Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1048400 | RHN44214.1 | 94.953 | 535 | 20 | 1 | 4 | 531 | 36 | 570 | 0.0 | 1046 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1048400 | sp|P77931|PVADH_PSESP | 26.874 | 547 | 276 | 20 | 22 | 510 | 132 | 612 | 3.81e-41 | 160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1048400 | A0A396GXN5 | 94.953 | 535 | 20 | 1 | 4 | 531 | 36 | 570 | 0.0 | 1046 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa1048400 | 0.821579 | 3.744873e-53 | -8.615850e-47 |
| Msa0024650 | Msa1048400 | 0.805760 | 1.142629e-49 | -8.615850e-47 |
| Msa0025570 | Msa1048400 | 0.808969 | 2.384687e-50 | -8.615850e-47 |
| Msa0063540 | Msa1048400 | 0.816471 | 5.435921e-52 | -8.615850e-47 |
| Msa0073110 | Msa1048400 | 0.816650 | 4.957235e-52 | -8.615850e-47 |
| Msa0095910 | Msa1048400 | 0.804954 | 1.685729e-49 | -8.615850e-47 |
| Msa0120450 | Msa1048400 | 0.813876 | 2.050015e-51 | -8.615850e-47 |
| Msa0609460 | Msa1048400 | 0.819776 | 9.724980e-53 | -8.615850e-47 |
| Msa0612220 | Msa1048400 | 0.800575 | 1.351405e-48 | -8.615850e-47 |
| Msa0616300 | Msa1048400 | 0.812008 | 5.262135e-51 | -8.615850e-47 |
| Msa0629160 | Msa1048400 | 0.802608 | 5.174404e-49 | -8.615850e-47 |
| Msa0631700 | Msa1048400 | 0.804165 | 2.461822e-49 | -8.615850e-47 |
| Msa0633940 | Msa1048400 | 0.804018 | 2.642404e-49 | -8.615850e-47 |
| Msa0633970 | Msa1048400 | 0.808983 | 2.368091e-50 | -8.615850e-47 |
| Msa0634290 | Msa1048400 | 0.812569 | 3.969534e-51 | -8.615850e-47 |
| Msa0645370 | Msa1048400 | 0.801967 | 7.013377e-49 | -8.615850e-47 |
| Msa0645380 | Msa1048400 | 0.825108 | 5.609954e-54 | -8.615850e-47 |
| Msa0650100 | Msa1048400 | 0.811130 | 8.165679e-51 | -8.615850e-47 |
| Msa0670360 | Msa1048400 | 0.814920 | 1.204596e-51 | -8.615850e-47 |
| Msa0671640 | Msa1048400 | 0.811687 | 6.180375e-51 | -8.615850e-47 |
| Msa0699170 | Msa1048400 | 0.808733 | 2.678332e-50 | -8.615850e-47 |
| Msa0699640 | Msa1048400 | 0.801024 | 1.094139e-48 | -8.615850e-47 |
| Msa0715220 | Msa1048400 | 0.809403 | 1.925403e-50 | -8.615850e-47 |
| Msa0757120 | Msa1048400 | 0.800358 | 1.496469e-48 | -8.615850e-47 |
| Msa0768670 | Msa1048400 | 0.801051 | 1.080644e-48 | -8.615850e-47 |
| Msa0798150 | Msa1048400 | 0.809723 | 1.643267e-50 | -8.615850e-47 |
| Msa0803170 | Msa1048400 | 0.804146 | 2.485262e-49 | -8.615850e-47 |
| Msa0814160 | Msa1048400 | 0.837210 | 5.943896e-57 | -8.615850e-47 |
| Msa0822410 | Msa1048400 | 0.809395 | 1.932569e-50 | -8.615850e-47 |
| Msa0841520 | Msa1048400 | 0.813821 | 2.108215e-51 | -8.615850e-47 |
| Msa0125600 | Msa1048400 | 0.805580 | 1.246670e-49 | -8.615850e-47 |
| Msa0150000 | Msa1048400 | 0.812135 | 4.937970e-51 | -8.615850e-47 |
| Msa0150910 | Msa1048400 | 0.822486 | 2.309074e-53 | -8.615850e-47 |
| Msa0150920 | Msa1048400 | 0.819983 | 8.719656e-53 | -8.615850e-47 |
| Msa0152990 | Msa1048400 | 0.810680 | 1.021909e-50 | -8.615850e-47 |
| Msa0163690 | Msa1048400 | 0.801752 | 7.762057e-49 | -8.615850e-47 |
| Msa0168010 | Msa1048400 | 0.802532 | 5.365124e-49 | -8.615850e-47 |
| Msa0190670 | Msa1048400 | 0.809595 | 1.751066e-50 | -8.615850e-47 |
| Msa0207640 | Msa1048400 | 0.813593 | 2.365769e-51 | -8.615850e-47 |
| Msa0209060 | Msa1048400 | 0.804112 | 2.525553e-49 | -8.615850e-47 |
| Msa0209520 | Msa1048400 | 0.804876 | 1.749850e-49 | -8.615850e-47 |
| Msa0232970 | Msa1048400 | 0.812667 | 3.777278e-51 | -8.615850e-47 |
| Msa0232990 | Msa1048400 | 0.804496 | 2.100690e-49 | -8.615850e-47 |
| Msa0366510 | Msa1048400 | 0.838200 | 3.311085e-57 | -8.615850e-47 |
| Msa0369990 | Msa1048400 | 0.806166 | 9.387595e-50 | -8.615850e-47 |
| Msa0374030 | Msa1048400 | 0.823638 | 1.243854e-53 | -8.615850e-47 |
| Msa0374040 | Msa1048400 | 0.820506 | 6.615848e-53 | -8.615850e-47 |
| Msa0380680 | Msa1048400 | 0.810171 | 1.315946e-50 | -8.615850e-47 |
| Msa0391270 | Msa1048400 | 0.814314 | 1.640878e-51 | -8.615850e-47 |
| Msa0408860 | Msa1048400 | 0.805860 | 1.088648e-49 | -8.615850e-47 |
| Msa0414480 | Msa1048400 | 0.838935 | 2.139459e-57 | -8.615850e-47 |
| Msa0419570 | Msa1048400 | 0.810186 | 1.306433e-50 | -8.615850e-47 |
| Msa0447160 | Msa1048400 | 0.807229 | 5.598402e-50 | -8.615850e-47 |
| Msa0454770 | Msa1048400 | 0.823748 | 1.172020e-53 | -8.615850e-47 |
| Msa0464310 | Msa1048400 | 0.821457 | 3.997372e-53 | -8.615850e-47 |
| Msa0991010 | Msa1048400 | 0.814677 | 1.364256e-51 | -8.615850e-47 |
| Msa0995110 | Msa1048400 | 0.800927 | 1.145225e-48 | -8.615850e-47 |
| Msa0996980 | Msa1048400 | 0.817307 | 3.529976e-52 | -8.615850e-47 |
| Msa0996990 | Msa1048400 | 0.802926 | 4.449999e-49 | -8.615850e-47 |
| Msa0998780 | Msa1048400 | 0.813958 | 1.966051e-51 | -8.615850e-47 |
| Msa1006030 | Msa1048400 | 0.806292 | 8.828488e-50 | -8.615850e-47 |
| Msa1006170 | Msa1048400 | 0.818157 | 2.269575e-52 | -8.615850e-47 |
| Msa1006220 | Msa1048400 | 0.811749 | 5.992895e-51 | -8.615850e-47 |
| Msa1018590 | Msa1048400 | 0.824793 | 6.657548e-54 | -8.615850e-47 |
| Msa1022490 | Msa1048400 | 0.809099 | 2.237126e-50 | -8.615850e-47 |
| Msa1022510 | Msa1048400 | 0.818777 | 1.641878e-52 | -8.615850e-47 |
| Msa1024420 | Msa1048400 | 0.808202 | 3.477544e-50 | -8.615850e-47 |
| Msa1024480 | Msa1048400 | 0.804415 | 2.184065e-49 | -8.615850e-47 |
| Msa1029860 | Msa1048400 | 0.817668 | 2.926807e-52 | -8.615850e-47 |
