Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0696310 | XP_003608266.1 | 98.507 | 268 | 2 | 1 | 1 | 268 | 1 | 266 | 0.0 | 535 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0696310 | sp|Q8VYN2|VAP42_ARATH | 65.541 | 296 | 73 | 5 | 1 | 268 | 1 | 295 | 2.60e-123 | 356 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0696310 | Q2HTV7 | 98.507 | 268 | 2 | 1 | 1 | 268 | 1 | 266 | 0.0 | 535 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0125690 | Msa0696310 | 0.800817 | 1.206086e-48 | -8.615850e-47 |
| Msa0558570 | Msa0696310 | 0.921241 | 4.603875e-88 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0696310 | MtrunA17_Chr4g0048491 | 98.507 | 268 | 2 | 1 | 1 | 268 | 1 | 266 | 0.0 | 535 |
| Msa0696310 | MtrunA17_Chr2g0323731 | 69.373 | 271 | 80 | 2 | 1 | 268 | 1 | 271 | 3.64e-115 | 331 |
| Msa0696310 | MtrunA17_Chr2g0318581 | 72.273 | 220 | 57 | 3 | 52 | 268 | 25 | 243 | 6.83e-104 | 302 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0696310 | AT4G21450.1 | 65.541 | 296 | 73 | 5 | 1 | 268 | 1 | 295 | 2.65e-124 | 356 |
| Msa0696310 | AT4G21450.3 | 61.270 | 315 | 74 | 6 | 1 | 268 | 1 | 314 | 1.13e-118 | 342 |
| Msa0696310 | AT4G05060.1 | 65.614 | 285 | 75 | 6 | 1 | 263 | 1 | 284 | 2.93e-110 | 320 |
| Msa0696310 | AT5G54110.1 | 64.427 | 253 | 80 | 4 | 16 | 264 | 16 | 262 | 5.29e-101 | 296 |
| Msa0696310 | AT4G21450.2 | 60.000 | 210 | 56 | 4 | 1 | 182 | 1 | 210 | 9.97e-71 | 217 |
| Msa0696310 | AT5G54110.2 | 60.819 | 171 | 57 | 4 | 16 | 182 | 16 | 180 | 2.33e-51 | 166 |
Find 75 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATCTAATGTAGCATTTA+AGG | 0.154803 | 4_4:-66274725 | Msa0696310:intron |
| AAATGCTACATTAGATTTAC+TGG | 0.228582 | 4_4:+66274729 | None:intergenic |
| CAGGTTTCTTCCGTGCTTCA+AGG | 0.310647 | 4_4:+66273639 | None:intergenic |
| TCAAGAGGAGTGTTACTGTT+AGG | 0.327375 | 4_4:+66276774 | None:intergenic |
| GATGCAGGGCCTAAAATTAT+TGG | 0.351535 | 4_4:-66273611 | Msa0696310:CDS |
| TTAGGTTCGGAGTGAGGTTT+GGG | 0.375172 | 4_4:+66276909 | None:intergenic |
| GGAAAGTAAAGTTTGTTAGA+AGG | 0.376948 | 4_4:+66276669 | None:intergenic |
| CTTAGGTTCGGAGTGAGGTT+TGG | 0.383229 | 4_4:+66276908 | None:intergenic |
| CAAGAGGAGTGTTACTGTTA+GGG | 0.393536 | 4_4:+66276775 | None:intergenic |
| TAAAATTATCTAACCAGCTC+GGG | 0.398885 | 4_4:+66274093 | None:intergenic |
| TGTAGATGAGCCAGGAAAAC+AGG | 0.420800 | 4_4:-66274779 | Msa0696310:intron |
| ATTTAAAATCATGAGTTTGA+AGG | 0.426290 | 4_4:-66274139 | Msa0696310:CDS |
| TTGAAGAAATTCCAAACCTT+AGG | 0.429466 | 4_4:+66276891 | None:intergenic |
| TTAGGCCCTGCATCTTCTGC+AGG | 0.429473 | 4_4:+66273620 | None:intergenic |
| CTCACAGGACTTGGACGCTC+TGG | 0.438074 | 4_4:+66273921 | None:intergenic |
| AACAGTAACACTCCTCTTGA+AGG | 0.439501 | 4_4:-66276771 | Msa0696310:CDS |
| GAGAAGAGTTTCAAAATCAC+AGG | 0.445545 | 4_4:-66273349 | Msa0696310:three_prime_UTR |
| AGTTGTTTCATGCGTCCTCC+TGG | 0.445612 | 4_4:-66274363 | Msa0696310:CDS |
| GAAATTCCAAACCTTAGGTT+CGG | 0.448162 | 4_4:+66276896 | None:intergenic |
| AATGACATTTATCTACATAA+AGG | 0.449589 | 4_4:+66273242 | None:intergenic |
| CTCACTCCGAACCTAAGGTT+TGG | 0.454205 | 4_4:-66276902 | Msa0696310:CDS |
| GCTTGAGACGACGTCGTGTT+GGG | 0.464165 | 4_4:+66276697 | None:intergenic |
| ATGAGCCAGGAAAACAGGTT+AGG | 0.467951 | 4_4:-66274774 | Msa0696310:CDS |
| TTCTGTATAGAATGTTGGTC+TGG | 0.475986 | 4_4:-66273397 | Msa0696310:exon |
| AAGATACCTTGCTAAGCAGC+AGG | 0.483964 | 4_4:-66273436 | Msa0696310:CDS |
| AGAAGACGACGTCGTGTTGG+TGG | 0.485495 | 4_4:+66276839 | None:intergenic |
| AAGAAACCTGCAGAAGATGC+AGG | 0.486887 | 4_4:-66273626 | Msa0696310:CDS |
| GGCGAGAGTATCATAGCAAC+CGG | 0.491969 | 4_4:-66274324 | Msa0696310:intron |
| CTATTTGTATGTAGAGTAGT+TGG | 0.498560 | 4_4:-66273106 | Msa0696310:three_prime_UTR |
| AAGGGCTTGTCATTGATGAA+TGG | 0.501127 | 4_4:-66273586 | Msa0696310:CDS |
| TGAAAGACGAAAATGAAGGA+TGG | 0.501504 | 4_4:+66276973 | None:intergenic |
| GTAGATTCTGTATAGAATGT+TGG | 0.505509 | 4_4:-66273402 | Msa0696310:exon |
| CCGTCTTGTGTAGATGAGCC+AGG | 0.506060 | 4_4:-66274787 | Msa0696310:intron |
| AGCTTGAGACGACGTCGTGT+TGG | 0.512822 | 4_4:+66276696 | None:intergenic |
| GTGAGGTTTGGGTTCAGCTA+CGG | 0.514019 | 4_4:+66276920 | None:intergenic |
