AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0578770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0578770 MtrunA17_Chr4g0044181 96.970 660 18 2 1 659 1 659 0.0 1251
Msa0578770 MtrunA17_Chr1g0160461 78.274 672 82 15 1 659 1 621 0.0 970
Msa0578770 MtrunA17_Chr6g0478431 62.946 672 168 11 1 659 1 604 0.0 790
Msa0578770 MtrunA17_Chr7g0255941 61.300 677 158 13 1 659 1 591 0.0 749
Msa0578770 MtrunA17_Chr4g0071571 57.687 683 207 14 1 659 1 625 0.0 729
Msa0578770 MtrunA17_Chr1g0159341 45.619 662 222 15 1 659 1 527 4.97e-165 483
Msa0578770 MtrunA17_Chr8g0393111 62.682 343 95 6 1 338 1 315 3.06e-141 423
Msa0578770 MtrunA17_Chr8g0393111 63.235 204 34 3 449 629 332 517 1.67e-71 241
Msa0578770 MtrunA17_Chr4g0071551 75.117 213 52 1 1 212 1 213 1.22e-114 342
Msa0578770 MtrunA17_Chr4g0071561 75.342 146 36 0 490 635 171 316 1.92e-71 234
Msa0578770 MtrunA17_Chr4g0071561 34.641 153 81 6 218 355 1 149 1.68e-11 65.9
Msa0578770 MtrunA17_Chr2g0298971 47.410 251 110 3 1 251 1 229 2.52e-71 240
Msa0578770 MtrunA17_Chr2g0298971 44.681 188 73 3 482 638 330 517 6.09e-43 162
Msa0578770 MtrunA17_Chr7g0216571 65.190 158 55 0 502 659 210 367 3.41e-64 216
Msa0578770 MtrunA17_Chr7g0216571 54.430 158 72 0 1 158 12 169 4.74e-51 181
Msa0578770 MtrunA17_Chr6g0452821 62.577 163 59 1 499 659 198 360 5.38e-63 213
Msa0578770 MtrunA17_Chr6g0452821 54.430 158 71 1 1 157 1 158 3.15e-49 176
Msa0578770 MtrunA17_Chr7g0249141 50.000 170 80 1 488 657 195 359 1.62e-52 185
Msa0578770 MtrunA17_Chr7g0249141 51.613 155 75 0 1 155 1 155 6.09e-48 172
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0578770 AT1G70940.1 74.629 674 122 14 1 659 1 640 0.0 940
Msa0578770 AT2G01420.1 73.284 670 110 14 1 659 1 612 0.0 936
Msa0578770 AT2G01420.2 73.025 671 114 14 1 659 1 616 0.0 931
Msa0578770 AT1G23080.1 73.077 676 108 16 1 659 1 619 0.0 914
Msa0578770 AT1G23080.3 72.485 676 108 15 1 659 1 615 0.0 908
Msa0578770 AT1G23080.4 72.485 676 108 15 1 659 1 615 0.0 908
Msa0578770 AT2G01420.3 70.280 572 103 14 1 560 1 517 0.0 751
Msa0578770 AT1G23080.2 69.324 577 99 15 1 560 1 516 0.0 739
Msa0578770 AT5G57090.1 58.079 687 220 14 1 659 1 647 0.0 724
Msa0578770 AT1G73590.1 59.287 673 209 12 1 659 1 622 0.0 720
Msa0578770 AT5G57090.2 55.196 587 195 14 101 659 1 547 0.0 560
Msa0578770 AT1G77110.2 46.011 376 153 8 1 331 1 371 2.58e-98 312
Msa0578770 AT1G77110.2 56.784 199 78 3 446 637 351 548 2.79e-63 219
Msa0578770 AT1G77110.1 43.672 403 184 9 1 372 1 391 4.34e-98 312
Msa0578770 AT1G77110.1 57.466 221 86 3 446 659 351 570 8.10e-75 251
Msa0578770 AT5G15100.1 62.195 164 62 0 496 659 204 367 7.44e-61 207
Msa0578770 AT5G15100.1 48.023 177 82 2 1 172 1 172 1.07e-44 164
Msa0578770 AT5G16530.1 54.667 150 68 0 505 654 195 344 4.58e-53 186
Msa0578770 AT5G16530.1 52.866 157 74 0 1 157 1 157 3.04e-49 176
Msa0578770 AT5G16530.2 52.866 157 74 0 1 157 1 157 7.56e-50 177
Msa0578770 AT5G16530.2 52.555 137 65 0 502 638 192 328 3.37e-45 164

Find 212 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTCTATTGTTTCCTTTA+AGG 0.025864 4_1:-83405582 Msa0578770:CDS
CTTCCAAGTTTCCCAAAATT+TGG 0.036446 4_1:-83402366 Msa0578770:three_prime_UTR
TTAATGAAGTTCCCAAATTT+TGG 0.115422 4_1:+83402354 None:intergenic
GCTCCGAGACATTCTAATTT+TGG 0.163099 4_1:-83405317 Msa0578770:CDS
TGCTCTTTGCACTTACAATT+TGG 0.180770 4_1:-83405844 Msa0578770:CDS
ACCCTCTCGGCGTCGGATTC+CGG 0.187026 4_1:+83405381 None:intergenic
TTTGGTCTCTTGTGGCATTT+AGG 0.201887 4_1:-83404443 Msa0578770:intron
CATATGTACAGGTTTGTTTA+TGG 0.203036 4_1:-83403440 Msa0578770:intron
GTGACCACAGTGTCACATTT+TGG 0.210016 4_1:-83402479 Msa0578770:three_prime_UTR
ACTCCACCAAACTCTGTTTC+TGG 0.243996 4_1:+83404702 None:intergenic
ACAATAGAAGCAGCAGTTTC+AGG 0.257344 4_1:+83405593 None:intergenic
CCCTCTCGGCGTCGGATTCC+GGG 0.257869 4_1:+83405382 None:intergenic
ATGGCTGTTCGATTTCTTAC+AGG 0.260480 4_1:-83403367 Msa0578770:CDS
TCACCACGGGTTGCATTAAA+AGG 0.260823 4_1:+83402000 None:intergenic
TTTCCACATGCAATCATCTT+AGG 0.264461 4_1:+83403409 None:intergenic
ACCGCTGTTGCAGCTGGCGC+AGG 0.267633 4_1:+83405221 None:intergenic
AGTAATTCTTCTTCTTTAAC+TGG 0.268630 4_1:+83404663 None:intergenic
GCTGTGAACTCTCCGAAATT+TGG 0.269865 4_1:-83405194 Msa0578770:CDS
CCAGCCTCATTGGTCTAATT+TGG 0.276052 4_1:-83404461 Msa0578770:CDS
ATTACCCAACACTTTGGTTA+TGG 0.281307 4_1:-83405762 Msa0578770:CDS
TTAAATTTGACCTATTGATT+TGG 0.306746 4_1:-83402335 Msa0578770:three_prime_UTR
TCCGATGTTGTTTCGCTTGA+TGG 0.307846 4_1:-83405554 Msa0578770:CDS
AACATCGGAATCAACCTTAA+AGG 0.310000 4_1:+83405568 None:intergenic
CCAAACCCGGAATTCTCTTC+CGG 0.312568 4_1:-83405131 Msa0578770:CDS
CTCAACCCGGAAGAGAATTC+CGG 0.312908 4_1:+83405125 None:intergenic
CGTTAATTTCATACCTTTGT+TGG 0.314261 4_1:+83404791 None:intergenic
TCTTCGAAGTTTGACGGTCT+TGG 0.314319 4_1:+83405248 None:intergenic
TTCCAAGTTTCCCAAAATTT+GGG 0.316455 4_1:-83402365 Msa0578770:three_prime_UTR
GAACAATAGCTACACGTAAA+AGG 0.317468 4_1:+83403296 None:intergenic
TTACCCAACACTTTGGTTAT+GGG 0.317734 4_1:-83405761 Msa0578770:CDS
ATGTAGTAGACTAGAGTAAT+TGG 0.323819 4_1:+83402612 None:intergenic
GGGAGTATGCAAGCATTCTT+TGG 0.326368 4_1:-83402501 Msa0578770:three_prime_UTR
AGTTAAAGAAGAAGAATTAC+TGG 0.326836 4_1:-83404661 Msa0578770:CDS
TGAATATTCCGGTACCCTTA+TGG 0.333095 4_1:-83405711 Msa0578770:CDS
GGAATGGCTATGTTCAGTTT+AGG 0.344369 4_1:-83404189 Msa0578770:intron
CCCTGCGCCAGCTGCAACAG+CGG 0.347912 4_1:-83405222 Msa0578770:CDS
GCCTGCACCGCTGTTGCAGC+TGG 0.349760 4_1:+83405215 None:intergenic
ATGAGGCTGGAGTACGTGTT+TGG 0.350182 4_1:+83404474 None:intergenic
GAGACACAACAGAGGAAAAC+AGG 0.352248 4_1:-83402239 Msa0578770:three_prime_UTR
CTAGTCTACTACATATTACT+TGG 0.360308 4_1:-83402603 Msa0578770:CDS
TTGAGATAGGAGGGTAAAGT+TGG 0.360314 4_1:+83406147 None:intergenic
