Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0697870 | XP_013457218.1 | 96.189 | 761 | 6 | 2 | 1 | 740 | 1 | 759 | 0.0 | 1501 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0697870 | sp|Q84N64|ARC5_ARATH | 76.861 | 739 | 150 | 1 | 17 | 734 | 23 | 761 | 0.0 | 1162 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0697870 | A0A072UN67 | 96.189 | 761 | 6 | 2 | 1 | 740 | 1 | 759 | 0.0 | 1501 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0037110 | Msa0697870 | 0.809362 | 1.964277e-50 | -8.615850e-47 |
Msa0078110 | Msa0697870 | 0.810773 | 9.757158e-51 | -8.615850e-47 |
Msa0099300 | Msa0697870 | 0.813207 | 2.876174e-51 | -8.615850e-47 |
Msa0639260 | Msa0697870 | 0.874883 | 4.766835e-68 | -8.615850e-47 |
Msa0651490 | Msa0697870 | 0.811544 | 6.640419e-51 | -8.615850e-47 |
Msa0697870 | Msa0982220 | 0.808758 | 2.646441e-50 | -8.615850e-47 |
Msa0697870 | Msa1122920 | 0.818285 | 2.123383e-52 | -8.615850e-47 |
Msa0697870 | Msa1122930 | 0.830509 | 2.820852e-55 | -8.615850e-47 |
Msa0560650 | Msa0697870 | 0.882285 | 1.184351e-70 | -8.615850e-47 |
Msa0578770 | Msa0697870 | 0.846967 | 1.556834e-59 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0697870 | MtrunA17_Chr4g0050661 | 96.189 | 761 | 6 | 2 | 1 | 740 | 1 | 759 | 0.0 | 1501 |
Msa0697870 | MtrunA17_Chr8g0360401 | 31.626 | 449 | 262 | 10 | 23 | 444 | 27 | 457 | 8.66e-55 | 202 |
Msa0697870 | MtrunA17_Chr8g0391891 | 28.649 | 185 | 106 | 6 | 43 | 207 | 36 | 214 | 3.92e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0697870 | AT3G19720.1 | 76.861 | 739 | 150 | 1 | 17 | 734 | 23 | 761 | 0.0 | 1162 |
Msa0697870 | AT3G19720.2 | 75.237 | 739 | 126 | 2 | 17 | 734 | 23 | 725 | 0.0 | 1126 |
Msa0697870 | AT3G19720.3 | 71.613 | 775 | 127 | 4 | 17 | 734 | 23 | 761 | 0.0 | 1100 |
Msa0697870 | AT1G53140.1 | 29.204 | 565 | 345 | 15 | 23 | 551 | 43 | 588 | 1.29e-56 | 207 |
Find 208 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTCTGAAAGGATTGTTTA+TGG | 0.162341 | 4_4:+67895180 | Msa0697870:CDS |
CAGCTGTCATTGCTGCTTAA+AGG | 0.162593 | 4_4:+67892777 | Msa0697870:intron |
CTTGGTTTCTACAGAATTAA+AGG | 0.177555 | 4_4:+67895242 | Msa0697870:CDS |
CAAGCTTTGTTTCAGCTGTC+TGG | 0.191720 | 4_4:-67895113 | None:intergenic |
CGCCTTAGTTGAGGCTCTTA+TGG | 0.197470 | 4_4:+67890378 | Msa0697870:CDS |
TGCATCCTTGGAGGAGAAAT+TGG | 0.198064 | 4_4:+67892005 | Msa0697870:CDS |
AATGCAGGGATGCGTCTTTA+TGG | 0.207557 | 4_4:+67893325 | Msa0697870:CDS |
ACAATTTCTTCCCGGGTAAT+TGG | 0.225123 | 4_4:-67893412 | None:intergenic |
TTCTTTACTTCGGTGCCTTC+TGG | 0.270195 | 4_4:+67891202 | Msa0697870:CDS |
AGTAATGGGCCGGCGGGTTT+TGG | 0.273814 | 4_4:-67890431 | None:intergenic |
ACACTTGATGGATGCATTCT+TGG | 0.281907 | 4_4:+67891169 | Msa0697870:CDS |
GCCTTAGTTGAGGCTCTTAT+GGG | 0.288458 | 4_4:+67890379 | Msa0697870:CDS |
AGGTAAAGAGGAAGATTTAT+AGG | 0.291958 | 4_4:-67896583 | None:intergenic |
CAGAGGGAAAGCACTAAATT+AGG | 0.296809 | 4_4:-67896515 | None:intergenic |
ATAAAAGAGGGACCTGGATT+TGG | 0.311312 | 4_4:-67890546 | None:intergenic |
ATTACTCTTCATATGAAATA+TGG | 0.321859 | 4_4:+67890448 | Msa0697870:CDS |
TTACCAGATGAGCGAATAAA+TGG | 0.323825 | 4_4:+67892988 | Msa0697870:CDS |
CGCGCCGGCCGTGCTGGTTG+TGG | 0.324903 | 4_4:+67890333 | Msa0697870:CDS |
TAAGTTGCCTGCACGCCTTC+GGG | 0.332712 | 4_4:+67896129 | Msa0697870:CDS |
TAGTCCTGGTGTGTCTATTA+TGG | 0.333208 | 4_4:-67890873 | None:intergenic |
CTCATGGTCTCTACACAATA+AGG | 0.336061 | 4_4:+67894730 | Msa0697870:CDS |
CATCTTCAAAAGCAGATTCT+AGG | 0.339798 | 4_4:-67896156 | None:intergenic |
GGAAACTTACCAAACTTATC+AGG | 0.347296 | 4_4:-67892816 | None:intergenic |
AGCTGTCATTGCTGCTTAAA+GGG | 0.352524 | 4_4:+67892778 | Msa0697870:intron |
CGCCAGTTCTTAGATTCATT+TGG | 0.359410 | 4_4:+67894946 | Msa0697870:CDS |
CCACCTGCGTCTACACTTGA+TGG | 0.365304 | 4_4:+67891157 | Msa0697870:CDS |
CCTTCTGGAAGAGTTGGTTC+TGG | 0.366317 | 4_4:+67891217 | Msa0697870:CDS |
ATCACAGTCCTTGACAATTC+AGG | 0.369623 | 4_4:-67891064 | None:intergenic |
CGCCCGTGCCTGTGCCTGTA+TGG | 0.370611 | 4_4:-67890927 | None:intergenic |
TAAAAGAGGGACCTGGATTT+GGG | 0.371553 | 4_4:-67890545 | None:intergenic |
TGAAAGGATTGTTTATGGTT+TGG | 0.374121 | 4_4:+67895185 | Msa0697870:CDS |
GACCAATCTGCAACTTTCAC+TGG | 0.376245 | 4_4:+67896201 | Msa0697870:CDS |
TTTCGACGCGCCGGCCGTGC+TGG | 0.376913 | 4_4:+67890327 | Msa0697870:CDS |
GATAGAAGATGTTGCATCCT+TGG | 0.381459 | 4_4:+67891993 | Msa0697870:CDS |
TTGGTACAACAAATATTTCA+TGG | 0.384673 | 4_4:+67895204 | Msa0697870:CDS |
AACCTGTTTGAAATCATCAT+TGG | 0.384824 | 4_4:-67891260 | None:intergenic |
CTTTGTCTTGGAGTTGGAGT+TGG | 0.387030 | 4_4:-67890234 | None:intergenic |
ATAAGTTGCCTGCACGCCTT+CGG | 0.392038 | 4_4:+67896128 | Msa0697870:CDS |
TGGCATACGAGAATATTTCT+TGG | 0.392689 | 4_4:+67895224 | Msa0697870:CDS |
CCTCCATTTATTCGCTCATC+TGG | 0.395092 | 4_4:-67892991 | None:intergenic |
ATGCAGGGATGCGTCTTTAT+GGG | 0.398998 | 4_4:+67893326 | Msa0697870:CDS |
ATACAGAAATTGAACTGAAA+AGG | 0.399496 | 4_4:+67896239 | Msa0697870:CDS |
AGGCGCTCTTCCCGTCTGTT+TGG | 0.402265 | 4_4:-67890360 | None:intergenic |
TTTCTTCTTTGTCTTGGAGT+TGG | 0.402277 | 4_4:-67890240 | None:intergenic |
TTTAGATAAGGAAAGGACTT+TGG | 0.408271 | 4_4:-67890158 | None:intergenic |
TTTCGACTAAGTTGGATACT+AGG | 0.408928 | 4_4:+67891089 | Msa0697870:CDS |
TATGTCAATTATTCTTGTGC+TGG | 0.409928 | 4_4:-67890104 | None:intergenic |
AAGCTTTGTTTCAGCTGTCT+GGG | 0.412861 | 4_4:-67895112 | None:intergenic |
CTAATTTAGTGCTTTCCCTC+TGG | 0.412867 | 4_4:+67896516 | Msa0697870:three_prime_UTR |
CTTCTTTCTTGCTTTGACAA+TGG | 0.414823 | 4_4:-67892033 | None:intergenic |
AAGCATTTACAATTTCTTCC+CGG | 0.417927 | 4_4:-67893420 | None:intergenic |
CGCTCTTCCCGTCTGTTTGG+TGG | 0.420293 | 4_4:-67890357 | None:intergenic |
TCCAAAGTGTACTATCTAGA+AGG | 0.422812 | 4_4:-67895140 | None:intergenic |
GCGCCGGCCGTGCTGGTTGT+GGG | 0.424580 | 4_4:+67890334 | Msa0697870:CDS |
AAGCTCAGTCACGTGGCCTC+TGG | 0.425374 | 4_4:+67895069 | Msa0697870:CDS |
CTCCAATGATGATTTCAAAC+AGG | 0.429013 | 4_4:+67891258 | Msa0697870:CDS |
CACCACCGACGTGGTTGAAC+TGG | 0.431077 | 4_4:-67890405 | None:intergenic |
CTGCAGATGCATGGAGGACT+TGG | 0.434256 | 4_4:+67894688 | Msa0697870:intron |
TTGAAGAAATACTACAAAAG+AGG | 0.443086 | 4_4:+67892088 | Msa0697870:CDS |
GTCTTGAAGATTGTAGTGAT+TGG | 0.444388 | 4_4:+67891002 | Msa0697870:CDS |
GTCGCGCCTCCTGATAAGTT+TGG | 0.444868 | 4_4:+67892807 | Msa0697870:CDS |
TCAATTATTCTTGTGCTGGC+TGG | 0.452979 | 4_4:-67890100 | None:intergenic |
TGCTATTATGTCTCAGGTAC+AGG | 0.454592 | 4_4:-67896658 | None:intergenic |
CTAGTCTGCTATTATGTCTC+AGG | 0.454704 | 4_4:-67896664 | None:intergenic |
TGTGATTGTTTCGACTAAGT+TGG | 0.455967 | 4_4:+67891081 | Msa0697870:CDS |
TGAGTATCTAAGTGGCCATC+AGG | 0.457017 | 4_4:+67894374 | Msa0697870:CDS |
GCATCCTTGGAGGAGAAATT+GGG | 0.457953 | 4_4:+67892006 | Msa0697870:CDS |
TATTTCATATGAAGAGTAAT+GGG | 0.459153 | 4_4:-67890445 | None:intergenic |
TGTCTTGGAGTTGGAGTTGG+TGG | 0.469942 | 4_4:-67890231 | None:intergenic |
GCTGCTTTGCTGCAGATGCA+TGG | 0.473544 | 4_4:+67894679 | Msa0697870:intron |
GTGATATAAATCAAGAATTG+AGG | 0.473579 | 4_4:+67892288 | Msa0697870:CDS |
TAGATAGTACACTTTGGAAT+CGG | 0.477027 | 4_4:+67895145 | Msa0697870:CDS |
TTAATCACCTGATGAAGAAA+AGG | 0.478366 | 4_4:-67893616 | None:intergenic |
CACCAAATGAATCTAAGAAC+TGG | 0.480476 | 4_4:-67894948 | None:intergenic |
TATCCTTCTCTATAGAATGC+AGG | 0.480994 | 4_4:+67893310 | Msa0697870:intron |
TACAGAAATTGAACTGAAAA+GGG | 0.482398 | 4_4:+67896240 | Msa0697870:CDS |
ACCAATCTGCAACTTTCACT+GGG | 0.486344 | 4_4:+67896202 | Msa0697870:CDS |