| TTTGGGTTCAGCTACGGCCA+TGG | 0.528458 | 4_4:+66276926 | None:intergenic |
| ATAAAATTATCTAACCAGCT+CGG | 0.529735 | 4_4:+66274092 | None:intergenic |
| ATCATGAGTTTGAAGGTCAA+AGG | 0.531786 | 4_4:-66274132 | Msa0696310:CDS |
| GAAAGACGAAAATGAAGGAT+GGG | 0.534378 | 4_4:+66276974 | None:intergenic |
| CTGGATAAATTAATATATGT+TGG | 0.534473 | 4_4:-66273378 | Msa0696310:three_prime_UTR |
| AGGGCTTGTCATTGATGAAT+GGG | 0.534501 | 4_4:-66273585 | Msa0696310:intron |
| AATTGATTACGTCCCCGAGC+TGG | 0.536261 | 4_4:-66274106 | Msa0696310:intron |
| GGGCCTAAAATTATTGGTGA+AGG | 0.537596 | 4_4:-66273605 | Msa0696310:CDS |
| CAAACCTCACTCCGAACCTA+AGG | 0.538817 | 4_4:-66276907 | Msa0696310:CDS |
| AACAGGTTAGGAGTGCCATC+AGG | 0.542734 | 4_4:-66274762 | Msa0696310:CDS |
| AACAGAAGACGACGTCGTGT+TGG | 0.544962 | 4_4:+66276836 | None:intergenic |
| GAAGTGTTAGAATTGCGAAA+AGG | 0.547722 | 4_4:+66276864 | None:intergenic |
| CCAGGTGCAAGGATAGCTCC+AGG | 0.557167 | 4_4:+66274345 | None:intergenic |
| AAATTTGCTCAACTGCCACC+TGG | 0.560385 | 4_4:+66273964 | None:intergenic |
| CCTGGAGCTATCCTTGCACC+TGG | 0.563540 | 4_4:-66274345 | Msa0696310:CDS |
| AGGTTTCTTCCGTGCTTCAA+GGG | 0.567437 | 4_4:+66273640 | None:intergenic |
| TGATACTCTCGCCAGGTGCA+AGG | 0.572027 | 4_4:+66274334 | None:intergenic |
| GTTGCTATGATACTCTCGCC+AGG | 0.577145 | 4_4:+66274327 | None:intergenic |
| GGCCTAAAATTATTGGTGAA+GGG | 0.578667 | 4_4:-66273604 | Msa0696310:CDS |
| CATCGCCCTGCTGCTTAGCA+AGG | 0.579673 | 4_4:+66273430 | None:intergenic |
| GTGAAAACTATGTGTGGGTG+TGG | 0.581788 | 4_4:-66273272 | Msa0696310:three_prime_UTR |
| ATTGTAAAACGTGAAAGTCA+AGG | 0.584553 | 4_4:-66277006 | Msa0696310:five_prime_UTR |
| CAAACCTTAGGTTCGGAGTG+AGG | 0.596942 | 4_4:+66276903 | None:intergenic |
| ATGATGAAAGACGAAAATGA+AGG | 0.598944 | 4_4:+66276969 | None:intergenic |
| CTGATGCTGCCCTTGAAGCA+CGG | 0.601872 | 4_4:-66273649 | Msa0696310:CDS |
| TGCTAAGCAGCAGGGCGATG+TGG | 0.604162 | 4_4:-66273427 | Msa0696310:CDS |
| AATGAAAAGCCAGAAAAGAG+TGG | 0.610602 | 4_4:-66274168 | Msa0696310:CDS |
| AGAAACCTGCAGAAGATGCA+GGG | 0.611107 | 4_4:-66273625 | Msa0696310:CDS |
| AAAATGAAGGATGGGAAACG+AGG | 0.611887 | 4_4:+66276982 | None:intergenic |
| CTCAAAACAGAGAGAAACCA+TGG | 0.611939 | 4_4:-66276943 | Msa0696310:exon |
| GTTTGATGAGCAGAAAGACC+AGG | 0.616359 | 4_4:-66273982 | Msa0696310:CDS |
| TGAAAAGTGAAAACTATGTG+TGG | 0.620556 | 4_4:-66273278 | Msa0696310:three_prime_UTR |
| TGTGAAGTTGAACCTTCAAG+AGG | 0.629338 | 4_4:+66276759 | None:intergenic |
| AGATACCTTGCTAAGCAGCA+GGG | 0.656370 | 4_4:-66273435 | Msa0696310:CDS |
| AAAATTATCTAACCAGCTCG+GGG | 0.659211 | 4_4:+66274094 | None:intergenic |
| GAAAAGTGAAAACTATGTGT+GGG | 0.667787 | 4_4:-66273277 | Msa0696310:three_prime_UTR |
| AAATGAAGGATGGGAAACGA+GGG | 0.679147 | 4_4:+66276983 | None:intergenic |
| AGAAGAGTTTCAAAATCACA+GGG | 0.682298 | 4_4:-66273348 | Msa0696310:three_prime_UTR |
| TGATGAGCAGAAAGACCAGG+TGG | 0.693468 | 4_4:-66273979 | Msa0696310:CDS |
| GGTGCAAGGATAGCTCCAGG+AGG | 0.793325 | 4_4:+66274348 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTCAATTTAATTAGA+GGG | - | chr4_4:66273621-66273640 | Msa0696310:CDS | 10.0% |
| !! | GTTTATTTCAATTTAATTAG+AGG | - | chr4_4:66273620-66273639 | Msa0696310:CDS | 15.0% |
| !!! | TATCTATAACTATAAACTTT+TGG | - | chr4_4:66273673-66273692 | Msa0696310:CDS | 15.0% |
| !!! | ATCTATAACTATAAACTTTT+GGG | - | chr4_4:66273674-66273693 | Msa0696310:CDS | 15.0% |
| !!! | AAGATCGTTTTATTATTTTT+TGG | + | chr4_4:66274462-66274481 | None:intergenic | 15.0% |
| !! | ATGTTACATGATAATAAATA+GGG | + | chr4_4:66275478-66275497 | None:intergenic | 15.0% |
| !! | AATGTTACATGATAATAAAT+AGG | + | chr4_4:66275479-66275498 | None:intergenic | 15.0% |
| !!! | TTATTTAGATTTGTTTTCTA+AGG | - | chr4_4:66276116-66276135 | Msa0696310:intron | 15.0% |
| !! | AATTGATTGTATATTACTTA+TGG | - | chr4_4:66276419-66276438 | Msa0696310:intron | 15.0% |
| !! | ATTGATTGTATATTACTTAT+GGG | - | chr4_4:66276420-66276439 | Msa0696310:intron | 15.0% |
| !!! | ATTTTTCTTCATTAAGATTT+TGG | - | chr4_4:66276448-66276467 | Msa0696310:intron | 15.0% |
| !! | AAACCAGATAAAAAAGTTTA+GGG | + | chr4_4:66273862-66273881 | None:intergenic | 20.0% |