| Msa1030070 | Msa1048400 | 0.801202 | 1.006286e-48 | -8.615850e-47 |
| Msa1030320 | Msa1048400 | 0.821106 | 4.815919e-53 | -8.615850e-47 |
| Msa1035050 | Msa1048400 | 0.806113 | 9.629430e-50 | -8.615850e-47 |
| Msa1041250 | Msa1048400 | 0.818848 | 1.581902e-52 | -8.615850e-47 |
| Msa1041910 | Msa1048400 | 0.813729 | 2.208694e-51 | -8.615850e-47 |
| Msa1048350 | Msa1048400 | 0.829070 | 6.323261e-55 | -8.615850e-47 |
| Msa1048400 | Msa1049400 | 0.806503 | 7.971055e-50 | -8.615850e-47 |
| Msa1048400 | Msa1062060 | 0.819437 | 1.161769e-52 | -8.615850e-47 |
| Msa1048400 | Msa1063210 | 0.801040 | 1.085951e-48 | -8.615850e-47 |
| Msa1048400 | Msa1064940 | 0.820130 | 8.068899e-53 | -8.615850e-47 |
| Msa1048400 | Msa1068730 | 0.820937 | 5.266616e-53 | -8.615850e-47 |
| Msa1048400 | Msa1069350 | 0.806183 | 9.307267e-50 | -8.615850e-47 |
| Msa1048400 | Msa1075090 | 0.806466 | 8.113083e-50 | -8.615850e-47 |
| Msa1048400 | Msa1079820 | 0.825593 | 4.306471e-54 | -8.615850e-47 |
| Msa1048400 | Msa1100310 | 0.862642 | 4.386088e-64 | -8.615850e-47 |
| Msa1048400 | Msa1100330 | 0.804878 | 1.748844e-49 | -8.615850e-47 |
| Msa1048400 | Msa1106030 | 0.814225 | 1.716884e-51 | -8.615850e-47 |
| Msa1048400 | Msa1106680 | 0.807249 | 5.543512e-50 | -8.615850e-47 |
| Msa1048400 | Msa1107220 | 0.813381 | 2.634319e-51 | -8.615850e-47 |
| Msa1048400 | Msa1108560 | 0.820831 | 5.570352e-53 | -8.615850e-47 |
| Msa1048400 | Msa1115980 | 0.807904 | 4.024061e-50 | -8.615850e-47 |
| Msa1048400 | Msa1138110 | 0.802011 | 6.867704e-49 | -8.615850e-47 |
| Msa1048400 | Msa1148210 | 0.815612 | 8.457296e-52 | -8.615850e-47 |
| Msa1048400 | Msa1150760 | 0.818642 | 1.762153e-52 | -8.615850e-47 |
| Msa1048400 | Msa1157210 | 0.817057 | 4.016946e-52 | -8.615850e-47 |
| Msa1048400 | Msa1162430 | 0.801372 | 9.288509e-49 | -8.615850e-47 |
| Msa1048400 | Msa1165670 | 0.804699 | 1.905498e-49 | -8.615850e-47 |
| Msa1048400 | Msa1167960 | 0.818810 | 1.614254e-52 | -8.615850e-47 |
| Msa1048400 | Msa1181090 | 0.846706 | 1.835154e-59 | -8.615850e-47 |
| Msa1048400 | Msa1186340 | 0.805564 | 1.256221e-49 | -8.615850e-47 |
| Msa1048400 | Msa1186430 | 0.819136 | 1.360508e-52 | -8.615850e-47 |
| Msa1048400 | Msa1202110 | 0.804134 | 2.498845e-49 | -8.615850e-47 |
| Msa1048400 | Msa1205360 | 0.813658 | 2.289993e-51 | -8.615850e-47 |
| Msa1048400 | Msa1223960 | 0.809533 | 1.805705e-50 | -8.615850e-47 |
| Msa1048400 | Msa1223990 | 0.813125 | 2.998903e-51 | -8.615850e-47 |
| Msa1048400 | Msa1225850 | 0.827269 | 1.717406e-54 | -8.615850e-47 |
| Msa1048400 | Msa1231720 | 0.814467 | 1.518250e-51 | -8.615850e-47 |
| Msa1048400 | Msa1239210 | 0.808236 | 3.420619e-50 | -8.615850e-47 |
| Msa1048400 | Msa1240710 | 0.813321 | 2.715113e-51 | -8.615850e-47 |
| Msa1048400 | Msa1250280 | 0.808025 | 3.793542e-50 | -8.615850e-47 |
| Msa1048400 | Msa1254870 | 0.804986 | 1.660092e-49 | -8.615850e-47 |
| Msa1048400 | Msa1263110 | 0.814614 | 1.408742e-51 | -8.615850e-47 |
| Msa1048400 | Msa1263120 | 0.806629 | 7.498059e-50 | -8.615850e-47 |
| Msa1048400 | Msa1267990 | 0.811105 | 8.266357e-51 | -8.615850e-47 |
| Msa1048400 | Msa1319010 | 0.811086 | 8.347698e-51 | -8.615850e-47 |
| Msa1048400 | Msa1319030 | 0.801202 | 1.006479e-48 | -8.615850e-47 |
| Msa1048400 | Msa1321970 | 0.811375 | 7.225093e-51 | -8.615850e-47 |
| Msa1048400 | Msa1322500 | 0.823646 | 1.238169e-53 | -8.615850e-47 |
| Msa1048400 | Msa1328430 | 0.804803 | 1.812444e-49 | -8.615850e-47 |
| Msa1048400 | Msa1340440 | 0.800697 | 1.276415e-48 | -8.615850e-47 |
| Msa1048400 | Msa1343590 | 0.814187 | 1.750576e-51 | -8.615850e-47 |
| Msa1048400 | Msa1355340 | 0.827694 | 1.357762e-54 | -8.615850e-47 |
| Msa1048400 | Msa1357830 | 0.821138 | 4.736142e-53 | -8.615850e-47 |
| Msa1048400 | Msa1366480 | 0.805809 | 1.115829e-49 | -8.615850e-47 |
| Msa1048400 | Msa1429550 | 0.810952 | 8.924784e-51 | -8.615850e-47 |
| Msa1048400 | Msa1430350 | 0.801116 | 1.047881e-48 | -8.615850e-47 |
| Msa1048400 | Msa1441450 | 0.805685 | 1.185018e-49 | -8.615850e-47 |
| Msa1048400 | Msa1459610 | 0.811476 | 6.870181e-51 | -8.615850e-47 |
| Msa0242830 | Msa1048400 | 0.825981 | 3.485435e-54 | -8.615850e-47 |
| Msa0267700 | Msa1048400 | 0.823557 | 1.299006e-53 | -8.615850e-47 |
| Msa0269710 | Msa1048400 | 0.808928 | 2.433254e-50 | -8.615850e-47 |
| Msa0272210 | Msa1048400 | 0.832472 | 9.269049e-56 | -8.615850e-47 |
| Msa0279810 | Msa1048400 | 0.805548 | 1.265645e-49 | -8.615850e-47 |
| Msa0281190 | Msa1048400 | 0.814086 | 1.842614e-51 | -8.615850e-47 |
| Msa0287630 | Msa1048400 | 0.811126 | 8.183402e-51 | -8.615850e-47 |
| Msa0288540 | Msa1048400 | 0.810445 | 1.148560e-50 | -8.615850e-47 |
| Msa0303900 | Msa1048400 | 0.801545 | 8.561947e-49 | -8.615850e-47 |
| Msa0319220 | Msa1048400 | 0.804149 | 2.481450e-49 | -8.615850e-47 |
| Msa0326770 | Msa1048400 | 0.805740 | 1.153478e-49 | -8.615850e-47 |
| Msa0333770 | Msa1048400 | 0.803537 | 3.324788e-49 | -8.615850e-47 |
| Msa0346170 | Msa1048400 | 0.817364 | 3.427018e-52 | -8.615850e-47 |
| Msa0348370 | Msa1048400 | 0.812766 | 3.593848e-51 | -8.615850e-47 |
| Msa0354600 | Msa1048400 | 0.809524 | 1.813571e-50 | -8.615850e-47 |
| Msa0490060 | Msa1048400 | 0.815032 | 1.137766e-51 | -8.615850e-47 |
| Msa0506160 | Msa1048400 | 0.801459 | 8.916267e-49 | -8.615850e-47 |
