTATCCTCTCCATGTCTC+TGG | 0.457311 | 3_4:-71398595 | None:intergenic |
CTGTTCTCACATGAAAATCA+AGG | 0.459952 | 3_4:+71398863 | Msa0519360:three_prime_UTR |
TCTCGAACACCAGGACGGAC+TGG | 0.464005 | 3_4:-71396422 | None:intergenic |
TTGGAATTTGGGCTATCACT+TGG | 0.464467 | 3_4:+71396041 | Msa0519360:CDS |
TCAATTCCTGTGTCAACAAT+GGG | 0.464722 | 3_4:+71394827 | Msa0519360:CDS |
TCACTCATTTCACGGAACTC+CGG | 0.466465 | 3_4:-71396569 | None:intergenic |
GTGTAACCATTAATAGGAAT+AGG | 0.467917 | 3_4:-71396371 | None:intergenic |
GAATTTGGGCTATCACTTGG+TGG | 0.472359 | 3_4:+71396044 | Msa0519360:CDS |
CCTGCAGCTTTAACTTCCTC+TGG | 0.474934 | 3_4:-71394706 | None:intergenic |
GACAAATTTGTAGACTCAAA+TGG | 0.475551 | 3_4:+71396218 | Msa0519360:CDS |
GGTTCCCAATGGACATGGTC+TGG | 0.475865 | 3_4:+71395594 | Msa0519360:CDS |
CTTTCTCAGTGTTGGTCCAA+GGG | 0.478827 | 3_4:+71395547 | Msa0519360:CDS |
GTGAAGAAGTTGAAAATTCA+TGG | 0.478970 | 3_4:+71394778 | Msa0519360:CDS |
AGGCTCAATGTCACAGCTAA+AGG | 0.479225 | 3_4:-71395693 | None:intergenic |
GGCCTAAGGGTGCACAGGAT+GGG | 0.479350 | 3_4:+71395031 | Msa0519360:CDS |
AACCCAGTGGGGTAAACTAA+TGG | 0.480790 | 3_4:+71395422 | Msa0519360:CDS |
GCAGATATTGGGCTTGCAAT+GGG | 0.481740 | 3_4:+71397333 | Msa0519360:CDS |
ATCACCAGACCATGTCCATT+GGG | 0.482017 | 3_4:-71395598 | None:intergenic |
CTCAATTCCTGTGTCAACAA+TGG | 0.482527 | 3_4:+71394826 | Msa0519360:CDS |
TGGTATGGCGATTGAAGGCC+CGG | 0.482546 | 3_4:+71396550 | Msa0519360:CDS |
GAGATGGAGGAAGCTTTGTT+GGG | 0.482618 | 3_4:+71393196 | Msa0519360:CDS |
TAGCCATTAGTTTACCCCAC+TGG | 0.484249 | 3_4:-71395425 | None:intergenic |
CCAGAGGAAGTTAAAGCTGC+AGG | 0.485917 | 3_4:+71394706 | Msa0519360:CDS |
TTAAGGTCACTGACGTTCAC+TGG | 0.487193 | 3_4:-71395327 | None:intergenic |
TTGTTAAGAATCGTAAAAGA+AGG | 0.488378 | 3_4:+71393219 | Msa0519360:CDS |
GAAATTTGTGCTGATGAGGC+AGG | 0.489702 | 3_4:+71394733 | Msa0519360:CDS |
AATGGAAAGATTGAGATTCT+GGG | 0.489798 | 3_4:+71395996 | Msa0519360:CDS |
TGTAAGCAAGGCAAAGGGTC+CGG | 0.491855 | 3_4:-71396316 | None:intergenic |
GGTCGGCTGGTATTACAGTT+AGG | 0.492192 | 3_4:+71396462 | Msa0519360:CDS |
CATCCGAGCCTTTACTGAAT+CGG | 0.492608 | 3_4:+71394857 | Msa0519360:CDS |
CATCACCAGACCATGTCCAT+TGG | 0.493492 | 3_4:-71395599 | None:intergenic |
TTACACTTGTGTAGGAATAG+TGG | 0.497674 | 3_4:+71396388 | Msa0519360:CDS |
GAAATTCAGAGTTGCGGTGT+TGG | 0.507524 | 3_4:+71394540 | Msa0519360:CDS |
TCAATATCAGATCACTATCC+GGG | 0.508159 | 3_4:-71398290 | None:intergenic |
ATAAATGAATCAAGTTTGAC+AGG | 0.509890 | 3_4:+71395294 | Msa0519360:CDS |
TGAGAAATCAGAAGAGTCGA+TGG | 0.510967 | 3_4:-71395892 | None:intergenic |
CCCTTGCAGGTAAAACTCAA+TGG | 0.515185 | 3_4:+71395477 | Msa0519360:CDS |
TTGTAAAAGCTTGCATTTGT+GGG | 0.516369 | 3_4:+71395847 | Msa0519360:CDS |
ACAGCTAAAGGTAAACCTTC+AGG | 0.516985 | 3_4:-71395681 | None:intergenic |
AGCAGATATTGGGCTTGCAA+TGG | 0.517774 | 3_4:+71397332 | Msa0519360:CDS |
ATATCTGCTTCATGAAGTGC+TGG | 0.518967 | 3_4:-71397318 | None:intergenic |
AGCCATTAGTTTACCCCACT+GGG | 0.521590 | 3_4:-71395424 | None:intergenic |
ACAGTTCAGGTCACGCGGAA+TGG | 0.524389 | 3_4:+71395159 | Msa0519360:CDS |
GCATCTTGCATGATCCATCC+TGG | 0.524532 | 3_4:-71395377 | None:intergenic |
GGAGATCAAGTCCCTGCTGA+TGG | 0.524767 | 3_4:+71395243 | Msa0519360:CDS |
AGGGTGGCCTAAGGGTGCAC+AGG | 0.525077 | 3_4:+71395026 | Msa0519360:CDS |
GGGAACCTTCTTGCAGCTTG+CGG | 0.525729 | 3_4:-71395578 | None:intergenic |
CGGAAGAAGCACTTCAGAGA+TGG | 0.526799 | 3_4:+71393180 | Msa0519360:CDS |
GTAGCCATTTGTAGGTCGGC+TGG | 0.527651 | 3_4:+71396449 | Msa0519360:CDS |
AATAATGGAAGGGTGGCCTA+AGG | 0.528876 | 3_4:+71395017 | Msa0519360:CDS |
TTGTCCTCAAGTGTTTCACT+AGG | 0.531061 | 3_4:-71397248 | None:intergenic |
GTTGTAAAAGCTTGCATTTG+TGG | 0.531134 | 3_4:+71395846 | Msa0519360:CDS |
TTTAGCCGCAAGCTGCAAGA+AGG | 0.531798 | 3_4:+71395573 | Msa0519360:CDS |
GTTGTTGTTGCTGTTCCTGA+AGG | 0.532165 | 3_4:+71395666 | Msa0519360:CDS |
CTTGAGGACAACATTTGAAG+AGG | 0.532340 | 3_4:+71397260 | Msa0519360:CDS |
TGTGCTCTGTAACCACCATC+AGG | 0.532677 | 3_4:-71396158 | None:intergenic |
GATTTGGAAGATGGCGGTGC+AGG | 0.533227 | 3_4:-71398664 | None:intergenic |
ATTAATGGTTACACTTGTGT+AGG | 0.534072 | 3_4:+71396380 | Msa0519360:CDS |
AAAACCCAAAATCCCCGGGC+TGG | 0.535485 | 3_4:-71394919 | None:intergenic |
TTGGCTGCTTGTGAGACAAT+GGG | 0.535940 | 3_4:+71395765 | Msa0519360:CDS |
GAGGCAGGGACAATTGTTGA+TGG | 0.536587 | 3_4:+71394748 | Msa0519360:CDS |
GTGGTTGGCATAATAATGGA+AGG | 0.536833 | 3_4:+71395006 | Msa0519360:CDS |
TACACTTGTGTAGGAATAGT+GGG | 0.536929 | 3_4:+71396389 | Msa0519360:CDS |
AATTCTATAAAGAAGCGCAT+GGG | 0.540245 | 3_4:+71396119 | Msa0519360:CDS |
CTTGATCTCCGATATTAAGA+TGG | 0.540281 | 3_4:-71395230 | None:intergenic |
GTCAAAGTGAAACTATGTAA+AGG | 0.540997 | 3_4:-71392865 | None:intergenic |
TGTATCATTCAAGTGACTGA+TGG | 0.541682 | 3_4:-71396267 | None:intergenic |
AATACCAGCCGACCTACAAA+TGG | 0.542567 | 3_4:-71396453 | None:intergenic |
TATCAATGTAAGCAAGGCAA+AGG | 0.543394 | 3_4:-71396322 | None:intergenic |
AGAGCACCAGTTGGTAGGAA+AGG | 0.544242 | 3_4:+71398156 | Msa0519360:CDS |
TAAAAGTTGAACCGCAGTGA+GGG | 0.544308 | 3_4:-71398058 | None:intergenic |
TTCATCAACTCATCATTAGG+AGG | 0.544411 | 3_4:-71398132 | None:intergenic |
CAAACTTAGAGGAGATGTGT+TGG | 0.544815 | 3_4:-71398715 | None:intergenic |
GTTCTACAGCTTCCTGATGG+TGG | 0.545715 | 3_4:+71396146 | Msa0519360:CDS |
AAGGGTGCACAGGATGGGAT+TGG | 0.546416 | 3_4:+71395036 | Msa0519360:CDS |
AGAAGTTGAAAATTCATGGT+GGG | 0.547357 | 3_4:+71394782 | Msa0519360:CDS |
GTAGTTCTACAGCTTCCTGA+TGG | 0.548200 | 3_4:+71396143 | Msa0519360:CDS |
GAGATCAAGTCCCTGCTGAT+GGG | 0.548664 | 3_4:+71395244 | Msa0519360:CDS |
ATACGAAAACCCAAAATCCC+CGG | 0.550017 | 3_4:-71394924 | None:intergenic |
GCTTGCGGCTAAATAGCCCT+TGG | 0.550162 | 3_4:-71395563 | None:intergenic |
ATTCACTGAAAGTCCAGCCC+GGG | 0.551795 | 3_4:+71394906 | Msa0519360:CDS |
GTCTGTAGCCATTTGTAGGT+CGG | 0.558865 | 3_4:+71396445 | Msa0519360:CDS |
ATTAAAGATCCAGTCCGTCC+TGG | 0.559454 | 3_4:+71396413 | Msa0519360:CDS |
CATGAATATCAATGTAAGCA+AGG | 0.559724 | 3_4:-71396328 | None:intergenic |
GCCTTCAATCGCCATACCAT+CGG | 0.561530 | 3_4:-71396546 | None:intergenic |
TAATTCTATAAAGAAGCGCA+TGG | 0.564714 | 3_4:+71396118 | Msa0519360:CDS |
AAGATGCTTGTGACTACTGT+TGG | 0.565888 | 3_4:+71395393 | Msa0519360:CDS |
ATCAATGTAAGCAAGGCAAA+GGG | 0.567138 | 3_4:-71396321 | None:intergenic |
GGCTGGTATTACAGTTAGGA+TGG | 0.567797 | 3_4:+71396466 | Msa0519360:CDS |
TCTCCGATTCAGTAAAGGCT+CGG | 0.568788 | 3_4:-71394860 | None:intergenic |
TGGTTACAGAGCACATTGCA+AGG | 0.571260 | 3_4:+71396166 | Msa0519360:CDS |
AATTCACTGAAAGTCCAGCC+CGG | 0.571576 | 3_4:+71394905 | Msa0519360:CDS |
GCTACAGACTCTCGAACACC+AGG | 0.572194 | 3_4:-71396431 | None:intergenic |
CAACAACACCGGAGGTGAAG+TGG | 0.573382 | 3_4:+71395962 | Msa0519360:CDS |
CTCCTCTAAGTTTGAAACTG+TGG | 0.574054 | 3_4:+71398724 | Msa0519360:CDS |
ACTATCTGCAGTGACAAGAC+TGG | 0.574111 | 3_4:+71395798 | Msa0519360:CDS |
CGATGTATATTATATGAACT+GGG | 0.574659 | 3_4:+71399050 | Msa0519360:three_prime_UTR |
GACACAGGAATTGAGTTTGT+CGG | 0.578382 | 3_4:-71394818 | None:intergenic |