| !! | TAAACCAGATAAAAAAGTTT+AGG | + | chr4_4:66273863-66273882 | None:intergenic | 20.0% |
| !! | AAAATTTAGTTAGAGAACAA+TGG | - | chr4_4:66274171-66274190 | Msa0696310:CDS | 20.0% |
| !!! | TCCATATATGATTTTAGTTT+TGG | - | chr4_4:66274194-66274213 | Msa0696310:CDS | 20.0% |
| !!! | CCATATATGATTTTAGTTTT+GGG | - | chr4_4:66274195-66274214 | Msa0696310:CDS | 20.0% |
| !!! | AAACTGTAAATTTTGAAAGT+AGG | - | chr4_4:66275123-66275142 | Msa0696310:intron | 20.0% |
| !! | TAAATCTAATGTAGCATTTA+AGG | - | chr4_4:66275422-66275441 | Msa0696310:intron | 20.0% |
| !! | TGTTACATGATAATAAATAG+GGG | + | chr4_4:66275477-66275496 | None:intergenic | 20.0% |
| !! | ATATAAAGACGTATAAAGTA+GGG | + | chr4_4:66275540-66275559 | None:intergenic | 20.0% |
| !!! | TGTATTTATTATACTAGCTT+TGG | + | chr4_4:66275892-66275911 | None:intergenic | 20.0% |
| !! | AAGCTAGTATAATAAATACA+AGG | - | chr4_4:66275892-66275911 | Msa0696310:intron | 20.0% |
| !!! | ATTTAAAATCATGAGTTTGA+AGG | - | chr4_4:66276008-66276027 | Msa0696310:intron | 20.0% |
| !!! | TTCAGTGTACTTTTTTATTT+TGG | - | chr4_4:66276259-66276278 | Msa0696310:intron | 20.0% |
| !!! | TTTTATTTTGGCAATTTTTG+TGG | - | chr4_4:66276271-66276290 | Msa0696310:intron | 20.0% |
| !!! | AATTATCTGTTACTTTATTG+TGG | - | chr4_4:66276334-66276353 | Msa0696310:intron | 20.0% |
| !! | CTGGATAAATTAATATATGT+TGG | - | chr4_4:66276769-66276788 | Msa0696310:CDS | 20.0% |
| !! | AATGACATTTATCTACATAA+AGG | + | chr4_4:66276908-66276927 | None:intergenic | 20.0% |
| !!! | ATAAATGTCATTATGTTTTC+AGG | - | chr4_4:66276916-66276935 | Msa0696310:CDS | 20.0% |
| !!! | TTTCCCTAAACTTTTTTATC+TGG | - | chr4_4:66273856-66273875 | Msa0696310:intron | 25.0% |
| ! | AATACTTTGTGAAGTAGTAT+TGG | + | chr4_4:66274036-66274055 | None:intergenic | 25.0% |
| !! | GCTTTCAATTTTTCCATTTT+CGG | + | chr4_4:66274060-66274079 | None:intergenic | 25.0% |
| !! | TGATAATGTATGGAAATTGA+GGG | + | chr4_4:66274101-66274120 | None:intergenic | 25.0% |
| !!! | TTGATAATGTATGGAAATTG+AGG | + | chr4_4:66274102-66274121 | None:intergenic | 25.0% |
| ! | TTTCCATACATTATCAATCA+AGG | - | chr4_4:66274105-66274124 | Msa0696310:intron | 25.0% |
| ! | TTCCATACATTATCAATCAA+GGG | - | chr4_4:66274106-66274125 | Msa0696310:intron | 25.0% |
| ! | CCCAAAACTAAAATCATATA+TGG | + | chr4_4:66274198-66274217 | None:intergenic | 25.0% |
| !!! | TATTATTTTTTGGTTACCCA+TGG | + | chr4_4:66274452-66274471 | None:intergenic | 25.0% |
| !! | ATAAAACGATCTTTTCTCTT+TGG | - | chr4_4:66274469-66274488 | Msa0696310:intron | 25.0% |
| !! | TAAAACGATCTTTTCTCTTT+GGG | - | chr4_4:66274470-66274489 | Msa0696310:intron | 25.0% |
| ! | GTCACAGCTAATATAAATTA+GGG | - | chr4_4:66274718-66274737 | Msa0696310:intron | 25.0% |
| ! | ATTACTGTACACACAATTTA+TGG | - | chr4_4:66274824-66274843 | Msa0696310:intron | 25.0% |
| ! | ACTAAGCAGTTAAATTTGAA+TGG | - | chr4_4:66274952-66274971 | Msa0696310:intron | 25.0% |
| !!! | ACTAAGATACCAAGTTTTAT+TGG | - | chr4_4:66275092-66275111 | Msa0696310:intron | 25.0% |
| !! | CTAAAAGTACATACAACATT+AGG | + | chr4_4:66275206-66275225 | None:intergenic | 25.0% |
| !! | CTAATGTTGTATGTACTTTT+AGG | - | chr4_4:66275204-66275223 | Msa0696310:intron | 25.0% |
| !!! | TTTTAGGTCCATAAATACAT+AGG | - | chr4_4:66275220-66275239 | Msa0696310:intron | 25.0% |
| ! | AAATGCTACATTAGATTTAC+TGG | + | chr4_4:66275421-66275440 | None:intergenic | 25.0% |
| ! | GTTACATGATAATAAATAGG+GGG | + | chr4_4:66275476-66275495 | None:intergenic | 25.0% |
| ! | TATAAAGACGTATAAAGTAG+GGG | + | chr4_4:66275539-66275558 | None:intergenic | 25.0% |
| ! | CATATAAAGACGTATAAAGT+AGG | + | chr4_4:66275541-66275560 | None:intergenic | 25.0% |
| ! | TAGTAAAAGTAAGAATAGAC+AGG | + | chr4_4:66275622-66275641 | None:intergenic | 25.0% |
| !! | CCAACACTAATTTAGAATAT+AGG | + | chr4_4:66275701-66275720 | None:intergenic | 25.0% |
| ! | CCTATATTCTAAATTAGTGT+TGG | - | chr4_4:66275698-66275717 | Msa0696310:intron | 25.0% |
| !! | TTTCTCTACATATTCTTTTC+TGG | - | chr4_4:66275860-66275879 | Msa0696310:intron | 25.0% |
| !! | TTCTCTACATATTCTTTTCT+GGG | - | chr4_4:66275861-66275880 | Msa0696310:intron | 25.0% |
| ! | ATAAAATTATCTAACCAGCT+CGG | + | chr4_4:66276058-66276077 | None:intergenic | 25.0% |