GCCGGATAAAATCCAAATTT+CGG 0.361171 4_1:+83405182 None:intergenic
TGGACTAATTTCACAGCTAA+TGG 0.361197 4_1:-83405824 Msa0578770:CDS
CCGGAAGAGAATTCCGGGTT+TGG 0.361318 4_1:+83405131 None:intergenic
TTTACGTGTAGCTATTGTTC+AGG 0.368472 4_1:-83403293 Msa0578770:intron
GCCAGCTGCAACAGCGGTGC+AGG 0.368848 4_1:-83405216 Msa0578770:CDS
TCAGAAAATCAAACGCTTCC+CGG 0.368913 4_1:-83405472 Msa0578770:CDS
GTGTACTTTCGTTTCTGTTA+AGG 0.371814 4_1:+83406239 None:intergenic
TGGAGTCGGCCCACGTGAAT+TGG 0.371998 4_1:+83405268 None:intergenic
TGCTATGAACCTATAGTTCA+TGG 0.375035 4_1:+83405892 None:intergenic
GGTAGTGGTGCTGCTGATTA+CGG 0.377116 4_1:-83404906 Msa0578770:CDS
CAAACCCGGAATTCTCTTCC+GGG 0.382809 4_1:-83405130 Msa0578770:CDS
GACTTGAAGCCCGCTGGCTT+CGG 0.385833 4_1:+83404932 None:intergenic
AACCTATAGTTCATGGCATA+AGG 0.386855 4_1:+83405899 None:intergenic
GTGTAGCTCCGCCGTTGAGC+TGG 0.387107 4_1:+83404584 None:intergenic
TAGTCCAGTCACAACTTAAC+TGG 0.390784 4_1:-83406209 Msa0578770:five_prime_UTR
ATACTGTCTGATGCTGGTCT+TGG 0.394410 4_1:-83404210 Msa0578770:CDS
AGGGTAAAGTTGGAAGAAAA+AGG 0.397293 4_1:+83406157 None:intergenic
AGCCCGCTGGCTTCGGATAC+CGG 0.401191 4_1:+83404939 None:intergenic
AATCTCTTTAGCACCTTGTT+CGG 0.402405 4_1:+83404860 None:intergenic
TGGAGTACGTGTTTGGGTTA+CGG 0.405705 4_1:+83404481 None:intergenic
TAACTGGTTCAGTTAATTAA+CGG 0.408756 4_1:-83406193 Msa0578770:five_prime_UTR
TCAACCCGGAAGAGAATTCC+GGG 0.410364 4_1:+83405126 None:intergenic
GTCTCATTCTGATCATGGTT+TGG 0.411195 4_1:-83404515 Msa0578770:CDS
AGAATTTGAGCCAAATCAAT+AGG 0.411948 4_1:+83402325 None:intergenic
TGGTTCTTCAGTGTATCATT+TGG 0.415072 4_1:-83405679 Msa0578770:CDS
AAGACCAGCATCAGACAGTA+TGG 0.415534 4_1:+83404212 None:intergenic
GAGAATTCCGGGTTTGGAGC+TGG 0.417175 4_1:+83405137 None:intergenic
TGCTAAAGAGATTAGAATGT+TGG 0.418993 4_1:-83404850 Msa0578770:CDS
CCGCTGTTGCAGCTGGCGCA+GGG 0.420973 4_1:+83405222 None:intergenic
GACCCGTCTCATTCTGATCA+TGG 0.423697 4_1:-83404520 Msa0578770:CDS
GCTATGTATGGTGAATATTC+CGG 0.424658 4_1:-83405722 Msa0578770:CDS
TTTATAGCTTGAGTTCTTCC+CGG 0.424860 4_1:-83405400 Msa0578770:CDS
TTGATTATGTCTTTGTAAGT+TGG 0.428805 4_1:+83402554 None:intergenic
TTGGTAACAGTAACACCATT+TGG 0.429685 4_1:+83404810 None:intergenic
TAGAAGATGAGGTAGAGAAA+GGG 0.433169 4_1:-83404638 Msa0578770:CDS
CGCCGGTATCCGAAGCCAGC+GGG 0.433380 4_1:-83404941 Msa0578770:CDS
TGAGGCTGGAGTACGTGTTT+GGG 0.435204 4_1:+83404475 None:intergenic
ACCCTTATGCCATGAACTAT+AGG 0.435554 4_1:-83405901 Msa0578770:CDS
TACTCCTTGGCAAACACAAA+TGG 0.437093 4_1:+83402798 None:intergenic
CTTGAGACTGATGCTGAGGT+TGG 0.438679 4_1:-83405521 Msa0578770:CDS
CCTAGCTTGTTCAGAGCAGC+TGG 0.440938 4_1:+83404612 None:intergenic
CTCAGTTGCTTCATTTGCCA+TGG 0.441201 4_1:-83403386 Msa0578770:CDS
AACACGTACTCCAGCCTCAT+TGG 0.443272 4_1:-83404471 Msa0578770:CDS
GTAGAAGATGAGGTAGAGAA+AGG 0.444020 4_1:-83404639 Msa0578770:CDS
GAACCACAACTTGAACCATA+AGG 0.450783 4_1:+83405696 None:intergenic
TACCCTTATGGTTCAAGTTG+TGG 0.453299 4_1:-83405699 Msa0578770:CDS
GCTGCAGCTTCCATTGCTGT+TGG 0.453666 4_1:-83403331 Msa0578770:CDS
TACGGATTTCTACTCTATGA+TGG 0.460158 4_1:-83405345 Msa0578770:CDS
GGGTTCTCTTCGAAGTTTGA+CGG 0.460671 4_1:+83405242 None:intergenic
AGAATTCCGGGTTTGGAGCT+GGG 0.465010 4_1:+83405138 None:intergenic
GCTATGCCAGAAACAGAGTT+TGG 0.465347 4_1:-83404708 Msa0578770:CDS
ATGTGTTTCACGGTGGCTGT+TGG 0.465776 4_1:+83404561 None:intergenic
GGCGGTGGAGTTGTTGAGAT+AGG 0.466466 4_1:+83406134 None:intergenic
TGGTCTAATTTGGTCTCTTG+TGG 0.467394 4_1:-83404451 Msa0578770:CDS
CCACTTCTCATAGCTATGTA+TGG 0.471301 4_1:-83405734 Msa0578770:CDS
AAATTAGACCCTCTCGGCGT+CGG 0.473693 4_1:+83405374 None:intergenic
TCTTACAGGTCCTGCAGTCA+TGG 0.474564 4_1:-83403353 Msa0578770:CDS
AGAAGATGAGGTAGAGAAAG+GGG 0.475046 4_1:-83404637 Msa0578770:CDS
CATCCAGCCATTCTCAGTAC+AGG 0.478822 4_1:-83402768 Msa0578770:CDS
AAAATCATGGCTACGTAAAG+TGG 0.485356 4_1:+83406043 None:intergenic
CCATTGTTAGTAACTGTTTG+TGG 0.486279 4_1:+83405032 None:intergenic
AGCCGGAGGCATGTGTTTCA+CGG 0.488774 4_1:+83404551 None:intergenic
ACCTATAGTTCATGGCATAA+GGG 0.489456 4_1:+83405900 None:intergenic
GCCAGCGGGCTTCAAGTCTT+CGG 0.489637 4_1:-83404927 Msa0578770:CDS
TACCCTGTACTGAGAATGGC+TGG 0.489891 4_1:+83402765 None:intergenic
TGTGTTTCACGGTGGCTGTT+GGG 0.490533 4_1:+83404562 None:intergenic
AACTGTGTAGAGATCGTGCC+AGG 0.494115 4_1:+83406081 None:intergenic
TACGGAGCGTCTGATCAATC+TGG 0.494664 4_1:-83404888 Msa0578770:CDS
TTCTCACCGGACCAATGCTC+CGG 0.496572 4_1:-83405989 Msa0578770:CDS
GAGTCATCATAAAAGATCTC+CGG 0.496982 4_1:+83405453 None:intergenic
ATTCCCATAACCAAAGTGTT+GGG 0.498180 4_1:+83405758 None:intergenic
AGTTAAGTTGTGACTGGACT+AGG 0.500941 4_1:+83406211 None:intergenic
AACGGTTTATGCCGGAGCAT+TGG 0.504476 4_1:+83405978 None:intergenic
GGGCTTCAAGTCTTCGGTAG+TGG 0.505488 4_1:-83404921 Msa0578770:CDS
AGAATTACTGGTAGAAGATG+AGG 0.507214 4_1:-83404649 Msa0578770:CDS
CTGCGAAAATCGCGACGAAA+CGG 0.508205 4_1:+83405960 None:intergenic
CCCGGAATCCGACGCCGAGA+GGG 0.510089 4_1:-83405382 Msa0578770:CDS
ATCTCCATACTGTCTGATGC+TGG 0.512641 4_1:-83404216 Msa0578770:CDS
CCTTCATCAAAATGATAACC+TGG 0.515680 4_1:-83406099 Msa0578770:exon
TTCAACATTACCCAACACTT+TGG 0.515765 4_1:-83405768 Msa0578770:CDS
AACCACAACTTGAACCATAA+GGG 0.517091 4_1:+83405697 None:intergenic
CAATTACCCTGTACTGAGAA+TGG 0.517178 4_1:+83402761 None:intergenic
TGTTCCATTTGTGTTTGCCA+AGG 0.518124 4_1:-83402802 Msa0578770:CDS
GAGTACTAGGGGTTCACCAC+GGG 0.518446 4_1:+83401987 None:intergenic
AAGTTTGACGGTCTTGGAGT+CGG 0.519783 4_1:+83405254 None:intergenic
CCAAATTAGACCAATGAGGC+TGG 0.520634 4_1:+83404461 None:intergenic
CCGGTGAGATTCGACGGCCG+TGG 0.521431 4_1:+83405431 None:intergenic
CACCGTGAAACACATGCCTC+CGG 0.528606 4_1:-83404553 Msa0578770:CDS
GTGGAGCTCTAGTGCCTCGC+CGG 0.529135 4_1:-83404958 Msa0578770:CDS