TCTTCCTTTCTCCTTCAACT+TGG | 0.486429 | 4_4:-67892466 | None:intergenic |
AGGGACCTGGATTTGGGAAA+GGG | 0.489850 | 4_4:-67890539 | None:intergenic |
AGGTCCTCCCGAAGGCGTGC+AGG | 0.495111 | 4_4:-67896136 | None:intergenic |
GGCCATACAGGCACAGGCAC+GGG | 0.495586 | 4_4:+67890925 | Msa0697870:CDS |
AAGCTTAGATAGAGGTAAAG+AGG | 0.495966 | 4_4:-67896595 | None:intergenic |
CGATGCTCCTTCTCAAGAAG+TGG | 0.500444 | 4_4:-67892245 | None:intergenic |
TGATTCTCCATTCTTTACTT+CGG | 0.501902 | 4_4:+67891192 | Msa0697870:CDS |
ATAAACAATCCTTTCAGAAG+AGG | 0.502061 | 4_4:-67895178 | None:intergenic |
TAACATTACATGTAACTTGA+AGG | 0.504913 | 4_4:+67896462 | Msa0697870:three_prime_UTR |
GGATTTGGGAAAGGGACATA+TGG | 0.507538 | 4_4:-67890531 | None:intergenic |
GGTGCATTTGTTGGTGCCGA+TGG | 0.507607 | 4_4:+67893012 | Msa0697870:CDS |
TCGGTGCCTTCTGGAAGAGT+TGG | 0.507960 | 4_4:+67891211 | Msa0697870:CDS |
GTGGCCATCAGGTGTTCCTC+AGG | 0.508175 | 4_4:+67894385 | Msa0697870:CDS |
CTGAGCTTTACTTCTAGTTG+TGG | 0.513837 | 4_4:-67895054 | None:intergenic |
TCAAATTATATTCAGCACAC+TGG | 0.515656 | 4_4:+67892437 | Msa0697870:intron |
AAGCAAGAAAGAAGTAGGAT+AGG | 0.516003 | 4_4:+67892042 | Msa0697870:CDS |
ATAAATGGAGGTGCATTTGT+TGG | 0.517617 | 4_4:+67893003 | Msa0697870:CDS |
AGTGGGATCATTACAAGCAT+TGG | 0.518266 | 4_4:-67894983 | None:intergenic |
TTGAATATATGAACCACTGC+TGG | 0.519819 | 4_4:+67896427 | Msa0697870:exon |
ACTGGATGAAGCCAAGTTGA+AGG | 0.521534 | 4_4:+67892455 | Msa0697870:CDS |
GCAGGCAACTTATCCACAAT+GGG | 0.524857 | 4_4:-67896118 | None:intergenic |
TGGCCCACAACCAGCACGGC+CGG | 0.525548 | 4_4:-67890337 | None:intergenic |
CAGTTCAACCACGTCGGTGG+TGG | 0.526497 | 4_4:+67890406 | Msa0697870:CDS |
TTTCCTCTTGATGCCCATTG+TGG | 0.528183 | 4_4:+67896105 | Msa0697870:CDS |
TATACTCAAAGCTTAGATAG+AGG | 0.528828 | 4_4:-67896603 | None:intergenic |
AGCACGGCCGGCGCGTCGAA+AGG | 0.528895 | 4_4:-67890325 | None:intergenic |
ACCTTCTAGATAGTACACTT+TGG | 0.529433 | 4_4:+67895139 | Msa0697870:CDS |
GATCATTCCACTTCTTGAGA+AGG | 0.529630 | 4_4:+67892238 | Msa0697870:CDS |
TGTCAAAGCAAGAAAGAAGT+AGG | 0.531849 | 4_4:+67892037 | Msa0697870:CDS |
TGCAAAGTTGTCGAAGGCAG+AGG | 0.532153 | 4_4:-67894415 | None:intergenic |
GAAGCCAAGTTGAAGGAGAA+AGG | 0.532201 | 4_4:+67892462 | Msa0697870:CDS |
TAAGGAAATAATAATAAAAG+TGG | 0.533072 | 4_4:+67890826 | Msa0697870:intron |
ATCCTTCTCTATAGAATGCA+GGG | 0.533792 | 4_4:+67893311 | Msa0697870:intron |
ATTTCTTCCCGGGTAATTGG+AGG | 0.533870 | 4_4:-67893409 | None:intergenic |
CAGTTCTTAGATTCATTTGG+TGG | 0.536557 | 4_4:+67894949 | Msa0697870:CDS |
GCCCATAAGAGCCTCAACTA+AGG | 0.536655 | 4_4:-67890380 | None:intergenic |
AGCATTTACAATTTCTTCCC+GGG | 0.538399 | 4_4:-67893419 | None:intergenic |
ATGATGGAACAAACTACTCT+AGG | 0.538851 | 4_4:+67893461 | Msa0697870:CDS |
CCTTCCCAATTTCTCCTCCA+AGG | 0.539759 | 4_4:-67892010 | None:intergenic |
TATGTCCCTTTCCCAAATCC+AGG | 0.542276 | 4_4:+67890534 | Msa0697870:CDS |
TTGTGTAATTGCTGTTGCAA+AGG | 0.542310 | 4_4:+67893576 | Msa0697870:CDS |
GTGTCTATTATGGTGAGATT+AGG | 0.543431 | 4_4:-67890863 | None:intergenic |
CTGTTTGAAATCATCATTGG+AGG | 0.543999 | 4_4:-67891257 | None:intergenic |
GAAGAAATTGTAAATGCTTG+TGG | 0.544926 | 4_4:+67893424 | Msa0697870:CDS |
ATGAAGAGTAATGGGCCGGC+GGG | 0.546779 | 4_4:-67890437 | None:intergenic |
GGCTTGCACCCTCTTCTGAA+AGG | 0.547455 | 4_4:+67895169 | Msa0697870:CDS |
TCAAGTGCCCTCCAATTACC+CGG | 0.547552 | 4_4:+67893401 | Msa0697870:CDS |
GAAGGCACCGAAGTAAAGAA+TGG | 0.547953 | 4_4:-67891199 | None:intergenic |
AACATTACATGTAACTTGAA+GGG | 0.549817 | 4_4:+67896463 | Msa0697870:three_prime_UTR |
GGACTAGTTGCTCCTGCACC+AGG | 0.550843 | 4_4:+67890890 | Msa0697870:CDS |
CACGCCTGAGGAACACCTGA+TGG | 0.551113 | 4_4:-67894389 | None:intergenic |
CTTACAGGTATTAGCTTGTG+AGG | 0.551276 | 4_4:-67893045 | None:intergenic |
GGTGCAGGAGCAACTAGTCC+TGG | 0.551746 | 4_4:-67890887 | None:intergenic |
TCATGATATGTTCTTGACCA+AGG | 0.556614 | 4_4:+67892494 | Msa0697870:CDS |
CCCCAGTGAAAGTTGCAGAT+TGG | 0.557267 | 4_4:-67896203 | None:intergenic |
AATTTGCATTACAACGCGCC+TGG | 0.559478 | 4_4:-67891038 | None:intergenic |
GGATAGGTGTGAGCAAACTT+AGG | 0.560619 | 4_4:+67892058 | Msa0697870:CDS |
ATATTTCATATGAAGAGTAA+TGG | 0.564525 | 4_4:-67890446 | None:intergenic |
GGGCCATACAGGCACAGGCA+CGG | 0.565838 | 4_4:+67890924 | Msa0697870:CDS |
TGCAGGGATGCGTCTTTATG+GGG | 0.567216 | 4_4:+67893327 | Msa0697870:CDS |
CTTTGTTTCAGCTGTCTGGG+TGG | 0.567373 | 4_4:-67895109 | None:intergenic |
CACTTCTTGAGAAGGAGCAT+CGG | 0.568800 | 4_4:+67892246 | Msa0697870:CDS |
TTTCTTCCCGGGTAATTGGA+GGG | 0.576915 | 4_4:-67893408 | None:intergenic |
CGGGAAGAGCGCCTTAGTTG+AGG | 0.577376 | 4_4:+67890369 | Msa0697870:CDS |
ATTGGAGCAACGCAACTACC+AGG | 0.580115 | 4_4:+67891020 | Msa0697870:CDS |
AAAGATTGTGAGTATCTAAG+TGG | 0.583085 | 4_4:+67894366 | Msa0697870:CDS |
GTTGTGGGCCACCAAACAGA+CGG | 0.583962 | 4_4:+67890349 | Msa0697870:CDS |
GTGTAGACGCAGGTGGCGAA+AGG | 0.584125 | 4_4:-67891150 | None:intergenic |
ACAAACAAATGTGCAAGAGA+AGG | 0.587825 | 4_4:+67895020 | Msa0697870:CDS |
AAATAGGGCCATACAGGCAC+AGG | 0.587978 | 4_4:+67890919 | Msa0697870:CDS |
ACATTACATGTAACTTGAAG+GGG | 0.589977 | 4_4:+67896464 | Msa0697870:three_prime_UTR |
TAAACAATCCTTTCAGAAGA+GGG | 0.590872 | 4_4:-67895177 | None:intergenic |
TGCAGGCAACTTATCCACAA+TGG | 0.590908 | 4_4:-67896119 | None:intergenic |
GTTGCCTGCACGCCTTCGGG+AGG | 0.591678 | 4_4:+67896132 | Msa0697870:CDS |
AGGAGCATCGGAGCGTGACA+AGG | 0.595430 | 4_4:+67892258 | Msa0697870:CDS |
ATAGTACACTTTGGAATCGG+AGG | 0.596031 | 4_4:+67895148 | Msa0697870:CDS |
CATACAGGCACAGGCACGGG+CGG | 0.596791 | 4_4:+67890928 | Msa0697870:CDS |
TTACAGGTATTAGCTTGTGA+GGG | 0.597671 | 4_4:-67893044 | None:intergenic |
TCAGAAGGACGTGAAAATTG+TGG | 0.598389 | 4_4:-67891115 | None:intergenic |
AGGAAAACTTCAACATCAGA+AGG | 0.598510 | 4_4:-67891130 | None:intergenic |
TCATATGAAGAGTAATGGGC+CGG | 0.598845 | 4_4:-67890441 | None:intergenic |
TTCCAGTTCAACCACGTCGG+TGG | 0.601584 | 4_4:+67890403 | Msa0697870:CDS |
TTGTGGGCCACCAAACAGAC+GGG | 0.604019 | 4_4:+67890350 | Msa0697870:CDS |
GAGGGACCTGGATTTGGGAA+AGG | 0.604316 | 4_4:-67890540 | None:intergenic |
AAGAAGGAGACTCGCAATGT+GGG | 0.605505 | 4_4:-67890471 | None:intergenic |
GGAGTTGAAGACATTCATGA+TGG | 0.606200 | 4_4:+67893445 | Msa0697870:CDS |
AGAAGATGTTGCATCCTTGG+AGG | 0.608682 | 4_4:+67891996 | Msa0697870:CDS |
GACATATGGTGAGAAAGAGA+AGG | 0.609488 | 4_4:-67890517 | None:intergenic |
TTTCTTCCTCCATTGTTGTG+TGG | 0.610275 | 4_4:-67890201 | None:intergenic |
AGGCAGAGGCAACACGCCTG+AGG | 0.612673 | 4_4:-67894401 | None:intergenic |
TCACACGCCTTTCGACGCGC+CGG | 0.619278 | 4_4:+67890318 | Msa0697870:CDS |
CAGTGGTTCATATATTCAAG+CGG | 0.622329 | 4_4:-67896423 | None:intergenic |
ACATATGGTGAGAAAGAGAA+GGG | 0.625084 | 4_4:-67890516 | None:intergenic |
GTGAGGGAACTGAACACCAT+CGG | 0.625618 | 4_4:-67893028 | None:intergenic |
AGTAACACACCACACAACAA+TGG | 0.628668 | 4_4:+67890192 | Msa0697870:exon |
TCAAGAAGTGGAATGATCAA+CGG | 0.629262 | 4_4:-67892233 | None:intergenic |
GGATTCTGCAAAGTTGTCGA+AGG | 0.629616 | 4_4:-67894421 | None:intergenic |
TATCCACAATGGGCATCAAG+AGG | 0.631215 | 4_4:-67896108 | None:intergenic |
AAATTGATCCTGAATTGTCA+AGG | 0.631423 | 4_4:+67891056 | Msa0697870:CDS |
GCACCACACGATATGTCTCA+TGG | 0.635950 | 4_4:+67894714 | Msa0697870:CDS |
TCTTTCTATGATAAACCAGA+GGG | 0.641899 | 4_4:-67896531 | None:intergenic |
TCAGAGAGGAGATAGCAAGA+AGG | 0.642604 | 4_4:-67890487 | None:intergenic |
TGCACAATATCATCGAGCAA+TGG | 0.644083 | 4_4:+67893351 | Msa0697870:CDS |