| Msa0510870 | Msa1048400 | 0.811663 | 6.255394e-51 | -8.615850e-47 |
| Msa0515130 | Msa1048400 | 0.801336 | 9.449557e-49 | -8.615850e-47 |
| Msa0535570 | Msa1048400 | 0.824173 | 9.317115e-54 | -8.615850e-47 |
| Msa0538440 | Msa1048400 | 0.814674 | 1.366041e-51 | -8.615850e-47 |
| Msa0538530 | Msa1048400 | 0.811215 | 7.825779e-51 | -8.615850e-47 |
| Msa0540640 | Msa1048400 | 0.811950 | 5.417040e-51 | -8.615850e-47 |
| Msa0548790 | Msa1048400 | 0.816553 | 5.211901e-52 | -8.615850e-47 |
| Msa0549170 | Msa1048400 | 0.800851 | 1.187010e-48 | -8.615850e-47 |
| Msa0555920 | Msa1048400 | 0.805842 | 1.098180e-49 | -8.615850e-47 |
| Msa0587730 | Msa1048400 | 0.807768 | 4.301554e-50 | -8.615850e-47 |
| Msa0591490 | Msa1048400 | 0.828236 | 1.005723e-54 | -8.615850e-47 |
| Msa0593870 | Msa1048400 | 0.810650 | 1.037338e-50 | -8.615850e-47 |
| Msa0594630 | Msa1048400 | 0.835057 | 2.093880e-56 | -8.615850e-47 |
| Msa0857270 | Msa1048400 | 0.806578 | 7.683539e-50 | -8.615850e-47 |
| Msa0861730 | Msa1048400 | 0.820928 | 5.291220e-53 | -8.615850e-47 |
| Msa0873880 | Msa1048400 | 0.827195 | 1.788924e-54 | -8.615850e-47 |
| Msa0873940 | Msa1048400 | 0.811913 | 5.517648e-51 | -8.615850e-47 |
| Msa0891070 | Msa1048400 | 0.809363 | 1.963204e-50 | -8.615850e-47 |
| Msa0893220 | Msa1048400 | 0.845764 | 3.314152e-59 | -8.615850e-47 |
| Msa0896920 | Msa1048400 | 0.837950 | 3.839626e-57 | -8.615850e-47 |
| Msa0898970 | Msa1048400 | 0.821607 | 3.689797e-53 | -8.615850e-47 |
| Msa0913550 | Msa1048400 | 0.814060 | 1.867426e-51 | -8.615850e-47 |
| Msa0918580 | Msa1048400 | 0.810083 | 1.375012e-50 | -8.615850e-47 |
| Msa0946010 | Msa1048400 | 0.827042 | 1.946699e-54 | -8.615850e-47 |
| Msa0956450 | Msa1048400 | 0.816636 | 4.993715e-52 | -8.615850e-47 |
| Msa0959700 | Msa1048400 | 0.802171 | 6.368471e-49 | -8.615850e-47 |
| Msa0964510 | Msa1048400 | 0.828332 | 9.536050e-55 | -8.615850e-47 |
| Msa0975950 | Msa1048400 | 0.821130 | 4.755701e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1048400 | MtrunA17_Chr7g0216931 | 94.953 | 535 | 20 | 1 | 4 | 531 | 36 | 570 | 0.0 | 1046 |
| Msa1048400 | MtrunA17_Chr7g0216961 | 66.791 | 536 | 162 | 7 | 10 | 531 | 6 | 539 | 0.0 | 691 |
| Msa1048400 | MtrunA17_Chr7g0216921 | 78.378 | 111 | 22 | 2 | 421 | 531 | 1 | 109 | 1.35e-52 | 174 |
| Msa1048400 | MtrunA17_Chr7g0216981 | 56.757 | 74 | 32 | 0 | 431 | 504 | 1 | 74 | 6.47e-18 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 119 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTGATTGTTGGAATTTA+TGG | 0.146213 | 7_2:+10098072 | Msa1048400:CDS |
| TGGTAAAAGTTTGAAAATTT+TGG | 0.149572 | 7_2:-10100544 | None:intergenic |
| TCTATACCAGATGCAGATTT+TGG | 0.178689 | 7_2:+10099347 | Msa1048400:CDS |
| GGACATATTTATGCAATTAA+TGG | 0.182423 | 7_2:+10100723 | Msa1048400:CDS |
| GAAACTGGAGCTAGTGTTTA+TGG | 0.192701 | 7_2:+10100774 | Msa1048400:CDS |
| GGCATCTGAATTTGCAATAT+TGG | 0.192813 | 7_2:-10100523 | None:intergenic |
| CCTATCTTTCCATTGTTATC+TGG | 0.239304 | 7_2:-10099017 | None:intergenic |
| GATTTATAATTAATGCAAAT+TGG | 0.254384 | 7_2:+10098013 | Msa1048400:CDS |
| TTCAATCTTGGCCCTTGATT+TGG | 0.259780 | 7_2:+10099226 | Msa1048400:CDS |
| ACATCATTTGCTACACTAAC+AGG | 0.272931 | 7_2:-10100672 | None:intergenic |
| ATGTTAACTACACATGTAAA+TGG | 0.274129 | 7_2:+10099383 | Msa1048400:CDS |
| CTAAAACTGGTGCTATCTTA+TGG | 0.290820 | 7_2:+10098979 | Msa1048400:CDS |
| GATGTTGTATTCATATTTGA+TGG | 0.296749 | 7_2:-10100564 | None:intergenic |
| TATGGACCTGCTGTTGTTAT+TGG | 0.299331 | 7_2:+10098090 | Msa1048400:CDS |
| GCGACAATGGAACCCTTCTA+TGG | 0.323431 | 7_2:+10099465 | Msa1048400:CDS |
| ACACACTTGTCTTGTTCAAT+AGG | 0.329135 | 7_2:-10099182 | None:intergenic |
| TGGAACCCTTCTATGGTTTA+CGG | 0.341891 | 7_2:+10099472 | Msa1048400:CDS |
| TGCTGGATCCACAGATAGAT+TGG | 0.355903 | 7_2:+10100701 | Msa1048400:CDS |
| GCAGGGCCTGGTGGACTAGC+TGG | 0.356768 | 7_2:+10100456 | Msa1048400:CDS |
| TATGCAATTAATGGAAGAAA+TGG | 0.360213 | 7_2:+10100732 | Msa1048400:CDS |
| GGAGAACTGGTGAGCTTGTT+TGG | 0.361738 | 7_2:+10098121 | Msa1048400:CDS |
| AAATTGATGGGTCACTTGTT+TGG | 0.368508 | 7_2:+10097950 | Msa1048400:CDS |
| ATCAAATGGTACAAACAATT+AGG | 0.373006 | 7_2:+10099260 | Msa1048400:CDS |
| ATATGCAGGAGCTGCCATTT+GGG | 0.376249 | 7_2:+10099043 | Msa1048400:CDS |
| TTCCACTTCAAACTTAGTTT+AGG | 0.378011 | 7_2:-10097832 | None:intergenic |
| CATATGCAGGAGCTGCCATT+TGG | 0.379166 | 7_2:+10099042 | Msa1048400:CDS |
| GCTTGTTTGGTTGACTCATT+TGG | 0.385559 | 7_2:+10098134 | Msa1048400:CDS |
| GTGGAGATTTGTTCAATAGA+AGG | 0.386676 | 7_2:+10097770 | Msa1048400:CDS |
| ATATTACCGTAAACCATAGA+AGG | 0.392513 | 7_2:-10099478 | None:intergenic |
| ATCTGGAGGGTGGGTGGCAA+TGG | 0.396972 | 7_2:+10100584 | Msa1048400:CDS |
| ACATGTGTAGTTAACATCAT+TGG | 0.398269 | 7_2:-10099377 | None:intergenic |
| TCAAATATGAATACAACATC+TGG | 0.400754 | 7_2:+10100567 | Msa1048400:CDS |
| AAGTGGATTTGCTTGGGCCT+TGG | 0.403348 | 7_2:+10099439 | Msa1048400:CDS |
| ATTGTACCATTGTATATTGT+TGG | 0.407977 | 7_2:-10097886 | None:intergenic |
| GCTGAAGATTTGTTGATTGT+TGG | 0.409450 | 7_2:+10098063 | Msa1048400:CDS |
| GGATTCTATTCTAACTATAC+TGG | 0.411807 | 7_2:+10100855 | Msa1048400:CDS |
| AAACTGGAGCTAGTGTTTAT+GGG | 0.412511 | 7_2:+10100775 | Msa1048400:CDS |
| GTAAAACTTGATGCTAAAAC+TGG | 0.414947 | 7_2:+10098966 | Msa1048400:CDS |