AATTTGCCAATGAAGCTCTC+CGG | 0.579182 | 3_4:+71396297 | Msa0519360:CDS |
TCTATCTGGAACAAAAGTCC+AGG | 0.579192 | 3_4:+71395359 | Msa0519360:CDS |
TGAGATCAGTTCCAGAGACA+TGG | 0.579474 | 3_4:+71398584 | Msa0519360:CDS |
TTGGCATGCCAAGGACTCCA+AGG | 0.579534 | 3_4:-71398761 | None:intergenic |
TTTGGCTGCTTGTGAGACAA+TGG | 0.584639 | 3_4:+71395764 | Msa0519360:CDS |
TCCAAGATGGCAGTCTCAGT+TGG | 0.585699 | 3_4:-71396023 | None:intergenic |
TAGAGGAGATGTGTTGGCAT+AGG | 0.587359 | 3_4:-71398709 | None:intergenic |
ATTCTATAAAGAAGCGCATG+GGG | 0.587913 | 3_4:+71396120 | Msa0519360:CDS |
AAGGCGATTGCTAGAGAATG+TGG | 0.588166 | 3_4:+71396515 | Msa0519360:CDS |
TACGAAAACCCAAAATCCCC+GGG | 0.588191 | 3_4:-71394923 | None:intergenic |
GTGATGTGGAGGAATATCAC+GGG | 0.590403 | 3_4:+71398195 | Msa0519360:CDS |
TGATGATGCAATGGAAATTG+TGG | 0.591363 | 3_4:+71395617 | Msa0519360:CDS |
GCTGCACTTCAGTTTATCCA+TGG | 0.592939 | 3_4:+71394571 | Msa0519360:CDS |
ACTTTATCAGTAACGTGATG+TGG | 0.593990 | 3_4:+71398181 | Msa0519360:CDS |
TCTCACAAGCAGCCAAATGA+CGG | 0.594170 | 3_4:-71395758 | None:intergenic |
AAGAAGCACTTCAGAGATGG+AGG | 0.596398 | 3_4:+71393183 | Msa0519360:CDS |
ATCATCTAGTATTATTACGT+CGG | 0.598204 | 3_4:-71397788 | None:intergenic |
CTAATGGCTACTCTAAGTGA+AGG | 0.600766 | 3_4:+71395438 | Msa0519360:CDS |
CTCATCATTAGGAGGTTCAG+TGG | 0.601530 | 3_4:-71398124 | None:intergenic |
ATGGTCTGGTGATGATGCAA+TGG | 0.601909 | 3_4:+71395608 | Msa0519360:CDS |
GTTGTTGCAGTTACTGGTGA+TGG | 0.601934 | 3_4:+71397282 | Msa0519360:CDS |
CTGCACCAATTGGCATGCCA+AGG | 0.603179 | 3_4:-71398770 | None:intergenic |
TGAAAAGAGCACCAGTTGGT+AGG | 0.603878 | 3_4:+71398151 | Msa0519360:CDS |
TGATATCCCATTGTTGACAC+AGG | 0.604868 | 3_4:-71394833 | None:intergenic |
ACTAGGGTATGCTTATCCAT+GGG | 0.605184 | 3_4:-71397231 | None:intergenic |
CGTGATGTGGAGGAATATCA+CGG | 0.606398 | 3_4:+71398194 | Msa0519360:CDS |
ATAATGGAAGGGTGGCCTAA+GGG | 0.606626 | 3_4:+71395018 | Msa0519360:CDS |
ATGGCTACTCTAAGTGAAGG+TGG | 0.609062 | 3_4:+71395441 | Msa0519360:CDS |
AAGAAGGTTCCCAATGGACA+TGG | 0.609528 | 3_4:+71395589 | Msa0519360:CDS |
ATCCCATCCTGTGCACCCTT+AGG | 0.610374 | 3_4:-71395033 | None:intergenic |
CTGATGGAGTCTTCATCAAG+TGG | 0.611221 | 3_4:-71396251 | None:intergenic |
TGTTGGAATGAGAACCCAGT+GGG | 0.612543 | 3_4:+71395410 | Msa0519360:CDS |
TGATAGCCCAAATTCCAAGA+TGG | 0.613677 | 3_4:-71396036 | None:intergenic |
AATGGCTCGATCTTCACCCA+TGG | 0.614750 | 3_4:+71397215 | Msa0519360:CDS |
GTTCCGTGAAATGAGTGAGA+AGG | 0.615468 | 3_4:+71396574 | Msa0519360:CDS |
TCTGGAACAAAAGTCCAGGA+TGG | 0.616165 | 3_4:+71395363 | Msa0519360:CDS |
GTATGTTTATGTAGACTGAA+CGG | 0.617413 | 3_4:-71397846 | None:intergenic |
TGTCCTCAAGTGTTTCACTA+GGG | 0.617739 | 3_4:-71397247 | None:intergenic |
AAATTTGTGCTGATGAGGCA+GGG | 0.619169 | 3_4:+71394734 | Msa0519360:CDS |
ATCTGGTTACTCCAGACAAG+AGG | 0.619802 | 3_4:+71398243 | Msa0519360:CDS |
AACATGATTATGGACACACT+TGG | 0.622533 | 3_4:+71398087 | Msa0519360:CDS |
GAAGTTGAAAATTCATGGTG+GGG | 0.622656 | 3_4:+71394783 | Msa0519360:CDS |
AATGGGCATTGCTGGAACCG+AGG | 0.623555 | 3_4:+71397350 | Msa0519360:CDS |
AGACAACATAAATACTGCAA+AGG | 0.624901 | 3_4:+71396496 | Msa0519360:CDS |
AGCTGCAAGAAGGTTCCCAA+TGG | 0.626199 | 3_4:+71395583 | Msa0519360:CDS |
TGATTGTCTGTAATCACTAG+TGG | 0.628003 | 3_4:-71395097 | None:intergenic |
GTAGGAGAAATTCAGAGTTG+CGG | 0.630233 | 3_4:+71394534 | Msa0519360:intron |
AAAAGTTGAACCGCAGTGAG+GGG | 0.632663 | 3_4:-71398057 | None:intergenic |
TGCAGCAAGAATTATTTCAG+AGG | 0.634883 | 3_4:-71396192 | None:intergenic |
TCAGTTCCAGAGACATGGAG+AGG | 0.640393 | 3_4:+71398589 | Msa0519360:CDS |
GAATCAATATTCAACAACAC+CGG | 0.643104 | 3_4:+71395951 | Msa0519360:CDS |
AATTATGATTTGGAAGATGG+CGG | 0.648036 | 3_4:-71398670 | None:intergenic |
GCAGGTAAAACTCAATGGCG+TGG | 0.648822 | 3_4:+71395482 | Msa0519360:CDS |
TACAACTCTTATGATACTTG+CGG | 0.650286 | 3_4:+71394963 | Msa0519360:CDS |
AAGCGAGTACAGAGTACCAG+AGG | 0.656350 | 3_4:+71394690 | Msa0519360:CDS |
AAATTACAGTTCAGGTCACG+CGG | 0.657255 | 3_4:+71395154 | Msa0519360:CDS |
GGTTACAGAGCACATTGCAA+GGG | 0.658013 | 3_4:+71396167 | Msa0519360:CDS |
ATACCCTAGTGAAACACTTG+AGG | 0.660631 | 3_4:+71397244 | Msa0519360:CDS |
TGGTTGGCATAATAATGGAA+GGG | 0.660640 | 3_4:+71395007 | Msa0519360:CDS |
TTAAGATGGACAATATCACC+AGG | 0.672667 | 3_4:-71395216 | None:intergenic |
TTGGCATAATAATGGAAGGG+TGG | 0.673229 | 3_4:+71395010 | Msa0519360:CDS |
TTGATGAAAAGAGCACCAGT+TGG | 0.674937 | 3_4:+71398147 | Msa0519360:CDS |
ATCGTCACTGTAGCTAAATG+GGG | 0.675315 | 3_4:+71397823 | Msa0519360:CDS |
TTATCAGTAACGTGATGTGG+AGG | 0.681192 | 3_4:+71398184 | Msa0519360:CDS |
GCTTTGAAGATGATCCCTGT+GGG | 0.689104 | 3_4:+71398792 | Msa0519360:CDS |
AAGAAGTTGAAAATTCATGG+TGG | 0.690167 | 3_4:+71394781 | Msa0519360:CDS |
CAGACTCTCGAACACCAGGA+CGG | 0.694389 | 3_4:-71396427 | None:intergenic |
TTCACTGAAAGTCCAGCCCG+GGG | 0.697317 | 3_4:+71394907 | Msa0519360:CDS |
ATAAAAGTTGAACCGCAGTG+AGG | 0.699134 | 3_4:-71398059 | None:intergenic |
TCAATATTCAACAACACCGG+AGG | 0.705540 | 3_4:+71395954 | Msa0519360:CDS |
CATTTGTGGGAAGATCAAAG+AGG | 0.719442 | 3_4:+71395860 | Msa0519360:CDS |
AGCTTTGAAGATGATCCCTG+TGG | 0.728542 | 3_4:+71398791 | Msa0519360:CDS |
TTCTATAAAGAAGCGCATGG+GGG | 0.729168 | 3_4:+71396121 | Msa0519360:CDS |
AGGAAATGCTCCCCTCACTG+CGG | 0.742396 | 3_4:+71398047 | Msa0519360:intron |
CTGTTGGAATGAGAACCCAG+TGG | 0.747284 | 3_4:+71395409 | Msa0519360:CDS |
TGATGTGGAGGAATATCACG+GGG | 0.750412 | 3_4:+71398196 | Msa0519360:CDS |
GTTGGAATGAGAACCCAGTG+GGG | 0.793979 | 3_4:+71395411 | Msa0519360:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GATTTAGTAATATATAAATT+TGG | - | chr3_4:71397471-71397490 | None:intergenic | 10.0% |
!! | ATGATTTATGATATATAAAA+TGG | + | chr3_4:71397501-71397520 | Msa0519360:intron | 10.0% |
!! | TATGCATTAAATTTAAATCA+AGG | + | chr3_4:71393646-71393665 | Msa0519360:intron | 15.0% |
!!! | TTATATTCTATTTTCCTTTT+TGG | - | chr3_4:71394022-71394041 | None:intergenic | 15.0% |
!! | AAAAAGGAAAATAGAATATA+AGG | + | chr3_4:71394021-71394040 | Msa0519360:intron | 15.0% |
!! | TTGAATTAAAAATTTAGTCA+TGG | + | chr3_4:71394361-71394380 | Msa0519360:intron | 15.0% |
!!! | ATAGTAAATCTTTAAGAATT+TGG | - | chr3_4:71396821-71396840 | None:intergenic | 15.0% |
!!! | GAAAATATTTTCGTTATTTT+TGG | - | chr3_4:71396939-71396958 | None:intergenic | 15.0% |
!! | TAAAATAAATTCAGACAATT+AGG | + | chr3_4:71398822-71398841 | Msa0519360:exon | 15.0% |
!! | AACTATGTAAAGGAAAAAAA+AGG | - | chr3_4:71392858-71392877 | None:intergenic | 20.0% |
!!! | AAAGCATTAATTTTAAGCAT+TGG | + | chr3_4:71393040-71393059 | Msa0519360:five_prime_UTR | 20.0% |
!!! | AGAATATAAGGATTCAATTT+TGG | + | chr3_4:71394033-71394052 | Msa0519360:intron | 20.0% |
!! | GGTAATTATCAAACATATAT+CGG | + | chr3_4:71394193-71394212 | Msa0519360:intron | 20.0% |
!!! | AATTTTTTGGAAATACTAAC+AGG | - | chr3_4:71394320-71394339 | None:intergenic | 20.0% |
!! | TAGTATTTCCAAAAAATTCA+AGG | + | chr3_4:71394322-71394341 | Msa0519360:intron | 20.0% |
!! | TGAGTAATATTGTAATTAGT+AGG | - | chr3_4:71394418-71394437 | None:intergenic | 20.0% |