CAAGAAGGAGACTCGCAATG+TGG | 0.644912 | 4_4:-67890472 | None:intergenic |
AACTTACCAAACTTATCAGG+AGG | 0.646410 | 4_4:-67892813 | None:intergenic |
TATGAAGAGTAATGGGCCGG+CGG | 0.646689 | 4_4:-67890438 | None:intergenic |
CAAGTGCCCTCCAATTACCC+GGG | 0.652716 | 4_4:+67893402 | Msa0697870:CDS |
TTGGTGGCCCACAACCAGCA+CGG | 0.653038 | 4_4:-67890341 | None:intergenic |
CCAGAACCAACTCTTCCAGA+AGG | 0.654193 | 4_4:-67891217 | None:intergenic |
GCTTTGCTGCAGATGCATGG+AGG | 0.654747 | 4_4:+67894682 | Msa0697870:intron |
GCAGGGATGCGTCTTTATGG+GGG | 0.654781 | 4_4:+67893328 | Msa0697870:CDS |
TGTGATAGAACAGTTGCAGT+GGG | 0.655199 | 4_4:-67895000 | None:intergenic |
TGTGCTTGAATCAGTTCCAG+AGG | 0.655564 | 4_4:-67895085 | None:intergenic |
ATCTTTCTATGATAAACCAG+AGG | 0.658421 | 4_4:-67896532 | None:intergenic |
AGAAGTAAAGCTCAGTCACG+TGG | 0.668138 | 4_4:+67895062 | Msa0697870:CDS |
GGCTTCCAGTTCAACCACGT+CGG | 0.671549 | 4_4:+67890400 | Msa0697870:CDS |
CCATCAAGTGTAGACGCAGG+TGG | 0.674421 | 4_4:-67891157 | None:intergenic |
TTGTGATAGAACAGTTGCAG+TGG | 0.675737 | 4_4:-67895001 | None:intergenic |
CCAGATGAGCGAATAAATGG+AGG | 0.675913 | 4_4:+67892991 | Msa0697870:CDS |
AACACACCACACAACAATGG+AGG | 0.677554 | 4_4:+67890195 | Msa0697870:exon |
CTCACCATAATAGACACACC+AGG | 0.677974 | 4_4:+67890869 | Msa0697870:CDS |
CATCCATCAAGTGTAGACGC+AGG | 0.679396 | 4_4:-67891160 | None:intergenic |
GACAGCTGAAACAAAGCTTG+CGG | 0.680189 | 4_4:+67895116 | Msa0697870:CDS |
AAGACAAAGAAGAAAACGAG+TGG | 0.685207 | 4_4:+67890248 | Msa0697870:CDS |
CCTTGGAGGAGAAATTGGGA+AGG | 0.686239 | 4_4:+67892010 | Msa0697870:CDS |
CAGATTCTAGGTCCTCCCGA+AGG | 0.687299 | 4_4:-67896144 | None:intergenic |
GAGAAGGGTCATCATCAGAG+AGG | 0.690656 | 4_4:-67890501 | None:intergenic |
GTGGTGGCACCAAAACCCGC+CGG | 0.702784 | 4_4:+67890422 | Msa0697870:CDS |
AGACCATGAGACATATCGTG+TGG | 0.704609 | 4_4:-67894717 | None:intergenic |
ACACTCAGAAGATCCAGCAG+TGG | 0.718528 | 4_4:-67896440 | None:intergenic |
CCAATCTGCAACTTTCACTG+GGG | 0.760994 | 4_4:+67896203 | Msa0697870:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATAAATAATTTTTTAAAA+GGG | - | chr4_4:67893137-67893156 | None:intergenic | 0.0% |
!!! | ATTATAAATAATTTTTTAAA+AGG | - | chr4_4:67893138-67893157 | None:intergenic | 0.0% |
!!! | AATTTTTTTTTCTTTTCTTT+TGG | + | chr4_4:67893155-67893174 | Msa0697870:intron | 10.0% |
!! | AAAGAATTATATATTAGTTA+GGG | - | chr4_4:67893867-67893886 | None:intergenic | 10.0% |
!!! | TATTTTTTTCTCATAAATTT+TGG | - | chr4_4:67895593-67895612 | None:intergenic | 10.0% |
!! | TATGAGAAAAAAATATAATT+TGG | + | chr4_4:67895598-67895617 | Msa0697870:intron | 10.0% |
!!! | TTAACATAATAATTGATTTA+AGG | + | chr4_4:67895682-67895701 | Msa0697870:intron | 10.0% |
!!! | TGTTTTTTGAATTTTAGATA+AGG | - | chr4_4:67890173-67890192 | None:intergenic | 15.0% |
!!! | AAGAAATTGATAATAAAAGA+GGG | - | chr4_4:67890561-67890580 | None:intergenic | 15.0% |
!! | TAAGGAAATAATAATAAAAG+TGG | + | chr4_4:67890826-67890845 | Msa0697870:intron | 15.0% |
!! | ATAGTTTAATTCAATTCTAT+CGG | + | chr4_4:67891498-67891517 | Msa0697870:intron | 15.0% |
!!! | AAATATTTTGTTATCTTCAT+AGG | + | chr4_4:67892326-67892345 | Msa0697870:intron | 15.0% |
!! | CAAAGAATTATATATTAGTT+AGG | - | chr4_4:67893868-67893887 | None:intergenic | 15.0% |
!!! | TTTAATTTTGAAGAATAGAT+TGG | - | chr4_4:67894120-67894139 | None:intergenic | 15.0% |
!!! | AATTTTTTTTTTTTTGCCAA+TGG | + | chr4_4:67894279-67894298 | Msa0697870:intron | 15.0% |
!!! | TTTGAATTTTAGATAAGGAA+AGG | - | chr4_4:67890168-67890187 | None:intergenic | 20.0% |
!! | TATTTCATATGAAGAGTAAT+GGG | - | chr4_4:67890448-67890467 | None:intergenic | 20.0% |
!! | ATATTTCATATGAAGAGTAA+TGG | - | chr4_4:67890449-67890468 | None:intergenic | 20.0% |
!! | ATTACTCTTCATATGAAATA+TGG | + | chr4_4:67890448-67890467 | Msa0697870:CDS | 20.0% |
!!! | CAAGAAATTGATAATAAAAG+AGG | - | chr4_4:67890562-67890581 | None:intergenic | 20.0% |
!!! | CTTTAATCCTTTTTTTTTAG+AGG | + | chr4_4:67890714-67890733 | Msa0697870:intron | 20.0% |
!!! | TGATTAATTTTGACTAAACA+GGG | + | chr4_4:67890746-67890765 | Msa0697870:intron | 20.0% |
!! | TACTAGAGATAATTATTCAA+TGG | + | chr4_4:67891341-67891360 | Msa0697870:intron | 20.0% |
!! | TTATTATTGCAAAATGTTAG+TGG | + | chr4_4:67891612-67891631 | Msa0697870:intron | 20.0% |
!! | AATTTGTGATATTAAAACCT+TGG | - | chr4_4:67892514-67892533 | None:intergenic | 20.0% |
!! | ATGAAACAAACAGAATATTA+AGG | - | chr4_4:67892955-67892974 | None:intergenic | 20.0% |
!! | AAAACAATTGTATAACTTAC+AGG | - | chr4_4:67893063-67893082 | None:intergenic | 20.0% |
!!! | GTAAGTTATACAATTGTTTT+CGG | + | chr4_4:67893063-67893082 | Msa0697870:intron | 20.0% |
!! | TCATTAAGCAAATATTTGAT+AGG | + | chr4_4:67893281-67893300 | Msa0697870:intron | 20.0% |
!! | CTAACAAATTACTAATTGAA+AGG | - | chr4_4:67893663-67893682 | None:intergenic | 20.0% |
!!! | CTTTCAATTAGTAATTTGTT+AGG | + | chr4_4:67893661-67893680 | Msa0697870:intron | 20.0% |
!!! | ACTATGTTTCATTTTTTTGA+AGG | + | chr4_4:67893826-67893845 | Msa0697870:intron | 20.0% |
!!! | GTTTAAGATTTTGAGATAAT+TGG | + | chr4_4:67894023-67894042 | Msa0697870:intron | 20.0% |
!! | AGTAAAATAATTTCGTAGTT+TGG | + | chr4_4:67894224-67894243 | Msa0697870:intron | 20.0% |
!! | AAAAATGCATAATAAACCAT+TGG | - | chr4_4:67894298-67894317 | None:intergenic | 20.0% |
!!! | ATAAATTTTGGATTTGATTG+AGG | - | chr4_4:67895581-67895600 | None:intergenic | 20.0% |
!! | TCAAATAGAACAAAAAACAT+AGG | - | chr4_4:67895647-67895666 | None:intergenic | 20.0% |
!!! | ATAGATAATAATCTCTAGAA+GGG | - | chr4_4:67895796-67895815 | None:intergenic | 20.0% |
!! | AATAGATAATAATCTCTAGA+AGG | - | chr4_4:67895797-67895816 | None:intergenic | 20.0% |
!! | ATAATTCACAATTATTGACA+TGG | - | chr4_4:67896019-67896038 | None:intergenic | 20.0% |
!! | AGATAGAAAGGAAAATAATA+GGG | - | chr4_4:67896045-67896064 | None:intergenic | 20.0% |
!! | AAGATAGAAAGGAAAATAAT+AGG | - | chr4_4:67896046-67896065 | None:intergenic | 20.0% |
!! | ATTGCATAATTTATATGTCT+TGG | + | chr4_4:67896264-67896283 | Msa0697870:intron | 20.0% |
! | ACAATATTACTGCATATGTT+TGG | + | chr4_4:67890584-67890603 | Msa0697870:intron | 25.0% |
! | TGAATGTAAATGTAAATGTG+AGG | + | chr4_4:67890648-67890667 | Msa0697870:intron | 25.0% |
! | GAATGTAAATGTAAATGTGA+GGG | + | chr4_4:67890649-67890668 | Msa0697870:intron | 25.0% |
! | AAAATTGTGAGGACTAAAAT+GGG | + | chr4_4:67890690-67890709 | Msa0697870:intron | 25.0% |
!! | TTGTTAGCCTCTAAAAAAAA+AGG | - | chr4_4:67890724-67890743 | None:intergenic | 25.0% |
!!! | CTGATTAATTTTGACTAAAC+AGG | + | chr4_4:67890745-67890764 | Msa0697870:intron | 25.0% |
!! | GAATCTGAAATGAAATGAAA+GGG | - | chr4_4:67891297-67891316 | None:intergenic | 25.0% |
!! | TGAATCTGAAATGAAATGAA+AGG | - | chr4_4:67891298-67891317 | None:intergenic | 25.0% |
!!! | AAAGTTTTTTCTGCTTTTCT+AGG | - | chr4_4:67891549-67891568 | None:intergenic | 25.0% |
! | TGTTAGTGGTTAATTTATCA+AGG | + | chr4_4:67891626-67891645 | Msa0697870:intron | 25.0% |
! | GTTAGTGGTTAATTTATCAA+GGG | + | chr4_4:67891627-67891646 | Msa0697870:intron | 25.0% |
! | AAGAAGAAGAATAAAAACTC+TGG | - | chr4_4:67891927-67891946 | None:intergenic | 25.0% |
! | TTGAAGAAATACTACAAAAG+AGG | + | chr4_4:67892088-67892107 | Msa0697870:CDS | 25.0% |
! | GTGATATAAATCAAGAATTG+AGG | + | chr4_4:67892288-67892307 | Msa0697870:CDS | 25.0% |
!!! | TTTTGTTATCTTCATAGGAA+AGG | + | chr4_4:67892331-67892350 | Msa0697870:intron | 25.0% |
!! | TTTGTTATCTTCATAGGAAA+GGG | + | chr4_4:67892332-67892351 | Msa0697870:intron | 25.0% |
!! | CTTAAAAAAAAGCATACTAG+TGG | - | chr4_4:67892647-67892666 | None:intergenic | 25.0% |