| CTAGCTGGAGGTGGAACATT+TGG | 0.415102 | 7_2:+10100471 | Msa1048400:CDS |
| ATCAAGGGCCAAGATTGAAT+TGG | 0.424523 | 7_2:-10099222 | None:intergenic |
| TTGACAGGTTTAAATACTAC+TGG | 0.426633 | 7_2:+10097991 | Msa1048400:CDS |
| TTGGCCCTTGATTTGGAGAA+TGG | 0.427694 | 7_2:+10099233 | Msa1048400:CDS |
| TCAGAAAAGTGGATTTGCTT+GGG | 0.432417 | 7_2:+10099433 | Msa1048400:CDS |
| CAAAACTTGGAGAAATTGAC+AGG | 0.435683 | 7_2:+10097976 | Msa1048400:CDS |
| ACTTGTTTGGAAGCAAAACT+TGG | 0.436076 | 7_2:+10097963 | Msa1048400:CDS |
| AACACTAGCTCCAGTTTCAT+AGG | 0.438999 | 7_2:-10100769 | None:intergenic |
| TATTACCATTCTCCAAATCA+AGG | 0.440684 | 7_2:-10099238 | None:intergenic |
| GCCTCTCCAAAATCTGCATC+TGG | 0.444115 | 7_2:-10099353 | None:intergenic |
| TTCAGAAAAGTGGATTTGCT+TGG | 0.445473 | 7_2:+10099432 | Msa1048400:CDS |
| CCAGATAACAATGGAAAGAT+AGG | 0.447627 | 7_2:+10099017 | Msa1048400:CDS |
| CAATAGAAGGTATGCATACA+AGG | 0.450765 | 7_2:+10097783 | Msa1048400:CDS |
| CTCAAAATATTACAGGAAGC+AGG | 0.450923 | 7_2:+10100438 | Msa1048400:intron |
| TATGCAATTAAACAAATTGA+TGG | 0.453501 | 7_2:+10097937 | Msa1048400:CDS |
| GAAAATTGTTGCATATTTCG+TGG | 0.454212 | 7_2:+10098936 | Msa1048400:CDS |
| AAATCACTCCAATTCAATCT+TGG | 0.455297 | 7_2:+10099214 | Msa1048400:CDS |
| GGTATAAATTCTTTGTTCAT+CGG | 0.472260 | 7_2:-10100502 | None:intergenic |
| GCTGGATCCACAGATAGATT+GGG | 0.483918 | 7_2:+10100702 | Msa1048400:CDS |
| TGGAGAATGGTAATATCAAA+TGG | 0.489806 | 7_2:+10099246 | Msa1048400:CDS |
| GTTGTTGCTGTTCAGAAAAG+TGG | 0.490333 | 7_2:+10099422 | Msa1048400:CDS |
| CCTGGTGGACTAGCTGGAGG+TGG | 0.492982 | 7_2:+10100462 | Msa1048400:CDS |
| ATTGGTCTTGAAAGGAGAAC+TGG | 0.494135 | 7_2:+10098108 | Msa1048400:CDS |
| CCACCTCCAGCTAGTCCACC+AGG | 0.496549 | 7_2:-10100462 | None:intergenic |
| AATTAATGCAAATTGGACAT+TGG | 0.503666 | 7_2:+10098020 | Msa1048400:CDS |
| CTGGCAGTACTATTAATGCT+AGG | 0.508867 | 7_2:-10100645 | None:intergenic |
| GGGCCTGGTGGACTAGCTGG+AGG | 0.513516 | 7_2:+10100459 | Msa1048400:CDS |
| TGCTACACTAACAGGGCCAC+TGG | 0.518388 | 7_2:-10100664 | None:intergenic |
| CATGGATATAATGTCTCTCT+AGG | 0.525419 | 7_2:+10100834 | Msa1048400:CDS |
| AAACATGTCTATATTGCCAC+TGG | 0.525634 | 7_2:+10099095 | Msa1048400:CDS |
| AATTAGGAGGATATGATGTA+TGG | 0.528476 | 7_2:+10099276 | Msa1048400:CDS |
| TAGTAATGGATGTGTTTATG+TGG | 0.532402 | 7_2:+10100809 | Msa1048400:CDS |
| CTGTTGTTATTGGTCTTGAA+AGG | 0.533524 | 7_2:+10098100 | Msa1048400:CDS |
| ATATTACAGGAAGCAGGGCC+TGG | 0.533669 | 7_2:+10100444 | Msa1048400:intron |
| GGAAGGACTACTTCCCCAAA+TGG | 0.534598 | 7_2:-10099057 | None:intergenic |
| GGTTCCATTGTCGCGATCCA+AGG | 0.536353 | 7_2:-10099456 | None:intergenic |
| ACAAAAGATCAATATAGAAA+CGG | 0.544179 | 7_2:+10097807 | Msa1048400:CDS |
| GACATGGTAACAACTGCAGC+AGG | 0.551229 | 7_2:-10098165 | None:intergenic |
| AACAAATCTTCAGCCACAGT+TGG | 0.551886 | 7_2:-10098054 | None:intergenic |
| TACCTAAACTAAGTTTGAAG+TGG | 0.552036 | 7_2:+10097830 | Msa1048400:CDS |
| ATGCAATTAAACAAATTGAT+GGG | 0.565315 | 7_2:+10097938 | Msa1048400:CDS |
| TGGGCCTTGGATCGCGACAA+TGG | 0.567744 | 7_2:+10099452 | Msa1048400:CDS |
| ACTTCTAATTGTCCACCTCA+AGG | 0.569129 | 7_2:+10099323 | Msa1048400:CDS |
| TATGCAGGAGCTGCCATTTG+GGG | 0.569248 | 7_2:+10099044 | Msa1048400:CDS |
| GGATGTGTTTATGTGGGTCA+TGG | 0.572048 | 7_2:+10100816 | Msa1048400:CDS |
| TGGCAGTACTATTAATGCTA+GGG | 0.574326 | 7_2:-10100644 | None:intergenic |
| TCAAGACCAATAACAACAGC+AGG | 0.576150 | 7_2:-10098096 | None:intergenic |
| AACTGGAGCTAGTGTTTATG+GGG | 0.580406 | 7_2:+10100776 | Msa1048400:CDS |
| GAATACAACATCTGGAGGGT+GGG | 0.581723 | 7_2:+10100575 | Msa1048400:CDS |
| TTCTATTCTAACTATACTGG+TGG | 0.583777 | 7_2:+10100858 | Msa1048400:CDS |
| GGAAAGATAGGAGCATATGC+AGG | 0.583839 | 7_2:+10099029 | Msa1048400:CDS |
| TATATGTTACCATTCCAGCT+TGG | 0.584829 | 7_2:-10097916 | None:intergenic |
| TCAAAATATTACAGGAAGCA+GGG | 0.585370 | 7_2:+10100439 | Msa1048400:intron |
| TTTCGATAAACATCAATGGA+AGG | 0.586957 | 7_2:-10099074 | None:intergenic |
| GGCTAGAGCAACTCCAACTG+TGG | 0.587661 | 7_2:+10098041 | Msa1048400:CDS |
| AATATGAATACAACATCTGG+AGG | 0.588801 | 7_2:+10100570 | Msa1048400:CDS |
| GTTAATTAGTGGATAAACCA+TGG | 0.591002 | 7_2:+10097748 | Msa1048400:intron |
| ATATATAGGAGTTACTATGT+TGG | 0.592038 | 7_2:+10098882 | Msa1048400:intron |
| GGAACATCTTCACTAGAAGA+AGG | 0.592079 | 7_2:+10098903 | Msa1048400:CDS |
| TGAATACAACATCTGGAGGG+TGG | 0.592918 | 7_2:+10100574 | Msa1048400:CDS |
| TACAACATCTGGAGGGTGGG+TGG | 0.593593 | 7_2:+10100578 | Msa1048400:CDS |
| AGTAATGGATGTGTTTATGT+GGG | 0.600881 | 7_2:+10100810 | Msa1048400:CDS |
| GACACAAAACGCAAATAGTG+AGG | 0.604628 | 7_2:-10100883 | None:intergenic |
| AAATGGTACAAACAATTAGG+AGG | 0.607059 | 7_2:+10099263 | Msa1048400:CDS |
| ATTACCATTCTCCAAATCAA+GGG | 0.618336 | 7_2:-10099237 | None:intergenic |
| CATCATTTGCTACACTAACA+GGG | 0.633028 | 7_2:-10100671 | None:intergenic |
| TTACAGGAAGCAGGGCCTGG+TGG | 0.633564 | 7_2:+10100447 | Msa1048400:intron |
| TATTACCGTAAACCATAGAA+GGG | 0.638518 | 7_2:-10099477 | None:intergenic |
| TATTGAACAAATCTCCACCA+TGG | 0.646101 | 7_2:-10097765 | None:intergenic |
| TTTATGTTGCCAGATAACAA+TGG | 0.652568 | 7_2:+10099008 | Msa1048400:CDS |
| AATATGTCCCAATCTATCTG+TGG | 0.653384 | 7_2:-10100709 | None:intergenic |
| AGCATTAATAGTACTGCCAG+TGG | 0.657825 | 7_2:+10100648 | Msa1048400:CDS |