!!! | ATTCATGATGAATTTTTAGT+TGG | + | chr3_4:71396344-71396363 | Msa0519360:CDS | 20.0% |
!!! | AAACAAATGTTTTCAGTAAA+GGG | - | chr3_4:71397159-71397178 | None:intergenic | 20.0% |
!!! | TAAACAAATGTTTTCAGTAA+AGG | - | chr3_4:71397160-71397179 | None:intergenic | 20.0% |
!!! | ACCATGAATAATTTTTTGAT+TGG | + | chr3_4:71397413-71397432 | Msa0519360:intron | 20.0% |
!! | TCCAATCAAAAAATTATTCA+TGG | - | chr3_4:71397417-71397436 | None:intergenic | 20.0% |
!!! | ATTGGAATTTTTTATGTAGA+GGG | + | chr3_4:71397431-71397450 | Msa0519360:intron | 20.0% |
!! | TTGTTGTACAGATTAAATAA+TGG | - | chr3_4:71397538-71397557 | None:intergenic | 20.0% |
!! | ATTATTTAATCTGTACAACA+AGG | + | chr3_4:71397537-71397556 | Msa0519360:intron | 20.0% |
!!! | ATAATAAGATTGGATTTTAG+AGG | - | chr3_4:71397661-71397680 | None:intergenic | 20.0% |
!! | CTAAAATCCAATCTTATTAT+TGG | + | chr3_4:71397661-71397680 | Msa0519360:intron | 20.0% |
!!! | ATTTTTTAAAGCCGTTATTT+TGG | + | chr3_4:71397740-71397759 | Msa0519360:intron | 20.0% |
!! | TATATCAATTTGTCATAATC+TGG | + | chr3_4:71398226-71398245 | Msa0519360:CDS | 20.0% |
!! | AGAATTCAACAATTATGATT+TGG | - | chr3_4:71398683-71398702 | None:intergenic | 20.0% |
!! | AATCATAATTGTTGAATTCT+TGG | + | chr3_4:71398683-71398702 | Msa0519360:CDS | 20.0% |
!! | ATCATAATTGTTGAATTCTT+GGG | + | chr3_4:71398684-71398703 | Msa0519360:CDS | 20.0% |
! | AGTTACTTGAATGAGAATTT+CGG | + | chr3_4:71393134-71393153 | Msa0519360:CDS | 25.0% |
! | TTGTTAAGAATCGTAAAAGA+AGG | + | chr3_4:71393219-71393238 | Msa0519360:CDS | 25.0% |
! | AAACTTCCTATGTTTATCTT+AGG | + | chr3_4:71393340-71393359 | Msa0519360:intron | 25.0% |
!!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr3_4:71393368-71393387 | Msa0519360:intron | 25.0% |
!! | TAGAAAATAGGCTTAGATTT+TGG | + | chr3_4:71393380-71393399 | Msa0519360:intron | 25.0% |
!! | GTTTCTCTAATAGTTTTCTT+AGG | - | chr3_4:71393462-71393481 | None:intergenic | 25.0% |
! | AACCATTAGAAAAGATTTAG+AGG | + | chr3_4:71393479-71393498 | Msa0519360:intron | 25.0% |
! | AAGGAAGTTAAGATAAACAT+AGG | - | chr3_4:71393601-71393620 | None:intergenic | 25.0% |
! | TTTGAGTATTCGTATAAACA+GGG | - | chr3_4:71393789-71393808 | None:intergenic | 25.0% |
! | ATTTGAGTATTCGTATAAAC+AGG | - | chr3_4:71393790-71393809 | None:intergenic | 25.0% |
!!! | TACTTACTTTTATTGTCGTA+GGG | + | chr3_4:71394172-71394191 | Msa0519360:intron | 25.0% |
! | TATGCAAGATAAGAGTAATA+TGG | - | chr3_4:71394296-71394315 | None:intergenic | 25.0% |
! | AAATTTAGTCATGGAAAGAT+TGG | + | chr3_4:71394370-71394389 | Msa0519360:intron | 25.0% |
!!! | GCATTTTAAAATTGTTGCAA+AGG | + | chr3_4:71394613-71394632 | Msa0519360:intron | 25.0% |
! | AATCGGAGAAAAGAAATTTA+TGG | + | chr3_4:71394874-71394893 | Msa0519360:CDS | 25.0% |
! | GAAGAAAAAAATTACAGTTC+AGG | + | chr3_4:71395146-71395165 | Msa0519360:CDS | 25.0% |
! | GATATTGTCCATCTTAATAT+CGG | + | chr3_4:71395222-71395241 | Msa0519360:CDS | 25.0% |
! | ATTTATACATACAGAGAAAC+CGG | - | chr3_4:71395280-71395299 | None:intergenic | 25.0% |
! | ATAAATGAATCAAGTTTGAC+AGG | + | chr3_4:71395294-71395313 | Msa0519360:CDS | 25.0% |
!!! | ATCGTTCATCATTTTTTTCA+TGG | - | chr3_4:71395727-71395746 | None:intergenic | 25.0% |
! | GAAAAAAATGATGAACGATA+AGG | + | chr3_4:71395728-71395747 | Msa0519360:CDS | 25.0% |
! | CGCTTCTTTATAGAATTAAA+TGG | - | chr3_4:71396116-71396135 | None:intergenic | 25.0% |
! | TGATATCATTCCAAAAATTC+AGG | + | chr3_4:71396604-71396623 | Msa0519360:CDS | 25.0% |
! | TTAAGAATTTGGCATGTTTA+TGG | - | chr3_4:71396810-71396829 | None:intergenic | 25.0% |
! | AAGTTTGAATATGCATAACA+AGG | - | chr3_4:71396881-71396900 | None:intergenic | 25.0% |
! | TTTAAATTAATAGTCACGAG+AGG | - | chr3_4:71397000-71397019 | None:intergenic | 25.0% |
!!! | TATCACTATGCTAGTTTTAA+TGG | - | chr3_4:71397053-71397072 | None:intergenic | 25.0% |
! | ACTAGCATAGTGATAATAAA+TGG | + | chr3_4:71397058-71397077 | Msa0519360:intron | 25.0% |
! | TGGATCATTTGAATATACTA+AGG | + | chr3_4:71397090-71397109 | Msa0519360:intron | 25.0% |
! | AATTTCTACCATCAATACAT+CGG | - | chr3_4:71397388-71397407 | None:intergenic | 25.0% |
!!! | GATTGGAATTTTTTATGTAG+AGG | + | chr3_4:71397430-71397449 | Msa0519360:intron | 25.0% |
! | CTAGAAACCAATAATAAGAT+TGG | - | chr3_4:71397671-71397690 | None:intergenic | 25.0% |
! | ATCATCTAGTATTATTACGT+CGG | - | chr3_4:71397791-71397810 | None:intergenic | 25.0% |
! | CTTTGATAAACATGATAACA+AGG | - | chr3_4:71397963-71397982 | None:intergenic | 25.0% |
! | GGGTATTTATATATATCATG+AGG | - | chr3_4:71398027-71398046 | None:intergenic | 25.0% |
! | CATGATATATATAAATACCC+AGG | + | chr3_4:71398027-71398046 | Msa0519360:intron | 25.0% |
! | AACTTAGAAAATCATTGTTC+TGG | + | chr3_4:71398351-71398370 | Msa0519360:intron | 25.0% |
! | ACTTAGAAAATCATTGTTCT+GGG | + | chr3_4:71398352-71398371 | Msa0519360:intron | 25.0% |
! | AATATCTTTCTAACCTTTCA+TGG | + | chr3_4:71398451-71398470 | Msa0519360:intron | 25.0% |
! | ATATCTTTCTAACCTTTCAT+GGG | + | chr3_4:71398452-71398471 | Msa0519360:intron | 25.0% |
! | TAGTTTAAACATTTACCACA+GGG | - | chr3_4:71398488-71398507 | None:intergenic | 25.0% |
! | ATAGTTTAAACATTTACCAC+AGG | - | chr3_4:71398489-71398508 | None:intergenic | 25.0% |
! | TGTGGTAAATGTTTAAACTA+TGG | + | chr3_4:71398488-71398507 | Msa0519360:intron | 25.0% |
!! | TTGTATTCAAATGTCTTGTT+AGG | + | chr3_4:71398554-71398573 | Msa0519360:intron | 25.0% |
!! | AACAATTATGATTTGGAAGA+TGG | - | chr3_4:71398676-71398695 | None:intergenic | 25.0% |
!!! | TTTCTAGCTTGAAATTTTGT+AGG | + | chr3_4:71398937-71398956 | Msa0519360:three_prime_UTR | 25.0% |
!!! | TTCTAGCTTGAAATTTTGTA+GGG | + | chr3_4:71398938-71398957 | Msa0519360:three_prime_UTR | 25.0% |
! | CGATGTATATTATATGAACT+GGG | + | chr3_4:71399050-71399069 | Msa0519360:three_prime_UTR | 25.0% |
!!! | TGAGGTACTTTTTCATTATA+CGG | + | chr3_4:71399085-71399104 | Msa0519360:three_prime_UTR | 25.0% |
GTCAAAGTGAAACTATGTAA+AGG | - | chr3_4:71392868-71392887 | None:intergenic | 30.0% | |
GCAATTAGAGCATAAATAGA+TGG | + | chr3_4:71393109-71393128 | Msa0519360:exon | 30.0% | |
TGTGAAACCGAAAAATTCAT+CGG | + | chr3_4:71393160-71393179 | Msa0519360:CDS | 30.0% | |
ATCCAGATATCATCCTAAAA+TGG | + | chr3_4:71393317-71393336 | Msa0519360:intron | 30.0% | |
!!! | TTCCATTTTAGGATGATATC+TGG | - | chr3_4:71393322-71393341 | None:intergenic | 30.0% |
! | ACATAGGAAGTTTCCATTTT+AGG | - | chr3_4:71393333-71393352 | None:intergenic | 30.0% |
ACTAAGCCTAAGATAAACAT+AGG | - | chr3_4:71393349-71393368 | None:intergenic | 30.0% | |
! | GACCTCTAAATCTTTTCTAA+TGG | - | chr3_4:71393484-71393503 | None:intergenic | 30.0% |
GTTCTATCAAAGACCATATT+TGG | - | chr3_4:71393519-71393538 | None:intergenic | 30.0% | |
TGGTCTTTGATAGAACATTA+TGG | + | chr3_4:71393523-71393542 | Msa0519360:intron | 30.0% | |
! | ATGAAAGACTGTTTTCTACA+TGG | + | chr3_4:71393753-71393772 | Msa0519360:intron | 30.0% |
ATTCACAATAACTTTCTACG+TGG | - | chr3_4:71393863-71393882 | None:intergenic | 30.0% | |
!!! | ATATGCATTGCTATTTTGCT+TGG | + | chr3_4:71393910-71393929 | Msa0519360:intron | 30.0% |
!!! | TAAGGATTCAATTTTGGCTA+TGG | + | chr3_4:71394039-71394058 | Msa0519360:intron | 30.0% |