! | GATAGAAAATATTTGAGTCA+GGG | - | chr4_4:67892754-67892773 | None:intergenic | 25.0% |
! | AGATAGAAAATATTTGAGTC+AGG | - | chr4_4:67892755-67892774 | None:intergenic | 25.0% |
! | TATTCTGTTTGTTTCATTTC+AGG | + | chr4_4:67892958-67892977 | Msa0697870:intron | 25.0% |
!! | GTGTGGATTTTATATTTGTA+CGG | + | chr4_4:67893218-67893237 | Msa0697870:intron | 25.0% |
!!! | ATTTTTAATTTTGACCAACC+AGG | + | chr4_4:67893548-67893567 | Msa0697870:intron | 25.0% |
!! | AAGGAATATTTTCACTTCTA+TGG | - | chr4_4:67893644-67893663 | None:intergenic | 25.0% |
!!! | TTAGTAATTTGTTAGGACTT+AGG | + | chr4_4:67893668-67893687 | Msa0697870:intron | 25.0% |
!!! | TTCTTTGTTTTTGATACAGT+TGG | + | chr4_4:67893881-67893900 | Msa0697870:intron | 25.0% |
!!! | TCTTTGTTTTTGATACAGTT+GGG | + | chr4_4:67893882-67893901 | Msa0697870:intron | 25.0% |
! | GAAGAAGATAAAAAGAGATT+GGG | - | chr4_4:67893941-67893960 | None:intergenic | 25.0% |
! | TGAAGAAGATAAAAAGAGAT+TGG | - | chr4_4:67893942-67893961 | None:intergenic | 25.0% |
!! | AATCTCTTTTTATCTTCTTC+AGG | + | chr4_4:67893941-67893960 | Msa0697870:CDS | 25.0% |
!! | TGGTTTATTATGCATTTTTG+TGG | + | chr4_4:67894299-67894318 | Msa0697870:intron | 25.0% |
! | GAAACAAAATGCATAAATAC+AGG | - | chr4_4:67894340-67894359 | None:intergenic | 25.0% |
!!! | ACAAGCTTCATTTTAGTTTT+GGG | + | chr4_4:67894576-67894595 | Msa0697870:intron | 25.0% |
! | GTCTAGGTTAAATTCAAATT+AGG | - | chr4_4:67894793-67894812 | None:intergenic | 25.0% |
! | TTTATACTATAAGAACCTCT+AGG | + | chr4_4:67894828-67894847 | Msa0697870:intron | 25.0% |
!! | GCAAATAATATTTTACCTAG+AGG | - | chr4_4:67894846-67894865 | None:intergenic | 25.0% |
! | TTGGTACAACAAATATTTCA+TGG | + | chr4_4:67895204-67895223 | Msa0697870:CDS | 25.0% |
! | TATATGCATCTTTATGTGTT+TGG | + | chr4_4:67895291-67895310 | Msa0697870:intron | 25.0% |
! | GATAGAAAGGAAAATAATAG+GGG | - | chr4_4:67896044-67896063 | None:intergenic | 25.0% |
! | ATACAGAAATTGAACTGAAA+AGG | + | chr4_4:67896239-67896258 | Msa0697870:CDS | 25.0% |
! | TACAGAAATTGAACTGAAAA+GGG | + | chr4_4:67896240-67896259 | Msa0697870:CDS | 25.0% |
! | TCTTTGTAAATTGTTCACAA+GGG | - | chr4_4:67896293-67896312 | None:intergenic | 25.0% |
! | ATCTTTGTAAATTGTTCACA+AGG | - | chr4_4:67896294-67896313 | None:intergenic | 25.0% |
! | TTGTGAACAATTTACAAAGA+TGG | + | chr4_4:67896293-67896312 | Msa0697870:intron | 25.0% |
! | TAACATTACATGTAACTTGA+AGG | + | chr4_4:67896462-67896481 | Msa0697870:three_prime_UTR | 25.0% |
! | AACATTACATGTAACTTGAA+GGG | + | chr4_4:67896463-67896482 | Msa0697870:three_prime_UTR | 25.0% |
TATGTCAATTATTCTTGTGC+TGG | - | chr4_4:67890107-67890126 | None:intergenic | 30.0% | |
TTTAGATAAGGAAAGGACTT+TGG | - | chr4_4:67890161-67890180 | None:intergenic | 30.0% | |
GAAAATTGTGAGGACTAAAA+TGG | + | chr4_4:67890689-67890708 | Msa0697870:intron | 30.0% | |
! | ATGTTGTCAATTTTCAGCTA+AGG | + | chr4_4:67890808-67890827 | Msa0697870:intron | 30.0% |
AAATTGATCCTGAATTGTCA+AGG | + | chr4_4:67891056-67891075 | Msa0697870:CDS | 30.0% | |
TGATTCTCCATTCTTTACTT+CGG | + | chr4_4:67891192-67891211 | Msa0697870:CDS | 30.0% | |
! | AACCTGTTTGAAATCATCAT+TGG | - | chr4_4:67891263-67891282 | None:intergenic | 30.0% |
TAAAACAAGACAACGTGTAT+TGG | - | chr4_4:67891435-67891454 | None:intergenic | 30.0% | |
TGGTTAATTTATCAAGGGTA+GGG | + | chr4_4:67891632-67891651 | Msa0697870:intron | 30.0% | |
! | TAGAATATCTAAGATACCGA+AGG | - | chr4_4:67891740-67891759 | None:intergenic | 30.0% |
CAATAAATCCTAAACTCACA+AGG | - | chr4_4:67891849-67891868 | None:intergenic | 30.0% | |
GATCTATTTAGCTGTACTTA+TGG | + | chr4_4:67891947-67891966 | Msa0697870:intron | 30.0% | |
ACAACAACAAATTCTACTGT+AGG | - | chr4_4:67892118-67892137 | None:intergenic | 30.0% | |
TCAAATTATATTCAGCACAC+TGG | + | chr4_4:67892437-67892456 | Msa0697870:intron | 30.0% | |
AGTATCCGATTATGCTTTAT+TGG | + | chr4_4:67892547-67892566 | Msa0697870:intron | 30.0% | |
! | GTATCCGATTATGCTTTATT+GGG | + | chr4_4:67892548-67892567 | Msa0697870:intron | 30.0% |
TTCACCCAATAAAGCATAAT+CGG | - | chr4_4:67892555-67892574 | None:intergenic | 30.0% | |
! | AGTATAAAAGCACACATATG+CGG | - | chr4_4:67892714-67892733 | None:intergenic | 30.0% |
ATAAGTTTGGTAAGTTTCCT+AGG | + | chr4_4:67892820-67892839 | Msa0697870:intron | 30.0% | |
AGCATTATCTACTATTCGTT+AGG | - | chr4_4:67892864-67892883 | None:intergenic | 30.0% | |
ATATAAAATCCACACGAAAG+TGG | - | chr4_4:67893213-67893232 | None:intergenic | 30.0% | |
! | TGGATTTTATATTTGTACGG+AGG | + | chr4_4:67893221-67893240 | Msa0697870:intron | 30.0% |
TAAGCAAATATTTGATAGGC+TGG | + | chr4_4:67893285-67893304 | Msa0697870:intron | 30.0% | |
AAGCATTTACAATTTCTTCC+CGG | - | chr4_4:67893423-67893442 | None:intergenic | 30.0% | |
GAAGAAATTGTAAATGCTTG+TGG | + | chr4_4:67893424-67893443 | Msa0697870:CDS | 30.0% | |
! | ATTTGAACCTTTTCTTCATC+AGG | + | chr4_4:67893609-67893628 | Msa0697870:CDS | 30.0% |
TTAATCACCTGATGAAGAAA+AGG | - | chr4_4:67893619-67893638 | None:intergenic | 30.0% | |
TCAACTTACACAATTACGTT+AGG | + | chr4_4:67893699-67893718 | Msa0697870:intron | 30.0% | |
TAGGAGCTGATTAAGAATAA+AGG | + | chr4_4:67893718-67893737 | Msa0697870:intron | 30.0% | |
AGGAGCTGATTAAGAATAAA+GGG | + | chr4_4:67893719-67893738 | Msa0697870:intron | 30.0% | |
!! | AAAGGGAATTTTGAGTAGTT+AGG | + | chr4_4:67893736-67893755 | Msa0697870:intron | 30.0% |
!! | AAGGGAATTTTGAGTAGTTA+GGG | + | chr4_4:67893737-67893756 | Msa0697870:intron | 30.0% |
GTTGAATAGGTTAGGTAAAT+AGG | + | chr4_4:67893759-67893778 | Msa0697870:intron | 30.0% | |
!!! | CTTTGTTTTTGATACAGTTG+GGG | + | chr4_4:67893883-67893902 | Msa0697870:intron | 30.0% |
TTTGAAGAATAGATTGGCAA+CGG | - | chr4_4:67894114-67894133 | None:intergenic | 30.0% | |
AAAGATTGTGAGTATCTAAG+TGG | + | chr4_4:67894366-67894385 | Msa0697870:CDS | 30.0% | |
! | AAGTGATGGTTAACTTTTCA+CGG | - | chr4_4:67894461-67894480 | None:intergenic | 30.0% |
TGGAAAGAAACTAAGCAATT+GGG | - | chr4_4:67894487-67894506 | None:intergenic | 30.0% | |
!!! | CACAAGCTTCATTTTAGTTT+TGG | + | chr4_4:67894575-67894594 | Msa0697870:intron | 30.0% |
GTTAACAATATTAGTACTCC+TGG | + | chr4_4:67894619-67894638 | Msa0697870:intron | 30.0% | |
!! | TAGATAGTACACTTTGGAAT+CGG | + | chr4_4:67895145-67895164 | Msa0697870:CDS | 30.0% |
TAAACAATCCTTTCAGAAGA+GGG | - | chr4_4:67895180-67895199 | None:intergenic | 30.0% | |
ATAAACAATCCTTTCAGAAG+AGG | - | chr4_4:67895181-67895200 | None:intergenic | 30.0% | |
! | TCTTCTGAAAGGATTGTTTA+TGG | + | chr4_4:67895180-67895199 | Msa0697870:CDS | 30.0% |
TGAAAGGATTGTTTATGGTT+TGG | + | chr4_4:67895185-67895204 | Msa0697870:CDS | 30.0% | |
CTTGGTTTCTACAGAATTAA+AGG | + | chr4_4:67895242-67895261 | Msa0697870:CDS | 30.0% | |
AGTATACAACCTAGAGTATA+TGG | + | chr4_4:67895378-67895397 | Msa0697870:intron | 30.0% | |
! | AAGAAGAATTTTTGTCCAAG+AGG | + | chr4_4:67895421-67895440 | Msa0697870:intron | 30.0% |
! | AGTAGGTCTGAAATTTACAA+TGG | - | chr4_4:67895515-67895534 | None:intergenic | 30.0% |
TCTTGAAGATATTTCACAGT+AGG | - | chr4_4:67895532-67895551 | None:intergenic | 30.0% | |
TACTGTGAAATATCTTCAAG+AGG | + | chr4_4:67895531-67895550 | Msa0697870:intron | 30.0% | |
! | ACAAAAAACATAGGTTTTCC+AGG | - | chr4_4:67895638-67895657 | None:intergenic | 30.0% |
ACACCGATAATTGATTGATT+TGG | + | chr4_4:67895977-67895996 | Msa0697870:intron | 30.0% | |
! | CACCGATAATTGATTGATTT+GGG | + | chr4_4:67895978-67895997 | Msa0697870:intron | 30.0% |
!! | ACCGATAATTGATTGATTTG+GGG | + | chr4_4:67895979-67895998 | Msa0697870:intron | 30.0% |
ACCCCAAATCAATCAATTAT+CGG | - | chr4_4:67895983-67896002 | None:intergenic | 30.0% | |