| !!! | CTGAAATTTTTTTTACTCAC+AGG | + | chr4_4:66276244-66276263 | None:intergenic | 25.0% |
| !!! | AGATTTTGGAAAAATTGAAG+CGG | - | chr4_4:66276462-66276481 | Msa0696310:intron | 25.0% |
| !! | CTTTCTGAAAAAACATAATC+AGG | + | chr4_4:66276681-66276700 | None:intergenic | 25.0% |
| !!! | TTATGTTTTTTCAGAAAGAG+AGG | - | chr4_4:66276683-66276702 | Msa0696310:CDS | 25.0% |
| !! | CTTTTTCTTGGAATATTTTC+AGG | - | chr4_4:66276823-66276842 | Msa0696310:CDS | 25.0% |
| ATTGTAAAACGTGAAAGTCA+AGG | - | chr4_4:66273141-66273160 | Msa0696310:three_prime_UTR | 30.0% | |
| ATGATGAAAGACGAAAATGA+AGG | + | chr4_4:66273181-66273200 | None:intergenic | 30.0% | |
| TTGAAGAAATTCCAAACCTT+AGG | + | chr4_4:66273259-66273278 | None:intergenic | 30.0% | |
| !! | GGAAAGTAAAGTTTGTTAGA+AGG | + | chr4_4:66273481-66273500 | None:intergenic | 30.0% |
| CAAATGCAGTAACATATGTT+TGG | + | chr4_4:66273800-66273819 | None:intergenic | 30.0% | |
| CAAACATATGTTACTGCATT+TGG | - | chr4_4:66273798-66273817 | Msa0696310:intron | 30.0% | |
| GAATTCTTGCCTGTTTAAAA+AGG | - | chr4_4:66273883-66273902 | Msa0696310:intron | 30.0% | |
| ! | TCAACCATTCCTTTTTAAAC+AGG | + | chr4_4:66273895-66273914 | None:intergenic | 30.0% |
| GTTAATAAGTGAAATGTCAC+AGG | + | chr4_4:66273992-66274011 | None:intergenic | 30.0% | |
| ! | TCACAAAGTATTTCCGAAAA+TGG | - | chr4_4:66274044-66274063 | Msa0696310:intron | 30.0% |
| AGATTAAAATCTAACGCCTA+AGG | + | chr4_4:66274141-66274160 | None:intergenic | 30.0% | |
| !!! | TATGATTTTAGTTTTGGGTC+AGG | - | chr4_4:66274200-66274219 | Msa0696310:CDS | 30.0% |
| CATATAGTACATTCATCACT+TGG | + | chr4_4:66274236-66274255 | None:intergenic | 30.0% | |
| ! | TTCTTTTTACCAACATAGTG+TGG | - | chr4_4:66274273-66274292 | Msa0696310:intron | 30.0% |
| ATCAGAGAAGACAACATTTA+AGG | - | chr4_4:66274515-66274534 | Msa0696310:intron | 30.0% | |
| ! | AACATTTAAGGTCAGTGTTA+AGG | - | chr4_4:66274527-66274546 | Msa0696310:intron | 30.0% |
| TATTCCTCGAATATTGAGTA+AGG | + | chr4_4:66274555-66274574 | None:intergenic | 30.0% | |
| TTACTCAATATTCGAGGAAT+AGG | - | chr4_4:66274554-66274573 | Msa0696310:intron | 30.0% | |
| TACTCAATATTCGAGGAATA+GGG | - | chr4_4:66274555-66274574 | Msa0696310:intron | 30.0% | |
| GGTCACAGCTAATATAAATT+AGG | - | chr4_4:66274717-66274736 | Msa0696310:intron | 30.0% | |
| CTAATATAAATTAGGGAGCA+AGG | - | chr4_4:66274725-66274744 | Msa0696310:intron | 30.0% | |
| TTGAAAGTAGGTCAAACAAA+TGG | - | chr4_4:66275135-66275154 | Msa0696310:intron | 30.0% | |
| TGAAAGTAGGTCAAACAAAT+GGG | - | chr4_4:66275136-66275155 | Msa0696310:intron | 30.0% | |
| TGAATCTGCCTATGTATTTA+TGG | + | chr4_4:66275231-66275250 | None:intergenic | 30.0% | |
| TAAATACATAGGCAGATTCA+TGG | - | chr4_4:66275231-66275250 | Msa0696310:intron | 30.0% | |
| GAACAAAATTGAGTAAGAGA+AGG | + | chr4_4:66275328-66275347 | None:intergenic | 30.0% | |
| TAAATAGGGGGTAAATAAAC+AGG | + | chr4_4:66275464-66275483 | None:intergenic | 30.0% | |
| AAGTAGGGGAATAAATAAAC+AGG | + | chr4_4:66275525-66275544 | None:intergenic | 30.0% | |
| !!! | TCTGGCTTTTCATTATTTTC+TGG | + | chr4_4:66275973-66275992 | None:intergenic | 30.0% |
| TAAAATTATCTAACCAGCTC+GGG | + | chr4_4:66276057-66276076 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTACTCACAGGACT+TGG | + | chr4_4:66276238-66276257 | None:intergenic | 30.0% |
| ! | CAAATTGCAATACTCACTTT+TGG | - | chr4_4:66276623-66276642 | Msa0696310:intron | 30.0% |
| GTAGATTCTGTATAGAATGT+TGG | - | chr4_4:66276745-66276764 | Msa0696310:CDS | 30.0% | |
| AGAAGAGTTTCAAAATCACA+GGG | - | chr4_4:66276799-66276818 | Msa0696310:CDS | 30.0% | |
| !!! | TTGGAATATTTTCAGGTGAA+TGG | - | chr4_4:66276830-66276849 | Msa0696310:CDS | 30.0% |
| TGAAAAGTGAAAACTATGTG+TGG | - | chr4_4:66276869-66276888 | Msa0696310:CDS | 30.0% | |
| GAAAAGTGAAAACTATGTGT+GGG | - | chr4_4:66276870-66276889 | Msa0696310:CDS | 30.0% | |
| !! | CATTATGTTTTCAGGCTTTT+TGG | - | chr4_4:66276924-66276943 | Msa0696310:CDS | 30.0% |
| CTATTTGTATGTAGAGTAGT+TGG | - | chr4_4:66277041-66277060 | Msa0696310:five_prime_UTR | 30.0% | |
| GAAAGACGAAAATGAAGGAT+GGG | + | chr4_4:66273176-66273195 | None:intergenic | 35.0% | |
| TGAAAGACGAAAATGAAGGA+TGG | + | chr4_4:66273177-66273196 | None:intergenic | 35.0% | |