AAAGGAAAAGGACTCAAAAT+TGG | - | chr3_4:71394078-71394097 | None:intergenic | 30.0% | |
AAAATGTGGAGGGAAATAAA+AGG | - | chr3_4:71394096-71394115 | None:intergenic | 30.0% | |
! | TATTGGGTATGAGATTTTGT+CGG | + | chr3_4:71394149-71394168 | Msa0519360:intron | 30.0% |
!! | GTACTTACTTTTATTGTCGT+AGG | + | chr3_4:71394171-71394190 | Msa0519360:intron | 30.0% |
TTTCCAAAAAATTCAAGGCA+CGG | + | chr3_4:71394327-71394346 | Msa0519360:intron | 30.0% | |
ATTTCTCCTACAATGTATAG+TGG | - | chr3_4:71394525-71394544 | None:intergenic | 30.0% | |
!!! | TTTTGAAATTTGTGCTGATG+AGG | + | chr3_4:71394729-71394748 | Msa0519360:CDS | 30.0% |
GTGAAGAAGTTGAAAATTCA+TGG | + | chr3_4:71394778-71394797 | Msa0519360:CDS | 30.0% | |
AAGAAGTTGAAAATTCATGG+TGG | + | chr3_4:71394781-71394800 | Msa0519360:CDS | 30.0% | |
AGAAGTTGAAAATTCATGGT+GGG | + | chr3_4:71394782-71394801 | Msa0519360:CDS | 30.0% | |
TACAACTCTTATGATACTTG+CGG | + | chr3_4:71394963-71394982 | Msa0519360:CDS | 30.0% | |
TTTAGTGGTTGGCATAATAA+TGG | + | chr3_4:71395002-71395021 | Msa0519360:CDS | 30.0% | |
TCAATATATGATCTACTTCC+TGG | + | chr3_4:71395198-71395217 | Msa0519360:CDS | 30.0% | |
CAGATAGAAGAAAAGGATTA+AGG | - | chr3_4:71395347-71395366 | None:intergenic | 30.0% | |
! | CTTAATCCTTTTCTTCTATC+TGG | + | chr3_4:71395345-71395364 | Msa0519360:CDS | 30.0% |
TTTGTTCCAGATAGAAGAAA+AGG | - | chr3_4:71395354-71395373 | None:intergenic | 30.0% | |
GCTACCATTATTGGAAAAAT+AGG | + | chr3_4:71395504-71395523 | Msa0519360:CDS | 30.0% | |
!!! | TTTTTTTCATGGCAAAAGCA+AGG | - | chr3_4:71395716-71395735 | None:intergenic | 30.0% |
! | AAGCTTTTACAACAGTCATA+TGG | - | chr3_4:71395839-71395858 | None:intergenic | 30.0% |
TTGTAAAAGCTTGCATTTGT+GGG | + | chr3_4:71395847-71395866 | Msa0519360:CDS | 30.0% | |
GAATCAATATTCAACAACAC+CGG | + | chr3_4:71395951-71395970 | Msa0519360:CDS | 30.0% | |
GAAGTGGTCAAAAATGAAAA+TGG | + | chr3_4:71395978-71395997 | Msa0519360:CDS | 30.0% | |
AAATGGAAAGATTGAGATTC+TGG | + | chr3_4:71395995-71396014 | Msa0519360:CDS | 30.0% | |
AATGGAAAGATTGAGATTCT+GGG | + | chr3_4:71395996-71396015 | Msa0519360:CDS | 30.0% | |
! | TAATTCTATAAAGAAGCGCA+TGG | + | chr3_4:71396118-71396137 | Msa0519360:CDS | 30.0% |
! | AATTCTATAAAGAAGCGCAT+GGG | + | chr3_4:71396119-71396138 | Msa0519360:CDS | 30.0% |
GACAAATTTGTAGACTCAAA+TGG | + | chr3_4:71396218-71396237 | Msa0519360:CDS | 30.0% | |
CATGAATATCAATGTAAGCA+AGG | - | chr3_4:71396331-71396350 | None:intergenic | 30.0% | |
GTGTAACCATTAATAGGAAT+AGG | - | chr3_4:71396374-71396393 | None:intergenic | 30.0% | |
ACACAAGTGTAACCATTAAT+AGG | - | chr3_4:71396380-71396399 | None:intergenic | 30.0% | |
ATTAATGGTTACACTTGTGT+AGG | + | chr3_4:71396380-71396399 | Msa0519360:CDS | 30.0% | |
AGACAACATAAATACTGCAA+AGG | + | chr3_4:71396496-71396515 | Msa0519360:CDS | 30.0% | |
! | TTGATATGCACCTGAATTTT+TGG | - | chr3_4:71396617-71396636 | None:intergenic | 30.0% |
! | TTGCTTGACAATTTGTTTGA+AGG | + | chr3_4:71396671-71396690 | Msa0519360:intron | 30.0% |
!! | TAACTAGACCTTTTAATTCC+AGG | - | chr3_4:71396780-71396799 | None:intergenic | 30.0% |
GAATTAAAAGGTCTAGTTAG+AGG | + | chr3_4:71396781-71396800 | Msa0519360:intron | 30.0% | |
! | AACGAAAATATTTTCTCGCT+AGG | + | chr3_4:71396944-71396963 | Msa0519360:intron | 30.0% |
AAAAGAGCCATATGATTACA+TGG | + | chr3_4:71397017-71397036 | Msa0519360:intron | 30.0% | |
TCAACATCCATGTAATCATA+TGG | - | chr3_4:71397027-71397046 | None:intergenic | 30.0% | |
!! | ATAATAAATGGACTGAGTGA+TGG | + | chr3_4:71397070-71397089 | Msa0519360:intron | 30.0% |
ATCAATATGTCTAAATCTGC+AGG | + | chr3_4:71397191-71397210 | Msa0519360:intron | 30.0% | |
! | GTAATTTAGCTTATACCAAG+TGG | + | chr3_4:71397559-71397578 | Msa0519360:intron | 30.0% |
ACCTGAAATTGCCAAAATAA+CGG | - | chr3_4:71397754-71397773 | None:intergenic | 30.0% | |
GTATGTTTATGTAGACTGAA+CGG | - | chr3_4:71397849-71397868 | None:intergenic | 30.0% | |
TTTATGGGTCAACATGATTA+TGG | + | chr3_4:71398077-71398096 | Msa0519360:CDS | 30.0% | |
! | CTTTTCATCAACTCATCATT+AGG | - | chr3_4:71398138-71398157 | None:intergenic | 30.0% |
! | AAAACAGCTTTTCATCTTGA+TGG | + | chr3_4:71398267-71398286 | Msa0519360:CDS | 30.0% |
TTCAATATCAGATCACTATC+CGG | - | chr3_4:71398294-71398313 | None:intergenic | 30.0% | |
CAATTCATTTGTATTCTGTC+AGG | + | chr3_4:71398326-71398345 | Msa0519360:CDS | 30.0% | |
CAATCAGAGAACATATTACA+AGG | - | chr3_4:71398516-71398535 | None:intergenic | 30.0% | |
CAAGACATTTGAATACAAGT+AGG | - | chr3_4:71398552-71398571 | None:intergenic | 30.0% | |
!! | GAGAGGATAAATGTTTTTGA+AGG | + | chr3_4:71398606-71398625 | Msa0519360:CDS | 30.0% |
CTGTGAACACATAATTCTTT+AGG | - | chr3_4:71398635-71398654 | None:intergenic | 30.0% | |
! | AATTATGATTTGGAAGATGG+CGG | - | chr3_4:71398673-71398692 | None:intergenic | 30.0% |
AGAAAAACACTTGGTTCAAT+CGG | - | chr3_4:71398922-71398941 | None:intergenic | 30.0% | |
TTTCAAGCTAGAAAAACACT+TGG | - | chr3_4:71398931-71398950 | None:intergenic | 30.0% | |
AACTGAGTAGAGACTAAATT+TGG | + | chr3_4:71398962-71398981 | Msa0519360:three_prime_UTR | 30.0% | |
! | CTAAATTTGGTATTTGTTGC+TGG | + | chr3_4:71398975-71398994 | Msa0519360:three_prime_UTR | 30.0% |
GCGATGTATATTATATGAAC+TGG | + | chr3_4:71399049-71399068 | Msa0519360:three_prime_UTR | 30.0% | |
! | ACTGGGATTTTTGTATAATG+AGG | + | chr3_4:71399067-71399086 | Msa0519360:three_prime_UTR | 30.0% |
!!! | GAGGTACTTTTTCATTATAC+GGG | + | chr3_4:71399086-71399105 | Msa0519360:three_prime_UTR | 30.0% |
!!! | AGGTACTTTTTCATTATACG+GGG | + | chr3_4:71399087-71399106 | Msa0519360:three_prime_UTR | 30.0% |
! | GCTTCTTCCGATGAATTTTT+CGG | - | chr3_4:71393170-71393189 | None:intergenic | 35.0% |
! | AGCTTCAGCTTCAAATCTTT+TGG | - | chr3_4:71393267-71393286 | None:intergenic | 35.0% |
CTTAGGCTTAGTAGAAAAGT+TGG | + | chr3_4:71393357-71393376 | Msa0519360:intron | 35.0% | |
ATTTGATCTACTTACCGTCT+AGG | - | chr3_4:71393414-71393433 | None:intergenic | 35.0% | |
TAGACGGTAAGTAGATCAAA+TGG | + | chr3_4:71393413-71393432 | Msa0519360:intron | 35.0% | |
AGATTTAGAGGTCAATGAGT+TGG | + | chr3_4:71393491-71393510 | Msa0519360:intron | 35.0% | |
! | CAATGAGTTGGATCCAAATA+TGG | + | chr3_4:71393503-71393522 | Msa0519360:intron | 35.0% |
CATTGAGATTAGTGAACAGA+AGG | - | chr3_4:71393620-71393639 | None:intergenic | 35.0% | |
!!! | GGTAGTAGTTTTGATGTGAA+TGG | - | chr3_4:71393715-71393734 | None:intergenic | 35.0% |
CATTGAATGTAATGCAGTAG+TGG | - | chr3_4:71393736-71393755 | None:intergenic | 35.0% | |
TCCTTATTATCCGTAGAAAC+CGG | + | chr3_4:71393826-71393845 | Msa0519360:intron | 35.0% | |
TTTGGCAGACAAAAGACTAA+GGG | - | chr3_4:71394004-71394023 | None:intergenic | 35.0% | |
! | TTTTGGCAGACAAAAGACTA+AGG | - | chr3_4:71394005-71394024 | None:intergenic | 35.0% |
! | TAGTCTTTTGTCTGCCAAAA+AGG | + | chr3_4:71394005-71394024 | Msa0519360:intron | 35.0% |
AAGGACTCAAAATTGGCAAT+GGG | - | chr3_4:71394071-71394090 | None:intergenic | 35.0% | |
AAAGGACTCAAAATTGGCAA+TGG | - | chr3_4:71394072-71394091 | None:intergenic | 35.0% | |
TGGAGGGAAATAAAAGGAAA+AGG | - | chr3_4:71394090-71394109 | None:intergenic | 35.0% | |