TTTGGAGCTGGGTAAGCTGC+CGG 0.532074 4_1:+83405149 None:intergenic
TTTATGCCGGAGCATTGGTC+CGG 0.532539 4_1:+83405983 None:intergenic
GTCTGATGCTGGTCTTGGAA+TGG 0.532632 4_1:-83404205 Msa0578770:CDS
TCTGATGACCATCCACCAAA+TGG 0.532819 4_1:-83404825 Msa0578770:CDS
GGTGGAGTTGTTGAGATAGG+AGG 0.533189 4_1:+83406137 None:intergenic
CAATCTGGACGCTCCGAACA+AGG 0.534737 4_1:-83404873 Msa0578770:CDS
AGCTTACCCAGCTCCAAACC+CGG 0.535808 4_1:-83405144 Msa0578770:CDS
CCACCACCGTACGGAGCCAT+AGG 0.539416 4_1:+83406018 None:intergenic
ACTTACAAAGACATAATCAA+TGG 0.541553 4_1:-83402551 Msa0578770:three_prime_UTR
CATGGCATAAGGGTTATTTG+TGG 0.541794 4_1:+83405910 None:intergenic
CCTATGGCTCCGTACGGTGG+TGG 0.543458 4_1:-83406018 Msa0578770:CDS
CGCGACGAAACGGTTTATGC+CGG 0.546741 4_1:+83405970 None:intergenic
GATGCTGAGGTTGGTGATGA+TGG 0.546837 4_1:-83405512 Msa0578770:CDS
GAAGCTGCAGCCATGACTGC+AGG 0.547059 4_1:+83403343 None:intergenic
TGAACCAGTTAAGTTGTGAC+TGG 0.547702 4_1:+83406205 None:intergenic
TGTGAAGCTCTTTAGCATCA+TGG 0.550496 4_1:+83404988 None:intergenic
AATTCCCATAACCAAAGTGT+TGG 0.554129 4_1:+83405757 None:intergenic
AACTTGAACCATAAGGGTAC+CGG 0.554608 4_1:+83405703 None:intergenic
ACCGAAGACTTGAAGCCCGC+TGG 0.555211 4_1:+83404926 None:intergenic
TCCATTGCTGTTGGACTGCG+TGG 0.555322 4_1:-83403322 Msa0578770:CDS
AACCATGATCAGAATGAGAC+GGG 0.555654 4_1:+83404518 None:intergenic
CAAGCTATAAATCTCTGCTC+CGG 0.557565 4_1:+83405412 None:intergenic
AAATAGGCTGCACTTCCTCA+AGG 0.557695 4_1:-83402828 Msa0578770:intron
GTGGAGTTGTTGAGATAGGA+GGG 0.559354 4_1:+83406138 None:intergenic
TGGATGGACATTGTACTCCT+TGG 0.559828 4_1:+83402785 None:intergenic
TTTGGATTGTGCTATTAGCA+AGG 0.560062 4_1:-83402461 Msa0578770:three_prime_UTR
AGACACAACAGAGGAAAACA+GGG 0.563756 4_1:-83402238 Msa0578770:three_prime_UTR
CCAGCTGCTCTGAACAAGCT+AGG 0.564553 4_1:-83404612 Msa0578770:CDS
TCCGTTCAGTCCAATTCACG+TGG 0.565363 4_1:-83405278 Msa0578770:CDS
GCACCAAAATTAGAATGTCT+CGG 0.565935 4_1:+83405314 None:intergenic
ACGGATTTCTACTCTATGAT+GGG 0.566049 4_1:-83405344 Msa0578770:CDS
ATGAAATGAAAGGATAGAAG+AGG 0.566566 4_1:+83405935 None:intergenic
GTAACAGTAACACCATTTGG+TGG 0.569554 4_1:+83404813 None:intergenic
CCATACATAGCTATGAGAAG+TGG 0.569788 4_1:+83405734 None:intergenic
TTATCCGGCACAAAATGTGC+CGG 0.572329 4_1:-83405168 Msa0578770:CDS
GAAAATTGTGTCAGTGTGCA+TGG 0.575343 4_1:+83402300 None:intergenic
CAGCTAATGGTAGCTTAGAG+TGG 0.576924 4_1:-83405811 Msa0578770:CDS
GCCACGCAGTCCAACAGCAA+TGG 0.580054 4_1:+83403321 None:intergenic
ATTTGTGGAGATGAAATGAA+AGG 0.580978 4_1:+83405925 None:intergenic
CAGTAACACCATTTGGTGGA+TGG 0.582761 4_1:+83404817 None:intergenic
GGTGTTACTGTTACCAACAA+AGG 0.585850 4_1:-83404804 Msa0578770:intron
AGTCATCATAAAAGATCTCC+GGG 0.587281 4_1:+83405454 None:intergenic
AGACGGGTCATAACACTAGC+CGG 0.587491 4_1:+83404534 None:intergenic
CCACAAACAGTTACTAACAA+TGG 0.587706 4_1:-83405032 Msa0578770:CDS
TCGCCGGTATCCGAAGCCAG+CGG 0.592686 4_1:-83404942 Msa0578770:CDS
TCCCGGAATCCGACGCCGAG+AGG 0.593159 4_1:-83405383 Msa0578770:CDS
TGTATTTAGTGAGAAAACAA+AGG 0.595779 4_1:-83402090 Msa0578770:three_prime_UTR
CCACGGCCGTCGAATCTCAC+CGG 0.596417 4_1:-83405431 Msa0578770:CDS
ATGCCAGAAACAGAGTTTGG+TGG 0.599636 4_1:-83404705 Msa0578770:CDS
CTGTACTGAGAATGGCTGGA+TGG 0.602129 4_1:+83402769 None:intergenic
TCCATCAAGCGAAACAACAT+CGG 0.608873 4_1:+83405553 None:intergenic
TGATTAAAATTAGACCCTCT+CGG 0.610851 4_1:+83405368 None:intergenic
CCCACGTGAATTGGACTGAA+CGG 0.612758 4_1:+83405277 None:intergenic
AAGAGCTTCACATGTTTGTG+TGG 0.615015 4_1:-83404977 Msa0578770:CDS
AATAGGCTGCACTTCCTCAA+GGG 0.617237 4_1:-83402827 Msa0578770:intron
AAACCATGATCAGAATGAGA+CGG 0.622385 4_1:+83404517 None:intergenic
ACTTACACTCTTGCTCAACC+CGG 0.624193 4_1:+83405112 None:intergenic
GTTGTGACTGGACTAGGAGA+GGG 0.625409 4_1:+83406217 None:intergenic
GGAGCCATAGGCTAAAATCA+TGG 0.627873 4_1:+83406030 None:intergenic
TGTAAGAAATCGAACAGCCA+TGG 0.628792 4_1:+83403369 None:intergenic
CAACCTAAGATGATTGCATG+TGG 0.629664 4_1:-83403412 Msa0578770:CDS
TAGCCTATGGCTCCGTACGG+TGG 0.633812 4_1:-83406021 Msa0578770:CDS
GTGGTGGAAAATATTCTCAC+CGG 0.633995 4_1:-83406002 Msa0578770:CDS
AGTTGTGACTGGACTAGGAG+AGG 0.639175 4_1:+83406216 None:intergenic
ATCCAGCCATTCTCAGTACA+GGG 0.640144 4_1:-83402767 Msa0578770:intron
AGGAGGATCCAGCTCAACGG+CGG 0.640290 4_1:-83404592 Msa0578770:CDS
TCTGCTCCGGTGAGATTCGA+CGG 0.650821 4_1:+83405425 None:intergenic
GACGGAGAGAGAATTTACAA+AGG 0.651237 4_1:+83406364 None:intergenic
GCTAGGAGGATCCAGCTCAA+CGG 0.658037 4_1:-83404595 Msa0578770:CDS
TGAGTACTAGGGGTTCACCA+CGG 0.662808 4_1:+83401986 None:intergenic
AGGGACGGAGTGAGTACTAG+GGG 0.668111 4_1:+83401976 None:intergenic
GCTGGCTTCGGATACCGGCG+AGG 0.674655 4_1:+83404944 None:intergenic
GACACAACAGAGGAAAACAG+GGG 0.675597 4_1:-83402237 Msa0578770:three_prime_UTR
GCTGCTCTGAACAAGCTAGG+AGG 0.688577 4_1:-83404609 Msa0578770:CDS
ACAAATGGAACAATCCCTTG+AGG 0.689122 4_1:+83402813 None:intergenic
CCGTTCAGTCCAATTCACGT+GGG 0.693338 4_1:-83405277 Msa0578770:CDS
GAGACCAAATTAGACCAATG+AGG 0.693897 4_1:+83404457 None:intergenic
TACGTAAAGTGGAACTACTG+CGG 0.698065 4_1:+83406054 None:intergenic
CGGAGGCATGTGTTTCACGG+TGG 0.715970 4_1:+83404554 None:intergenic
GCATATGAGAGACACAACAG+AGG 0.730420 4_1:-83402247 Msa0578770:three_prime_UTR
CGGGTCATAACACTAGCCGG+AGG 0.735658 4_1:+83404537 None:intergenic
CAATCCAAAATGTGACACTG+TGG 0.775534 4_1:+83402475 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTGTTTAAACTAAAA+TGG - chr4_1:83405283-83405302 Msa0578770:CDS 10.0%
!! ATCATTATTACAAAATTTAT+GGG + chr4_1:83405444-83405463 None:intergenic 10.0%
!! AATCATTATTACAAAATTTA+TGG + chr4_1:83405445-83405464 None:intergenic 10.0%
!!! TGATTATTAATTTTGATTGT+AGG - chr4_1:83404109-83404128 Msa0578770:intron 15.0%
!!! ATTGATTTCTCTATTATTTT+AGG + chr4_1:83404150-83404169 None:intergenic 15.0%