CAGTTGAACTGCAAAATATT+AGG | - | chr4_4:67896085-67896104 | None:intergenic | 30.0% | |
! | TCATGTCAAAAACATTTTCC+AGG | - | chr4_4:67896183-67896202 | None:intergenic | 30.0% |
ACATTACATGTAACTTGAAG+GGG | + | chr4_4:67896464-67896483 | Msa0697870:three_prime_UTR | 30.0% | |
TCTTTCTATGATAAACCAGA+GGG | - | chr4_4:67896534-67896553 | None:intergenic | 30.0% | |
ATCTTTCTATGATAAACCAG+AGG | - | chr4_4:67896535-67896554 | None:intergenic | 30.0% | |
AGGTAAAGAGGAAGATTTAT+AGG | - | chr4_4:67896586-67896605 | None:intergenic | 30.0% | |
TATACTCAAAGCTTAGATAG+AGG | - | chr4_4:67896606-67896625 | None:intergenic | 30.0% | |
TTTCTTCTTTGTCTTGGAGT+TGG | - | chr4_4:67890243-67890262 | None:intergenic | 35.0% | |
! | ACTCGTTTTCTTCTTTGTCT+TGG | - | chr4_4:67890249-67890268 | None:intergenic | 35.0% |
AAGACAAAGAAGAAAACGAG+TGG | + | chr4_4:67890248-67890267 | Msa0697870:CDS | 35.0% | |
ACATATGGTGAGAAAGAGAA+GGG | - | chr4_4:67890519-67890538 | None:intergenic | 35.0% | |
! | TTGATAATAAAAGAGGGACC+TGG | - | chr4_4:67890555-67890574 | None:intergenic | 35.0% |
TAAATGTGAGGGACCAAATT+GGG | + | chr4_4:67890660-67890679 | Msa0697870:intron | 35.0% | |
! | AATTTTCTCGCAACCCAATT+TGG | - | chr4_4:67890676-67890695 | None:intergenic | 35.0% |
GTGTCTATTATGGTGAGATT+AGG | - | chr4_4:67890866-67890885 | None:intergenic | 35.0% | |
GTCTTGAAGATTGTAGTGAT+TGG | + | chr4_4:67891002-67891021 | Msa0697870:CDS | 35.0% | |
TGTGATTGTTTCGACTAAGT+TGG | + | chr4_4:67891081-67891100 | Msa0697870:CDS | 35.0% | |
! | TTTCGACTAAGTTGGATACT+AGG | + | chr4_4:67891089-67891108 | Msa0697870:CDS | 35.0% |
AGGAAAACTTCAACATCAGA+AGG | - | chr4_4:67891133-67891152 | None:intergenic | 35.0% | |
! | CTGTTTGAAATCATCATTGG+AGG | - | chr4_4:67891260-67891279 | None:intergenic | 35.0% |
CTCCAATGATGATTTCAAAC+AGG | + | chr4_4:67891258-67891277 | Msa0697870:CDS | 35.0% | |
AAAACATCAGACAGTGTGAT+TGG | + | chr4_4:67891372-67891391 | Msa0697870:intron | 35.0% | |
GTGGTTAATTTATCAAGGGT+AGG | + | chr4_4:67891631-67891650 | Msa0697870:intron | 35.0% | |
GGTTAATTTATCAAGGGTAG+GGG | + | chr4_4:67891633-67891652 | Msa0697870:intron | 35.0% | |
!! | AATAGCGTTGATTGGTGAAT+TGG | - | chr4_4:67891776-67891795 | None:intergenic | 35.0% |
!! | TTTCAGCAAATAGCGTTGAT+TGG | - | chr4_4:67891784-67891803 | None:intergenic | 35.0% |
CTTCTTTCTTGCTTTGACAA+TGG | - | chr4_4:67892036-67892055 | None:intergenic | 35.0% | |
TGTCAAAGCAAGAAAGAAGT+AGG | + | chr4_4:67892037-67892056 | Msa0697870:CDS | 35.0% | |
AAGCAAGAAAGAAGTAGGAT+AGG | + | chr4_4:67892042-67892061 | Msa0697870:CDS | 35.0% | |
! | ATCCTAAGAATGAACTTGCT+AGG | + | chr4_4:67892195-67892214 | Msa0697870:intron | 35.0% |
TACCTAGCAAGTTCATTCTT+AGG | - | chr4_4:67892200-67892219 | None:intergenic | 35.0% | |
TCAAGAAGTGGAATGATCAA+CGG | - | chr4_4:67892236-67892255 | None:intergenic | 35.0% | |
TCATGATATGTTCTTGACCA+AGG | + | chr4_4:67892494-67892513 | Msa0697870:CDS | 35.0% | |
GGGTGAATTTCTTCTATTGA+TGG | + | chr4_4:67892568-67892587 | Msa0697870:intron | 35.0% | |
TGGACAGATAAGTAAACTAG+TGG | - | chr4_4:67892676-67892695 | None:intergenic | 35.0% | |
TGCGGGTTCAAATCAAATAT+TGG | - | chr4_4:67892696-67892715 | None:intergenic | 35.0% | |
! | GTATAAAAGCACACATATGC+GGG | - | chr4_4:67892713-67892732 | None:intergenic | 35.0% |
AGAAAATATTTGAGTCAGGG+AGG | - | chr4_4:67892751-67892770 | None:intergenic | 35.0% | |
AACTTACCAAACTTATCAGG+AGG | - | chr4_4:67892816-67892835 | None:intergenic | 35.0% | |
GGAAACTTACCAAACTTATC+AGG | - | chr4_4:67892819-67892838 | None:intergenic | 35.0% | |
AAAAGAAATCTCACTGTCTC+AGG | + | chr4_4:67892891-67892910 | Msa0697870:intron | 35.0% | |
ATCTCCTTTCTCTTGGTAAA+TGG | + | chr4_4:67892916-67892935 | Msa0697870:intron | 35.0% | |
GTTACCATTTACCAAGAGAA+AGG | - | chr4_4:67892923-67892942 | None:intergenic | 35.0% | |
TTACCAGATGAGCGAATAAA+TGG | + | chr4_4:67892988-67893007 | Msa0697870:CDS | 35.0% | |
! | ATAAATGGAGGTGCATTTGT+TGG | + | chr4_4:67893003-67893022 | Msa0697870:CDS | 35.0% |
!! | TTACAGGTATTAGCTTGTGA+GGG | - | chr4_4:67893047-67893066 | None:intergenic | 35.0% |
TTGTAATTACCACTTTCGTG+TGG | + | chr4_4:67893201-67893220 | Msa0697870:intron | 35.0% | |
TATCCTTCTCTATAGAATGC+AGG | + | chr4_4:67893310-67893329 | Msa0697870:intron | 35.0% | |
ATCCTTCTCTATAGAATGCA+GGG | + | chr4_4:67893311-67893330 | Msa0697870:intron | 35.0% | |
! | GCTGAATTTCGTTTTGTAGT+TGG | + | chr4_4:67893373-67893392 | Msa0697870:CDS | 35.0% |
! | GAATTTCGTTTTGTAGTTGG+AGG | + | chr4_4:67893376-67893395 | Msa0697870:CDS | 35.0% |
AGCATTTACAATTTCTTCCC+GGG | - | chr4_4:67893422-67893441 | None:intergenic | 35.0% | |
! | ATGATGGAACAAACTACTCT+AGG | + | chr4_4:67893461-67893480 | Msa0697870:CDS | 35.0% |
! | TTGTGTAATTGCTGTTGCAA+AGG | + | chr4_4:67893576-67893595 | Msa0697870:CDS | 35.0% |
TTGAGTAGTTAGGGTTGAAT+AGG | + | chr4_4:67893746-67893765 | Msa0697870:intron | 35.0% | |
TAGTTAGGGTTGAATAGGTT+AGG | + | chr4_4:67893751-67893770 | Msa0697870:intron | 35.0% | |
! | AGGTTAGCTGGTTAGTTAAA+AGG | + | chr4_4:67893779-67893798 | Msa0697870:intron | 35.0% |
GAAAGAAACTAAGCAATTGG+GGG | - | chr4_4:67894485-67894504 | None:intergenic | 35.0% | |
GGAAAGAAACTAAGCAATTG+GGG | - | chr4_4:67894486-67894505 | None:intergenic | 35.0% | |
GTGGAAAGAAACTAAGCAAT+TGG | - | chr4_4:67894488-67894507 | None:intergenic | 35.0% | |
AAAATAGTAAGCAGACAACC+AGG | - | chr4_4:67894640-67894659 | None:intergenic | 35.0% | |
CACCAAATGAATCTAAGAAC+TGG | - | chr4_4:67894951-67894970 | None:intergenic | 35.0% | |
CAGTTCTTAGATTCATTTGG+TGG | + | chr4_4:67894949-67894968 | Msa0697870:CDS | 35.0% | |
ACAAACAAATGTGCAAGAGA+AGG | + | chr4_4:67895020-67895039 | Msa0697870:CDS | 35.0% | |
ACCTTCTAGATAGTACACTT+TGG | + | chr4_4:67895139-67895158 | Msa0697870:CDS | 35.0% | |
TCCAAAGTGTACTATCTAGA+AGG | - | chr4_4:67895143-67895162 | None:intergenic | 35.0% | |
TGGCATACGAGAATATTTCT+TGG | + | chr4_4:67895224-67895243 | Msa0697870:CDS | 35.0% | |
! | CCTGAAATTGAAGCTTGTTT+GGG | + | chr4_4:67895346-67895365 | Msa0697870:intron | 35.0% |
CAAACTTCACCATATACTCT+AGG | - | chr4_4:67895390-67895409 | None:intergenic | 35.0% | |
GAGTATATGGTGAAGTTTGA+TGG | + | chr4_4:67895391-67895410 | Msa0697870:intron | 35.0% | |
GCAGTGCATAAAAGATAGAA+AGG | - | chr4_4:67896057-67896076 | None:intergenic | 35.0% | |
CATCTTCAAAAGCAGATTCT+AGG | - | chr4_4:67896159-67896178 | None:intergenic | 35.0% | |
TTCCATGATGTCTAACTCTT+TGG | + | chr4_4:67896331-67896350 | Msa0697870:intron | 35.0% | |
CAGTGGTTCATATATTCAAG+CGG | - | chr4_4:67896426-67896445 | None:intergenic | 35.0% | |
TTGAATATATGAACCACTGC+TGG | + | chr4_4:67896427-67896446 | Msa0697870:exon | 35.0% | |
AAGCTTAGATAGAGGTAAAG+AGG | - | chr4_4:67896598-67896617 | None:intergenic | 35.0% | |
! | TCAATTATTCTTGTGCTGGC+TGG | - | chr4_4:67890103-67890122 | None:intergenic | 40.0% |
AGTAACACACCACACAACAA+TGG | + | chr4_4:67890192-67890211 | Msa0697870:exon | 40.0% | |
TTTCTTCCTCCATTGTTGTG+TGG | - | chr4_4:67890204-67890223 | None:intergenic | 40.0% | |
!! | TCATATGAAGAGTAATGGGC+CGG | - | chr4_4:67890444-67890463 | None:intergenic | 40.0% |
GACATATGGTGAGAAAGAGA+AGG | - | chr4_4:67890520-67890539 | None:intergenic | 40.0% | |
TAAAAGAGGGACCTGGATTT+GGG | - | chr4_4:67890548-67890567 | None:intergenic | 40.0% | |
ATAAAAGAGGGACCTGGATT+TGG | - | chr4_4:67890549-67890568 | None:intergenic | 40.0% | |
GTAAATGTGAGGGACCAAAT+TGG | + | chr4_4:67890659-67890678 | Msa0697870:intron | 40.0% | |
ATATTGAAGCTGAGAATGCG+AGG | + | chr4_4:67890771-67890790 | Msa0697870:intron | 40.0% | |
TAGTCCTGGTGTGTCTATTA+TGG | - | chr4_4:67890876-67890895 | None:intergenic | 40.0% | |