| GAAATTCCAAACCTTAGGTT+CGG | + | chr4_4:66273254-66273273 | None:intergenic | 35.0% | |
| ! | GAAGTGTTAGAATTGCGAAA+AGG | + | chr4_4:66273286-66273305 | None:intergenic | 35.0% |
| ! | GATGATGATGATGATGATGA+AGG | + | chr4_4:66273345-66273364 | None:intergenic | 35.0% |
| AAATGAGCAGCATACATACA+AGG | + | chr4_4:66273502-66273521 | None:intergenic | 35.0% | |
| CTTCTAAACTTGTGCCTTAA+GGG | - | chr4_4:66273821-66273840 | Msa0696310:intron | 35.0% | |
| !! | AATGTTAACTTGTGCCCTTA+AGG | + | chr4_4:66273838-66273857 | None:intergenic | 35.0% |
| CTTGCCTGTTTAAAAAGGAA+TGG | - | chr4_4:66273888-66273907 | Msa0696310:intron | 35.0% | |
| !! | TGGTTGACTTGTTTATGTTC+TGG | - | chr4_4:66273908-66273927 | Msa0696310:intron | 35.0% |
| !! | CGTACGAAAGATAACTTGTT+AGG | - | chr4_4:66274358-66274377 | Msa0696310:CDS | 35.0% |
| !! | GAAAGATAACTTGTTAGGAG+AGG | - | chr4_4:66274363-66274382 | Msa0696310:CDS | 35.0% |
| ATGTTGTCTTCTCTGATTGA+CGG | + | chr4_4:66274512-66274531 | None:intergenic | 35.0% | |
| ATTTATATTAGCTGTGACCG+AGG | + | chr4_4:66274716-66274735 | None:intergenic | 35.0% | |
| AGTAACTTCCATTGCTAACA+AGG | + | chr4_4:66274994-66275013 | None:intergenic | 35.0% | |
| TGTTAGCAATGGAAGTTACT+AGG | - | chr4_4:66274994-66275013 | Msa0696310:intron | 35.0% | |
| GTTAGCAATGGAAGTTACTA+GGG | - | chr4_4:66274995-66275014 | Msa0696310:intron | 35.0% | |
| GCATAAAATGACCAATCATG+AGG | + | chr4_4:66275303-66275322 | None:intergenic | 35.0% | |
| !! | ACTGGTGTTTTTAATCCTGA+TGG | + | chr4_4:66275403-66275422 | None:intergenic | 35.0% |
| !! | ATATGCAGTTTTTGTTGTCG+CGG | - | chr4_4:66275572-66275591 | Msa0696310:intron | 35.0% |
| ! | TTACTATGTCACTGTTTTGC+AGG | - | chr4_4:66275636-66275655 | Msa0696310:intron | 35.0% |
| AGAAATCGAATATTGCCTAC+CGG | + | chr4_4:66275845-66275864 | None:intergenic | 35.0% | |
| AATGAAAAGCCAGAAAAGAG+TGG | - | chr4_4:66275979-66275998 | Msa0696310:intron | 35.0% | |
| ! | AATTTGAGTCCACTCTTTTC+TGG | + | chr4_4:66275991-66276010 | None:intergenic | 35.0% |
| ATCATGAGTTTGAAGGTCAA+AGG | - | chr4_4:66276015-66276034 | Msa0696310:intron | 35.0% | |
| AAAATTATCTAACCAGCTCG+GGG | + | chr4_4:66276056-66276075 | None:intergenic | 35.0% | |
| !!! | GGCAATTAATTTTTTCTGCC+TGG | - | chr4_4:66276137-66276156 | Msa0696310:intron | 35.0% |
| GGCCTAAAATTATTGGTGAA+GGG | - | chr4_4:66276543-66276562 | Msa0696310:intron | 35.0% | |
| ! | AGCCCTTCACCAATAATTTT+AGG | + | chr4_4:66276548-66276567 | None:intergenic | 35.0% |
| !!! | TGTTTTTTCAGAAAGAGAGG+AGG | - | chr4_4:66276686-66276705 | Msa0696310:CDS | 35.0% |
| !!! | GTTTTTTCAGAAAGAGAGGA+GGG | - | chr4_4:66276687-66276706 | Msa0696310:CDS | 35.0% |
| TTCTGTATAGAATGTTGGTC+TGG | - | chr4_4:66276750-66276769 | Msa0696310:CDS | 35.0% | |
| GAGAAGAGTTTCAAAATCAC+AGG | - | chr4_4:66276798-66276817 | Msa0696310:CDS | 35.0% | |
| ! | AAATCACAGGGTCTTTTTCT+TGG | - | chr4_4:66276811-66276830 | Msa0696310:CDS | 35.0% |
| !!! | TTTTCAGGCTTTTTGGTTTG+TGG | - | chr4_4:66276931-66276950 | Msa0696310:exon | 35.0% |
| ! | GATGTCAATCTGTTTTGCTA+TGG | - | chr4_4:66277016-66277035 | Msa0696310:five_prime_UTR | 35.0% |
| AAATGAAGGATGGGAAACGA+GGG | + | chr4_4:66273167-66273186 | None:intergenic | 40.0% | |
| AAAATGAAGGATGGGAAACG+AGG | + | chr4_4:66273168-66273187 | None:intergenic | 40.0% | |
| CTCAAAACAGAGAGAAACCA+TGG | - | chr4_4:66273204-66273223 | Msa0696310:three_prime_UTR | 40.0% | |
| !! | CAAGAGGAGTGTTACTGTTA+GGG | + | chr4_4:66273375-66273394 | None:intergenic | 40.0% |
| !! | TCAAGAGGAGTGTTACTGTT+AGG | + | chr4_4:66273376-66273395 | None:intergenic | 40.0% |
| AACAGTAACACTCCTCTTGA+AGG | - | chr4_4:66273376-66273395 | Msa0696310:three_prime_UTR | 40.0% | |
| TGTGAAGTTGAACCTTCAAG+AGG | + | chr4_4:66273391-66273410 | None:intergenic | 40.0% | |
| !! | TGGGTCATGTTAACTTGTGT+CGG | - | chr4_4:66273693-66273712 | Msa0696310:intron | 40.0% |
| GCTTCTAAACTTGTGCCTTA+AGG | - | chr4_4:66273820-66273839 | Msa0696310:intron | 40.0% | |
| AGCTCAGTTCGTTAGATCAT+TGG | - | chr4_4:66273960-66273979 | Msa0696310:CDS | 40.0% | |
| !! | GGCCCTTGATTGATAATGTA+TGG | + | chr4_4:66274111-66274130 | None:intergenic | 40.0% |
| TCTAACGCCTAAGGACAAAA+AGG | + | chr4_4:66274132-66274151 | None:intergenic | 40.0% | |
| TGCTTAAGACACTCGGTTAT+CGG | + | chr4_4:66274308-66274327 | None:intergenic | 40.0% | |