| CACAAAACAAAAGTAAACAA+AGG | 0.657923 | 7_2:-10097601 | None:intergenic |
| GTGGCAATGGATGCTAGCAA+TGG | 0.659562 | 7_2:+10100597 | Msa1048400:CDS |
| GCAACACCAACAATATACAA+TGG | 0.660582 | 7_2:+10097880 | Msa1048400:CDS |
| ATATGAATACAACATCTGGA+GGG | 0.684673 | 7_2:+10100571 | Msa1048400:CDS |
| TCTGGTATAGAACCTTGAGG+TGG | 0.699068 | 7_2:-10099335 | None:intergenic |
| AGCAGAATAGAGATTTCCAG+TGG | 0.699205 | 7_2:-10099111 | None:intergenic |
| GCATCTGGTATAGAACCTTG+AGG | 0.720540 | 7_2:-10099338 | None:intergenic |
| ACTGGAGCTAGTGTTTATGG+GGG | 0.731779 | 7_2:+10100777 | Msa1048400:CDS |
| AATTAGTGGATAAACCATGG+TGG | 0.751900 | 7_2:+10097751 | Msa1048400:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGATGAATATATATTTTTT+TGG | + | chr7_2:10098716-10098735 | Msa1048400:intron | 10.0% |
| !! | TAATTATACTTTGATATAAA+AGG | - | chr7_2:10098849-10098868 | None:intergenic | 10.0% |
| !!! | TTTAAAAGATGTTTTTTTTA+AGG | + | chr7_2:10099520-10099539 | Msa1048400:intron | 10.0% |
| !! | GATTTATAATTAATGCAAAT+TGG | + | chr7_2:10098013-10098032 | Msa1048400:CDS | 15.0% |
| !! | TTTACACAAATGATATTTAA+AGG | + | chr7_2:10098546-10098565 | Msa1048400:intron | 15.0% |
| !! | TTACACAAATGATATTTAAA+GGG | + | chr7_2:10098547-10098566 | Msa1048400:intron | 15.0% |
| !!! | AAAAAAACATCTTTTAAAAG+AGG | - | chr7_2:10099518-10099537 | None:intergenic | 15.0% |
| !! | AATAAGAAGATTAGATTAAT+AGG | + | chr7_2:10099603-10099622 | Msa1048400:intron | 15.0% |
| !! | CAAACAAAAATTAAAACATA+AGG | - | chr7_2:10099856-10099875 | None:intergenic | 15.0% |
| !!! | CTTATGTTTTAATTTTTGTT+TGG | + | chr7_2:10099854-10099873 | Msa1048400:intron | 15.0% |
| !! | ACTAAACAAAAAATGTTATT+GGG | - | chr7_2:10099967-10099986 | None:intergenic | 15.0% |
| !! | AACTAAACAAAAAATGTTAT+TGG | - | chr7_2:10099968-10099987 | None:intergenic | 15.0% |
| !!! | ATTTTGCTCAAAAATATATT+AGG | + | chr7_2:10100343-10100362 | Msa1048400:intron | 15.0% |
| !! | GTTAATTTCTTGTTAATTAG+TGG | + | chr7_2:10097737-10097756 | Msa1048400:intron | 20.0% |
| !! | ACAAAAGATCAATATAGAAA+CGG | + | chr7_2:10097807-10097826 | Msa1048400:CDS | 20.0% |
| !! | TATGCAATTAAACAAATTGA+TGG | + | chr7_2:10097937-10097956 | Msa1048400:CDS | 20.0% |
| !! | ATGCAATTAAACAAATTGAT+GGG | + | chr7_2:10097938-10097957 | Msa1048400:CDS | 20.0% |
| !!! | GAAAATACTACTATTTCTTT+AGG | + | chr7_2:10098508-10098527 | Msa1048400:intron | 20.0% |
| !!! | TTTGGAGTTTTTTTCAAAAA+CGG | - | chr7_2:10098585-10098604 | None:intergenic | 20.0% |
| !!! | CATCATAAGTATTTTCTTAT+TGG | - | chr7_2:10098702-10098721 | None:intergenic | 20.0% |
| !! | TCCTAAAAAAAATCAAGTTT+GGG | + | chr7_2:10098793-10098812 | Msa1048400:intron | 20.0% |
| !! | AAAAGGATTGAAAAGAAAAA+AGG | - | chr7_2:10098832-10098851 | None:intergenic | 20.0% |
| !! | ATACTAAACTCTCAATATAT+AGG | + | chr7_2:10098868-10098887 | Msa1048400:intron | 20.0% |
| !! | ATTCAATCACAATTTCATTT+AGG | + | chr7_2:10099577-10099596 | Msa1048400:intron | 20.0% |
| !! | ACAAAAATTAAAACATAAGG+TGG | - | chr7_2:10099853-10099872 | None:intergenic | 20.0% |
| !!! | TGGTAAAAGTTTGAAAATTT+TGG | - | chr7_2:10100547-10100566 | None:intergenic | 20.0% |
| ! | CACAAAACAAAAGTAAACAA+AGG | - | chr7_2:10097604-10097623 | None:intergenic | 25.0% |
| ! | CTCAAGGAATATTAAAGTTT+GGG | - | chr7_2:10097685-10097704 | None:intergenic | 25.0% |
| ! | ACTCAAGGAATATTAAAGTT+TGG | - | chr7_2:10097686-10097705 | None:intergenic | 25.0% |
| !!! | TTCCTTGAGTTTTTAATTTG+AGG | + | chr7_2:10097696-10097715 | Msa1048400:intron | 25.0% |
| ! | AACCTCAAATTAAAAACTCA+AGG | - | chr7_2:10097701-10097720 | None:intergenic | 25.0% |
| !!! | GAGGTTAATTAATTTGCTAT+TGG | + | chr7_2:10097715-10097734 | Msa1048400:intron | 25.0% |
| ! | ATTGTACCATTGTATATTGT+TGG | - | chr7_2:10097889-10097908 | None:intergenic | 25.0% |
| ! | AATTAATGCAAATTGGACAT+TGG | + | chr7_2:10098020-10098039 | Msa1048400:CDS | 25.0% |
| !! | TTGTTGATTGTTGGAATTTA+TGG | + | chr7_2:10098072-10098091 | Msa1048400:CDS | 25.0% |
| ! | ATTATAATAAGTTCCAGACA+TGG | - | chr7_2:10098184-10098203 | None:intergenic | 25.0% |
| !! | ATGTCTGGAACTTATTATAA+TGG | + | chr7_2:10098183-10098202 | Msa1048400:intron | 25.0% |
| !! | TGTCTGGAACTTATTATAAT+GGG | + | chr7_2:10098184-10098203 | Msa1048400:intron | 25.0% |
| !!! | CTTTCCAATGTTTTAAGAAT+CGG | + | chr7_2:10098250-10098269 | Msa1048400:intron | 25.0% |
| ! | ATCATAATCTAATTGAATCG+CGG | + | chr7_2:10098343-10098362 | Msa1048400:intron | 25.0% |
| ! | AAAAAACTCCAAATCTTGTT+TGG | + | chr7_2:10098592-10098611 | Msa1048400:intron | 25.0% |
| ! | GATGGTAAAAAATCTACATA+GGG | - | chr7_2:10098619-10098638 | None:intergenic | 25.0% |
| ! | TGATGGTAAAAAATCTACAT+AGG | - | chr7_2:10098620-10098639 | None:intergenic | 25.0% |
| ! | CTCCTAAAAAAAATCAAGTT+TGG | + | chr7_2:10098792-10098811 | Msa1048400:intron | 25.0% |
| !!! | TCCCAAACTTGATTTTTTTT+AGG | - | chr7_2:10098797-10098816 | None:intergenic | 25.0% |
| ! | ATATATAGGAGTTACTATGT+TGG | + | chr7_2:10098882-10098901 | Msa1048400:intron | 25.0% |
| !! | AAATATGCAACAATTTTCGA+TGG | - | chr7_2:10098934-10098953 | None:intergenic | 25.0% |
| !! | ATGTTTTCGATAAACATCAA+TGG | - | chr7_2:10099081-10099100 | None:intergenic | 25.0% |
| ! | ATCAAATGGTACAAACAATT+AGG | + | chr7_2:10099260-10099279 | Msa1048400:CDS | 25.0% |
| ! | ATGTTAACTACACATGTAAA+TGG | + | chr7_2:10099383-10099402 | Msa1048400:CDS | 25.0% |