! | GTTAGTCTGAAAAATGTGGA+GGG | - | chr3_4:71394106-71394125 | None:intergenic | 35.0% |
! | AGTTAGTCTGAAAAATGTGG+AGG | - | chr3_4:71394107-71394126 | None:intergenic | 35.0% |
! | AGCAGTTAGTCTGAAAAATG+TGG | - | chr3_4:71394110-71394129 | None:intergenic | 35.0% |
ATCTCATACCCAATACAACA+TGG | - | chr3_4:71394144-71394163 | None:intergenic | 35.0% | |
AAACAAGTCCAAACTAAGCA+TGG | - | chr3_4:71394257-71394276 | None:intergenic | 35.0% | |
TTCCAAAAAATTCAAGGCAC+GGG | + | chr3_4:71394328-71394347 | Msa0519360:intron | 35.0% | |
GTAATTAGTAGGATAGTGAG+AGG | - | chr3_4:71394407-71394426 | None:intergenic | 35.0% | |
! | GTAGATTGACTTTCTTACCA+TGG | - | chr3_4:71394591-71394610 | None:intergenic | 35.0% |
GAAGTTGAAAATTCATGGTG+GGG | + | chr3_4:71394783-71394802 | Msa0519360:CDS | 35.0% | |
TCAATTCCTGTGTCAACAAT+GGG | + | chr3_4:71394827-71394846 | Msa0519360:CDS | 35.0% | |
! | TCTTTTCTCCGATTCAGTAA+AGG | - | chr3_4:71394868-71394887 | None:intergenic | 35.0% |
! | TGGTTGGCATAATAATGGAA+GGG | + | chr3_4:71395007-71395026 | Msa0519360:CDS | 35.0% |
TGATTGTCTGTAATCACTAG+TGG | - | chr3_4:71395100-71395119 | None:intergenic | 35.0% | |
CAGACAATCATTGCAGTTTA+AGG | + | chr3_4:71395110-71395129 | Msa0519360:CDS | 35.0% | |
TTAAGATGGACAATATCACC+AGG | - | chr3_4:71395219-71395238 | None:intergenic | 35.0% | |
CTTGATCTCCGATATTAAGA+TGG | - | chr3_4:71395233-71395252 | None:intergenic | 35.0% | |
!! | GAGGCCTATTTTTCCAATAA+TGG | - | chr3_4:71395511-71395530 | None:intergenic | 35.0% |
! | TGATGATGCAATGGAAATTG+TGG | + | chr3_4:71395617-71395636 | Msa0519360:CDS | 35.0% |
GTTGTAAAAGCTTGCATTTG+TGG | + | chr3_4:71395846-71395865 | Msa0519360:CDS | 35.0% | |
AGAATTGCTATAGCAGAATC+AGG | - | chr3_4:71395927-71395946 | None:intergenic | 35.0% | |
! | ATTCTATAAAGAAGCGCATG+GGG | + | chr3_4:71396120-71396139 | Msa0519360:CDS | 35.0% |
TGCAGCAAGAATTATTTCAG+AGG | - | chr3_4:71396195-71396214 | None:intergenic | 35.0% | |
TGTATCATTCAAGTGACTGA+TGG | - | chr3_4:71396270-71396289 | None:intergenic | 35.0% | |
ATCAATGTAAGCAAGGCAAA+GGG | - | chr3_4:71396324-71396343 | None:intergenic | 35.0% | |
TATCAATGTAAGCAAGGCAA+AGG | - | chr3_4:71396325-71396344 | None:intergenic | 35.0% | |
GGAAGTCCTATTCCTATTAA+TGG | + | chr3_4:71396365-71396384 | Msa0519360:CDS | 35.0% | |
TTACACTTGTGTAGGAATAG+TGG | + | chr3_4:71396388-71396407 | Msa0519360:CDS | 35.0% | |
TACACTTGTGTAGGAATAGT+GGG | + | chr3_4:71396389-71396408 | Msa0519360:CDS | 35.0% | |
ATTACAGTTAGGATGGTTAC+CGG | + | chr3_4:71396473-71396492 | Msa0519360:CDS | 35.0% | |
TGCAGTATTTATGTTGTCTC+CGG | - | chr3_4:71396495-71396514 | None:intergenic | 35.0% | |
!! | GAATGTGGAATTTTAACCGA+TGG | + | chr3_4:71396530-71396549 | Msa0519360:CDS | 35.0% |
!! | TGGAATTTTAACCGATGGTA+TGG | + | chr3_4:71396535-71396554 | Msa0519360:CDS | 35.0% |
ATTCCTTCTCACTCATTTCA+CGG | - | chr3_4:71396580-71396599 | None:intergenic | 35.0% | |
!! | TCTTACCAGAGTTTGAGTTT+TGG | + | chr3_4:71396703-71396722 | Msa0519360:intron | 35.0% |
! | TTTGGCGTGCATTTCTTTTA+AGG | + | chr3_4:71396721-71396740 | Msa0519360:intron | 35.0% |
! | TTGGCGTGCATTTCTTTTAA+GGG | + | chr3_4:71396722-71396741 | Msa0519360:intron | 35.0% |
! | GCATAACAAGGATTTTGCAT+AGG | - | chr3_4:71396869-71396888 | None:intergenic | 35.0% |
!!! | CACTATGCTAGTTTTAATGG+CGG | - | chr3_4:71397050-71397069 | None:intergenic | 35.0% |
ATGTCTAAATCTGCAGGTAA+TGG | + | chr3_4:71397197-71397216 | Msa0519360:intron | 35.0% | |
CACTTCATGAAGCAGATATT+GGG | + | chr3_4:71397322-71397341 | Msa0519360:CDS | 35.0% | |
TCTTCATACCGATGTATTGA+TGG | + | chr3_4:71397377-71397396 | Msa0519360:intron | 35.0% | |
TGAACAAAAACTTCTCCACT+TGG | - | chr3_4:71397577-71397596 | None:intergenic | 35.0% | |
ATAGAACGACAACTAGCTAA+GGG | - | chr3_4:71397708-71397727 | None:intergenic | 35.0% | |
TATAGAACGACAACTAGCTA+AGG | - | chr3_4:71397709-71397728 | None:intergenic | 35.0% | |
TATCGTCACTGTAGCTAAAT+GGG | + | chr3_4:71397822-71397841 | Msa0519360:CDS | 35.0% | |
CAACAACATTTACAGTTAGC+TGG | - | chr3_4:71397888-71397907 | None:intergenic | 35.0% | |
AACATGATTATGGACACACT+TGG | + | chr3_4:71398087-71398106 | Msa0519360:CDS | 35.0% | |
TTCATCAACTCATCATTAGG+AGG | - | chr3_4:71398135-71398154 | None:intergenic | 35.0% | |
ACTTTATCAGTAACGTGATG+TGG | + | chr3_4:71398181-71398200 | Msa0519360:CDS | 35.0% | |
TCAATATCAGATCACTATCC+GGG | - | chr3_4:71398293-71398312 | None:intergenic | 35.0% | |
AACCACAGTTTCAAACTTAG+AGG | - | chr3_4:71398729-71398748 | None:intergenic | 35.0% | |
!! | TATTTTAGACAGATCCCACA+GGG | - | chr3_4:71398809-71398828 | None:intergenic | 35.0% |
!!! | TTATTTTAGACAGATCCCAC+AGG | - | chr3_4:71398810-71398829 | None:intergenic | 35.0% |
CAGACAATTAGGTACATTCT+TGG | + | chr3_4:71398833-71398852 | Msa0519360:three_prime_UTR | 35.0% | |
CTGTTCTCACATGAAAATCA+AGG | + | chr3_4:71398863-71398882 | Msa0519360:three_prime_UTR | 35.0% | |
AGCTATTAGACGCTCTAATC+AGG | + | chr3_4:71393283-71393302 | Msa0519360:CDS | 40.0% | |
! | TTTTGGACATGAGACCTAGA+CGG | + | chr3_4:71393397-71393416 | Msa0519360:intron | 40.0% |
ACGGTAAGTAGATCAAATGG+AGG | + | chr3_4:71393416-71393435 | Msa0519360:intron | 40.0% | |
TTCGTATAAACAGGGAGTTC+TGG | - | chr3_4:71393781-71393800 | None:intergenic | 40.0% | |
TCCGGTTTCTACGGATAATA+AGG | - | chr3_4:71393830-71393849 | None:intergenic | 40.0% | |
!!! | GCATTGCTATTTTGCTTGGT+TGG | + | chr3_4:71393914-71393933 | Msa0519360:intron | 40.0% |
TCCTGTCTTCCATGTTGTAT+TGG | + | chr3_4:71394132-71394151 | Msa0519360:intron | 40.0% | |
CCTGTCTTCCATGTTGTATT+GGG | + | chr3_4:71394133-71394152 | Msa0519360:intron | 40.0% | |
AGTCCAAACTAAGCATGGAA+GGG | - | chr3_4:71394252-71394271 | None:intergenic | 40.0% | |
AAGTCCAAACTAAGCATGGA+AGG | - | chr3_4:71394253-71394272 | None:intergenic | 40.0% | |
!!! | AACCCGTGCCTTGAATTTTT+TGG | - | chr3_4:71394333-71394352 | None:intergenic | 40.0% |
!! | ACTCAAATAGCCTAGCTTTG+TGG | + | chr3_4:71394433-71394452 | Msa0519360:intron | 40.0% |
!! | CTCAAATAGCCTAGCTTTGT+GGG | + | chr3_4:71394434-71394453 | Msa0519360:intron | 40.0% |
!! | TCAAATAGCCTAGCTTTGTG+GGG | + | chr3_4:71394435-71394454 | Msa0519360:intron | 40.0% |
TACAATGTATAGTGGTGGCA+GGG | - | chr3_4:71394517-71394536 | None:intergenic | 40.0% | |
TCTCCTACAATGTATAGTGG+TGG | - | chr3_4:71394522-71394541 | None:intergenic | 40.0% | |
GTAGGAGAAATTCAGAGTTG+CGG | + | chr3_4:71394534-71394553 | Msa0519360:intron | 40.0% | |
AGTAAGTATTTACTCCCTCC+AGG | + | chr3_4:71394655-71394674 | Msa0519360:intron | 40.0% | |
TTGACAAACTTAAGCCTGGA+GGG | - | chr3_4:71394672-71394691 | None:intergenic | 40.0% | |
! | AAATTTGTGCTGATGAGGCA+GGG | + | chr3_4:71394734-71394753 | Msa0519360:CDS | 40.0% |
! | AAAATTCATGGTGGGGTTGA+GGG | + | chr3_4:71394790-71394809 | Msa0519360:CDS | 40.0% |
GACACAGGAATTGAGTTTGT+CGG | - | chr3_4:71394821-71394840 | None:intergenic | 40.0% | |
CTCAATTCCTGTGTCAACAA+TGG | + | chr3_4:71394826-71394845 | Msa0519360:CDS | 40.0% | |
TGATATCCCATTGTTGACAC+AGG | - | chr3_4:71394836-71394855 | None:intergenic | 40.0% | |
ATACGAAAACCCAAAATCCC+CGG | - | chr3_4:71394927-71394946 | None:intergenic | 40.0% | |