| GACTACATGCTTAAGACACT+CGG | + | chr4_4:66274315-66274334 | None:intergenic | 40.0% | |
| GGAACCTTACTCAATATTCG+AGG | - | chr4_4:66274548-66274567 | Msa0696310:intron | 40.0% | |
| GACTAAAAAAGGGAAGGACT+TGG | + | chr4_4:66274600-66274619 | None:intergenic | 40.0% | |
| TCACGTGACTAAAAAAGGGA+AGG | + | chr4_4:66274606-66274625 | None:intergenic | 40.0% | |
| GCAGTCACGTGACTAAAAAA+GGG | + | chr4_4:66274610-66274629 | None:intergenic | 40.0% | |
| AGCAGTCACGTGACTAAAAA+AGG | + | chr4_4:66274611-66274630 | None:intergenic | 40.0% | |
| GTGAACGTGATGATCTTTAG+AGG | + | chr4_4:66274753-66274772 | None:intergenic | 40.0% | |
| CCACAACATATGCACACAAT+AGG | + | chr4_4:66274874-66274893 | None:intergenic | 40.0% | |
| CCTATTGTGTGCATATGTTG+TGG | - | chr4_4:66274871-66274890 | Msa0696310:intron | 40.0% | |
| ATTGTGTGCATATGTTGTGG+AGG | - | chr4_4:66274874-66274893 | Msa0696310:intron | 40.0% | |
| CAATACGCTAGAGACTAGAA+AGG | - | chr4_4:66274917-66274936 | Msa0696310:intron | 40.0% | |
| ATGCCTTACCTTGTTAGCAA+TGG | - | chr4_4:66274983-66275002 | Msa0696310:intron | 40.0% | |
| CTTCCATTGCTAACAAGGTA+AGG | + | chr4_4:66274989-66275008 | None:intergenic | 40.0% | |
| ! | GGACGCATGAAACAACTTTT+TGG | + | chr4_4:66275781-66275800 | None:intergenic | 40.0% |
| TGCTCTACAAACTTGAACAC+TGG | + | chr4_4:66275949-66275968 | None:intergenic | 40.0% | |
| GTGGTCGAGACATTCAATAT+CGG | - | chr4_4:66276353-66276372 | Msa0696310:intron | 40.0% | |
| GATGCAGGGCCTAAAATTAT+TGG | - | chr4_4:66276536-66276555 | Msa0696310:intron | 40.0% | |
| GGGCCTAAAATTATTGGTGA+AGG | - | chr4_4:66276542-66276561 | Msa0696310:intron | 40.0% | |
| AAGGGCTTGTCATTGATGAA+TGG | - | chr4_4:66276561-66276580 | Msa0696310:intron | 40.0% | |
| AGGGCTTGTCATTGATGAAT+GGG | - | chr4_4:66276562-66276581 | Msa0696310:intron | 40.0% | |
| TTAGGTTCGGAGTGAGGTTT+GGG | + | chr4_4:66273241-66273260 | None:intergenic | 45.0% | |
| !! | GGGTCATGTTAACTTGTGTC+GGG | - | chr4_4:66273694-66273713 | Msa0696310:intron | 45.0% |
| ! | TCAAGGGCCTTTTTGTCCTT+AGG | - | chr4_4:66274122-66274141 | Msa0696310:CDS | 45.0% |
| CCAATTGTGCCACACTATGT+TGG | + | chr4_4:66274285-66274304 | None:intergenic | 45.0% | |
| CCAACATAGTGTGGCACAAT+TGG | - | chr4_4:66274282-66274301 | Msa0696310:intron | 45.0% | |
| GTAGTCATGTGTTCGATCCA+TGG | - | chr4_4:66274329-66274348 | Msa0696310:CDS | 45.0% | |
| AGGTACGGAGATCCACTTAA+GGG | + | chr4_4:66274394-66274413 | None:intergenic | 45.0% | |
| GAGACTAATCCTTCGAGGTA+CGG | + | chr4_4:66274409-66274428 | None:intergenic | 45.0% | |
| !! | GTACCTCGAAGGATTAGTCT+CGG | - | chr4_4:66274408-66274427 | Msa0696310:intron | 45.0% |
| !! | TACCTCGAAGGATTAGTCTC+GGG | - | chr4_4:66274409-66274428 | Msa0696310:intron | 45.0% |
| !!! | AAGGATTAGTCTCGGGCTTT+TGG | - | chr4_4:66274416-66274435 | Msa0696310:intron | 45.0% |
| ACTTGGTCGCATCATGATGT+GGG | + | chr4_4:66274583-66274602 | None:intergenic | 45.0% | |
| TATATTAGCTGTGACCGAGG+AGG | + | chr4_4:66274713-66274732 | None:intergenic | 45.0% | |
| CATATGTTGTGGAGGTTGAG+AGG | - | chr4_4:66274882-66274901 | Msa0696310:intron | 45.0% | |
| !!! | ACCAAGTTTTATTGGCTGCG+CGG | - | chr4_4:66275100-66275119 | Msa0696310:intron | 45.0% |
| CGAGTACTTCTCCTCATGAT+TGG | - | chr4_4:66275289-66275308 | Msa0696310:intron | 45.0% | |
| TGTAGATGAGCCAGGAAAAC+AGG | - | chr4_4:66275368-66275387 | Msa0696310:intron | 45.0% | |
| ATGAGCCAGGAAAACAGGTT+AGG | - | chr4_4:66275373-66275392 | Msa0696310:intron | 45.0% | |
| ! | AGAGTATCATAGCAACCGGT+AGG | - | chr4_4:66275827-66275846 | Msa0696310:intron | 45.0% |
| CTGCTCATCAAACTGTTTCC+AGG | + | chr4_4:66276158-66276177 | None:intergenic | 45.0% | |
| GTTTGATGAGCAGAAAGACC+AGG | - | chr4_4:66276165-66276184 | Msa0696310:intron | 45.0% | |
| ! | AAATTTGCTCAACTGCCACC+TGG | + | chr4_4:66276186-66276205 | None:intergenic | 45.0% |
| GGAAAAATTGAAGCGGCAGT+TGG | - | chr4_4:66276469-66276488 | Msa0696310:intron | 45.0% | |
| AGGTTTCTTCCGTGCTTCAA+GGG | + | chr4_4:66276510-66276529 | None:intergenic | 45.0% | |
| AAGAAACCTGCAGAAGATGC+AGG | - | chr4_4:66276521-66276540 | Msa0696310:intron | 45.0% | |
| AGAAACCTGCAGAAGATGCA+GGG | - | chr4_4:66276522-66276541 | Msa0696310:intron | 45.0% | |