| !! | TTGTAGGATTTTCTCTATTA+TGG | - | chr7_2:10099672-10099691 | None:intergenic | 25.0% |
| !! | ATATGCAAGATGTATTTTCT+AGG | + | chr7_2:10100120-10100139 | Msa1048400:intron | 25.0% |
| !! | CAAGTATACATATAGCTTTA+AGG | - | chr7_2:10100171-10100190 | None:intergenic | 25.0% |
| ! | TTATGAGCTCAAAATATTAC+AGG | + | chr7_2:10100431-10100450 | Msa1048400:intron | 25.0% |
| ! | GGTATAAATTCTTTGTTCAT+CGG | - | chr7_2:10100505-10100524 | None:intergenic | 25.0% |
| ! | GATGTTGTATTCATATTTGA+TGG | - | chr7_2:10100567-10100586 | None:intergenic | 25.0% |
| ! | TCAAATATGAATACAACATC+TGG | + | chr7_2:10100567-10100586 | Msa1048400:CDS | 25.0% |
| ! | GGACATATTTATGCAATTAA+TGG | + | chr7_2:10100723-10100742 | Msa1048400:CDS | 25.0% |
| ! | TATGCAATTAATGGAAGAAA+TGG | + | chr7_2:10100732-10100751 | Msa1048400:CDS | 25.0% |
| !! | GAAGAAATGGACATATTTTA+TGG | + | chr7_2:10100745-10100764 | Msa1048400:CDS | 25.0% |
| ! | TTTGTCATCCTGAATTTTTG+CGG | - | chr7_2:10097575-10097594 | None:intergenic | 30.0% |
| ! | GTTAATTAGTGGATAAACCA+TGG | + | chr7_2:10097748-10097767 | Msa1048400:intron | 30.0% |
| TACCTAAACTAAGTTTGAAG+TGG | + | chr7_2:10097830-10097849 | Msa1048400:CDS | 30.0% | |
| TTCCACTTCAAACTTAGTTT+AGG | - | chr7_2:10097835-10097854 | None:intergenic | 30.0% | |
| !! | GTACAATTTATTTTCCAAGC+TGG | + | chr7_2:10097902-10097921 | Msa1048400:CDS | 30.0% |
| !! | ATTTATTTTCCAAGCTGGAA+TGG | + | chr7_2:10097907-10097926 | Msa1048400:CDS | 30.0% |
| TTGACAGGTTTAAATACTAC+TGG | + | chr7_2:10097991-10098010 | Msa1048400:CDS | 30.0% | |
| TGATCCGATTCTTAAAACAT+TGG | - | chr7_2:10098257-10098276 | None:intergenic | 30.0% | |
| ATAATCAAGAACAAACCAAC+CGG | - | chr7_2:10098323-10098342 | None:intergenic | 30.0% | |
| CTGACTAAACTATGACTTAA+AGG | + | chr7_2:10098455-10098474 | Msa1048400:intron | 30.0% | |
| !!! | GTAGATTTTTTACCATCAAG+TGG | + | chr7_2:10098622-10098641 | Msa1048400:intron | 30.0% |
| !!! | TTCGCCTTATTTTTAGAGAT+CGG | + | chr7_2:10098673-10098692 | Msa1048400:intron | 30.0% |
| ! | GTTTCCGATCTCTAAAAATA+AGG | - | chr7_2:10098680-10098699 | None:intergenic | 30.0% |
| GAAAATTGTTGCATATTTCG+TGG | + | chr7_2:10098936-10098955 | Msa1048400:CDS | 30.0% | |
| GTAAAACTTGATGCTAAAAC+TGG | + | chr7_2:10098966-10098985 | Msa1048400:CDS | 30.0% | |
| TTTATGTTGCCAGATAACAA+TGG | + | chr7_2:10099008-10099027 | Msa1048400:CDS | 30.0% | |
| TTTCGATAAACATCAATGGA+AGG | - | chr7_2:10099077-10099096 | None:intergenic | 30.0% | |
| ! | ATTGAATTGGAGTGATTTTC+TGG | - | chr7_2:10099212-10099231 | None:intergenic | 30.0% |
| AAATCACTCCAATTCAATCT+TGG | + | chr7_2:10099214-10099233 | Msa1048400:CDS | 30.0% | |
| ATTACCATTCTCCAAATCAA+GGG | - | chr7_2:10099240-10099259 | None:intergenic | 30.0% | |
| TATTACCATTCTCCAAATCA+AGG | - | chr7_2:10099241-10099260 | None:intergenic | 30.0% | |
| TGGAGAATGGTAATATCAAA+TGG | + | chr7_2:10099246-10099265 | Msa1048400:CDS | 30.0% | |
| AAATGGTACAAACAATTAGG+AGG | + | chr7_2:10099263-10099282 | Msa1048400:CDS | 30.0% | |
| AATTAGGAGGATATGATGTA+TGG | + | chr7_2:10099276-10099295 | Msa1048400:CDS | 30.0% | |
| ACATGTGTAGTTAACATCAT+TGG | - | chr7_2:10099380-10099399 | None:intergenic | 30.0% | |
| TATTACCGTAAACCATAGAA+GGG | - | chr7_2:10099480-10099499 | None:intergenic | 30.0% | |
| ATATTACCGTAAACCATAGA+AGG | - | chr7_2:10099481-10099500 | None:intergenic | 30.0% | |
| ATTAAAACATAAGGTGGTGT+TGG | - | chr7_2:10099847-10099866 | None:intergenic | 30.0% | |
| !! | TTTTGTTTGGATTTCAGTTG+TGG | + | chr7_2:10099867-10099886 | Msa1048400:intron | 30.0% |
| ! | GAACTTTTGATCACGTATAT+GGG | + | chr7_2:10100061-10100080 | Msa1048400:intron | 30.0% |
| ! | GTTCAAGTAGTAAGGAATTT+TGG | - | chr7_2:10100087-10100106 | None:intergenic | 30.0% |
| ATGAACTAGTTCAAGTAGTA+AGG | - | chr7_2:10100095-10100114 | None:intergenic | 30.0% | |
| ! | ACTTAAAAGTTGTTAGCTTG+AGG | + | chr7_2:10100196-10100215 | Msa1048400:intron | 30.0% |
| TCAAAATATTACAGGAAGCA+GGG | + | chr7_2:10100439-10100458 | Msa1048400:intron | 30.0% | |
| AATATGAATACAACATCTGG+AGG | + | chr7_2:10100570-10100589 | Msa1048400:CDS | 30.0% | |
| ATATGAATACAACATCTGGA+GGG | + | chr7_2:10100571-10100590 | Msa1048400:CDS | 30.0% | |
| CTAGCAATGGAAAAATTCTA+TGG | + | chr7_2:10100610-10100629 | Msa1048400:CDS | 30.0% | |
| ! | ATTTTATGGTCCTATGAAAC+TGG | + | chr7_2:10100759-10100778 | Msa1048400:CDS | 30.0% |
| !! | TAGTAATGGATGTGTTTATG+TGG | + | chr7_2:10100809-10100828 | Msa1048400:CDS | 30.0% |
| !! | AGTAATGGATGTGTTTATGT+GGG | + | chr7_2:10100810-10100829 | Msa1048400:CDS | 30.0% |
| GGATTCTATTCTAACTATAC+TGG | + | chr7_2:10100855-10100874 | Msa1048400:CDS | 30.0% | |
| TTCTATTCTAACTATACTGG+TGG | + | chr7_2:10100858-10100877 | Msa1048400:CDS | 30.0% | |
| ! | AATTAGTGGATAAACCATGG+TGG | + | chr7_2:10097751-10097770 | Msa1048400:intron | 35.0% |
| TATTGAACAAATCTCCACCA+TGG | - | chr7_2:10097768-10097787 | None:intergenic | 35.0% | |
| ! | GTGGAGATTTGTTCAATAGA+AGG | + | chr7_2:10097770-10097789 | Msa1048400:CDS | 35.0% |
| ! | CAATAGAAGGTATGCATACA+AGG | + | chr7_2:10097783-10097802 | Msa1048400:CDS | 35.0% |
| GCAACACCAACAATATACAA+TGG | + | chr7_2:10097880-10097899 | Msa1048400:CDS | 35.0% | |
| TATATGTTACCATTCCAGCT+TGG | - | chr7_2:10097919-10097938 | None:intergenic | 35.0% | |
| ! | AAATTGATGGGTCACTTGTT+TGG | + | chr7_2:10097950-10097969 | Msa1048400:CDS | 35.0% |