!!! | GGGATTTTGGGTTTTCGTAT+GGG | + | chr3_4:71394927-71394946 | Msa0519360:CDS | 40.0% |
! | CTGTGCTTTTGTCTCTTTAG+TGG | + | chr3_4:71394987-71395006 | Msa0519360:CDS | 40.0% |
! | GCTTTTGTCTCTTTAGTGGT+TGG | + | chr3_4:71394991-71395010 | Msa0519360:CDS | 40.0% |
! | GTGGTTGGCATAATAATGGA+AGG | + | chr3_4:71395006-71395025 | Msa0519360:CDS | 40.0% |
! | TTGGCATAATAATGGAAGGG+TGG | + | chr3_4:71395010-71395029 | Msa0519360:CDS | 40.0% |
AAATTACAGTTCAGGTCACG+CGG | + | chr3_4:71395154-71395173 | Msa0519360:CDS | 40.0% | |
! | TCTATCTGGAACAAAAGTCC+AGG | + | chr3_4:71395359-71395378 | Msa0519360:CDS | 40.0% |
AAGATGCTTGTGACTACTGT+TGG | + | chr3_4:71395393-71395412 | Msa0519360:CDS | 40.0% | |
CTAATGGCTACTCTAAGTGA+AGG | + | chr3_4:71395438-71395457 | Msa0519360:CDS | 40.0% | |
! | CCATTGAGTTTTACCTGCAA+GGG | - | chr3_4:71395480-71395499 | None:intergenic | 40.0% |
AAGTCACAACAGCGAAAAAG+AGG | - | chr3_4:71395530-71395549 | None:intergenic | 40.0% | |
TGTTGTGACTTTCTCAGTGT+TGG | + | chr3_4:71395539-71395558 | Msa0519360:CDS | 40.0% | |
ACAGCTAAAGGTAAACCTTC+AGG | - | chr3_4:71395684-71395703 | None:intergenic | 40.0% | |
CATTTGTGGGAAGATCAAAG+AGG | + | chr3_4:71395860-71395879 | Msa0519360:CDS | 40.0% | |
TGAGAAATCAGAAGAGTCGA+TGG | - | chr3_4:71395895-71395914 | None:intergenic | 40.0% | |
TCAATATTCAACAACACCGG+AGG | + | chr3_4:71395954-71395973 | Msa0519360:CDS | 40.0% | |
! | ATTTTTGACCACTTCACCTC+CGG | - | chr3_4:71395973-71395992 | None:intergenic | 40.0% |
AGACTGCCATCTTGGAATTT+GGG | + | chr3_4:71396030-71396049 | Msa0519360:CDS | 40.0% | |
TGATAGCCCAAATTCCAAGA+TGG | - | chr3_4:71396039-71396058 | None:intergenic | 40.0% | |
TTGGAATTTGGGCTATCACT+TGG | + | chr3_4:71396041-71396060 | Msa0519360:CDS | 40.0% | |
TTGATGCTTGTCGTTCTTTG+TGG | - | chr3_4:71396076-71396095 | None:intergenic | 40.0% | |
! | TTCTATAAAGAAGCGCATGG+GGG | + | chr3_4:71396121-71396140 | Msa0519360:CDS | 40.0% |
AATTTGCCAATGAAGCTCTC+CGG | + | chr3_4:71396297-71396316 | Msa0519360:CDS | 40.0% | |
! | TGGCGTGCATTTCTTTTAAG+GGG | + | chr3_4:71396723-71396742 | Msa0519360:intron | 40.0% |
!! | GTGCATTTCTTTTAAGGGGT+GGG | + | chr3_4:71396727-71396746 | Msa0519360:intron | 40.0% |
!! | TGCATTTCTTTTAAGGGGTG+GGG | + | chr3_4:71396728-71396747 | Msa0519360:intron | 40.0% |
!! | CTTGGTGTCCTGGAATTAAA+AGG | + | chr3_4:71396769-71396788 | Msa0519360:intron | 40.0% |
ACTAGGGTATGCTTATCCAT+GGG | - | chr3_4:71397234-71397253 | None:intergenic | 40.0% | |
ATACCCTAGTGAAACACTTG+AGG | + | chr3_4:71397244-71397263 | Msa0519360:CDS | 40.0% | |
TGTCCTCAAGTGTTTCACTA+GGG | - | chr3_4:71397250-71397269 | None:intergenic | 40.0% | |
TTGTCCTCAAGTGTTTCACT+AGG | - | chr3_4:71397251-71397270 | None:intergenic | 40.0% | |
CTTGAGGACAACATTTGAAG+AGG | + | chr3_4:71397260-71397279 | Msa0519360:CDS | 40.0% | |
ATATCTGCTTCATGAAGTGC+TGG | - | chr3_4:71397321-71397340 | None:intergenic | 40.0% | |
GCACTTCATGAAGCAGATAT+TGG | + | chr3_4:71397321-71397340 | Msa0519360:CDS | 40.0% | |
GCTAGTTGTCGTTCTATACT+TGG | + | chr3_4:71397711-71397730 | Msa0519360:intron | 40.0% | |
!!! | GCCGTTATTTTGGCAATTTC+AGG | + | chr3_4:71397750-71397769 | Msa0519360:intron | 40.0% |
CTATCGTCACTGTAGCTAAA+TGG | + | chr3_4:71397821-71397840 | Msa0519360:CDS | 40.0% | |
ATCGTCACTGTAGCTAAATG+GGG | + | chr3_4:71397823-71397842 | Msa0519360:CDS | 40.0% | |
TTCACTTCTGCTTGTTTGAC+AGG | + | chr3_4:71397922-71397941 | Msa0519360:CDS | 40.0% | |
TAAAAGTTGAACCGCAGTGA+GGG | - | chr3_4:71398061-71398080 | None:intergenic | 40.0% | |
ATAAAAGTTGAACCGCAGTG+AGG | - | chr3_4:71398062-71398081 | None:intergenic | 40.0% | |
! | TCACTGCGGTTCAACTTTTA+TGG | + | chr3_4:71398061-71398080 | Msa0519360:CDS | 40.0% |
! | CACTGCGGTTCAACTTTTAT+GGG | + | chr3_4:71398062-71398081 | Msa0519360:CDS | 40.0% |
!! | TTGATGAAAAGAGCACCAGT+TGG | + | chr3_4:71398147-71398166 | Msa0519360:CDS | 40.0% |
AAGTTTCCTTTCCTACCAAC+TGG | - | chr3_4:71398165-71398184 | None:intergenic | 40.0% | |
TTATCAGTAACGTGATGTGG+AGG | + | chr3_4:71398184-71398203 | Msa0519360:CDS | 40.0% | |
!!! | AAGCTGTTTTTCCTCTTGTC+TGG | - | chr3_4:71398257-71398276 | None:intergenic | 40.0% |
ATTTATCCTCTCCATGTCTC+TGG | - | chr3_4:71398598-71398617 | None:intergenic | 40.0% | |
CAAACTTAGAGGAGATGTGT+TGG | - | chr3_4:71398718-71398737 | None:intergenic | 40.0% | |
! | CTCCTCTAAGTTTGAAACTG+TGG | + | chr3_4:71398724-71398743 | Msa0519360:CDS | 40.0% |
! | TGGTTCATTAGCGTTTTCCT+TGG | + | chr3_4:71398744-71398763 | Msa0519360:CDS | 40.0% |
ATCTTCAAAGCTGCACCAAT+TGG | - | chr3_4:71398783-71398802 | None:intergenic | 40.0% | |
!! | AAGAAGCACTTCAGAGATGG+AGG | + | chr3_4:71393183-71393202 | Msa0519360:CDS | 45.0% |
! | AGAGATGGAGGAAGCTTTGT+TGG | + | chr3_4:71393195-71393214 | Msa0519360:CDS | 45.0% |
!! | GAGATGGAGGAAGCTTTGTT+GGG | + | chr3_4:71393196-71393215 | Msa0519360:CDS | 45.0% |
AGATCAAATGGAGGAGAGTC+AGG | + | chr3_4:71393425-71393444 | Msa0519360:intron | 45.0% | |
GAGGAGAGTCAGGTTAAAAG+AGG | + | chr3_4:71393435-71393454 | Msa0519360:intron | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | - | chr3_4:71393569-71393588 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | - | chr3_4:71393570-71393589 | None:intergenic | 45.0% |
! | ACAAGCCTTATCCCACTAAG+TGG | - | chr3_4:71393571-71393590 | None:intergenic | 45.0% |
ACCAGAACTTCCGGTTTCTA+CGG | - | chr3_4:71393839-71393858 | None:intergenic | 45.0% | |
CCCAATACAACATGGAAGAC+AGG | - | chr3_4:71394136-71394155 | None:intergenic | 45.0% | |
!! | CTTTTTCACCCCACAAAGCT+AGG | - | chr3_4:71394446-71394465 | None:intergenic | 45.0% |
!! | CTAGCTTTGTGGGGTGAAAA+AGG | + | chr3_4:71394444-71394463 | Msa0519360:intron | 45.0% |
TTGTGGGGTGAAAAAGGACA+TGG | + | chr3_4:71394450-71394469 | Msa0519360:intron | 45.0% | |
CTACAATGTATAGTGGTGGC+AGG | - | chr3_4:71394518-71394537 | None:intergenic | 45.0% | |
CTGCCACCACTATACATTGT+AGG | + | chr3_4:71394516-71394535 | Msa0519360:intron | 45.0% | |
GAAATTCAGAGTTGCGGTGT+TGG | + | chr3_4:71394540-71394559 | Msa0519360:CDS | 45.0% | |
GCTGCACTTCAGTTTATCCA+TGG | + | chr3_4:71394571-71394590 | Msa0519360:CDS | 45.0% | |
CTTGACAAACTTAAGCCTGG+AGG | - | chr3_4:71394673-71394692 | None:intergenic | 45.0% | |
TCGCTTGACAAACTTAAGCC+TGG | - | chr3_4:71394676-71394695 | None:intergenic | 45.0% | |
! | GAAATTTGTGCTGATGAGGC+AGG | + | chr3_4:71394733-71394752 | Msa0519360:CDS | 45.0% |
! | GAAAATTCATGGTGGGGTTG+AGG | + | chr3_4:71394789-71394808 | Msa0519360:CDS | 45.0% |
CATCCGAGCCTTTACTGAAT+CGG | + | chr3_4:71394857-71394876 | Msa0519360:CDS | 45.0% | |
TCTCCGATTCAGTAAAGGCT+CGG | - | chr3_4:71394863-71394882 | None:intergenic | 45.0% | |
AATTCACTGAAAGTCCAGCC+CGG | + | chr3_4:71394905-71394924 | Msa0519360:CDS | 45.0% | |
TACGAAAACCCAAAATCCCC+GGG | - | chr3_4:71394926-71394945 | None:intergenic | 45.0% | |
!!! | GGGGATTTTGGGTTTTCGTA+TGG | + | chr3_4:71394926-71394945 | Msa0519360:CDS | 45.0% |
! | AATAATGGAAGGGTGGCCTA+AGG | + | chr3_4:71395017-71395036 | Msa0519360:CDS | 45.0% |
! | ATAATGGAAGGGTGGCCTAA+GGG | + | chr3_4:71395018-71395037 | Msa0519360:CDS | 45.0% |
ACACAAAAAGCCCATCAGCA+GGG | - | chr3_4:71395257-71395276 | None:intergenic | 45.0% | |