| AAGATACCTTGCTAAGCAGC+AGG | - | chr4_4:66276711-66276730 | Msa0696310:CDS | 45.0% | |
| AGATACCTTGCTAAGCAGCA+GGG | - | chr4_4:66276712-66276731 | Msa0696310:CDS | 45.0% | |
| GTGAAAACTATGTGTGGGTG+TGG | - | chr4_4:66276875-66276894 | Msa0696310:CDS | 45.0% | |
| ! | GTGAGGTTTGGGTTCAGCTA+CGG | + | chr4_4:66273230-66273249 | None:intergenic | 50.0% |
| CTTAGGTTCGGAGTGAGGTT+TGG | + | chr4_4:66273242-66273261 | None:intergenic | 50.0% | |
| CAAACCTCACTCCGAACCTA+AGG | - | chr4_4:66273240-66273259 | Msa0696310:three_prime_UTR | 50.0% | |
| CAAACCTTAGGTTCGGAGTG+AGG | + | chr4_4:66273247-66273266 | None:intergenic | 50.0% | |
| CTCACTCCGAACCTAAGGTT+TGG | - | chr4_4:66273245-66273264 | Msa0696310:three_prime_UTR | 50.0% | |
| AACAGAAGACGACGTCGTGT+TGG | + | chr4_4:66273314-66273333 | None:intergenic | 50.0% | |
| GGTACGGAGATCCACTTAAG+GGG | + | chr4_4:66274393-66274412 | None:intergenic | 50.0% | |
| GAGGTACGGAGATCCACTTA+AGG | + | chr4_4:66274395-66274414 | None:intergenic | 50.0% | |
| !! | ATTAGTCTCGGGCTTTTGGC+CGG | - | chr4_4:66274420-66274439 | Msa0696310:intron | 50.0% |
| ! | TTTTGGCCGGAGGATACCAT+GGG | - | chr4_4:66274433-66274452 | Msa0696310:intron | 50.0% |
| TGGTTACCCATGGTATCCTC+CGG | + | chr4_4:66274442-66274461 | None:intergenic | 50.0% | |
| ! | GACTTGGTCGCATCATGATG+TGG | + | chr4_4:66274584-66274603 | None:intergenic | 50.0% |
| ! | AGTCACGTGACTGCTGATTG+AGG | - | chr4_4:66274616-66274635 | Msa0696310:intron | 50.0% |
| ! | GTCACGTGACTGCTGATTGA+GGG | - | chr4_4:66274617-66274636 | Msa0696310:intron | 50.0% |
| ! | TCACGTGACTGCTGATTGAG+GGG | - | chr4_4:66274618-66274637 | Msa0696310:intron | 50.0% |
| AAGTCATTCCGCTTCCTCCT+CGG | - | chr4_4:66274696-66274715 | Msa0696310:intron | 50.0% | |
| ACCCTTGCTAAGCACATCGT+TGG | - | chr4_4:66274791-66274810 | Msa0696310:intron | 50.0% | |
| GCCAACGATGTGCTTAGCAA+GGG | + | chr4_4:66274795-66274814 | None:intergenic | 50.0% | |
| TGCCAACGATGTGCTTAGCA+AGG | + | chr4_4:66274796-66274815 | None:intergenic | 50.0% | |
| TGCTAAGCACATCGTTGGCA+TGG | - | chr4_4:66274796-66274815 | Msa0696310:intron | 50.0% | |
| TCCGCGCAGCCAATAAAACT+TGG | + | chr4_4:66275104-66275123 | None:intergenic | 50.0% | |
| CACAAGACGGAGAGGAAAGA+AGG | + | chr4_4:66275350-66275369 | None:intergenic | 50.0% | |
| CTCATCTACACAAGACGGAG+AGG | + | chr4_4:66275358-66275377 | None:intergenic | 50.0% | |
| CCTGGCTCATCTACACAAGA+CGG | + | chr4_4:66275363-66275382 | None:intergenic | 50.0% | |
| ! | GCACTCCTAACCTGTTTTCC+TGG | + | chr4_4:66275381-66275400 | None:intergenic | 50.0% |
| !! | AACAGGTTAGGAGTGCCATC+AGG | - | chr4_4:66275385-66275404 | Msa0696310:intron | 50.0% |
| ! | AGTTGTTTCATGCGTCCTCC+TGG | - | chr4_4:66275784-66275803 | Msa0696310:intron | 50.0% |
| GTTGCTATGATACTCTCGCC+AGG | + | chr4_4:66275823-66275842 | None:intergenic | 50.0% | |
| !! | GGCGAGAGTATCATAGCAAC+CGG | - | chr4_4:66275823-66275842 | Msa0696310:intron | 50.0% |
| AATTGATTACGTCCCCGAGC+TGG | - | chr4_4:66276041-66276060 | Msa0696310:intron | 50.0% | |
| TGATGAGCAGAAAGACCAGG+TGG | - | chr4_4:66276168-66276187 | Msa0696310:intron | 50.0% | |
| CAGGTTTCTTCCGTGCTTCA+AGG | + | chr4_4:66276511-66276530 | None:intergenic | 50.0% | |
| ! | TTTGGGTTCAGCTACGGCCA+TGG | + | chr4_4:66273224-66273243 | None:intergenic | 55.0% |
| AGAAGACGACGTCGTGTTGG+TGG | + | chr4_4:66273311-66273330 | None:intergenic | 55.0% | |
| GCTTGAGACGACGTCGTGTT+GGG | + | chr4_4:66273453-66273472 | None:intergenic | 55.0% | |
| AGCTTGAGACGACGTCGTGT+TGG | + | chr4_4:66273454-66273473 | None:intergenic | 55.0% | |
| CGAACTGAGCTAAGCTCACG+TGG | + | chr4_4:66273951-66273970 | None:intergenic | 55.0% | |
| TCTTTCGTACGCAGCAGCCA+TGG | + | chr4_4:66274349-66274368 | None:intergenic | 55.0% | |
| GGAGAGGTCATCCCCTTAAG+TGG | - | chr4_4:66274379-66274398 | Msa0696310:CDS | 55.0% | |
| AGTGGATCTCCGTACCTCGA+AGG | - | chr4_4:66274397-66274416 | Msa0696310:intron | 55.0% | |
| AGCCCGAGACTAATCCTTCG+AGG | + | chr4_4:66274414-66274433 | None:intergenic | 55.0% | |
| ! | CTTTTGGCCGGAGGATACCA+TGG | - | chr4_4:66274432-66274451 | Msa0696310:intron | 55.0% |
| ! | ACTGCTGATTGAGGGGAGGT+TGG | - | chr4_4:66274625-66274644 | Msa0696310:intron | 55.0% |