!!! TTAGAAAATATAATGGAAAT+GGG + chr4_1:83404329-83404348 None:intergenic 15.0%
!!! ATTAGAAAATATAATGGAAA+TGG + chr4_1:83404330-83404349 None:intergenic 15.0%
!!! AATTTTCCATTTAAGAAAAA+GGG + chr4_1:83405714-83405733 None:intergenic 15.0%
!!! AAATTTTCCATTTAAGAAAA+AGG + chr4_1:83405715-83405734 None:intergenic 15.0%
!!! TTTTGAATCTTTTATACTTT+GGG - chr4_1:83405863-83405882 Msa0578770:CDS 15.0%
!! AATAGAAAAACAATAAACAA+TGG + chr4_1:83406228-83406247 None:intergenic 15.0%
!!! ACTTAAATTAATCGATTTTG+CGG + chr4_1:83403999-83404018 None:intergenic 20.0%
!!! GTAGAGTTTTTATATAAGTT+TGG - chr4_1:83404081-83404100 Msa0578770:intron 20.0%
!!! TTATTAATTTTGATTGTAGG+TGG - chr4_1:83404112-83404131 Msa0578770:intron 20.0%
!! AAGAATGAAATTATTGTAGA+AGG + chr4_1:83404250-83404269 None:intergenic 20.0%
!!! TTTTAATTCTTGTACCATAT+TGG - chr4_1:83404890-83404909 Msa0578770:CDS 20.0%
!! AGTTCAATACATATAATACT+TGG - chr4_1:83405381-83405400 Msa0578770:CDS 20.0%
!! GTTCAATACATATAATACTT+GGG - chr4_1:83405382-83405401 Msa0578770:CDS 20.0%
!!! AAATGTAATTTGCTGAAAAT+AGG - chr4_1:83405540-83405559 Msa0578770:CDS 20.0%
!!! ATTTTCCATTTAAGAAAAAG+GGG + chr4_1:83405713-83405732 None:intergenic 20.0%
!!! AAATGGAAAATTTTCATTTC+AGG - chr4_1:83405722-83405741 Msa0578770:CDS 20.0%
!!! AATGGAAAATTTTCATTTCA+GGG - chr4_1:83405723-83405742 Msa0578770:CDS 20.0%
!!! CTTTTGAATCTTTTATACTT+TGG - chr4_1:83405862-83405881 Msa0578770:CDS 20.0%
!!! CTTCACTGTTTTTTTTTTTA+AGG + chr4_1:83405995-83406014 None:intergenic 20.0%
!!! TTAAATTTGACCTATTGATT+TGG - chr4_1:83406049-83406068 Msa0578770:CDS 20.0%
!! TAACTGGTTCAGTTAATTAA+CGG - chr4_1:83402191-83402210 Msa0578770:three_prime_UTR 25.0%
!!! AGGGTCTAATTTTAATCATA+CGG - chr4_1:83403021-83403040 Msa0578770:intron 25.0%
! AGTAATTCTTCTTCTTTAAC+TGG + chr4_1:83403724-83403743 None:intergenic 25.0%
! AGTTAAAGAAGAAGAATTAC+TGG - chr4_1:83403723-83403742 Msa0578770:intron 25.0%
! AATGAAATTATTGTAGAAGG+AGG + chr4_1:83404247-83404266 None:intergenic 25.0%
! TGTTTAATGTAAAAGAGGAA+AGG + chr4_1:83404289-83404308 None:intergenic 25.0%
! AATGGTGTTTAATGTAAAAG+AGG + chr4_1:83404294-83404313 None:intergenic 25.0%
!!! GAAACACATGTCAATTTTTT+TGG + chr4_1:83404359-83404378 None:intergenic 25.0%
! ACAATCACAAAACAATGAAT+AGG - chr4_1:83404485-83404504 Msa0578770:CDS 25.0%
! CAATCACAAAACAATGAATA+GGG - chr4_1:83404486-83404505 Msa0578770:CDS 25.0%
! TATAGATTTGAGGAAAAGAA+AGG - chr4_1:83404575-83404594 Msa0578770:CDS 25.0%
! AGTAACAAACTCCAAAATAA+TGG + chr4_1:83404618-83404637 None:intergenic 25.0%
!! ACTATTTTGCAACCAAAATT+TGG - chr4_1:83404765-83404784 Msa0578770:intron 25.0%
!! ATTAGACATTTGCCAAATTT+TGG + chr4_1:83404780-83404799 None:intergenic 25.0%
! AATGTCTAATTTCACTAATC+AGG - chr4_1:83404790-83404809 Msa0578770:intron 25.0%
! AATCAGGAAAAACTTCAAAA+CGG - chr4_1:83404806-83404825 Msa0578770:CDS 25.0%
! TGTACCATATTGGATAAAAA+TGG - chr4_1:83404900-83404919 Msa0578770:CDS 25.0%
!!! TATCATGTTGGTTTTAACAA+AGG - chr4_1:83405140-83405159 Msa0578770:CDS 25.0%
!! ATTAACCCCTTTTTCTTAAA+TGG - chr4_1:83405705-83405724 Msa0578770:CDS 25.0%
!!! TTTCATTTCAGGGTTATTTT+TGG - chr4_1:83405733-83405752 Msa0578770:CDS 25.0%
!!! TTCATTTCAGGGTTATTTTT+GGG - chr4_1:83405734-83405753 Msa0578770:CDS 25.0%
! TTGATTATGTCTTTGTAAGT+TGG + chr4_1:83405833-83405852 None:intergenic 25.0%
! ACTTACAAAGACATAATCAA+TGG - chr4_1:83405833-83405852 Msa0578770:CDS 25.0%
!!! TTTTTTTTAAGGATTCTAGC+TGG + chr4_1:83405984-83406003 None:intergenic 25.0%
!! TAATGAAGTTCCCAAATTTT+GGG + chr4_1:83406032-83406051 None:intergenic 25.0%
!! TTAATGAAGTTCCCAAATTT+TGG + chr4_1:83406033-83406052 None:intergenic 25.0%
! TGTATTTAGTGAGAAAACAA+AGG - chr4_1:83406294-83406313 Msa0578770:five_prime_UTR 25.0%
!! TCATTTTGATGAAGGCTTTT+TGG + chr4_1:83402280-83402299 None:intergenic 30.0%
ATGAAATGAAAGGATAGAAG+AGG + chr4_1:83402452-83402471 None:intergenic 30.0%
ATTTGTGGAGATGAAATGAA+AGG + chr4_1:83402462-83402481 None:intergenic 30.0%
TGCTTCTATTGTTTCCTTTA+AGG - chr4_1:83402802-83402821 Msa0578770:CDS 30.0%
TGATTAAAATTAGACCCTCT+CGG + chr4_1:83403019-83403038 None:intergenic 30.0%
! TCCGAAATTTGGATTTTATC+CGG - chr4_1:83403201-83403220 Msa0578770:intron 30.0%
TGCTAAAGAGATTAGAATGT+TGG - chr4_1:83403534-83403553 Msa0578770:intron 30.0%
CGTTAATTTCATACCTTTGT+TGG + chr4_1:83403596-83403615 None:intergenic 30.0%
TTATTGTAGAAGGAGGAATT+TGG + chr4_1:83404240-83404259 None:intergenic 30.0%
! AAATATAATGGAAATGGGAG+TGG + chr4_1:83404324-83404343 None:intergenic 30.0%
AAACAATGAATAGGGTACAA+TGG - chr4_1:83404494-83404513 Msa0578770:CDS 30.0%
CAATGGGAATTATAGATTTG+AGG - chr4_1:83404565-83404584 Msa0578770:CDS 30.0%
GAAAAGAAAGGAAGTAACTA+AGG - chr4_1:83404587-83404606 Msa0578770:CDS 30.0%
GATAACGTGAATGTAAATTG+TGG - chr4_1:83404848-83404867 Msa0578770:CDS 30.0%
ACCATATTGGATAAAAATGG+AGG - chr4_1:83404903-83404922 Msa0578770:CDS 30.0%
!! TCCTCCATTTTTATCCAATA+TGG + chr4_1:83404907-83404926 None:intergenic 30.0%
!!! TGTTTTGTTTGCATATGTAC+AGG - chr4_1:83404933-83404952 Msa0578770:CDS 30.0%
! CATATGTACAGGTTTGTTTA+TGG - chr4_1:83404944-83404963 Msa0578770:CDS 30.0%
TTAAAACCAACATGATAGAG+TGG + chr4_1:83405137-83405156 None:intergenic 30.0%
!!! ACTTATTTTTTAAACCGTCG+CGG + chr4_1:83405262-83405281 None:intergenic 30.0%
ATGTAGTAGACTAGAGTAAT+TGG + chr4_1:83405775-83405794 None:intergenic 30.0%
CTAGTCTACTACATATTACT+TGG - chr4_1:83405781-83405800 Msa0578770:CDS 30.0%
TTCCAAGTTTCCCAAAATTT+GGG - chr4_1:83406019-83406038 Msa0578770:CDS 30.0%
AGAATTTGAGCCAAATCAAT+AGG + chr4_1:83406062-83406081 None:intergenic 30.0%
!! ATTTTCAAGAGCTGAGAAAA+AGG - chr4_1:83406101-83406120 Msa0578770:exon 30.0%
GTGTACTTTCGTTTCTGTTA+AGG + chr4_1:83402148-83402167 None:intergenic 35.0%
AGGGTAAAGTTGGAAGAAAA+AGG + chr4_1:83402230-83402249 None:intergenic 35.0%