TTAAGGTCACTGACGTTCAC+TGG | - | chr3_4:71395330-71395349 | None:intergenic | 45.0% | |
! | TCTGGAACAAAAGTCCAGGA+TGG | + | chr3_4:71395363-71395382 | Msa0519360:CDS | 45.0% |
TGTTGGAATGAGAACCCAGT+GGG | + | chr3_4:71395410-71395429 | Msa0519360:CDS | 45.0% | |
AACCCAGTGGGGTAAACTAA+TGG | + | chr3_4:71395422-71395441 | Msa0519360:CDS | 45.0% | |
! | AGCCATTAGTTTACCCCACT+GGG | - | chr3_4:71395427-71395446 | None:intergenic | 45.0% |
! | TAGCCATTAGTTTACCCCAC+TGG | - | chr3_4:71395428-71395447 | None:intergenic | 45.0% |
ATGGCTACTCTAAGTGAAGG+TGG | + | chr3_4:71395441-71395460 | Msa0519360:CDS | 45.0% | |
AGATGATGAAACTCCCTTGC+AGG | + | chr3_4:71395464-71395483 | Msa0519360:CDS | 45.0% | |
CCCTTGCAGGTAAAACTCAA+TGG | + | chr3_4:71395477-71395496 | Msa0519360:CDS | 45.0% | |
! | GCCATTGAGTTTTACCTGCA+AGG | - | chr3_4:71395481-71395500 | None:intergenic | 45.0% |
AATGGCGTGGCTACCATTAT+TGG | + | chr3_4:71395495-71395514 | Msa0519360:CDS | 45.0% | |
!! | ACTTTCTCAGTGTTGGTCCA+AGG | + | chr3_4:71395546-71395565 | Msa0519360:CDS | 45.0% |
!! | CTTTCTCAGTGTTGGTCCAA+GGG | + | chr3_4:71395547-71395566 | Msa0519360:CDS | 45.0% |
AAGAAGGTTCCCAATGGACA+TGG | + | chr3_4:71395589-71395608 | Msa0519360:CDS | 45.0% | |
ATCACCAGACCATGTCCATT+GGG | - | chr3_4:71395601-71395620 | None:intergenic | 45.0% | |
! | ATGGTCTGGTGATGATGCAA+TGG | + | chr3_4:71395608-71395627 | Msa0519360:CDS | 45.0% |
! | GTTGTTGTTGCTGTTCCTGA+AGG | + | chr3_4:71395666-71395685 | Msa0519360:CDS | 45.0% |
AGGCTCAATGTCACAGCTAA+AGG | - | chr3_4:71395696-71395715 | None:intergenic | 45.0% | |
TCTCACAAGCAGCCAAATGA+CGG | - | chr3_4:71395761-71395780 | None:intergenic | 45.0% | |
TTTGGCTGCTTGTGAGACAA+TGG | + | chr3_4:71395764-71395783 | Msa0519360:CDS | 45.0% | |
TTGGCTGCTTGTGAGACAAT+GGG | + | chr3_4:71395765-71395784 | Msa0519360:CDS | 45.0% | |
ACTATCTGCAGTGACAAGAC+TGG | + | chr3_4:71395798-71395817 | Msa0519360:CDS | 45.0% | |
GAGACTGCCATCTTGGAATT+TGG | + | chr3_4:71396029-71396048 | Msa0519360:CDS | 45.0% | |
GAATTTGGGCTATCACTTGG+TGG | + | chr3_4:71396044-71396063 | Msa0519360:CDS | 45.0% | |
! | GTAGTTCTACAGCTTCCTGA+TGG | + | chr3_4:71396143-71396162 | Msa0519360:CDS | 45.0% |
TGGTTACAGAGCACATTGCA+AGG | + | chr3_4:71396166-71396185 | Msa0519360:CDS | 45.0% | |
GGTTACAGAGCACATTGCAA+GGG | + | chr3_4:71396167-71396186 | Msa0519360:CDS | 45.0% | |
CTGATGGAGTCTTCATCAAG+TGG | - | chr3_4:71396254-71396273 | None:intergenic | 45.0% | |
ATTAAAGATCCAGTCCGTCC+TGG | + | chr3_4:71396413-71396432 | Msa0519360:CDS | 45.0% | |
GAGAGTCTGTAGCCATTTGT+AGG | + | chr3_4:71396441-71396460 | Msa0519360:CDS | 45.0% | |
GTCTGTAGCCATTTGTAGGT+CGG | + | chr3_4:71396445-71396464 | Msa0519360:CDS | 45.0% | |
AATACCAGCCGACCTACAAA+TGG | - | chr3_4:71396456-71396475 | None:intergenic | 45.0% | |
GGCTGGTATTACAGTTAGGA+TGG | + | chr3_4:71396466-71396485 | Msa0519360:CDS | 45.0% | |
AAGGCGATTGCTAGAGAATG+TGG | + | chr3_4:71396515-71396534 | Msa0519360:CDS | 45.0% | |
TCACTCATTTCACGGAACTC+CGG | - | chr3_4:71396572-71396591 | None:intergenic | 45.0% | |
GTTCCGTGAAATGAGTGAGA+AGG | + | chr3_4:71396574-71396593 | Msa0519360:CDS | 45.0% | |
!! | CGTGCATTTCTTTTAAGGGG+TGG | + | chr3_4:71396726-71396745 | Msa0519360:intron | 45.0% |
!! | GCATTTCTTTTAAGGGGTGG+GGG | + | chr3_4:71396729-71396748 | Msa0519360:intron | 45.0% |
GTGGGGTACATGAATGAACT+TGG | + | chr3_4:71396751-71396770 | Msa0519360:intron | 45.0% | |
!! | CATGAATGAACTTGGTGTCC+TGG | + | chr3_4:71396759-71396778 | Msa0519360:intron | 45.0% |
! | CTAAGGTGATTTTCAGAGCC+TGG | + | chr3_4:71397107-71397126 | Msa0519360:intron | 45.0% |
AGAGCCTGGAAGTAAAAGCT+TGG | + | chr3_4:71397121-71397140 | Msa0519360:intron | 45.0% | |
! | ACCACCAAGCTTTTACTTCC+AGG | - | chr3_4:71397128-71397147 | None:intergenic | 45.0% |
CACTAGGGTATGCTTATCCA+TGG | - | chr3_4:71397235-71397254 | None:intergenic | 45.0% | |
GAAGAGGTTGTTGCAGTTAC+TGG | + | chr3_4:71397276-71397295 | Msa0519360:CDS | 45.0% | |
GTTGTTGCAGTTACTGGTGA+TGG | + | chr3_4:71397282-71397301 | Msa0519360:CDS | 45.0% | |
AGCAGATATTGGGCTTGCAA+TGG | + | chr3_4:71397332-71397351 | Msa0519360:CDS | 45.0% | |
GCAGATATTGGGCTTGCAAT+GGG | + | chr3_4:71397333-71397352 | Msa0519360:CDS | 45.0% | |
ATCGGTATGAAGACGTACCT+CGG | - | chr3_4:71397370-71397389 | None:intergenic | 45.0% | |
AAAAGTTGAACCGCAGTGAG+GGG | - | chr3_4:71398060-71398079 | None:intergenic | 45.0% | |
CTCATCATTAGGAGGTTCAG+TGG | - | chr3_4:71398127-71398146 | None:intergenic | 45.0% | |
!! | TGAAAAGAGCACCAGTTGGT+AGG | + | chr3_4:71398151-71398170 | Msa0519360:CDS | 45.0% |
CGTGATGTGGAGGAATATCA+CGG | + | chr3_4:71398194-71398213 | Msa0519360:CDS | 45.0% | |
GTGATGTGGAGGAATATCAC+GGG | + | chr3_4:71398195-71398214 | Msa0519360:CDS | 45.0% | |
TGATGTGGAGGAATATCACG+GGG | + | chr3_4:71398196-71398215 | Msa0519360:CDS | 45.0% | |
ATCTGGTTACTCCAGACAAG+AGG | + | chr3_4:71398243-71398262 | Msa0519360:CDS | 45.0% | |
!! | AGCTTTTCATCTTGATGGCC+CGG | + | chr3_4:71398272-71398291 | Msa0519360:CDS | 45.0% |
TGAGATCAGTTCCAGAGACA+TGG | + | chr3_4:71398584-71398603 | Msa0519360:CDS | 45.0% | |
! | TAGAGGAGATGTGTTGGCAT+AGG | - | chr3_4:71398712-71398731 | None:intergenic | 45.0% |
!! | AGCTTTGAAGATGATCCCTG+TGG | + | chr3_4:71398791-71398810 | Msa0519360:CDS | 45.0% |
!! | GCTTTGAAGATGATCCCTGT+GGG | + | chr3_4:71398792-71398811 | Msa0519360:CDS | 45.0% |
!! | GGCAACTTTTAGAAGAGACG+AGG | - | chr3_4:71398901-71398920 | None:intergenic | 45.0% |
!! | CGGAAGAAGCACTTCAGAGA+TGG | + | chr3_4:71393180-71393199 | Msa0519360:CDS | 50.0% |
CTTATCCCACTAAGTGGGGT+CGG | - | chr3_4:71393565-71393584 | None:intergenic | 50.0% | |
TCCGTAGAAACCGGAAGTTC+TGG | + | chr3_4:71393835-71393854 | Msa0519360:intron | 50.0% | |
CTACGTGGTACCAGAACTTC+CGG | - | chr3_4:71393848-71393867 | None:intergenic | 50.0% | |
CAAACTAAGCATGGAAGGGC+AGG | - | chr3_4:71394248-71394267 | None:intergenic | 50.0% | |
CTGCCCTTCCATGCTTAGTT+TGG | + | chr3_4:71394246-71394265 | Msa0519360:intron | 50.0% | |
! | AAGCGAGTACAGAGTACCAG+AGG | + | chr3_4:71394690-71394709 | Msa0519360:CDS | 50.0% |
! | CCTGCAGCTTTAACTTCCTC+TGG | - | chr3_4:71394709-71394728 | None:intergenic | 50.0% |
CCAGAGGAAGTTAAAGCTGC+AGG | + | chr3_4:71394706-71394725 | Msa0519360:CDS | 50.0% | |
GAGGCAGGGACAATTGTTGA+TGG | + | chr3_4:71394748-71394767 | Msa0519360:CDS | 50.0% | |
ATTCACTGAAAGTCCAGCCC+GGG | + | chr3_4:71394906-71394925 | Msa0519360:CDS | 50.0% | |
GAGATCAAGTCCCTGCTGAT+GGG | + | chr3_4:71395244-71395263 | Msa0519360:CDS | 50.0% | |
GACACAAAAAGCCCATCAGC+AGG | - | chr3_4:71395258-71395277 | None:intergenic | 50.0% | |
!!! | GCTGATGGGCTTTTTGTGTC+CGG | + | chr3_4:71395258-71395277 | Msa0519360:CDS | 50.0% |
GCATCTTGCATGATCCATCC+TGG | - | chr3_4:71395380-71395399 | None:intergenic | 50.0% | |
CTGTTGGAATGAGAACCCAG+TGG | + | chr3_4:71395409-71395428 | Msa0519360:CDS | 50.0% | |
GTTGGAATGAGAACCCAGTG+GGG | + | chr3_4:71395411-71395430 | Msa0519360:CDS | 50.0% | |
GCAGGTAAAACTCAATGGCG+TGG | + | chr3_4:71395482-71395501 | Msa0519360:CDS | 50.0% | |
TTTAGCCGCAAGCTGCAAGA+AGG | + | chr3_4:71395573-71395592 | Msa0519360:CDS | 50.0% | |