| ACTTGTTTGGAAGCAAAACT+TGG | + | chr7_2:10097963-10097982 | Msa1048400:CDS | 35.0% | |
| CAAAACTTGGAGAAATTGAC+AGG | + | chr7_2:10097976-10097995 | Msa1048400:CDS | 35.0% | |
| !! | GCTGAAGATTTGTTGATTGT+TGG | + | chr7_2:10098063-10098082 | Msa1048400:CDS | 35.0% |
| !! | CTGTTGTTATTGGTCTTGAA+AGG | + | chr7_2:10098100-10098119 | Msa1048400:CDS | 35.0% |
| CAACTGGTTGAACTAAGAAT+CGG | + | chr7_2:10098289-10098308 | Msa1048400:intron | 35.0% | |
| TAATCTAATTGAATCGCGGT+TGG | + | chr7_2:10098347-10098366 | Msa1048400:intron | 35.0% | |
| !! | CTAAAACTGGTGCTATCTTA+TGG | + | chr7_2:10098979-10098998 | Msa1048400:CDS | 35.0% |
| CCTATCTTTCCATTGTTATC+TGG | - | chr7_2:10099020-10099039 | None:intergenic | 35.0% | |
| CCAGATAACAATGGAAAGAT+AGG | + | chr7_2:10099017-10099036 | Msa1048400:CDS | 35.0% | |
| AAACATGTCTATATTGCCAC+TGG | + | chr7_2:10099095-10099114 | Msa1048400:CDS | 35.0% | |
| !!! | TGACATTCGAGTACGTTTTT+TGG | - | chr7_2:10099137-10099156 | None:intergenic | 35.0% |
| ! | ACACACTTGTCTTGTTCAAT+AGG | - | chr7_2:10099185-10099204 | None:intergenic | 35.0% |
| ! | TCTATACCAGATGCAGATTT+TGG | + | chr7_2:10099347-10099366 | Msa1048400:CDS | 35.0% |
| ! | TTCAGAAAAGTGGATTTGCT+TGG | + | chr7_2:10099432-10099451 | Msa1048400:CDS | 35.0% |
| ! | TCAGAAAAGTGGATTTGCTT+GGG | + | chr7_2:10099433-10099452 | Msa1048400:CDS | 35.0% |
| ! | ATCTCTAGAAACTTCGTACT+AGG | - | chr7_2:10100040-10100059 | None:intergenic | 35.0% |
| ! | CGAACTTTTGATCACGTATA+TGG | + | chr7_2:10100060-10100079 | Msa1048400:intron | 35.0% |
| ! | TAAAAGTTGTTAGCTTGAGG+AGG | + | chr7_2:10100199-10100218 | Msa1048400:intron | 35.0% |
| CTCAAAATATTACAGGAAGC+AGG | + | chr7_2:10100438-10100457 | Msa1048400:intron | 35.0% | |
| GGCATCTGAATTTGCAATAT+TGG | - | chr7_2:10100526-10100545 | None:intergenic | 35.0% | |
| TGGCAGTACTATTAATGCTA+GGG | - | chr7_2:10100647-10100666 | None:intergenic | 35.0% | |
| ! | CATCATTTGCTACACTAACA+GGG | - | chr7_2:10100674-10100693 | None:intergenic | 35.0% |
| ! | ACATCATTTGCTACACTAAC+AGG | - | chr7_2:10100675-10100694 | None:intergenic | 35.0% |
| !!! | GCAAATGATGTTGTTTTTGC+TGG | + | chr7_2:10100684-10100703 | Msa1048400:CDS | 35.0% |
| AATATGTCCCAATCTATCTG+TGG | - | chr7_2:10100712-10100731 | None:intergenic | 35.0% | |
| AAACTGGAGCTAGTGTTTAT+GGG | + | chr7_2:10100775-10100794 | Msa1048400:CDS | 35.0% | |
| CATGGATATAATGTCTCTCT+AGG | + | chr7_2:10100834-10100853 | Msa1048400:CDS | 35.0% | |
| AACAAATCTTCAGCCACAGT+TGG | - | chr7_2:10098057-10098076 | None:intergenic | 40.0% | |
| TATGGACCTGCTGTTGTTAT+TGG | + | chr7_2:10098090-10098109 | Msa1048400:CDS | 40.0% | |
| TCAAGACCAATAACAACAGC+AGG | - | chr7_2:10098099-10098118 | None:intergenic | 40.0% | |
| !! | ATTGGTCTTGAAAGGAGAAC+TGG | + | chr7_2:10098108-10098127 | Msa1048400:CDS | 40.0% |
| ! | GCTTGTTTGGTTGACTCATT+TGG | + | chr7_2:10098134-10098153 | Msa1048400:CDS | 40.0% |
| AAGAATCGGATCATATCAGC+TGG | + | chr7_2:10098264-10098283 | Msa1048400:intron | 40.0% | |
| ! | ATCATATCAGCTGGTTCAAC+TGG | + | chr7_2:10098273-10098292 | Msa1048400:intron | 40.0% |
| CACAAACGCTATTGAACTAG+AGG | - | chr7_2:10098429-10098448 | None:intergenic | 40.0% | |
| ! | CTCTAGTTCAATAGCGTTTG+TGG | + | chr7_2:10098427-10098446 | Msa1048400:intron | 40.0% |
| CATAGGGACCAAACAAGATT+TGG | - | chr7_2:10098603-10098622 | None:intergenic | 40.0% | |
| TCTAACCTCACCATCAAGTA+TGG | + | chr7_2:10098766-10098785 | Msa1048400:intron | 40.0% | |
| CTAACCTCACCATCAAGTAT+GGG | + | chr7_2:10098767-10098786 | Msa1048400:intron | 40.0% | |
| TAACCTCACCATCAAGTATG+GGG | + | chr7_2:10098768-10098787 | Msa1048400:intron | 40.0% | |
| GGAACATCTTCACTAGAAGA+AGG | + | chr7_2:10098903-10098922 | Msa1048400:CDS | 40.0% | |
| AGCAGAATAGAGATTTCCAG+TGG | - | chr7_2:10099114-10099133 | None:intergenic | 40.0% | |
| ATCAAGGGCCAAGATTGAAT+TGG | - | chr7_2:10099225-10099244 | None:intergenic | 40.0% | |
| TTCAATCTTGGCCCTTGATT+TGG | + | chr7_2:10099226-10099245 | Msa1048400:CDS | 40.0% | |
| ACTTCTAATTGTCCACCTCA+AGG | + | chr7_2:10099323-10099342 | Msa1048400:CDS | 40.0% | |
| ! | GTTGTTGCTGTTCAGAAAAG+TGG | + | chr7_2:10099422-10099441 | Msa1048400:CDS | 40.0% |
| TGGAACCCTTCTATGGTTTA+CGG | + | chr7_2:10099472-10099491 | Msa1048400:CDS | 40.0% | |
| ! | GTGCAAGCAACATCTTTTGT+AGG | - | chr7_2:10099688-10099707 | None:intergenic | 40.0% |
| TACGTACCACACCTTGTATT+TGG | + | chr7_2:10099917-10099936 | Msa1048400:intron | 40.0% | |
| ACGTACCACACCTTGTATTT+GGG | + | chr7_2:10099918-10099937 | Msa1048400:intron | 40.0% | |
| TAGTTGACACCCCAAATACA+AGG | - | chr7_2:10099931-10099950 | None:intergenic | 40.0% | |
| TACTAGGCTAGCATTTGTAG+CGG | - | chr7_2:10100024-10100043 | None:intergenic | 40.0% | |
| CTGGCAGTACTATTAATGCT+AGG | - | chr7_2:10100648-10100667 | None:intergenic | 40.0% | |
| AGCATTAATAGTACTGCCAG+TGG | + | chr7_2:10100648-10100667 | Msa1048400:CDS | 40.0% | |
| AACACTAGCTCCAGTTTCAT+AGG | - | chr7_2:10100772-10100791 | None:intergenic | 40.0% | |
| GAAACTGGAGCTAGTGTTTA+TGG | + | chr7_2:10100774-10100793 | Msa1048400:CDS | 40.0% | |
| AACTGGAGCTAGTGTTTATG+GGG | + | chr7_2:10100776-10100795 | Msa1048400:CDS | 40.0% | |
| ! | GGGGGTATGTCAATTAGTAA+TGG | + | chr7_2:10100795-10100814 | Msa1048400:CDS | 40.0% |
| GACACAAAACGCAAATAGTG+AGG | - | chr7_2:10100886-10100905 | None:intergenic | 40.0% | |
| ! | CCTGAATTTTTGCGGTGACA+TGG | - | chr7_2:10097567-10097586 | None:intergenic | 45.0% |