!! TGATGAAGGCTTTTTGGTAA+TGG + chr4_1:83402274-83402293 None:intergenic 35.0%
!! CCAGGTTATCATTTTGATGA+AGG + chr4_1:83402288-83402307 None:intergenic 35.0%
CCTTCATCAAAATGATAACC+TGG - chr4_1:83402285-83402304 Msa0578770:three_prime_UTR 35.0%
AAAATCATGGCTACGTAAAG+TGG + chr4_1:83402344-83402363 None:intergenic 35.0%
ACCTATAGTTCATGGCATAA+GGG + chr4_1:83402487-83402506 None:intergenic 35.0%
AACCTATAGTTCATGGCATA+AGG + chr4_1:83402488-83402507 None:intergenic 35.0%
TGCTATGAACCTATAGTTCA+TGG + chr4_1:83402495-83402514 None:intergenic 35.0%
TGCTCTTTGCACTTACAATT+TGG - chr4_1:83402540-83402559 Msa0578770:three_prime_UTR 35.0%
TGGACTAATTTCACAGCTAA+TGG - chr4_1:83402560-83402579 Msa0578770:three_prime_UTR 35.0%
TTCAACATTACCCAACACTT+TGG - chr4_1:83402616-83402635 Msa0578770:CDS 35.0%
ATTACCCAACACTTTGGTTA+TGG - chr4_1:83402622-83402641 Msa0578770:CDS 35.0%
TTACCCAACACTTTGGTTAT+GGG - chr4_1:83402623-83402642 Msa0578770:CDS 35.0%
! ATTCCCATAACCAAAGTGTT+GGG + chr4_1:83402629-83402648 None:intergenic 35.0%
AATTCCCATAACCAAAGTGT+TGG + chr4_1:83402630-83402649 None:intergenic 35.0%
GCTATGTATGGTGAATATTC+CGG - chr4_1:83402662-83402681 Msa0578770:intron 35.0%
AACCACAACTTGAACCATAA+GGG + chr4_1:83402690-83402709 None:intergenic 35.0%
TGGTTCTTCAGTGTATCATT+TGG - chr4_1:83402705-83402724 Msa0578770:intron 35.0%
!!! TTGTTTTTGTTCGAGTATCG+TGG - chr4_1:83402740-83402759 Msa0578770:intron 35.0%
!! TGGTGCTAAGCTTTTGATTA+TGG - chr4_1:83402760-83402779 Msa0578770:intron 35.0%
AACATCGGAATCAACCTTAA+AGG + chr4_1:83402819-83402838 None:intergenic 35.0%
AGTCATCATAAAAGATCTCC+GGG + chr4_1:83402933-83402952 None:intergenic 35.0%
GAGTCATCATAAAAGATCTC+CGG + chr4_1:83402934-83402953 None:intergenic 35.0%
! GATCTTTTATGATGACTCCA+CGG - chr4_1:83402936-83402955 Msa0578770:intron 35.0%
TTTATAGCTTGAGTTCTTCC+CGG - chr4_1:83402984-83403003 Msa0578770:intron 35.0%
TACGGATTTCTACTCTATGA+TGG - chr4_1:83403039-83403058 Msa0578770:intron 35.0%
ACGGATTTCTACTCTATGAT+GGG - chr4_1:83403040-83403059 Msa0578770:intron 35.0%
GCACCAAAATTAGAATGTCT+CGG + chr4_1:83403073-83403092 None:intergenic 35.0%
GCCGGATAAAATCCAAATTT+CGG + chr4_1:83403205-83403224 None:intergenic 35.0%
CCATTGTTAGTAACTGTTTG+TGG + chr4_1:83403355-83403374 None:intergenic 35.0%
CCACAAACAGTTACTAACAA+TGG - chr4_1:83403352-83403371 Msa0578770:CDS 35.0%
AATCTCTTTAGCACCTTGTT+CGG + chr4_1:83403527-83403546 None:intergenic 35.0%
! TTGGTAACAGTAACACCATT+TGG + chr4_1:83403577-83403596 None:intergenic 35.0%
AGAATTACTGGTAGAAGATG+AGG - chr4_1:83403735-83403754 Msa0578770:intron 35.0%
TAGAAGATGAGGTAGAGAAA+GGG - chr4_1:83403746-83403765 Msa0578770:intron 35.0%
AAACCATGATCAGAATGAGA+CGG + chr4_1:83403870-83403889 None:intergenic 35.0%
AGGAAAGGAATTGCAAAGAA+AGG + chr4_1:83404274-83404293 None:intergenic 35.0%
GAATGAATGTGATGGTAACA+TGG - chr4_1:83404522-83404541 Msa0578770:CDS 35.0%
TGGTATGATGAGACTATCTA+TGG - chr4_1:83404542-83404561 Msa0578770:CDS 35.0%
ATGAGACTATCTATGGCAAT+GGG - chr4_1:83404549-83404568 Msa0578770:CDS 35.0%
ACGTTATTGTTCAGCAAACA+TGG + chr4_1:83404663-83404682 None:intergenic 35.0%
! ATGTTTGCTGAACAATAACG+TGG - chr4_1:83404662-83404681 Msa0578770:CDS 35.0%
! TGTTTGCTGAACAATAACGT+GGG - chr4_1:83404663-83404682 Msa0578770:CDS 35.0%
TTTCCACATGCAATCATCTT+AGG + chr4_1:83404978-83404997 None:intergenic 35.0%
GAACAATAGCTACACGTAAA+AGG + chr4_1:83405091-83405110 None:intergenic 35.0%
TTTACGTGTAGCTATTGTTC+AGG - chr4_1:83405091-83405110 Msa0578770:CDS 35.0%
TGATTTCCACTCTATCATGT+TGG - chr4_1:83405128-83405147 Msa0578770:CDS 35.0%
AATGGTTGAGCTTGAGATAT+CGG - chr4_1:83405301-83405320 Msa0578770:CDS 35.0%
! TTTGGATTGTGCTATTAGCA+AGG - chr4_1:83405923-83405942 Msa0578770:CDS 35.0%
! AGCAAGGATGATGATTTTTC+TGG - chr4_1:83405939-83405958 Msa0578770:CDS 35.0%
!! CAAATTTTGGGAAACTTGGA+AGG + chr4_1:83406020-83406039 None:intergenic 35.0%
CTTCCAAGTTTCCCAAAATT+TGG - chr4_1:83406018-83406037 Msa0578770:CDS 35.0%
!! TTCCCAAATTTTGGGAAACT+TGG + chr4_1:83406024-83406043 None:intergenic 35.0%
GACGGAGAGAGAATTTACAA+AGG + chr4_1:83402023-83402042 None:intergenic 40.0%
! AGTTAAGTTGTGACTGGACT+AGG + chr4_1:83402176-83402195 None:intergenic 40.0%
TAGTCCAGTCACAACTTAAC+TGG - chr4_1:83402175-83402194 Msa0578770:three_prime_UTR 40.0%
! TGAACCAGTTAAGTTGTGAC+TGG + chr4_1:83402182-83402201 None:intergenic 40.0%
TTGAGATAGGAGGGTAAAGT+TGG + chr4_1:83402240-83402259 None:intergenic 40.0%
!!! TGAAGGCTTTTTGGTAATGG+CGG + chr4_1:83402271-83402290 None:intergenic 40.0%
TACGTAAAGTGGAACTACTG+CGG + chr4_1:83402333-83402352 None:intergenic 40.0%
!! GTAGCCATGATTTTAGCCTA+TGG - chr4_1:83402350-83402369 Msa0578770:three_prime_UTR 40.0%
! GAATATTTTCCACCACCGTA+CGG + chr4_1:83402378-83402397 None:intergenic 40.0%
! GTGGTGGAAAATATTCTCAC+CGG - chr4_1:83402382-83402401 Msa0578770:three_prime_UTR 40.0%
CATGGCATAAGGGTTATTTG+TGG + chr4_1:83402477-83402496 None:intergenic 40.0%
ACCCTTATGCCATGAACTAT+AGG - chr4_1:83402483-83402502 Msa0578770:three_prime_UTR 40.0%
CCATACATAGCTATGAGAAG+TGG + chr4_1:83402653-83402672 None:intergenic 40.0%
CCACTTCTCATAGCTATGTA+TGG - chr4_1:83402650-83402669 Msa0578770:intron 40.0%
TGAATATTCCGGTACCCTTA+TGG - chr4_1:83402673-83402692 Msa0578770:intron 40.0%
! AACTTGAACCATAAGGGTAC+CGG + chr4_1:83402684-83402703 None:intergenic 40.0%
!! TACCCTTATGGTTCAAGTTG+TGG - chr4_1:83402685-83402704 Msa0578770:intron 40.0%
GAACCACAACTTGAACCATA+AGG + chr4_1:83402691-83402710 None:intergenic 40.0%
ACAATAGAAGCAGCAGTTTC+AGG + chr4_1:83402794-83402813 None:intergenic 40.0%
TCCATCAAGCGAAACAACAT+CGG + chr4_1:83402834-83402853 None:intergenic 40.0%
! TTTTCTTGAGACTGATGCTG+AGG - chr4_1:83402859-83402878 Msa0578770:intron 40.0%
TCAGAAAATCAAACGCTTCC+CGG - chr4_1:83402912-83402931 Msa0578770:intron 40.0%
CAAGCTATAAATCTCTGCTC+CGG + chr4_1:83402975-83402994 None:intergenic 40.0%