AGCTGCAAGAAGGTTCCCAA+TGG | + | chr3_4:71395583-71395602 | Msa0519360:CDS | 50.0% | |
CATCACCAGACCATGTCCAT+TGG | - | chr3_4:71395602-71395621 | None:intergenic | 50.0% | |
! | TAAGGCACTCGTCCGTCATT+TGG | + | chr3_4:71395746-71395765 | Msa0519360:CDS | 50.0% |
ACCAACTGAGACTGCCATCT+TGG | + | chr3_4:71396022-71396041 | Msa0519360:CDS | 50.0% | |
TCCAAGATGGCAGTCTCAGT+TGG | - | chr3_4:71396026-71396045 | None:intergenic | 50.0% | |
GTTCTACAGCTTCCTGATGG+TGG | + | chr3_4:71396146-71396165 | Msa0519360:CDS | 50.0% | |
TGTGCTCTGTAACCACCATC+AGG | - | chr3_4:71396161-71396180 | None:intergenic | 50.0% | |
TGTAAGCAAGGCAAAGGGTC+CGG | - | chr3_4:71396319-71396338 | None:intergenic | 50.0% | |
GGTCGGCTGGTATTACAGTT+AGG | + | chr3_4:71396462-71396481 | Msa0519360:CDS | 50.0% | |
ACCGATGGTATGGCGATTGA+AGG | + | chr3_4:71396545-71396564 | Msa0519360:CDS | 50.0% | |
GCCTTCAATCGCCATACCAT+CGG | - | chr3_4:71396549-71396568 | None:intergenic | 50.0% | |
CACTCATTTCACGGAACTCC+GGG | - | chr3_4:71396571-71396590 | None:intergenic | 50.0% | |
GCACGCCAAAACTCAAACTC+TGG | - | chr3_4:71396711-71396730 | None:intergenic | 50.0% | |
!! | TTTCTTTTAAGGGGTGGGGG+TGG | + | chr3_4:71396732-71396751 | Msa0519360:intron | 50.0% |
!! | TTCTTTTAAGGGGTGGGGGT+GGG | + | chr3_4:71396733-71396752 | Msa0519360:intron | 50.0% |
GCCTGGAAGTAAAAGCTTGG+TGG | + | chr3_4:71397124-71397143 | Msa0519360:intron | 50.0% | |
AATGGCTCGATCTTCACCCA+TGG | + | chr3_4:71397215-71397234 | Msa0519360:CDS | 50.0% | |
!! | AGAGCACCAGTTGGTAGGAA+AGG | + | chr3_4:71398156-71398175 | Msa0519360:CDS | 50.0% |
GGAATCTCAGCACCCATGAA+AGG | - | chr3_4:71398467-71398486 | None:intergenic | 50.0% | |
TCAGTTCCAGAGACATGGAG+AGG | + | chr3_4:71398589-71398608 | Msa0519360:CDS | 50.0% | |
! | AGCGTTTTCCTTGGAGTCCT+TGG | + | chr3_4:71398753-71398772 | Msa0519360:CDS | 50.0% |
ACTAAGTGGGGTCGGCTACA+TGG | - | chr3_4:71393557-71393576 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | + | chr3_4:71393556-71393575 | Msa0519360:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | + | chr3_4:71393557-71393576 | Msa0519360:intron | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | + | chr3_4:71393563-71393582 | Msa0519360:intron | 55.0% | |
TTCACTGAAAGTCCAGCCCG+GGG | + | chr3_4:71394907-71394926 | Msa0519360:CDS | 55.0% | |
! | AAAGTCCAGCCCGGGGATTT+TGG | + | chr3_4:71394914-71394933 | Msa0519360:CDS | 55.0% |
! | AAGTCCAGCCCGGGGATTTT+GGG | + | chr3_4:71394915-71394934 | Msa0519360:CDS | 55.0% |
AAAACCCAAAATCCCCGGGC+TGG | - | chr3_4:71394922-71394941 | None:intergenic | 55.0% | |
ATCCCATCCTGTGCACCCTT+AGG | - | chr3_4:71395036-71395055 | None:intergenic | 55.0% | |
! | AAGGGTGCACAGGATGGGAT+TGG | + | chr3_4:71395036-71395055 | Msa0519360:CDS | 55.0% |
ACAGTTCAGGTCACGCGGAA+TGG | + | chr3_4:71395159-71395178 | Msa0519360:CDS | 55.0% | |
GGAGATCAAGTCCCTGCTGA+TGG | + | chr3_4:71395243-71395262 | Msa0519360:CDS | 55.0% | |
GCTTGCGGCTAAATAGCCCT+TGG | - | chr3_4:71395566-71395585 | None:intergenic | 55.0% | |
GGGAACCTTCTTGCAGCTTG+CGG | - | chr3_4:71395581-71395600 | None:intergenic | 55.0% | |
GGTTCCCAATGGACATGGTC+TGG | + | chr3_4:71395594-71395613 | Msa0519360:CDS | 55.0% | |
CAACAACACCGGAGGTGAAG+TGG | + | chr3_4:71395962-71395981 | Msa0519360:CDS | 55.0% | |
AAGGGTCCGGAGAGCTTCAT+TGG | - | chr3_4:71396306-71396325 | None:intergenic | 55.0% | |
CAGACTCTCGAACACCAGGA+CGG | - | chr3_4:71396430-71396449 | None:intergenic | 55.0% | |
GCTACAGACTCTCGAACACC+AGG | - | chr3_4:71396434-71396453 | None:intergenic | 55.0% | |
GTAGCCATTTGTAGGTCGGC+TGG | + | chr3_4:71396449-71396468 | Msa0519360:CDS | 55.0% | |
TGGTATGGCGATTGAAGGCC+CGG | + | chr3_4:71396550-71396569 | Msa0519360:CDS | 55.0% | |
!! | TCTTTTAAGGGGTGGGGGTG+GGG | + | chr3_4:71396734-71396753 | Msa0519360:intron | 55.0% |
! | AATGGGCATTGCTGGAACCG+AGG | + | chr3_4:71397350-71397369 | Msa0519360:CDS | 55.0% |
!! | CAGTGAGGGGAGCATTTCCT+GGG | - | chr3_4:71398047-71398066 | None:intergenic | 55.0% |
AGGAAATGCTCCCCTCACTG+CGG | + | chr3_4:71398047-71398066 | Msa0519360:intron | 55.0% | |
!! | ATGGGTGCTGAGATTCCCTG+TGG | + | chr3_4:71398470-71398489 | Msa0519360:intron | 55.0% |
! | GATTTGGAAGATGGCGGTGC+AGG | - | chr3_4:71398667-71398686 | None:intergenic | 55.0% |
TTGGCATGCCAAGGACTCCA+AGG | - | chr3_4:71398764-71398783 | None:intergenic | 55.0% | |
GGAGTCCTTGGCATGCCAAT+TGG | + | chr3_4:71398765-71398784 | Msa0519360:CDS | 55.0% | |
CTGCACCAATTGGCATGCCA+AGG | - | chr3_4:71398773-71398792 | None:intergenic | 55.0% | |
! | TGGCCTAAGGGTGCACAGGA+TGG | + | chr3_4:71395030-71395049 | Msa0519360:CDS | 60.0% |
! | GGCCTAAGGGTGCACAGGAT+GGG | + | chr3_4:71395031-71395050 | Msa0519360:CDS | 60.0% |
TCTCGAACACCAGGACGGAC+TGG | - | chr3_4:71396425-71396444 | None:intergenic | 60.0% | |
! | GGGCTTGCAATGGGCATTGC+TGG | + | chr3_4:71397342-71397361 | Msa0519360:CDS | 60.0% |
!! | GCAGTGAGGGGAGCATTTCC+TGG | - | chr3_4:71398048-71398067 | None:intergenic | 60.0% |
! | AGGGTGGCCTAAGGGTGCAC+AGG | + | chr3_4:71395026-71395045 | Msa0519360:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 71392850 | 71399188 | 71392850 | ID=Msa0519360;Name=Msa0519360 |
chr3_4 | mRNA | 71392850 | 71399188 | 71392850 | ID=Msa0519360-mRNA-1;Parent=Msa0519360;Name=Msa0519360-mRNA-1;_AED=0.05;_eAED=0.05;_QI=278|1|1|1|1|1|7|364|1019 |
chr3_4 | exon | 71392850 | 71393304 | 71392850 | ID=Msa0519360-mRNA-1:exon:19596;Parent=Msa0519360-mRNA-1 |
chr3_4 | exon | 71394538 | 71394592 | 71394538 | ID=Msa0519360-mRNA-1:exon:19597;Parent=Msa0519360-mRNA-1 |
chr3_4 | exon | 71394677 | 71396625 | 71394677 | ID=Msa0519360-mRNA-1:exon:19598;Parent=Msa0519360-mRNA-1 |
chr3_4 | exon | 71397213 | 71397371 | 71397213 | ID=Msa0519360-mRNA-1:exon:19599;Parent=Msa0519360-mRNA-1 |
chr3_4 | exon | 71397772 | 71397943 | 71397772 | ID=Msa0519360-mRNA-1:exon:19600;Parent=Msa0519360-mRNA-1 |
chr3_4 | exon | 71398049 | 71398347 | 71398049 | ID=Msa0519360-mRNA-1:exon:19601;Parent=Msa0519360-mRNA-1 |
chr3_4 | exon | 71398576 | 71399188 | 71398576 | ID=Msa0519360-mRNA-1:exon:19602;Parent=Msa0519360-mRNA-1 |
chr3_4 | five_prime_UTR | 71392850 | 71393127 | 71392850 | ID=Msa0519360-mRNA-1:five_prime_utr;Parent=Msa0519360-mRNA-1 |
chr3_4 | CDS | 71393128 | 71393304 | 71393128 | ID=Msa0519360-mRNA-1:cds;Parent=Msa0519360-mRNA-1 |
chr3_4 | CDS | 71394538 | 71394592 | 71394538 | ID=Msa0519360-mRNA-1:cds;Parent=Msa0519360-mRNA-1 |
chr3_4 | CDS | 71394677 | 71396625 | 71394677 | ID=Msa0519360-mRNA-1:cds;Parent=Msa0519360-mRNA-1 |
chr3_4 | CDS | 71397213 | 71397371 | 71397213 | ID=Msa0519360-mRNA-1:cds;Parent=Msa0519360-mRNA-1 |
chr3_4 | CDS | 71397772 | 71397943 | 71397772 | ID=Msa0519360-mRNA-1:cds;Parent=Msa0519360-mRNA-1 |
chr3_4 | CDS | 71398049 | 71398347 | 71398049 | ID=Msa0519360-mRNA-1:cds;Parent=Msa0519360-mRNA-1 |
chr3_4 | CDS | 71398576 | 71398824 | 71398576 | ID=Msa0519360-mRNA-1:cds;Parent=Msa0519360-mRNA-1 |
chr3_4 | three_prime_UTR | 71398825 | 71399188 | 71398825 | ID=Msa0519360-mRNA-1:three_prime_utr;Parent=Msa0519360-mRNA-1 |
Gene Sequence |
Protein sequence |