TGCACCAGGTCGTAAAAATA+GGG | + | chr4_4:67890904-67890923 | Msa0697870:CDS | 40.0% | |
TCGTAAAAATAGGGCCATAC+AGG | + | chr4_4:67890913-67890932 | Msa0697870:CDS | 40.0% | |
ATCACAGTCCTTGACAATTC+AGG | - | chr4_4:67891067-67891086 | None:intergenic | 40.0% | |
TCAGAAGGACGTGAAAATTG+TGG | - | chr4_4:67891118-67891137 | None:intergenic | 40.0% | |
! | ACACTTGATGGATGCATTCT+TGG | + | chr4_4:67891169-67891188 | Msa0697870:CDS | 40.0% |
! | AAGACAACGTGTATTGGCAA+TGG | - | chr4_4:67891429-67891448 | None:intergenic | 40.0% |
! | TCAATTCTATCGGTTACTGC+TGG | + | chr4_4:67891508-67891527 | Msa0697870:intron | 40.0% |
ACACTAAAGGAGTTGTGTGT+AGG | - | chr4_4:67891693-67891712 | None:intergenic | 40.0% | |
!! | AGTCATGTCGCTTTCTTTCA+CGG | - | chr4_4:67891816-67891835 | None:intergenic | 40.0% |
TTGCAGTAGCAGTTGTATTC+AGG | + | chr4_4:67891866-67891885 | Msa0697870:intron | 40.0% | |
TGCAGTAGCAGTTGTATTCA+GGG | + | chr4_4:67891867-67891886 | Msa0697870:intron | 40.0% | |
TTAGCTGTACTTATGGATGC+AGG | + | chr4_4:67891954-67891973 | Msa0697870:intron | 40.0% | |
GATAGAAGATGTTGCATCCT+TGG | + | chr4_4:67891993-67892012 | Msa0697870:CDS | 40.0% | |
GATCATTCCACTTCTTGAGA+AGG | + | chr4_4:67892238-67892257 | Msa0697870:CDS | 40.0% | |
TTATCTTCATAGGAAAGGGC+AGG | + | chr4_4:67892336-67892355 | Msa0697870:intron | 40.0% | |
TATCTTCATAGGAAAGGGCA+GGG | + | chr4_4:67892337-67892356 | Msa0697870:intron | 40.0% | |
TCTTCCTTTCTCCTTCAACT+TGG | - | chr4_4:67892469-67892488 | None:intergenic | 40.0% | |
CAGATTAAATAGCCCTTCCT+TGG | - | chr4_4:67892609-67892628 | None:intergenic | 40.0% | |
CAAGGAAGGGCTATTTAATC+TGG | + | chr4_4:67892607-67892626 | Msa0697870:intron | 40.0% | |
! | AGCTGTCATTGCTGCTTAAA+GGG | + | chr4_4:67892778-67892797 | Msa0697870:intron | 40.0% |
TTATCCACAAATGAGAGCCT+AGG | - | chr4_4:67892840-67892859 | None:intergenic | 40.0% | |
TCAGGATATCTCCTTTCTCT+TGG | + | chr4_4:67892909-67892928 | Msa0697870:intron | 40.0% | |
!! | CTTACAGGTATTAGCTTGTG+AGG | - | chr4_4:67893048-67893067 | None:intergenic | 40.0% |
ATCCCTGCATTCTATAGAGA+AGG | - | chr4_4:67893316-67893335 | None:intergenic | 40.0% | |
TGCACAATATCATCGAGCAA+TGG | + | chr4_4:67893351-67893370 | Msa0697870:CDS | 40.0% | |
ACAATTTCTTCCCGGGTAAT+TGG | - | chr4_4:67893415-67893434 | None:intergenic | 40.0% | |
GGAGTTGAAGACATTCATGA+TGG | + | chr4_4:67893445-67893464 | Msa0697870:CDS | 40.0% | |
GGTTAGGTAAATAGGTTAGC+TGG | + | chr4_4:67893767-67893786 | Msa0697870:intron | 40.0% | |
AAGGAGTTACACGCATAGAT+AGG | + | chr4_4:67893798-67893817 | Msa0697870:intron | 40.0% | |
AGTTACACGCATAGATAGGA+AGG | + | chr4_4:67893802-67893821 | Msa0697870:intron | 40.0% | |
TCTTCACACAAGAGCTTGAA+GGG | - | chr4_4:67894186-67894205 | None:intergenic | 40.0% | |
ATCTTCACACAAGAGCTTGA+AGG | - | chr4_4:67894187-67894206 | None:intergenic | 40.0% | |
!! | TTCACGGCATGATTTTTCAG+TGG | - | chr4_4:67894445-67894464 | None:intergenic | 40.0% |
TCATGATTTCATTCGACGTG+TGG | - | chr4_4:67894507-67894526 | None:intergenic | 40.0% | |
AGCAAAGCAGCATGGAAAAA+TGG | - | chr4_4:67894670-67894689 | None:intergenic | 40.0% | |
CTCATGGTCTCTACACAATA+AGG | + | chr4_4:67894730-67894749 | Msa0697870:CDS | 40.0% | |
ACAGACTGTCATACAAGTCT+AGG | - | chr4_4:67894809-67894828 | None:intergenic | 40.0% | |
!!! | CACTGCCAACTTTTTAGAGT+CGG | + | chr4_4:67894914-67894933 | Msa0697870:intron | 40.0% |
!!! | ACTGCCAACTTTTTAGAGTC+GGG | + | chr4_4:67894915-67894934 | Msa0697870:intron | 40.0% |
CGCCAGTTCTTAGATTCATT+TGG | + | chr4_4:67894946-67894965 | Msa0697870:CDS | 40.0% | |
AGTGGGATCATTACAAGCAT+TGG | - | chr4_4:67894986-67895005 | None:intergenic | 40.0% | |
TGTGATAGAACAGTTGCAGT+GGG | - | chr4_4:67895003-67895022 | None:intergenic | 40.0% | |
TTGTGATAGAACAGTTGCAG+TGG | - | chr4_4:67895004-67895023 | None:intergenic | 40.0% | |
! | CTGAGCTTTACTTCTAGTTG+TGG | - | chr4_4:67895057-67895076 | None:intergenic | 40.0% |
!! | AAGCTTTGTTTCAGCTGTCT+GGG | - | chr4_4:67895115-67895134 | None:intergenic | 40.0% |
!! | ATAGTACACTTTGGAATCGG+AGG | + | chr4_4:67895148-67895167 | Msa0697870:CDS | 40.0% |
! | CTTTATGTGTTTGGTGACTC+TGG | + | chr4_4:67895300-67895319 | Msa0697870:intron | 40.0% |
TCAATTTCAGGCAAGAAAGG+AGG | - | chr4_4:67895337-67895356 | None:intergenic | 40.0% | |
GCTTCAATTTCAGGCAAGAA+AGG | - | chr4_4:67895340-67895359 | None:intergenic | 40.0% | |
! | GCCTGAAATTGAAGCTTGTT+TGG | + | chr4_4:67895345-67895364 | Msa0697870:intron | 40.0% |
CCCAAACAAGCTTCAATTTC+AGG | - | chr4_4:67895349-67895368 | None:intergenic | 40.0% | |
!! | ATCTGCTTTTGAAGATGACC+TGG | + | chr4_4:67896162-67896181 | Msa0697870:CDS | 40.0% |
ACCAATCTGCAACTTTCACT+GGG | + | chr4_4:67896202-67896221 | Msa0697870:CDS | 40.0% | |
CACCAAAGAGTTAGACATCA+TGG | - | chr4_4:67896336-67896355 | None:intergenic | 40.0% | |
CATGATGTCTAACTCTTTGG+TGG | + | chr4_4:67896334-67896353 | Msa0697870:intron | 40.0% | |
!! | CAGAGGGAAAGCACTAAATT+AGG | - | chr4_4:67896518-67896537 | None:intergenic | 40.0% |
CTAATTTAGTGCTTTCCCTC+TGG | + | chr4_4:67896516-67896535 | Msa0697870:three_prime_UTR | 40.0% | |
TGCTATTATGTCTCAGGTAC+AGG | - | chr4_4:67896661-67896680 | None:intergenic | 40.0% | |
CTAGTCTGCTATTATGTCTC+AGG | - | chr4_4:67896667-67896686 | None:intergenic | 40.0% | |
AACACACCACACAACAATGG+AGG | + | chr4_4:67890195-67890214 | Msa0697870:exon | 45.0% | |
CTTTGTCTTGGAGTTGGAGT+TGG | - | chr4_4:67890237-67890256 | None:intergenic | 45.0% | |
GCCTTAGTTGAGGCTCTTAT+GGG | + | chr4_4:67890379-67890398 | Msa0697870:CDS | 45.0% | |
AAGAAGGAGACTCGCAATGT+GGG | - | chr4_4:67890474-67890493 | None:intergenic | 45.0% | |
TCAGAGAGGAGATAGCAAGA+AGG | - | chr4_4:67890490-67890509 | None:intergenic | 45.0% | |
GGATTTGGGAAAGGGACATA+TGG | - | chr4_4:67890534-67890553 | None:intergenic | 45.0% | |
TATGTCCCTTTCCCAAATCC+AGG | + | chr4_4:67890534-67890553 | Msa0697870:CDS | 45.0% | |
TGGGTTGCGAGAAAATTGTG+AGG | + | chr4_4:67890679-67890698 | Msa0697870:intron | 45.0% | |
CTCACCATAATAGACACACC+AGG | + | chr4_4:67890869-67890888 | Msa0697870:CDS | 45.0% | |
!!! | CTATTTTTACGACCTGGTGC+AGG | - | chr4_4:67890905-67890924 | None:intergenic | 45.0% |
CTGCACCAGGTCGTAAAAAT+AGG | + | chr4_4:67890903-67890922 | Msa0697870:CDS | 45.0% | |
!!! | ATGGCCCTATTTTTACGACC+TGG | - | chr4_4:67890911-67890930 | None:intergenic | 45.0% |
TCGTGCAAAAATGCAGCACA+AGG | + | chr4_4:67890964-67890983 | Msa0697870:CDS | 45.0% | |
AATTTGCATTACAACGCGCC+TGG | - | chr4_4:67891041-67891060 | None:intergenic | 45.0% | |
!! | GAAGGCACCGAAGTAAAGAA+TGG | - | chr4_4:67891202-67891221 | None:intergenic | 45.0% |
!! | TTCTTTACTTCGGTGCCTTC+TGG | + | chr4_4:67891202-67891221 | Msa0697870:CDS | 45.0% |
! | ATTCTATCGGTTACTGCTGG+TGG | + | chr4_4:67891511-67891530 | Msa0697870:intron | 45.0% |
GGGGCGAATGTTATTAGTAG+AGG | + | chr4_4:67891652-67891671 | Msa0697870:intron | 45.0% | |
AGTTGTGTGTAGGAGGTTTG+AGG | - | chr4_4:67891683-67891702 | None:intergenic | 45.0% | |
CTAAAGGAGTTGTGTGTAGG+AGG | - | chr4_4:67891690-67891709 | None:intergenic | 45.0% | |
! | GGCATGGGTTAAGACACTAA+AGG | - | chr4_4:67891706-67891725 | None:intergenic | 45.0% |
CCTAAACTCACAAGGATCCA+GGG | - | chr4_4:67891841-67891860 | None:intergenic | 45.0% | |
TCCTAAACTCACAAGGATCC+AGG | - | chr4_4:67891842-67891861 | None:intergenic | 45.0% | |
AGAAGATGTTGCATCCTTGG+AGG | + | chr4_4:67891996-67892015 | Msa0697870:CDS | 45.0% | |
TGCATCCTTGGAGGAGAAAT+TGG | + | chr4_4:67892005-67892024 | Msa0697870:CDS | 45.0% | |
GCATCCTTGGAGGAGAAATT+GGG | + | chr4_4:67892006-67892025 | Msa0697870:CDS | 45.0% | |