| GAGCTGGCAATGCACGTTGA+GGG | - | chr4_4:66274664-66274683 | Msa0696310:intron | 55.0% | |
| TGGCAATGCACGTTGAGGGA+CGG | - | chr4_4:66274668-66274687 | Msa0696310:intron | 55.0% | |
| CCGTCTTGTGTAGATGAGCC+AGG | - | chr4_4:66275360-66275379 | Msa0696310:intron | 55.0% | |
| TGATACTCTCGCCAGGTGCA+AGG | + | chr4_4:66275816-66275835 | None:intergenic | 55.0% | |
| CTGATGCTGCCCTTGAAGCA+CGG | - | chr4_4:66276498-66276517 | Msa0696310:intron | 55.0% | |
| TTAGGCCCTGCATCTTCTGC+AGG | + | chr4_4:66276530-66276549 | None:intergenic | 55.0% | |
| ! | CGTGACTGCTGATTGAGGGG+AGG | - | chr4_4:66274621-66274640 | Msa0696310:intron | 60.0% |
| AGGGGAGGTTGGCGAGAAGA+AGG | - | chr4_4:66274636-66274655 | Msa0696310:intron | 60.0% | |
| GGGGAGGTTGGCGAGAAGAA+GGG | - | chr4_4:66274637-66274656 | Msa0696310:intron | 60.0% | |
| GGGAGGTTGGCGAGAAGAAG+GGG | - | chr4_4:66274638-66274657 | Msa0696310:intron | 60.0% | |
| GGAGGTTGGCGAGAAGAAGG+GGG | - | chr4_4:66274639-66274658 | Msa0696310:intron | 60.0% | |
| GAGGTTGGCGAGAAGAAGGG+GGG | - | chr4_4:66274640-66274659 | Msa0696310:intron | 60.0% | |
| AGGTTGGCGAGAAGAAGGGG+GGG | - | chr4_4:66274641-66274660 | Msa0696310:intron | 60.0% | |
| GGAGCTGGCAATGCACGTTG+AGG | - | chr4_4:66274663-66274682 | Msa0696310:intron | 60.0% | |
| AGCTGTGACCGAGGAGGAAG+CGG | + | chr4_4:66274707-66274726 | None:intergenic | 60.0% | |
| GGTGCAAGGATAGCTCCAGG+AGG | + | chr4_4:66275802-66275821 | None:intergenic | 60.0% | |
| CCAGGTGCAAGGATAGCTCC+AGG | + | chr4_4:66275805-66275824 | None:intergenic | 60.0% | |
| CCTGGAGCTATCCTTGCACC+TGG | - | chr4_4:66275802-66275821 | Msa0696310:intron | 60.0% | |
| CTCACAGGACTTGGACGCTC+TGG | + | chr4_4:66276229-66276248 | None:intergenic | 60.0% | |
| ! | CATCGCCCTGCTGCTTAGCA+AGG | + | chr4_4:66276720-66276739 | None:intergenic | 60.0% |
| TGCTAAGCAGCAGGGCGATG+TGG | - | chr4_4:66276720-66276739 | Msa0696310:CDS | 60.0% | |
| ! | AGTCTCGGGCTTTTGGCCGG+AGG | - | chr4_4:66274423-66274442 | Msa0696310:intron | 65.0% |
| GGTTGGCGAGAAGAAGGGGG+GGG | - | chr4_4:66274642-66274661 | Msa0696310:intron | 65.0% | |
| CGAGAAGAAGGGGGGGGAGC+TGG | - | chr4_4:66274648-66274667 | Msa0696310:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 66273101 | 66277068 | 66273101 | ID=Msa0696310;Name=Msa0696310 |
| chr4_4 | mRNA | 66273101 | 66277068 | 66273101 | ID=Msa0696310-mRNA-1;Parent=Msa0696310;Name=Msa0696310-mRNA-1;_AED=0.14;_eAED=0.14;_QI=122|1|1|1|1|1|7|309|268 |
| chr4_4 | exon | 66273101 | 66273472 | 66273101 | ID=Msa0696310-mRNA-1:exon:19222;Parent=Msa0696310-mRNA-1 |
| chr4_4 | exon | 66273586 | 66273705 | 66273586 | ID=Msa0696310-mRNA-1:exon:19221;Parent=Msa0696310-mRNA-1 |
| chr4_4 | exon | 66273926 | 66274003 | 66273926 | ID=Msa0696310-mRNA-1:exon:19220;Parent=Msa0696310-mRNA-1 |
| chr4_4 | exon | 66274107 | 66274219 | 66274107 | ID=Msa0696310-mRNA-1:exon:19219;Parent=Msa0696310-mRNA-1 |
| chr4_4 | exon | 66274325 | 66274406 | 66274325 | ID=Msa0696310-mRNA-1:exon:19218;Parent=Msa0696310-mRNA-1 |
| chr4_4 | exon | 66274726 | 66274796 | 66274726 | ID=Msa0696310-mRNA-1:exon:19217;Parent=Msa0696310-mRNA-1 |
| chr4_4 | exon | 66276667 | 66277068 | 66276667 | ID=Msa0696310-mRNA-1:exon:19216;Parent=Msa0696310-mRNA-1 |
| chr4_4 | five_prime_UTR | 66276947 | 66277068 | 66276947 | ID=Msa0696310-mRNA-1:five_prime_utr;Parent=Msa0696310-mRNA-1 |
| chr4_4 | CDS | 66276667 | 66276946 | 66276667 | ID=Msa0696310-mRNA-1:cds;Parent=Msa0696310-mRNA-1 |
| chr4_4 | CDS | 66274726 | 66274796 | 66274726 | ID=Msa0696310-mRNA-1:cds;Parent=Msa0696310-mRNA-1 |
| chr4_4 | CDS | 66274325 | 66274406 | 66274325 | ID=Msa0696310-mRNA-1:cds;Parent=Msa0696310-mRNA-1 |
| chr4_4 | CDS | 66274107 | 66274219 | 66274107 | ID=Msa0696310-mRNA-1:cds;Parent=Msa0696310-mRNA-1 |
| chr4_4 | CDS | 66273926 | 66274003 | 66273926 | ID=Msa0696310-mRNA-1:cds;Parent=Msa0696310-mRNA-1 |
| chr4_4 | CDS | 66273586 | 66273705 | 66273586 | ID=Msa0696310-mRNA-1:cds;Parent=Msa0696310-mRNA-1 |
| chr4_4 | CDS | 66273410 | 66273472 | 66273410 | ID=Msa0696310-mRNA-1:cds;Parent=Msa0696310-mRNA-1 |
| chr4_4 | three_prime_UTR | 66273101 | 66273409 | 66273101 | ID=Msa0696310-mRNA-1:three_prime_utr;Parent=Msa0696310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