! GCTCCGAGACATTCTAATTT+TGG - chr4_1:83403067-83403086 Msa0578770:intron 40.0%
TGTGAAGCTCTTTAGCATCA+TGG + chr4_1:83403399-83403418 None:intergenic 40.0%
AAGAGCTTCACATGTTTGTG+TGG - chr4_1:83403407-83403426 Msa0578770:CDS 40.0%
GTAACAGTAACACCATTTGG+TGG + chr4_1:83403574-83403593 None:intergenic 40.0%
!! GGTGTTACTGTTACCAACAA+AGG - chr4_1:83403580-83403599 Msa0578770:intron 40.0%
GTAGAAGATGAGGTAGAGAA+AGG - chr4_1:83403745-83403764 Msa0578770:intron 40.0%
AGAAGATGAGGTAGAGAAAG+GGG - chr4_1:83403747-83403766 Msa0578770:intron 40.0%
AACCATGATCAGAATGAGAC+GGG + chr4_1:83403869-83403888 None:intergenic 40.0%
GTCTCATTCTGATCATGGTT+TGG - chr4_1:83403869-83403888 Msa0578770:intron 40.0%
GAGACCAAATTAGACCAATG+AGG + chr4_1:83403930-83403949 None:intergenic 40.0%
TGGTCTAATTTGGTCTCTTG+TGG - chr4_1:83403933-83403952 Msa0578770:intron 40.0%
TTTGGTCTCTTGTGGCATTT+AGG - chr4_1:83403941-83403960 Msa0578770:intron 40.0%
GGAATGGCTATGTTCAGTTT+AGG - chr4_1:83404195-83404214 Msa0578770:CDS 40.0%
AATGGGAGTGGAAGCAATAA+TGG + chr4_1:83404312-83404331 None:intergenic 40.0%
GATGAGACTATCTATGGCAA+TGG - chr4_1:83404548-83404567 Msa0578770:CDS 40.0%
!!! CTAAGGAGCGTCCATTATTT+TGG - chr4_1:83404604-83404623 Msa0578770:CDS 40.0%
! GTTTGCTGAACAATAACGTG+GGG - chr4_1:83404664-83404683 Msa0578770:CDS 40.0%
AAATATCAGACCCCACATGT+CGG + chr4_1:83404715-83404734 None:intergenic 40.0%
!! TGTGGGGTCTGATATTTTAG+CGG - chr4_1:83404718-83404737 Msa0578770:intron 40.0%
CAACCTAAGATGATTGCATG+TGG - chr4_1:83404972-83404991 Msa0578770:CDS 40.0%
TGTAAGAAATCGAACAGCCA+TGG + chr4_1:83405018-83405037 None:intergenic 40.0%
ATGGCTGTTCGATTTCTTAC+AGG - chr4_1:83405017-83405036 Msa0578770:CDS 40.0%
TACACATGAATCAGCATTCC+CGG - chr4_1:83405199-83405218 Msa0578770:CDS 40.0%
CTGCAAGTATTTACACAGTC+AGG - chr4_1:83405232-83405251 Msa0578770:CDS 40.0%
GTATTCATGCACTCAGTGAT+CGG + chr4_1:83405334-83405353 None:intergenic 40.0%
TATTGAACTCAGAATCCCTG+TGG + chr4_1:83405370-83405389 None:intergenic 40.0%
ACAAATGGAACAATCCCTTG+AGG + chr4_1:83405574-83405593 None:intergenic 40.0%
TGTTCCATTTGTGTTTGCCA+AGG - chr4_1:83405582-83405601 Msa0578770:CDS 40.0%
TACTCCTTGGCAAACACAAA+TGG + chr4_1:83405589-83405608 None:intergenic 40.0%
CAATTACCCTGTACTGAGAA+TGG + chr4_1:83405626-83405645 None:intergenic 40.0%
CAATCCAAAATGTGACACTG+TGG + chr4_1:83405912-83405931 None:intergenic 40.0%
GAAAATTGTGTCAGTGTGCA+TGG + chr4_1:83406087-83406106 None:intergenic 40.0%
AGACACAACAGAGGAAAACA+GGG - chr4_1:83406146-83406165 Msa0578770:five_prime_UTR 40.0%
GTGGAGTTGTTGAGATAGGA+GGG + chr4_1:83402249-83402268 None:intergenic 45.0%
GGAGCCATAGGCTAAAATCA+TGG + chr4_1:83402357-83402376 None:intergenic 45.0%
! TTTTAGCCTATGGCTCCGTA+CGG - chr4_1:83402360-83402379 Msa0578770:three_prime_UTR 45.0%
CAGCTAATGGTAGCTTAGAG+TGG - chr4_1:83402573-83402592 Msa0578770:three_prime_UTR 45.0%
!! TCCGATGTTGTTTCGCTTGA+TGG - chr4_1:83402830-83402849 Msa0578770:intron 45.0%
AAGTTTGACGGTCTTGGAGT+CGG + chr4_1:83403133-83403152 None:intergenic 45.0%
TCTTCGAAGTTTGACGGTCT+TGG + chr4_1:83403139-83403158 None:intergenic 45.0%
GGGTTCTCTTCGAAGTTTGA+CGG + chr4_1:83403145-83403164 None:intergenic 45.0%
GCTGTGAACTCTCCGAAATT+TGG - chr4_1:83403190-83403209 Msa0578770:intron 45.0%
TTATCCGGCACAAAATGTGC+CGG - chr4_1:83403216-83403235 Msa0578770:intron 45.0%
ACTTACACTCTTGCTCAACC+CGG + chr4_1:83403275-83403294 None:intergenic 45.0%
TCTGATGACCATCCACCAAA+TGG - chr4_1:83403559-83403578 Msa0578770:intron 45.0%
! CAGTAACACCATTTGGTGGA+TGG + chr4_1:83403570-83403589 None:intergenic 45.0%
GCTATGCCAGAAACAGAGTT+TGG - chr4_1:83403676-83403695 Msa0578770:intron 45.0%
ATGCCAGAAACAGAGTTTGG+TGG - chr4_1:83403679-83403698 Msa0578770:intron 45.0%
ACTCCACCAAACTCTGTTTC+TGG + chr4_1:83403685-83403704 None:intergenic 45.0%
! TGGAGTACGTGTTTGGGTTA+CGG + chr4_1:83403906-83403925 None:intergenic 45.0%
CCAAATTAGACCAATGAGGC+TGG + chr4_1:83403926-83403945 None:intergenic 45.0%
! CCAGCCTCATTGGTCTAATT+TGG - chr4_1:83403923-83403942 Msa0578770:intron 45.0%
ATCTCCATACTGTCTGATGC+TGG - chr4_1:83404168-83404187 Msa0578770:intron 45.0%
AAGACCAGCATCAGACAGTA+TGG + chr4_1:83404175-83404194 None:intergenic 45.0%
! ATACTGTCTGATGCTGGTCT+TGG - chr4_1:83404174-83404193 Msa0578770:intron 45.0%
TGAATAGGGTACAATGGCAG+TGG - chr4_1:83404500-83404519 Msa0578770:CDS 45.0%
TGGCAGTGGAATGAATGTGA+TGG - chr4_1:83404514-83404533 Msa0578770:CDS 45.0%
GTTCAGCAAACATGGTCACT+TGG + chr4_1:83404655-83404674 None:intergenic 45.0%
AATATCAGACCCCACATGTC+GGG + chr4_1:83404714-83404733 None:intergenic 45.0%
!! ATTTTAGCGGTCCACGACTA+TGG - chr4_1:83404731-83404750 Msa0578770:intron 45.0%
CTCAGTTGCTTCATTTGCCA+TGG - chr4_1:83404998-83405017 Msa0578770:CDS 45.0%
TACTTGCAGTAAGTGACCAC+CGG + chr4_1:83405221-83405240 None:intergenic 45.0%
AAATAGGCTGCACTTCCTCA+AGG - chr4_1:83405556-83405575 Msa0578770:CDS 45.0%
AATAGGCTGCACTTCCTCAA+GGG - chr4_1:83405557-83405576 Msa0578770:CDS 45.0%
TGGATGGACATTGTACTCCT+TGG + chr4_1:83405602-83405621 None:intergenic 45.0%
ATCCAGCCATTCTCAGTACA+GGG - chr4_1:83405617-83405636 Msa0578770:CDS 45.0%
! GGGAGTATGCAAGCATTCTT+TGG - chr4_1:83405883-83405902 Msa0578770:CDS 45.0%
! GTGACCACAGTGTCACATTT+TGG - chr4_1:83405905-83405924 Msa0578770:CDS 45.0%
GCATATGAGAGACACAACAG+AGG - chr4_1:83406137-83406156 Msa0578770:five_prime_UTR 45.0%
GAGACACAACAGAGGAAAAC+AGG - chr4_1:83406145-83406164 Msa0578770:five_prime_UTR 45.0%
GACACAACAGAGGAAAACAG+GGG - chr4_1:83406147-83406166 Msa0578770:five_prime_UTR 45.0%
! TCACCACGGGTTGCATTAAA+AGG + chr4_1:83406387-83406406 None:intergenic 45.0%
!!! TTTTATATTAGAAAATATAA+TGG + chr4_1:83404336-83404355 None:intergenic 5.0%
GTGTGAGAGAGAGAGAGAGA+CGG + chr4_1:83402041-83402060 None:intergenic 50.0%
! GTTGTGACTGGACTAGGAGA+GGG + chr4_1:83402170-83402189 None:intergenic 50.0%