GGATAGGTGTGAGCAAACTT+AGG | + | chr4_4:67892058-67892077 | Msa0697870:CDS | 45.0% | |
! | CACTTCTTGAGAAGGAGCAT+CGG | + | chr4_4:67892246-67892265 | Msa0697870:CDS | 45.0% |
! | ACTGGATGAAGCCAAGTTGA+AGG | + | chr4_4:67892455-67892474 | Msa0697870:CDS | 45.0% |
! | GAAGCCAAGTTGAAGGAGAA+AGG | + | chr4_4:67892462-67892481 | Msa0697870:CDS | 45.0% |
GGATATTAGAACTCCTGCCA+AGG | + | chr4_4:67892589-67892608 | Msa0697870:intron | 45.0% | |
ATTAGAACTCCTGCCAAGGA+AGG | + | chr4_4:67892593-67892612 | Msa0697870:intron | 45.0% | |
TTAGAACTCCTGCCAAGGAA+GGG | + | chr4_4:67892594-67892613 | Msa0697870:intron | 45.0% | |
TTAAATAGCCCTTCCTTGGC+AGG | - | chr4_4:67892605-67892624 | None:intergenic | 45.0% | |
! | CAGCTGTCATTGCTGCTTAA+AGG | + | chr4_4:67892777-67892796 | Msa0697870:intron | 45.0% |
GTTTCCTAGGCTCTCATTTG+TGG | + | chr4_4:67892833-67892852 | Msa0697870:intron | 45.0% | |
CCTCCATTTATTCGCTCATC+TGG | - | chr4_4:67892994-67893013 | None:intergenic | 45.0% | |
CCAGATGAGCGAATAAATGG+AGG | + | chr4_4:67892991-67893010 | Msa0697870:CDS | 45.0% | |
AATGCAGGGATGCGTCTTTA+TGG | + | chr4_4:67893325-67893344 | Msa0697870:CDS | 45.0% | |
ATGCAGGGATGCGTCTTTAT+GGG | + | chr4_4:67893326-67893345 | Msa0697870:CDS | 45.0% | |
TTTCTTCCCGGGTAATTGGA+GGG | - | chr4_4:67893411-67893430 | None:intergenic | 45.0% | |
ATTTCTTCCCGGGTAATTGG+AGG | - | chr4_4:67893412-67893431 | None:intergenic | 45.0% | |
ATTACACAAGCAGTCCTGGT+TGG | - | chr4_4:67893565-67893584 | None:intergenic | 45.0% | |
AGCAATTACACAAGCAGTCC+TGG | - | chr4_4:67893569-67893588 | None:intergenic | 45.0% | |
AGAGAGCCTTTATGAACCAG+TGG | + | chr4_4:67894069-67894088 | Msa0697870:intron | 45.0% | |
TGAGTATCTAAGTGGCCATC+AGG | + | chr4_4:67894374-67894393 | Msa0697870:CDS | 45.0% | |
GGATTCTGCAAAGTTGTCGA+AGG | - | chr4_4:67894424-67894443 | None:intergenic | 45.0% | |
AGACCATGAGACATATCGTG+TGG | - | chr4_4:67894720-67894739 | None:intergenic | 45.0% | |
! | CGACTCTAAAAAGTTGGCAG+TGG | - | chr4_4:67894916-67894935 | None:intergenic | 45.0% |
AGAAGTAAAGCTCAGTCACG+TGG | + | chr4_4:67895062-67895081 | Msa0697870:CDS | 45.0% | |
TGTGCTTGAATCAGTTCCAG+AGG | - | chr4_4:67895088-67895107 | None:intergenic | 45.0% | |
!! | CAAGCTTTGTTTCAGCTGTC+TGG | - | chr4_4:67895116-67895135 | None:intergenic | 45.0% |
GACAGCTGAAACAAAGCTTG+CGG | + | chr4_4:67895116-67895135 | Msa0697870:CDS | 45.0% | |
CATAAGCAGAAAGAGCCTCT+TGG | - | chr4_4:67895439-67895458 | None:intergenic | 45.0% | |
TTGGTAGAAACATCAGAGCC+TGG | + | chr4_4:67895617-67895636 | Msa0697870:intron | 45.0% | |
CTGAAGCTATGTTGCATGTG+TGG | - | chr4_4:67895745-67895764 | None:intergenic | 45.0% | |
CACACATGCAACATAGCTTC+AGG | + | chr4_4:67895743-67895762 | Msa0697870:intron | 45.0% | |
! | ATAGCTTCAGGTTCAGCACA+AGG | + | chr4_4:67895755-67895774 | Msa0697870:intron | 45.0% |
TTTCCTCTTGATGCCCATTG+TGG | + | chr4_4:67896105-67896124 | Msa0697870:CDS | 45.0% | |
TATCCACAATGGGCATCAAG+AGG | - | chr4_4:67896111-67896130 | None:intergenic | 45.0% | |
GCAGGCAACTTATCCACAAT+GGG | - | chr4_4:67896121-67896140 | None:intergenic | 45.0% | |
TGCAGGCAACTTATCCACAA+TGG | - | chr4_4:67896122-67896141 | None:intergenic | 45.0% | |
GACCAATCTGCAACTTTCAC+TGG | + | chr4_4:67896201-67896220 | Msa0697870:CDS | 45.0% | |
CCAATCTGCAACTTTCACTG+GGG | + | chr4_4:67896203-67896222 | Msa0697870:CDS | 45.0% | |
!! | TGGTGGTTTTGCAGATCAAG+AGG | + | chr4_4:67896351-67896370 | Msa0697870:intron | 45.0% |
!! | TATATAAAAAATAATAATGA+TGG | - | chr4_4:67892163-67892182 | None:intergenic | 5.0% |
!!! | TATAAATAATTTTTTAAAAG+GGG | - | chr4_4:67893136-67893155 | None:intergenic | 5.0% |
!! | ATAATAATAATAATAATACA+AGG | - | chr4_4:67895836-67895855 | None:intergenic | 5.0% |
TGTCTTGGAGTTGGAGTTGG+TGG | - | chr4_4:67890234-67890253 | None:intergenic | 50.0% | |
CGCCTTAGTTGAGGCTCTTA+TGG | + | chr4_4:67890378-67890397 | Msa0697870:CDS | 50.0% | |
GCCCATAAGAGCCTCAACTA+AGG | - | chr4_4:67890383-67890402 | None:intergenic | 50.0% | |
!! | TATGAAGAGTAATGGGCCGG+CGG | - | chr4_4:67890441-67890460 | None:intergenic | 50.0% |
CAAGAAGGAGACTCGCAATG+TGG | - | chr4_4:67890475-67890494 | None:intergenic | 50.0% | |
GAGAAGGGTCATCATCAGAG+AGG | - | chr4_4:67890504-67890523 | None:intergenic | 50.0% | |
AGGGACCTGGATTTGGGAAA+GGG | - | chr4_4:67890542-67890561 | None:intergenic | 50.0% | |
TGAAGCTGAGAATGCGAGGT+TGG | + | chr4_4:67890775-67890794 | Msa0697870:intron | 50.0% | |
AAATAGGGCCATACAGGCAC+AGG | + | chr4_4:67890919-67890938 | Msa0697870:CDS | 50.0% | |
ATTGGAGCAACGCAACTACC+AGG | + | chr4_4:67891020-67891039 | Msa0697870:CDS | 50.0% | |
CATCCATCAAGTGTAGACGC+AGG | - | chr4_4:67891163-67891182 | None:intergenic | 50.0% | |
CCAGAACCAACTCTTCCAGA+AGG | - | chr4_4:67891220-67891239 | None:intergenic | 50.0% | |
! | CCTTCTGGAAGAGTTGGTTC+TGG | + | chr4_4:67891217-67891236 | Msa0697870:CDS | 50.0% |
AGTGTCTTAACCCATGCCAC+TGG | + | chr4_4:67891708-67891727 | Msa0697870:intron | 50.0% | |
GTGTCTTAACCCATGCCACT+GGG | + | chr4_4:67891709-67891728 | Msa0697870:intron | 50.0% | |
CCCTGGATCCTTGTGAGTTT+AGG | + | chr4_4:67891838-67891857 | Msa0697870:intron | 50.0% | |
AGCAGTTGTATTCAGGGAGC+TGG | + | chr4_4:67891873-67891892 | Msa0697870:intron | 50.0% | |
CCTTCCCAATTTCTCCTCCA+AGG | - | chr4_4:67892013-67892032 | None:intergenic | 50.0% | |
CCTTGGAGGAGAAATTGGGA+AGG | + | chr4_4:67892010-67892029 | Msa0697870:CDS | 50.0% | |
CGATGCTCCTTCTCAAGAAG+TGG | - | chr4_4:67892248-67892267 | None:intergenic | 50.0% | |
GTGAGGGAACTGAACACCAT+CGG | - | chr4_4:67893031-67893050 | None:intergenic | 50.0% | |
TGCAGGGATGCGTCTTTATG+GGG | + | chr4_4:67893327-67893346 | Msa0697870:CDS | 50.0% | |
TCAAGTGCCCTCCAATTACC+CGG | + | chr4_4:67893401-67893420 | Msa0697870:CDS | 50.0% | |
TGCAAAGTTGTCGAAGGCAG+AGG | - | chr4_4:67894418-67894437 | None:intergenic | 50.0% | |
AAGCAATTGGGGGCAAGTGA+TGG | - | chr4_4:67894475-67894494 | None:intergenic | 50.0% | |
GCACCACACGATATGTCTCA+TGG | + | chr4_4:67894714-67894733 | Msa0697870:CDS | 50.0% | |
! | CCTGCCCGACTCTAAAAAGT+TGG | - | chr4_4:67894922-67894941 | None:intergenic | 50.0% |
!!! | CCAACTTTTTAGAGTCGGGC+AGG | + | chr4_4:67894919-67894938 | Msa0697870:intron | 50.0% |
! | CTTTGTTTCAGCTGTCTGGG+TGG | - | chr4_4:67895112-67895131 | None:intergenic | 50.0% |
ATAAGTTGCCTGCACGCCTT+CGG | + | chr4_4:67896128-67896147 | Msa0697870:CDS | 50.0% | |
CCCCAGTGAAAGTTGCAGAT+TGG | - | chr4_4:67896206-67896225 | None:intergenic | 50.0% | |
ACACTCAGAAGATCCAGCAG+TGG | - | chr4_4:67896443-67896462 | None:intergenic | 50.0% | |
GTTGTGGGCCACCAAACAGA+CGG | + | chr4_4:67890349-67890368 | Msa0697870:CDS | 55.0% | |
TTGTGGGCCACCAAACAGAC+GGG | + | chr4_4:67890350-67890369 | Msa0697870:CDS | 55.0% | |
GGCTTCCAGTTCAACCACGT+CGG | + | chr4_4:67890400-67890419 | Msa0697870:CDS | 55.0% | |
TTCCAGTTCAACCACGTCGG+TGG | + | chr4_4:67890403-67890422 | Msa0697870:CDS | 55.0% | |
!! | ATGAAGAGTAATGGGCCGGC+GGG | - | chr4_4:67890440-67890459 | None:intergenic | 55.0% |
GAGGGACCTGGATTTGGGAA+AGG | - | chr4_4:67890543-67890562 | None:intergenic | 55.0% | |
CCATCAAGTGTAGACGCAGG+TGG | - | chr4_4:67891160-67891179 | None:intergenic | 55.0% | |
CCACCTGCGTCTACACTTGA+TGG | + | chr4_4:67891157-67891176 | Msa0697870:CDS | 55.0% | |
! | TCGGTGCCTTCTGGAAGAGT+TGG | + | chr4_4:67891211-67891230 | Msa0697870:CDS | 55.0% |
GTTACTGCTGGTGGCATGCA+AGG | + | chr4_4:67891520-67891539 | Msa0697870:intron | 55.0% | |
AAGGAGTAGCCCAGTGGCAT+GGG | - | chr4_4:67891721-67891740 | None:intergenic | 55.0% | |
ATGCCACTGGGCTACTCCTT+CGG | + | chr4_4:67891721-67891740 | Msa0697870:intron | 55.0% | |