| CCATGTCACCGCAAAAATTC+AGG | + | chr7_2:10097564-10097583 | Msa1048400:CDS | 45.0% | |
| !! | GGTCTCGTCGATTTGATCTT+TGG | + | chr7_2:10098476-10098495 | Msa1048400:intron | 45.0% |
| GTTAATCACGAGCCACTTGA+TGG | - | chr7_2:10098637-10098656 | None:intergenic | 45.0% | |
| TTAGGAGTCCCCATACTTGA+TGG | - | chr7_2:10098779-10098798 | None:intergenic | 45.0% | |
| ! | GGAAAGATAGGAGCATATGC+AGG | + | chr7_2:10099029-10099048 | Msa1048400:CDS | 45.0% |
| ! | ATATGCAGGAGCTGCCATTT+GGG | + | chr7_2:10099043-10099062 | Msa1048400:CDS | 45.0% |
| !! | TTGGCCCTTGATTTGGAGAA+TGG | + | chr7_2:10099233-10099252 | Msa1048400:CDS | 45.0% |
| TCTGGTATAGAACCTTGAGG+TGG | - | chr7_2:10099338-10099357 | None:intergenic | 45.0% | |
| GCATCTGGTATAGAACCTTG+AGG | - | chr7_2:10099341-10099360 | None:intergenic | 45.0% | |
| !! | ACCAGATGCAGATTTTGGAG+AGG | + | chr7_2:10099352-10099371 | Msa1048400:CDS | 45.0% |
| CGTACCACACCTTGTATTTG+GGG | + | chr7_2:10099919-10099938 | Msa1048400:intron | 45.0% | |
| ! | AAGTTGTTAGCTTGAGGAGG+AGG | + | chr7_2:10100202-10100221 | Msa1048400:intron | 45.0% |
| TGAATACAACATCTGGAGGG+TGG | + | chr7_2:10100574-10100593 | Msa1048400:CDS | 45.0% | |
| GAATACAACATCTGGAGGGT+GGG | + | chr7_2:10100575-10100594 | Msa1048400:CDS | 45.0% | |
| TGCTGGATCCACAGATAGAT+TGG | + | chr7_2:10100701-10100720 | Msa1048400:CDS | 45.0% | |
| GCTGGATCCACAGATAGATT+GGG | + | chr7_2:10100702-10100721 | Msa1048400:CDS | 45.0% | |
| ACTGGAGCTAGTGTTTATGG+GGG | + | chr7_2:10100777-10100796 | Msa1048400:CDS | 45.0% | |
| GGATGTGTTTATGTGGGTCA+TGG | + | chr7_2:10100816-10100835 | Msa1048400:CDS | 45.0% | |
| ! | GGAGAACTGGTGAGCTTGTT+TGG | + | chr7_2:10098121-10098140 | Msa1048400:CDS | 50.0% |
| GACATGGTAACAACTGCAGC+AGG | - | chr7_2:10098168-10098187 | None:intergenic | 50.0% | |
| GCTGCAGTTGTTACCATGTC+TGG | + | chr7_2:10098168-10098187 | Msa1048400:intron | 50.0% | |
| CTAAGAATCGGCCAGTTCAC+CGG | + | chr7_2:10098301-10098320 | Msa1048400:intron | 50.0% | |
| GAACAAACCAACCGGTGAAC+TGG | - | chr7_2:10098315-10098334 | None:intergenic | 50.0% | |
| !! | AGTCCCCATACTTGATGGTG+AGG | - | chr7_2:10098774-10098793 | None:intergenic | 50.0% |
| CATATGCAGGAGCTGCCATT+TGG | + | chr7_2:10099042-10099061 | Msa1048400:CDS | 50.0% | |
| ! | TATGCAGGAGCTGCCATTTG+GGG | + | chr7_2:10099044-10099063 | Msa1048400:CDS | 50.0% |
| GGAAGGACTACTTCCCCAAA+TGG | - | chr7_2:10099060-10099079 | None:intergenic | 50.0% | |
| GCCTCTCCAAAATCTGCATC+TGG | - | chr7_2:10099356-10099375 | None:intergenic | 50.0% | |
| ! | AAGTGGATTTGCTTGGGCCT+TGG | + | chr7_2:10099439-10099458 | Msa1048400:CDS | 50.0% |
| GCGACAATGGAACCCTTCTA+TGG | + | chr7_2:10099465-10099484 | Msa1048400:CDS | 50.0% | |
| GACACCCCAAATACAAGGTG+TGG | - | chr7_2:10099926-10099945 | None:intergenic | 50.0% | |
| ATATTACAGGAAGCAGGGCC+TGG | + | chr7_2:10100444-10100463 | Msa1048400:intron | 50.0% | |
| CTAGCTGGAGGTGGAACATT+TGG | + | chr7_2:10100471-10100490 | Msa1048400:CDS | 50.0% | |
| GTGGCAATGGATGCTAGCAA+TGG | + | chr7_2:10100597-10100616 | Msa1048400:CDS | 50.0% | |
| GGCTAGAGCAACTCCAACTG+TGG | + | chr7_2:10098041-10098060 | Msa1048400:CDS | 55.0% | |
| GGTTCCATTGTCGCGATCCA+AGG | - | chr7_2:10099459-10099478 | None:intergenic | 55.0% | |
| TACAACATCTGGAGGGTGGG+TGG | + | chr7_2:10100578-10100597 | Msa1048400:CDS | 55.0% | |
| TGCTACACTAACAGGGCCAC+TGG | - | chr7_2:10100667-10100686 | None:intergenic | 55.0% | |
| GAATCGGCCAGTTCACCGGT+TGG | + | chr7_2:10098305-10098324 | Msa1048400:intron | 60.0% | |
| TGGGCCTTGGATCGCGACAA+TGG | + | chr7_2:10099452-10099471 | Msa1048400:CDS | 60.0% | |
| TTACAGGAAGCAGGGCCTGG+TGG | + | chr7_2:10100447-10100466 | Msa1048400:intron | 60.0% | |
| ATCTGGAGGGTGGGTGGCAA+TGG | + | chr7_2:10100584-10100603 | Msa1048400:CDS | 60.0% | |
| CCACCTCCAGCTAGTCCACC+AGG | - | chr7_2:10100465-10100484 | None:intergenic | 65.0% | |
| !! | CCTGGTGGACTAGCTGGAGG+TGG | + | chr7_2:10100462-10100481 | Msa1048400:CDS | 65.0% |
| !! | GCAGGGCCTGGTGGACTAGC+TGG | + | chr7_2:10100456-10100475 | Msa1048400:CDS | 70.0% |
| !! | GGGCCTGGTGGACTAGCTGG+AGG | + | chr7_2:10100459-10100478 | Msa1048400:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 10097557 | 10100908 | 10097557 | ID=Msa1048400;Name=Msa1048400 |
| chr7_2 | mRNA | 10097557 | 10100908 | 10097557 | ID=Msa1048400-mRNA-1;Parent=Msa1048400;Name=Msa1048400-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.33|0|1|1|1|4|0|531 |
| chr7_2 | exon | 10097557 | 10097664 | 10097557 | ID=Msa1048400-mRNA-1:exon:2652;Parent=Msa1048400-mRNA-1 |
| chr7_2 | exon | 10097757 | 10098184 | 10097757 | ID=Msa1048400-mRNA-1:exon:2653;Parent=Msa1048400-mRNA-1 |
| chr7_2 | exon | 10098890 | 10099493 | 10098890 | ID=Msa1048400-mRNA-1:exon:2654;Parent=Msa1048400-mRNA-1 |
| chr7_2 | exon | 10100453 | 10100908 | 10100453 | ID=Msa1048400-mRNA-1:exon:2655;Parent=Msa1048400-mRNA-1 |
| chr7_2 | CDS | 10097557 | 10097664 | 10097557 | ID=Msa1048400-mRNA-1:cds;Parent=Msa1048400-mRNA-1 |
| chr7_2 | CDS | 10097757 | 10098184 | 10097757 | ID=Msa1048400-mRNA-1:cds;Parent=Msa1048400-mRNA-1 |
| chr7_2 | CDS | 10098890 | 10099493 | 10098890 | ID=Msa1048400-mRNA-1:cds;Parent=Msa1048400-mRNA-1 |
| chr7_2 | CDS | 10100453 | 10100908 | 10100453 | ID=Msa1048400-mRNA-1:cds;Parent=Msa1048400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