! AGTTGTGACTGGACTAGGAG+AGG + chr4_1:83402171-83402190 None:intergenic 50.0%
GGTGGAGTTGTTGAGATAGG+AGG + chr4_1:83402250-83402269 None:intergenic 50.0%
!!! AGGCTTTTTGGTAATGGCGG+TGG + chr4_1:83402268-83402287 None:intergenic 50.0%
AACTGTGTAGAGATCGTGCC+AGG + chr4_1:83402306-83402325 None:intergenic 50.0%
!! TTTATGCCGGAGCATTGGTC+CGG + chr4_1:83402404-83402423 None:intergenic 50.0%
AACGGTTTATGCCGGAGCAT+TGG + chr4_1:83402409-83402428 None:intergenic 50.0%
CTGCGAAAATCGCGACGAAA+CGG + chr4_1:83402427-83402446 None:intergenic 50.0%
CTTGAGACTGATGCTGAGGT+TGG - chr4_1:83402863-83402882 Msa0578770:intron 50.0%
!! GATGCTGAGGTTGGTGATGA+TGG - chr4_1:83402872-83402891 Msa0578770:intron 50.0%
AAATTAGACCCTCTCGGCGT+CGG + chr4_1:83403013-83403032 None:intergenic 50.0%
TCCGTTCAGTCCAATTCACG+TGG - chr4_1:83403106-83403125 Msa0578770:intron 50.0%
CCCACGTGAATTGGACTGAA+CGG + chr4_1:83403110-83403129 None:intergenic 50.0%
CCGTTCAGTCCAATTCACGT+GGG - chr4_1:83403107-83403126 Msa0578770:intron 50.0%
! AGAATTCCGGGTTTGGAGCT+GGG + chr4_1:83403249-83403268 None:intergenic 50.0%
CCAAACCCGGAATTCTCTTC+CGG - chr4_1:83403253-83403272 Msa0578770:intron 50.0%
CAAACCCGGAATTCTCTTCC+GGG - chr4_1:83403254-83403273 Msa0578770:intron 50.0%
TCAACCCGGAAGAGAATTCC+GGG + chr4_1:83403261-83403280 None:intergenic 50.0%
CTCAACCCGGAAGAGAATTC+CGG + chr4_1:83403262-83403281 None:intergenic 50.0%
!! GGTAGTGGTGCTGCTGATTA+CGG - chr4_1:83403478-83403497 Msa0578770:intron 50.0%
! TACGGAGCGTCTGATCAATC+TGG - chr4_1:83403496-83403515 Msa0578770:intron 50.0%
TGTGTTTCACGGTGGCTGTT+GGG + chr4_1:83403825-83403844 None:intergenic 50.0%
ATGTGTTTCACGGTGGCTGT+TGG + chr4_1:83403826-83403845 None:intergenic 50.0%
AGACGGGTCATAACACTAGC+CGG + chr4_1:83403853-83403872 None:intergenic 50.0%
GACCCGTCTCATTCTGATCA+TGG - chr4_1:83403864-83403883 Msa0578770:intron 50.0%
TGAGGCTGGAGTACGTGTTT+GGG + chr4_1:83403912-83403931 None:intergenic 50.0%
ATGAGGCTGGAGTACGTGTT+TGG + chr4_1:83403913-83403932 None:intergenic 50.0%
AACACGTACTCCAGCCTCAT+TGG - chr4_1:83403913-83403932 Msa0578770:intron 50.0%
!! GTCTGATGCTGGTCTTGGAA+TGG - chr4_1:83404179-83404198 Msa0578770:intron 50.0%
ATATCAGACCCCACATGTCG+GGG + chr4_1:83404713-83404732 None:intergenic 50.0%
ACATGTCCCTACCATAGTCG+TGG + chr4_1:83404745-83404764 None:intergenic 50.0%
TCTTACAGGTCCTGCAGTCA+TGG - chr4_1:83405031-83405050 Msa0578770:CDS 50.0%
ACATGAATCAGCATTCCCGG+TGG - chr4_1:83405202-83405221 Msa0578770:CDS 50.0%
ACTTGCAGTAAGTGACCACC+GGG + chr4_1:83405220-83405239 None:intergenic 50.0%
TACGTGTAGTCAGTGACCAC+AGG - chr4_1:83405351-83405370 Msa0578770:CDS 50.0%
ACGTGTAGTCAGTGACCACA+GGG - chr4_1:83405352-83405371 Msa0578770:CDS 50.0%
CTGTACTGAGAATGGCTGGA+TGG + chr4_1:83405618-83405637 None:intergenic 50.0%
CATCCAGCCATTCTCAGTAC+AGG - chr4_1:83405616-83405635 Msa0578770:CDS 50.0%
TACCCTGTACTGAGAATGGC+TGG + chr4_1:83405622-83405641 None:intergenic 50.0%
! GCTCCTTTTAATGCAACCCG+TGG - chr4_1:83406381-83406400 Msa0578770:five_prime_UTR 50.0%
GGCGGTGGAGTTGTTGAGAT+AGG + chr4_1:83402253-83402272 None:intergenic 55.0%
TTCTCACCGGACCAATGCTC+CGG - chr4_1:83402395-83402414 Msa0578770:three_prime_UTR 55.0%
CGCGACGAAACGGTTTATGC+CGG + chr4_1:83402417-83402436 None:intergenic 55.0%
TCTGCTCCGGTGAGATTCGA+CGG + chr4_1:83402962-83402981 None:intergenic 55.0%
! TTTGGAGCTGGGTAAGCTGC+CGG + chr4_1:83403238-83403257 None:intergenic 55.0%
AGCTTACCCAGCTCCAAACC+CGG - chr4_1:83403240-83403259 Msa0578770:intron 55.0%
! GAGAATTCCGGGTTTGGAGC+TGG + chr4_1:83403250-83403269 None:intergenic 55.0%
CCGGAAGAGAATTCCGGGTT+TGG + chr4_1:83403256-83403275 None:intergenic 55.0%
GGGCTTCAAGTCTTCGGTAG+TGG - chr4_1:83403463-83403482 Msa0578770:intron 55.0%
CAATCTGGACGCTCCGAACA+AGG - chr4_1:83403511-83403530 Msa0578770:intron 55.0%
!! CCTAGCTTGTTCAGAGCAGC+TGG + chr4_1:83403775-83403794 None:intergenic 55.0%
! CCAGCTGCTCTGAACAAGCT+AGG - chr4_1:83403772-83403791 Msa0578770:intron 55.0%
! GCTGCTCTGAACAAGCTAGG+AGG - chr4_1:83403775-83403794 Msa0578770:intron 55.0%
GCTAGGAGGATCCAGCTCAA+CGG - chr4_1:83403789-83403808 Msa0578770:intron 55.0%
CACCGTGAAACACATGCCTC+CGG - chr4_1:83403831-83403850 Msa0578770:intron 55.0%
! AGCCGGAGGCATGTGTTTCA+CGG + chr4_1:83403836-83403855 None:intergenic 55.0%
AGTGCAATGTCCCCGACATG+TGG - chr4_1:83404700-83404719 Msa0578770:CDS 55.0%
GTGCAATGTCCCCGACATGT+GGG - chr4_1:83404701-83404720 Msa0578770:CDS 55.0%
TGCAATGTCCCCGACATGTG+GGG - chr4_1:83404702-83404721 Msa0578770:CDS 55.0%
TAGCGGTCCACGACTATGGT+AGG - chr4_1:83404735-83404754 Msa0578770:intron 55.0%
AGCGGTCCACGACTATGGTA+GGG - chr4_1:83404736-83404755 Msa0578770:intron 55.0%
GCTGCAGCTTCCATTGCTGT+TGG - chr4_1:83405053-83405072 Msa0578770:CDS 55.0%
! TCCATTGCTGTTGGACTGCG+TGG - chr4_1:83405062-83405081 Msa0578770:CDS 55.0%
TAGCCTATGGCTCCGTACGG+TGG - chr4_1:83402363-83402382 Msa0578770:three_prime_UTR 60.0%
TGGAGTCGGCCCACGTGAAT+TGG + chr4_1:83403119-83403138 None:intergenic 60.0%
! GCTGCCGGCACATTTTGTGC+CGG + chr4_1:83403223-83403242 None:intergenic 60.0%
!! GACTTGAAGCCCGCTGGCTT+CGG + chr4_1:83403455-83403474 None:intergenic 60.0%
! GCCAGCGGGCTTCAAGTCTT+CGG - chr4_1:83403457-83403476 Msa0578770:intron 60.0%
ACCGAAGACTTGAAGCCCGC+TGG + chr4_1:83403461-83403480 None:intergenic 60.0%
AGGAGGATCCAGCTCAACGG+CGG - chr4_1:83403792-83403811 Msa0578770:intron 60.0%
! CGGAGGCATGTGTTTCACGG+TGG + chr4_1:83403833-83403852 None:intergenic 60.0%
CGGGTCATAACACTAGCCGG+AGG + chr4_1:83403850-83403869 None:intergenic 60.0%
GAAGCTGCAGCCATGACTGC+AGG + chr4_1:83405044-83405063 None:intergenic 60.0%
GCCACGCAGTCCAACAGCAA+TGG + chr4_1:83405066-83405085 None:intergenic 60.0%
CACAGTCAGGAGATCCGCGA+CGG - chr4_1:83405245-83405264 Msa0578770:CDS 60.0%
CCACCACCGTACGGAGCCAT+AGG + chr4_1:83402369-83402388 None:intergenic 65.0%
CCTATGGCTCCGTACGGTGG+TGG - chr4_1:83402366-83402385 Msa0578770:three_prime_UTR 65.0%