ATACCGAAGGAGTAGCCCAG+TGG | - | chr4_4:67891727-67891746 | None:intergenic | 55.0% | |
! | GAAAGCGACATGACTAGCCC+TGG | + | chr4_4:67891821-67891840 | Msa0697870:intron | 55.0% |
GTCGCGCCTCCTGATAAGTT+TGG | + | chr4_4:67892807-67892826 | Msa0697870:CDS | 55.0% | |
!! | GGTGCATTTGTTGGTGCCGA+TGG | + | chr4_4:67893012-67893031 | Msa0697870:CDS | 55.0% |
GCAGGGATGCGTCTTTATGG+GGG | + | chr4_4:67893328-67893347 | Msa0697870:CDS | 55.0% | |
CAAGTGCCCTCCAATTACCC+GGG | + | chr4_4:67893402-67893421 | Msa0697870:CDS | 55.0% | |
GCATCTGCAGCAAAGCAGCA+TGG | - | chr4_4:67894678-67894697 | None:intergenic | 55.0% | |
! | GCTGCTTTGCTGCAGATGCA+TGG | + | chr4_4:67894679-67894698 | Msa0697870:intron | 55.0% |
GCTTTGCTGCAGATGCATGG+AGG | + | chr4_4:67894682-67894701 | Msa0697870:intron | 55.0% | |
CTGCAGATGCATGGAGGACT+TGG | + | chr4_4:67894688-67894707 | Msa0697870:intron | 55.0% | |
GGCTTGCACCCTCTTCTGAA+AGG | + | chr4_4:67895169-67895188 | Msa0697870:CDS | 55.0% | |
TAAGTTGCCTGCACGCCTTC+GGG | + | chr4_4:67896129-67896148 | Msa0697870:CDS | 55.0% | |
CAGATTCTAGGTCCTCCCGA+AGG | - | chr4_4:67896147-67896166 | None:intergenic | 55.0% | |
! | TTGGTGGCCCACAACCAGCA+CGG | - | chr4_4:67890344-67890363 | None:intergenic | 60.0% |
CGCTCTTCCCGTCTGTTTGG+TGG | - | chr4_4:67890360-67890379 | None:intergenic | 60.0% | |
AGGCGCTCTTCCCGTCTGTT+TGG | - | chr4_4:67890363-67890382 | None:intergenic | 60.0% | |
!! | CGGGAAGAGCGCCTTAGTTG+AGG | + | chr4_4:67890369-67890388 | Msa0697870:CDS | 60.0% |
CACCACCGACGTGGTTGAAC+TGG | - | chr4_4:67890408-67890427 | None:intergenic | 60.0% | |
CAGTTCAACCACGTCGGTGG+TGG | + | chr4_4:67890406-67890425 | Msa0697870:CDS | 60.0% | |
!!! | TTTTGGTGCCACCACCGACG+TGG | - | chr4_4:67890417-67890436 | None:intergenic | 60.0% |
!!! | AGTAATGGGCCGGCGGGTTT+TGG | - | chr4_4:67890434-67890453 | None:intergenic | 60.0% |
GGTGCAGGAGCAACTAGTCC+TGG | - | chr4_4:67890890-67890909 | None:intergenic | 60.0% | |
!! | GGACTAGTTGCTCCTGCACC+AGG | + | chr4_4:67890890-67890909 | Msa0697870:CDS | 60.0% |
GTGTAGACGCAGGTGGCGAA+AGG | - | chr4_4:67891153-67891172 | None:intergenic | 60.0% | |
GAAGGAGTAGCCCAGTGGCA+TGG | - | chr4_4:67891722-67891741 | None:intergenic | 60.0% | |
!! | AGGAGCATCGGAGCGTGACA+AGG | + | chr4_4:67892258-67892277 | Msa0697870:CDS | 60.0% |
GTGGCCATCAGGTGTTCCTC+AGG | + | chr4_4:67894385-67894404 | Msa0697870:CDS | 60.0% | |
CACGCCTGAGGAACACCTGA+TGG | - | chr4_4:67894392-67894411 | None:intergenic | 60.0% | |
AAGCTCAGTCACGTGGCCTC+TGG | + | chr4_4:67895069-67895088 | Msa0697870:CDS | 60.0% | |
TCACACGCCTTTCGACGCGC+CGG | + | chr4_4:67890318-67890337 | Msa0697870:CDS | 65.0% | |
GTGGTGGCACCAAAACCCGC+CGG | + | chr4_4:67890422-67890441 | Msa0697870:CDS | 65.0% | |
GGGCCATACAGGCACAGGCA+CGG | + | chr4_4:67890924-67890943 | Msa0697870:CDS | 65.0% | |
GGCCATACAGGCACAGGCAC+GGG | + | chr4_4:67890925-67890944 | Msa0697870:CDS | 65.0% | |
CATACAGGCACAGGCACGGG+CGG | + | chr4_4:67890928-67890947 | Msa0697870:CDS | 65.0% | |
AGGCAGAGGCAACACGCCTG+AGG | - | chr4_4:67894404-67894423 | None:intergenic | 65.0% | |
TGGCCCACAACCAGCACGGC+CGG | - | chr4_4:67890340-67890359 | None:intergenic | 70.0% | |
CGCCCGTGCCTGTGCCTGTA+TGG | - | chr4_4:67890930-67890949 | None:intergenic | 70.0% | |
GTTGCCTGCACGCCTTCGGG+AGG | + | chr4_4:67896132-67896151 | Msa0697870:CDS | 70.0% | |
! | AGGTCCTCCCGAAGGCGTGC+AGG | - | chr4_4:67896139-67896158 | None:intergenic | 70.0% |
AGCACGGCCGGCGCGTCGAA+AGG | - | chr4_4:67890328-67890347 | None:intergenic | 75.0% | |
! | TTTCGACGCGCCGGCCGTGC+TGG | + | chr4_4:67890327-67890346 | Msa0697870:CDS | 75.0% |
!! | GCGCCGGCCGTGCTGGTTGT+GGG | + | chr4_4:67890334-67890353 | Msa0697870:CDS | 75.0% |
!!! | CGCGCCGGCCGTGCTGGTTG+TGG | + | chr4_4:67890333-67890352 | Msa0697870:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 67890093 | 67896713 | 67890093 | ID=Msa0697870;Name=Msa0697870 |
chr4_4 | mRNA | 67890093 | 67896713 | 67890093 | ID=Msa0697870-mRNA-1;Parent=Msa0697870;Name=Msa0697870-mRNA-1;_AED=0.05;_eAED=0.05;_QI=118|0.92|0.93|1|0.92|0.93|15|283|740 |
chr4_4 | exon | 67890093 | 67890555 | 67890093 | ID=Msa0697870-mRNA-1:exon:20123;Parent=Msa0697870-mRNA-1 |
chr4_4 | exon | 67890830 | 67891279 | 67890830 | ID=Msa0697870-mRNA-1:exon:20124;Parent=Msa0697870-mRNA-1 |
chr4_4 | exon | 67891976 | 67892109 | 67891976 | ID=Msa0697870-mRNA-1:exon:20125;Parent=Msa0697870-mRNA-1 |
chr4_4 | exon | 67892217 | 67892309 | 67892217 | ID=Msa0697870-mRNA-1:exon:20126;Parent=Msa0697870-mRNA-1 |
chr4_4 | exon | 67892452 | 67892515 | 67892452 | ID=Msa0697870-mRNA-1:exon:20127;Parent=Msa0697870-mRNA-1 |
chr4_4 | exon | 67892780 | 67892828 | 67892780 | ID=Msa0697870-mRNA-1:exon:20128;Parent=Msa0697870-mRNA-1 |
chr4_4 | exon | 67892980 | 67893062 | 67892980 | ID=Msa0697870-mRNA-1:exon:20129;Parent=Msa0697870-mRNA-1 |
chr4_4 | exon | 67893325 | 67893482 | 67893325 | ID=Msa0697870-mRNA-1:exon:20130;Parent=Msa0697870-mRNA-1 |
chr4_4 | exon | 67893570 | 67893630 | 67893570 | ID=Msa0697870-mRNA-1:exon:20131;Parent=Msa0697870-mRNA-1 |
chr4_4 | exon | 67893900 | 67893962 | 67893900 | ID=Msa0697870-mRNA-1:exon:20132;Parent=Msa0697870-mRNA-1 |
chr4_4 | exon | 67894366 | 67894466 | 67894366 | ID=Msa0697870-mRNA-1:exon:20133;Parent=Msa0697870-mRNA-1 |
chr4_4 | exon | 67894694 | 67894751 | 67894694 | ID=Msa0697870-mRNA-1:exon:20134;Parent=Msa0697870-mRNA-1 |
chr4_4 | exon | 67894931 | 67895263 | 67894931 | ID=Msa0697870-mRNA-1:exon:20135;Parent=Msa0697870-mRNA-1 |
chr4_4 | exon | 67896097 | 67896261 | 67896097 | ID=Msa0697870-mRNA-1:exon:20136;Parent=Msa0697870-mRNA-1 |
chr4_4 | exon | 67896365 | 67896713 | 67896365 | ID=Msa0697870-mRNA-1:exon:20137;Parent=Msa0697870-mRNA-1 |
chr4_4 | five_prime_UTR | 67890093 | 67890210 | 67890093 | ID=Msa0697870-mRNA-1:five_prime_utr;Parent=Msa0697870-mRNA-1 |
chr4_4 | CDS | 67890211 | 67890555 | 67890211 | ID=Msa0697870-mRNA-1:cds;Parent=Msa0697870-mRNA-1 |
chr4_4 | CDS | 67890830 | 67891279 | 67890830 | ID=Msa0697870-mRNA-1:cds;Parent=Msa0697870-mRNA-1 |
chr4_4 | CDS | 67891976 | 67892109 | 67891976 | ID=Msa0697870-mRNA-1:cds;Parent=Msa0697870-mRNA-1 |
chr4_4 | CDS | 67892217 | 67892309 | 67892217 | ID=Msa0697870-mRNA-1:cds;Parent=Msa0697870-mRNA-1 |
chr4_4 | CDS | 67892452 | 67892515 | 67892452 | ID=Msa0697870-mRNA-1:cds;Parent=Msa0697870-mRNA-1 |
chr4_4 | CDS | 67892780 | 67892828 | 67892780 | ID=Msa0697870-mRNA-1:cds;Parent=Msa0697870-mRNA-1 |
chr4_4 | CDS | 67892980 | 67893062 | 67892980 | ID=Msa0697870-mRNA-1:cds;Parent=Msa0697870-mRNA-1 |
chr4_4 | CDS | 67893325 | 67893482 | 67893325 | ID=Msa0697870-mRNA-1:cds;Parent=Msa0697870-mRNA-1 |
chr4_4 | CDS | 67893570 | 67893630 | 67893570 | ID=Msa0697870-mRNA-1:cds;Parent=Msa0697870-mRNA-1 |
chr4_4 | CDS | 67893900 | 67893962 | 67893900 | ID=Msa0697870-mRNA-1:cds;Parent=Msa0697870-mRNA-1 |
chr4_4 | CDS | 67894366 | 67894466 | 67894366 | ID=Msa0697870-mRNA-1:cds;Parent=Msa0697870-mRNA-1 |
chr4_4 | CDS | 67894694 | 67894751 | 67894694 | ID=Msa0697870-mRNA-1:cds;Parent=Msa0697870-mRNA-1 |
chr4_4 | CDS | 67894931 | 67895263 | 67894931 | ID=Msa0697870-mRNA-1:cds;Parent=Msa0697870-mRNA-1 |
chr4_4 | CDS | 67896097 | 67896261 | 67896097 | ID=Msa0697870-mRNA-1:cds;Parent=Msa0697870-mRNA-1 |
chr4_4 | CDS | 67896365 | 67896430 | 67896365 | ID=Msa0697870-mRNA-1:cds;Parent=Msa0697870-mRNA-1 |
chr4_4 | three_prime_UTR | 67896431 | 67896713 | 67896431 | ID=Msa0697870-mRNA-1:three_prime_utr;Parent=Msa0697870-mRNA-1 |
Gene Sequence |
Protein sequence |