CCACGGCCGTCGAATCTCAC+CGG - chr4_1:83402953-83402972 Msa0578770:intron 65.0%
! ACCCTCTCGGCGTCGGATTC+CGG + chr4_1:83403006-83403025 None:intergenic 65.0%
! GTGGAGCTCTAGTGCCTCGC+CGG - chr4_1:83403426-83403445 Msa0578770:CDS 65.0%
TCGCCGGTATCCGAAGCCAG+CGG - chr4_1:83403442-83403461 Msa0578770:intron 65.0%
!! AGCCCGCTGGCTTCGGATAC+CGG + chr4_1:83403448-83403467 None:intergenic 65.0%
GTGTAGCTCCGCCGTTGAGC+TGG + chr4_1:83403803-83403822 None:intergenic 65.0%
CCGGTGAGATTCGACGGCCG+TGG + chr4_1:83402956-83402975 None:intergenic 70.0%
TCCCGGAATCCGACGCCGAG+AGG - chr4_1:83403001-83403020 Msa0578770:intron 70.0%
! CCCTCTCGGCGTCGGATTCC+GGG + chr4_1:83403005-83403024 None:intergenic 70.0%
CCCGGAATCCGACGCCGAGA+GGG - chr4_1:83403002-83403021 Msa0578770:intron 70.0%
CCGCTGTTGCAGCTGGCGCA+GGG + chr4_1:83403165-83403184 None:intergenic 70.0%
CCCTGCGCCAGCTGCAACAG+CGG - chr4_1:83403162-83403181 Msa0578770:intron 70.0%
ACCGCTGTTGCAGCTGGCGC+AGG + chr4_1:83403166-83403185 None:intergenic 70.0%
GCCAGCTGCAACAGCGGTGC+AGG - chr4_1:83403168-83403187 Msa0578770:intron 70.0%
GCCTGCACCGCTGTTGCAGC+TGG + chr4_1:83403172-83403191 None:intergenic 70.0%
! GCTGGCTTCGGATACCGGCG+AGG + chr4_1:83403443-83403462 None:intergenic 70.0%
CGCCGGTATCCGAAGCCAGC+GGG - chr4_1:83403443-83403462 Msa0578770:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 83401991 83406415 83401991 ID=Msa0578770;Name=Msa0578770
chr4_1 mRNA 83401991 83406415 83401991 ID=Msa0578770-mRNA-1;Parent=Msa0578770;Name=Msa0578770-mRNA-1;_AED=0.10;_eAED=0.10;_QI=305|1|1|1|1|1|6|605|659
chr4_1 exon 83401991 83402662 83401991 ID=Msa0578770-mRNA-1:exon:30400;Parent=Msa0578770-mRNA-1
chr4_1 exon 83402768 83402844 83402768 ID=Msa0578770-mRNA-1:exon:30399;Parent=Msa0578770-mRNA-1
chr4_1 exon 83403294 83403451 83403294 ID=Msa0578770-mRNA-1:exon:30398;Parent=Msa0578770-mRNA-1
chr4_1 exon 83404190 83404275 83404190 ID=Msa0578770-mRNA-1:exon:30397;Parent=Msa0578770-mRNA-1
chr4_1 exon 83404444 83404729 83404444 ID=Msa0578770-mRNA-1:exon:30396;Parent=Msa0578770-mRNA-1
chr4_1 exon 83404805 83406415 83404805 ID=Msa0578770-mRNA-1:exon:30395;Parent=Msa0578770-mRNA-1
chr4_1 five_prime_UTR 83406111 83406415 83406111 ID=Msa0578770-mRNA-1:five_prime_utr;Parent=Msa0578770-mRNA-1
chr4_1 CDS 83404805 83406110 83404805 ID=Msa0578770-mRNA-1:cds;Parent=Msa0578770-mRNA-1
chr4_1 CDS 83404444 83404729 83404444 ID=Msa0578770-mRNA-1:cds;Parent=Msa0578770-mRNA-1
chr4_1 CDS 83404190 83404275 83404190 ID=Msa0578770-mRNA-1:cds;Parent=Msa0578770-mRNA-1
chr4_1 CDS 83403294 83403451 83403294 ID=Msa0578770-mRNA-1:cds;Parent=Msa0578770-mRNA-1
chr4_1 CDS 83402768 83402844 83402768 ID=Msa0578770-mRNA-1:cds;Parent=Msa0578770-mRNA-1
chr4_1 CDS 83402596 83402662 83402596 ID=Msa0578770-mRNA-1:cds;Parent=Msa0578770-mRNA-1
chr4_1 three_prime_UTR 83401991 83402595 83401991 ID=Msa0578770-mRNA-1:three_prime_utr;Parent=Msa0578770-mRNA-1
Gene Sequence

>Msa0578770

ATGATAACCTGGCACGATCTCTACACAGTTTTAACCGCAGTAGTTCCACTTTACGTAGCCATGATTTTAGCCTATGGCTCCGTACGGTGGTGGAAAATATTCTCACCGGACCAATGCTCCGGCATAAACCGTTTCGTCGCGATTTTCGCAGTTCCTCTTCTATCCTTTCATTTCATCTCCACAAATAACCCTTATGCCATGAACTATAGGTTCATAGCAGCTGATACACTTCAAAAAATCATCATGCTCTTTGCACTTACAATTTGGACTAATTTCACAGCTAATGGTAGCTTAGAGTGGATGATCACAATCTTCTCTCTTTCAACATTACCCAACACTTTGGTTATGGGAATTCCACTTCTCATAGCTATGTATGGTGAATATTCCGGTACCCTTATGGTTCAAGTTGTGGTTCTTCAGTGTATCATTTGGTACACTTTGCTTTTGTTTTTGTTCGAGTATCGTGGTGCTAAGCTTTTGATTATGGAACAATTTCCTGAAACTGCTGCTTCTATTGTTTCCTTTAAGGTTGATTCCGATGTTGTTTCGCTTGATGGAAGAGATTTTCTTGAGACTGATGCTGAGGTTGGTGATGATGGTAAGCTTCATGTTCATGTCAGAAAATCAAACGCTTCCCGGAGATCTTTTATGATGACTCCACGGCCGTCGAATCTCACCGGAGCAGAGATTTATAGCTTGAGTTCTTCCCGGAATCCGACGCCGAGAGGGTCTAATTTTAATCATACGGATTTCTACTCTATGATGGGCTATGCTCCGAGACATTCTAATTTTGGTGCTAATGATGTGTATTCCGTTCAGTCCAATTCACGTGGGCCGACTCCAAGACCGTCAAACTTCGAAGAGAACCCTGCGCCAGCTGCAACAGCGGTGCAGGCTGTGAACTCTCCGAAATTTGGATTTTATCCGGCACAAAATGTGCCGGCAGCTTACCCAGCTCCAAACCCGGAATTCTCTTCCGGGTTGAGCAAGAGTGTAAGTAAAAACTCTCAGCAACAGTTATCACAGCAACAGACTCAGCAAACAGTTCAAGTACAACCACAAACAGTTACTAACAATGGCTCTGCTGCTGCTAAAATTAGCCATGATGCTAAAGAGCTTCACATGTTTGTGTGGAGCTCTAGTGCCTCGCCGGTATCCGAAGCCAGCGGGCTTCAAGTCTTCGGTAGTGGTGCTGCTGATTACGGAGCGTCTGATCAATCTGGACGCTCCGAACAAGGTGCTAAAGAGATTAGAATGTTGGTTTCTGATGACCATCCACCAAATGGTGTTACTGTTACCAACAAAGCTATGCCAGAAACAGAGTTTGGTGGAGTAGAAGAGTTGAAATTTCCAGTTAAAGAAGAAGAATTACTGGTAGAAGATGAGGTAGAGAAAGGGGAACCAGCTGCTCTGAACAAGCTAGGAGGATCCAGCTCAACGGCGGAGCTACACCCAACAGCCACCGTGAAACACATGCCTCCGGCTAGTGTTATGACCCGTCTCATTCTGATCATGGTTTGGCGTAAGCTTATCCGTAACCCAAACACGTACTCCAGCCTCATTGGTCTAATTTGGTCTCTTGTGGCATTTAGGTGGCATGTGCATATGCCTAAAATAATAGAGAAATCAATCTCCATACTGTCTGATGCTGGTCTTGGAATGGCTATGTTCAGTTTAGGTTTGTTTATGGCTCTACAACCTAAGATGATTGCATGTGGAAACTCAGTTGCTTCATTTGCCATGGCTGTTCGATTTCTTACAGGTCCTGCAGTCATGGCTGCAGCTTCCATTGCTGTTGGACTGCGTGGCAACCTTTTACGTGTAGCTATTGTTCAGGCTGCACTTCCTCAAGGGATTGTTCCATTTGTGTTTGCCAAGGAGTACAATGTCCATCCAGCCATTCTCAGTACAGGGGTTATTTTTGGGATGTTGATAGCTCTACCAATTACTCTAGTCTACTACATATTACTTGGTTTGTAA
Protein sequence

>Msa0578770

MITWHDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNNPYAMNYRFIAADTLQKIIMLFALTIWTNFTANGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGEYSGTLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVVSLDGRDFLETDAEVGDDGKLHVHVRKSNASRRSFMMTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHTDFYSMMGYAPRHSNFGANDVYSVQSNSRGPTPRPSNFEENPAPAATAVQAVNSPKFGFYPAQNVPAAYPAPNPEFSSGLSKSVSKNSQQQLSQQQTQQTVQVQPQTVTNNGSAAAKISHDAKELHMFVWSSSASPVSEASGLQVFGSGAADYGASDQSGRSEQGAKEIRMLVSDDHPPNGVTVTNKAMPETEFGGVEELKFPVKEEELLVEDEVEKGEPAALNKLGGSSSTAELHPTATVKHMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVAFRWHVHMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKMIACGNSVASFAMAVRFLTGPAVMAAASIAVGLRGNLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYILLGL*