AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0700890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0700890 MtrunA17_Chr8g0378741 85.874 446 30 6 14 445 1 427 0.0 748
Msa0700890 MtrunA17_Chr4g0063281 45.455 253 105 4 14 233 1 253 9.94e-63 207
Msa0700890 MtrunA17_Chr7g0237691 42.180 211 91 3 54 233 19 229 9.09e-49 170
Msa0700890 MtrunA17_Chr3g0115161 43.367 196 103 3 47 242 36 223 5.19e-47 164
Msa0700890 MtrunA17_Chr4g0051231 44.324 185 88 3 54 233 46 220 4.59e-46 164
Msa0700890 MtrunA17_Chr1g0148061 40.625 192 94 4 56 244 23 197 1.01e-43 155
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0700890 AT1G68140.1 43.204 206 90 4 32 233 22 204 3.10e-50 174
Msa0700890 AT1G68140.4 43.204 206 90 4 32 233 22 204 3.10e-50 174
Msa0700890 AT1G68140.3 43.204 206 90 4 32 233 22 204 3.10e-50 174
Msa0700890 AT1G68140.2 43.204 206 90 4 32 233 22 204 3.31e-50 173
Msa0700890 AT3G24740.3 41.346 208 92 3 54 233 19 224 3.98e-47 166
Msa0700890 AT3G24740.1 41.346 208 92 3 54 233 19 224 3.98e-47 166
Msa0700890 AT3G24740.5 41.346 208 92 3 54 233 19 224 3.98e-47 166
Msa0700890 AT3G24740.6 41.346 208 92 3 54 233 19 224 3.98e-47 166
Msa0700890 AT3G24740.2 41.346 208 92 3 54 233 19 224 3.98e-47 166
Msa0700890 AT3G24740.4 41.346 208 92 3 54 233 19 224 3.98e-47 166
Msa0700890 AT4G08460.4 36.620 213 105 2 32 244 20 202 1.28e-44 157
Msa0700890 AT4G08460.1 36.620 213 105 2 32 244 20 202 1.28e-44 157
Msa0700890 AT4G08460.2 36.620 213 105 2 32 244 20 202 1.28e-44 157
Msa0700890 AT4G08460.3 36.620 213 105 2 32 244 20 202 1.28e-44 157
Msa0700890 AT4G31410.1 41.799 189 90 2 56 244 29 197 5.99e-44 156
Msa0700890 AT4G31410.2 41.799 189 90 2 56 244 29 197 5.99e-44 156
Msa0700890 AT4G31410.3 41.799 189 90 2 56 244 29 197 5.99e-44 156
Msa0700890 AT1G77770.1 39.683 189 82 1 54 242 24 180 7.96e-37 136
Msa0700890 AT1G77770.3 39.683 189 82 1 54 242 24 180 8.18e-37 136
Msa0700890 AT1G77770.2 39.683 189 82 1 54 242 24 180 8.18e-37 136
Msa0700890 AT1G80220.1 37.981 208 95 4 32 238 19 193 1.45e-36 135
Msa0700890 AT1G15430.1 37.430 179 80 1 51 229 43 189 6.26e-36 134
Msa0700890 AT1G15430.2 37.430 179 80 1 51 229 43 189 6.26e-36 134
Msa0700890 AT3G25910.1 56.818 88 38 0 146 233 173 260 3.32e-27 112
Msa0700890 AT3G25910.1 51.485 101 44 3 14 114 1 96 4.91e-22 97.8
Msa0700890 AT2G26050.1 37.037 162 61 5 81 240 38 160 1.94e-23 98.6

Find 140 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTCACCTTTATAATATA+TGG 0.200001 4_4:+72061698 None:intergenic
CATCATTTCTTTGGATGATT+TGG 0.208773 4_4:-72061666 Msa0700890:three_prime_UTR
GACCTGCCTAGACCTAATTT+TGG 0.218036 4_4:-72063019 Msa0700890:CDS
CTGTCATGTGATGGCATTCT+AGG 0.252643 4_4:+72062146 None:intergenic
ATCATGTAACATCATTTCTT+TGG 0.265997 4_4:-72061675 Msa0700890:three_prime_UTR
TTCTGAGACGTGTGAGTTCC+AGG 0.270482 4_4:-72062609 Msa0700890:CDS
GATCGCCCTCTTCTAACTTT+TGG 0.272975 4_4:+72063097 None:intergenic
AGCTTATCTGCCCTCTTTGC+CGG 0.288827 4_4:-72062703 Msa0700890:CDS
TATGATTTCTCTGATTAGTA+TGG 0.296233 4_4:+72062069 None:intergenic
TCATCAGCCGATCCAAAATT+AGG 0.307268 4_4:+72063007 None:intergenic
TCGTCCTGTACTGGCATTCT+AGG 0.308700 4_4:+72062323 None:intergenic
CTTTGCCGGGGAGGAATATA+TGG 0.311985 4_4:-72062689 Msa0700890:CDS
TTTCCTTCCATATATTATAA+AGG 0.313781 4_4:-72061705 Msa0700890:three_prime_UTR
GACCAATTCTGTAAGTTGTT+TGG 0.314018 4_4:-72062845 Msa0700890:CDS
CCACATTGGGAGGGGTTCCC+AGG 0.321346 4_4:+72062743 None:intergenic
CACCATGTCGCCTGAGGCTT+TGG 0.321911 4_4:-72062414 Msa0700890:CDS
AGATTGTTGAGAATTATTAT+AGG 0.325072 4_4:-72061956 Msa0700890:CDS
CGTGAAATTTACTCTGTTGA+AGG 0.340333 4_4:-72062380 Msa0700890:CDS
AACCAAACAACTTACAGAAT+TGG 0.341143 4_4:+72062843 None:intergenic
CAAAGGTTGGATAGAATATA+TGG 0.344974 4_4:+72061542 None:intergenic
TCTTCGTCTAGAAGGATTCC+TGG 0.365511 4_4:-72061849 Msa0700890:CDS
GCAACAATTCTTCGTCTAGA+AGG 0.368682 4_4:-72061857 Msa0700890:CDS
TGAGGAATTTCCATGCAAAT+AGG 0.372859 4_4:+72062956 None:intergenic
GATTGTTGAGAATTATTATA+GGG 0.372981 4_4:-72061955 Msa0700890:CDS
CTAGCATGCTTCCGAAGTTC+TGG 0.373276 4_4:+72062578 None:intergenic
GGGAGGAATATATGGATATA+TGG 0.377337 4_4:-72062681 Msa0700890:CDS
ATTCTGATGGACAAAATATC+TGG 0.378474 4_4:-72061759 Msa0700890:three_prime_UTR
TTGCAGCTTGCTCCCACATT+GGG 0.386248 4_4:+72062730 None:intergenic
GCTTATCTGCCCTCTTTGCC+GGG 0.394644 4_4:-72062702 Msa0700890:CDS
ACATGTGCAATACCAGTTAC+AGG 0.404371 4_4:-72062883 Msa0700890:CDS
GATCAAACATTTCGCCTTCA+AGG 0.419238 4_4:-72061992 Msa0700890:CDS
ACAGTTGGAGTGCCTGTAAC+TGG 0.422118 4_4:+72062871 None:intergenic
GTTGCAGCTTGCTCCCACAT+TGG 0.424476 4_4:+72062729 None:intergenic
GCTTGCTCCCACATTGGGAG+GGG 0.424566 4_4:+72062735 None:intergenic
AATACACCCAATGCCGTTGC+TGG 0.425129 4_4:+72062269 None:intergenic
CAAGAACAGTCTCTCATGAT+AGG 0.427443 4_4:-72062781 Msa0700890:CDS
CTGTTGAAGGCAACACTGAC+TGG 0.428366 4_4:-72062367 Msa0700890:CDS
GTTGAAGATGTTCTGACCCT+GGG 0.432531 4_4:+72061924 None:intergenic
CAGCTTGCTCCCACATTGGG+AGG 0.432690 4_4:+72062733 None:intergenic
CAAAGAGGGCAGATAAGCTT+TGG 0.436235 4_4:+72062707 None:intergenic
CACATGCCAGCAACGGCATT+GGG 0.446199 4_4:-72062275 Msa0700890:CDS
TAATCTCTCATCAGCAATGC+TGG 0.447552 4_4:-72062819 Msa0700890:CDS
TTTCTTTGGATGATTTGGTT+CGG 0.454919 4_4:-72061661 Msa0700890:three_prime_UTR
AGGAAAGCTCAGTCAGAGCC+TGG 0.456396 4_4:-72062761 Msa0700890:CDS
GAAGTTCTGGATATGTGCCC+TGG 0.457469 4_4:+72062591 None:intergenic
CATTTGCGTTGGCGCAATCA+AGG 0.461043 4_4:-72061822 Msa0700890:CDS
AGCTTGCTCCCACATTGGGA+GGG 0.461937 4_4:+72062734 None:intergenic
CGGCTGATGAAATGAAAGAA+TGG 0.463244 4_4:-72062994 Msa0700890:CDS
TTCAGAAGAACAGTGTTATG+AGG 0.469509 4_4:+72062938 None:intergenic
TGTTGAAGATGTTCTGACCC+TGG 0.476149 4_4:+72061923 None:intergenic
TGACTGTGAGGCATCCTTGA+AGG 0.477107 4_4:+72061978 None:intergenic
AATGTTTGATCTCCTCCATC+TGG 0.477364 4_4:+72062004 None:intergenic
CAGAACTTCGGAAGCATGCT+AGG 0.478633 4_4:-72062577 Msa0700890:CDS
TCAGACCATTCGTCCTGTAC+TGG 0.478756 4_4:+72062314 None:intergenic
ATCCGTCACGTCAGTATGAC+TGG 0.478839 4_4:-72062520 Msa0700890:CDS
TTGCTCCGGGGATTAGTATG+AGG 0.480173 4_4:+72061876 None:intergenic
TGAAAGAATGGGATGATACT+AGG 0.484698 4_4:-72062982 Msa0700890:CDS
AGACGAAGAATTGTTGCTCC+GGG 0.485667 4_4:+72061863 None:intergenic
ATCTCCTCCATCTGGCCATA+CGG 0.487420 4_4:+72062012 None:intergenic
CACGTCAGTATGACTGGCTT+AGG 0.489771 4_4:-72062514 Msa0700890:CDS
ACTTCGGAAGCATGCTAGGC+TGG 0.496290 4_4:-72062573 Msa0700890:CDS
GAAATGTTCTTCTTATGAGA+AGG 0.497789 4_4:-72062918 Msa0700890:CDS
AAATCGTCAACTTCAAAGGT+TGG 0.498041 4_4:+72061529 None:intergenic
CTGTTGAAGAGGACACTGAC+TGG 0.499351 4_4:-72062199 Msa0700890:CDS
ATCCACTGCAATCTATAGAC+GGG 0.499760 4_4:+72063074 None:intergenic
TAGACGAAGAATTGTTGCTC+CGG 0.501598 4_4:+72061862 None:intergenic
ATCAATGCAAGTTCTGATGC+AGG 0.502570 4_4:-72062452 Msa0700890:CDS
TAACTGGTATTGCACATGTA+AGG 0.507897 4_4:+72062887 None:intergenic
AATCAGAGAAATCATAGAGC+TGG 0.517760 4_4:-72062062 Msa0700890:CDS
GGCAAAATCGTCAACTTCAA+AGG 0.518861 4_4:+72061525 None:intergenic
CGCCAACGCAAATGACTACC+AGG 0.519090 4_4:+72061831 None:intergenic
GTCAGTGTCCTCTTCAACAG+AGG 0.523359 4_4:+72062202 None:intergenic
CAGTTCATATACCTTCGAGC+AGG 0.523725 4_4:+72062650 None:intergenic
AAATGTTCTTCTTATGAGAA+GGG 0.527142 4_4:-72062917 Msa0700890:CDS
TGACTGGCTTAGGATGGAAC+AGG 0.527505 4_4:-72062504 Msa0700890:CDS
GACAAATCCCTCTGTTGAAG+AGG 0.528060 4_4:-72062210 Msa0700890:CDS
GGCTGATGAAATGAAAGAAT+GGG 0.532713 4_4:-72062993 Msa0700890:CDS
ATCCAAAATTAGGTCTAGGC+AGG 0.539299 4_4:+72063017 None:intergenic
GCCGATCCAAAATTAGGTCT+AGG 0.539538 4_4:+72063013 None:intergenic
TCACCTTTATAATATATGGA+AGG 0.541694 4_4:+72061702 None:intergenic
AGCGGCACTATATATTCTGA+TGG 0.548275 4_4:-72061772 Msa0700890:three_prime_UTR
AAGACAAGGACCAAAGCCTC+AGG 0.548439 4_4:+72062404 None:intergenic
ATATTCCTCCCCGGCAAAGA+GGG 0.551581 4_4:+72062693 None:intergenic
ACAGAATTGGTCAAGACAGT+TGG 0.553443 4_4:+72062856 None:intergenic
TATATAGTGCCGCTCATGGT+AGG 0.554276 4_4:+72061781 None:intergenic
TACTAGGTGTCCTATTTGCA+TGG 0.556087 4_4:-72062966 Msa0700890:CDS
ACTTCTGTTGGTCGAACAGA+AGG 0.556174 4_4:+72062545 None:intergenic
TCAGATCTTCTGTCATGTGA+TGG 0.556270 4_4:+72062137 None:intergenic
TGCGTTGGCGCAATCAAGGA+TGG 0.556290 4_4:-72061818 Msa0700890:CDS
ATCTGCCCTCTTTGCCGGGG+AGG 0.556924 4_4:-72062698 Msa0700890:CDS
CATCAAACCGTATGGCCAGA+TGG 0.560005 4_4:-72062019 Msa0700890:CDS
ATTATAGGGAGGTGATCCCC+AGG 0.566423 4_4:-72061941 Msa0700890:CDS
AAGACCTAGAATGCCAGTAC+AGG 0.568320 4_4:-72062327 Msa0700890:CDS
TTCCTGGTAGTCATTTGCGT+TGG 0.569500 4_4:-72061833 Msa0700890:CDS
TCTGAGACGTGTGAGTTCCA+GGG 0.570045 4_4:-72062608 Msa0700890:CDS
TGTTGAGAATTATTATAGGG+AGG 0.570988 4_4:-72061952 Msa0700890:CDS
CTCAATACACATGCCAGCAA+CGG 0.571505 4_4:-72062282 Msa0700890:CDS
GATCCACTGCAATCTATAGA+CGG 0.572827 4_4:+72063073 None:intergenic
ACACATGCCAGCAACGGCAT+TGG 0.573673 4_4:-72062276 Msa0700890:CDS
GACCAAAGCCTCAGGCGACA+TGG 0.574330 4_4:+72062412 None:intergenic
AATATATGGATATATGGTAT+CGG 0.574652 4_4:-72062675 Msa0700890:CDS
TGAGAGACTGTTCTTGTGAG+AGG 0.578777 4_4:+72062788 None:intergenic
CTGGGAACCCCTCCCAATGT+GGG 0.579374 4_4:-72062742 Msa0700890:CDS
GAAGATCTGAAACTATGCAC+AGG 0.579647 4_4:-72062124 Msa0700890:CDS
AGAATATATAGTGCCGCTCA+TGG 0.581117 4_4:+72061777 None:intergenic
GCTTAGGATGGAACAGGAGA+GGG 0.582897 4_4:-72062498 Msa0700890:CDS
TCAGTATGACTGGCTTAGGA+TGG 0.586046 4_4:-72062510 Msa0700890:CDS
TATATTCCTCCCCGGCAAAG+AGG 0.588855 4_4:+72062692 None:intergenic
CCTGGGAACCCCTCCCAATG+TGG 0.594503 4_4:-72062743 Msa0700890:CDS
TCTGTTATCATCAAACCGTA+TGG 0.599538 4_4:-72062027 Msa0700890:CDS
AGTAAATTTCACGCAAGACA+AGG 0.602544 4_4:+72062390 None:intergenic
AGCCAGTCATACTGACGTGA+CGG 0.602653 4_4:+72062518 None:intergenic
AAGTTCCTCATACTAATCCC+CGG 0.610437 4_4:-72061881 Msa0700890:CDS
GGAAAGCTCAGTCAGAGCCT+GGG 0.610751 4_4:-72062760 Msa0700890:CDS
TATATCCATATATTCCTCCC+CGG 0.613171 4_4:+72062684 None:intergenic
GAATGCCAGTACAGGACGAA+TGG 0.613508 4_4:-72062319 Msa0700890:CDS
AAAATGCCAAAAGTTAGAAG+AGG 0.615473 4_4:-72063103 Msa0700890:CDS
AGGGCACATATCCAGAACTT+CGG 0.616895 4_4:-72062589 Msa0700890:CDS
TCAGTGTCCTCTTCAACAGA+GGG 0.619430 4_4:+72062203 None:intergenic
CTTATCTGCCCTCTTTGCCG+GGG 0.619909 4_4:-72062701 Msa0700890:CDS
AAATGCCAAAAGTTAGAAGA+GGG 0.621615 4_4:-72063102 Msa0700890:CDS
GGCTTAGGATGGAACAGGAG+AGG 0.624851 4_4:-72062499 Msa0700890:CDS
TGGTATTGCACATGTAAGGT+CGG 0.627971 4_4:+72062891 None:intergenic
TATTGTCTGAAACAATACAC+AGG 0.629983 4_4:-72062250 Msa0700890:CDS
CGTGACGGATCTACTTCTGT+TGG 0.634856 4_4:+72062533 None:intergenic
TCCCCGTCTATAGATTGCAG+TGG 0.644333 4_4:-72063076 Msa0700890:CDS
TTCTCAACAATCTGACTGTG+AGG 0.645033 4_4:+72061966 None:intergenic
TGGTATCGGAACCTGCTCGA+AGG 0.647070 4_4:-72062661 Msa0700890:CDS
AGAAGACACCATGTCGCCTG+AGG 0.653878 4_4:-72062420 Msa0700890:CDS
TTGAAGATGTTCTGACCCTG+GGG 0.655818 4_4:+72061925 None:intergenic
ATTCGATAGCCTACCATGAG+CGG 0.673791 4_4:-72061790 Msa0700890:exon
GACGAAGAATTGTTGCTCCG+GGG 0.676645 4_4:+72061864 None:intergenic
CAAACCGTATGGCCAGATGG+AGG 0.687172 4_4:-72062016 Msa0700890:CDS
TGAGGAACTTGTGAAACTCG+AGG 0.687477 4_4:+72061894 None:intergenic
GGGTCAGAACATCTTCAACA+AGG 0.687489 4_4:-72061920 Msa0700890:CDS
TTATAGGGAGGTGATCCCCA+GGG 0.689176 4_4:-72061940 Msa0700890:CDS
AAGATCTGAAACTATGCACA+GGG 0.691379 4_4:-72062123 Msa0700890:CDS
TCCACTGCAATCTATAGACG+GGG 0.695910 4_4:+72063075 None:intergenic
ACAGGGTATCAAATGATACA+CGG 0.702872 4_4:-72062106 Msa0700890:CDS
ATTGTCTGAAACAATACACA+GGG 0.727300 4_4:-72062249 Msa0700890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATAAAAAACTTCT+TGG + chr4_4:72064515-72064534 None:intergenic 10.0%
!!! TTTTTAATTGTTTGTAGATT+TGG - chr4_4:72063091-72063110 Msa0700890:CDS 15.0%
!! AATTTCACCTTTATAATATA+TGG + chr4_4:72064547-72064566 None:intergenic 15.0%
!! AATATAACTGAACTAAAAGT+AGG + chr4_4:72061907-72061926 None:intergenic 20.0%
!!! GTTTTATTTCTTTGTACTTT+AGG - chr4_4:72061948-72061967 Msa0700890:CDS 20.0%
!!! TATTCATAAGGATGTATTTT+TGG - chr4_4:72062353-72062372 Msa0700890:CDS 20.0%
!!! ATTCATAAGGATGTATTTTT+GGG - chr4_4:72062354-72062373 Msa0700890:CDS 20.0%
!! TTATTTGCAGACAATATTTA+AGG + chr4_4:72062607-72062626 None:intergenic 20.0%
!!! AAAAGGTTTGTTTATATTTG+AGG + chr4_4:72062838-72062857 None:intergenic 20.0%
!!! AATGAAAAAGATTGTGTTTT+TGG + chr4_4:72062869-72062888 None:intergenic 20.0%
!! AAGAGTTATAAGACAAAAAA+GGG - chr4_4:72062968-72062987 Msa0700890:CDS 20.0%
!! AATATATGGATATATGGTAT+CGG - chr4_4:72063567-72063586 Msa0700890:intron 20.0%
!! AGATTGTTGAGAATTATTAT+AGG - chr4_4:72064286-72064305 Msa0700890:intron 20.0%
!! GATTGTTGAGAATTATTATA+GGG - chr4_4:72064287-72064306 Msa0700890:intron 20.0%
!! TTTCCTTCCATATATTATAA+AGG - chr4_4:72064537-72064556 Msa0700890:intron 20.0%
!!! TCCTACATTTTGTTTTTTAA+TGG - chr4_4:72064645-72064664 Msa0700890:intron 20.0%
!! TCCATTAAAAAACAAAATGT+AGG + chr4_4:72064649-72064668 None:intergenic 20.0%
! GTAAGACAATCATATTCAAT+GGG + chr4_4:72061578-72061597 None:intergenic 25.0%
! ATTTATACTCTTAACGAATG+AGG + chr4_4:72061801-72061820 None:intergenic 25.0%
!!! TTCTGTTTTTCATTCTGTTA+TGG - chr4_4:72061849-72061868 Msa0700890:CDS 25.0%
!!! TTCATAAGGATGTATTTTTG+GGG - chr4_4:72062355-72062374 Msa0700890:CDS 25.0%
! AACATAAATACAGAACCAAA+AGG + chr4_4:72062444-72062463 None:intergenic 25.0%
! TGTTTGCTTATATTCATTGA+AGG - chr4_4:72062487-72062506 Msa0700890:CDS 25.0%
! CAAGAGTTATAAGACAAAAA+AGG - chr4_4:72062967-72062986 Msa0700890:CDS 25.0%
! CACTGTTATTGAATTATGAT+CGG - chr4_4:72063046-72063065 Msa0700890:CDS 25.0%
!!! TTTGTAGATTTGGTTTTAAG+CGG - chr4_4:72063101-72063120 Msa0700890:CDS 25.0%
! AAATGTTCTTCTTATGAGAA+GGG - chr4_4:72063325-72063344 Msa0700890:intron 25.0%
! GGTATATGAACTGTAAAAAA+AGG - chr4_4:72063602-72063621 Msa0700890:intron 25.0%
! TATGATTTCTCTGATTAGTA+TGG + chr4_4:72064176-72064195 None:intergenic 25.0%
! TCACCTTTATAATATATGGA+AGG + chr4_4:72064543-72064562 None:intergenic 25.0%
! ATCATGTAACATCATTTCTT+TGG - chr4_4:72064567-72064586 Msa0700890:intron 25.0%
GGTAAGACAATCATATTCAA+TGG + chr4_4:72061579-72061598 None:intergenic 30.0%
! TGTCAATTCAAACCCTTTTA+AGG - chr4_4:72061820-72061839 Msa0700890:CDS 30.0%
! GTCAATTCAAACCCTTTTAA+GGG - chr4_4:72061821-72061840 Msa0700890:CDS 30.0%
ACAGAACATTACCCTTAAAA+GGG + chr4_4:72061835-72061854 None:intergenic 30.0%
AACAGAACATTACCCTTAAA+AGG + chr4_4:72061836-72061855 None:intergenic 30.0%
TTATTAAGTATGCTGATCTC+TGG - chr4_4:72061979-72061998 Msa0700890:CDS 30.0%
!!! ATTTTTAGTCATTGCAACAG+CGG - chr4_4:72062250-72062269 Msa0700890:CDS 30.0%
TAACAACGTAGGTATTCATA+AGG - chr4_4:72062341-72062360 Msa0700890:CDS 30.0%
! TTCTATATAGTTGTGCCTTT+TGG - chr4_4:72062426-72062445 Msa0700890:CDS 30.0%
! ATACTAGTTCTTGTATTGCA+TGG - chr4_4:72062536-72062555 Msa0700890:CDS 30.0%
GAAAACTAAAGTTTCAGACT+TGG + chr4_4:72062565-72062584 None:intergenic 30.0%
!!! GAAATTCAGTTTTGAGGTTT+CGG - chr4_4:72062652-72062671 Msa0700890:CDS 30.0%
!!! TGTTTTTGGTGAAGATGAAA+AGG + chr4_4:72062855-72062874 None:intergenic 30.0%
AGTTATAAGACAAAAAAGGG+AGG - chr4_4:72062971-72062990 Msa0700890:CDS 30.0%
GTTATAAGACAAAAAAGGGA+GGG - chr4_4:72062972-72062991 Msa0700890:CDS 30.0%
AAAATGCCAAAAGTTAGAAG+AGG - chr4_4:72063139-72063158 Msa0700890:intron 30.0%
AAATGCCAAAAGTTAGAAGA+GGG - chr4_4:72063140-72063159 Msa0700890:intron 30.0%
!! TTTTTGGAGATGAAAGGATA+GGG + chr4_4:72063199-72063218 None:intergenic 30.0%
!! ATTTTTGGAGATGAAAGGAT+AGG + chr4_4:72063200-72063219 None:intergenic 30.0%
!! TCAAGATTTTTGGAGATGAA+AGG + chr4_4:72063205-72063224 None:intergenic 30.0%
GAAATGTTCTTCTTATGAGA+AGG - chr4_4:72063324-72063343 Msa0700890:intron 30.0%
AACCAAACAACTTACAGAAT+TGG + chr4_4:72063402-72063421 None:intergenic 30.0%
! TATTGTCTGAAACAATACAC+AGG - chr4_4:72063992-72064011 Msa0700890:intron 30.0%
! ATTGTCTGAAACAATACACA+GGG - chr4_4:72063993-72064012 Msa0700890:intron 30.0%
TGTTGAGAATTATTATAGGG+AGG - chr4_4:72064290-72064309 Msa0700890:intron 30.0%
! ATTCTGATGGACAAAATATC+TGG - chr4_4:72064483-72064502 Msa0700890:intron 30.0%
CATCATTTCTTTGGATGATT+TGG - chr4_4:72064576-72064595 Msa0700890:intron 30.0%
!! TTTCTTTGGATGATTTGGTT+CGG - chr4_4:72064581-72064600 Msa0700890:intron 30.0%
CAAAGGTTGGATAGAATATA+TGG + chr4_4:72064703-72064722 None:intergenic 30.0%
!! TGATTTGTTGCATAACTGGT+AGG + chr4_4:72061535-72061554 None:intergenic 35.0%
!! CAGATGATTTGTTGCATAAC+TGG + chr4_4:72061539-72061558 None:intergenic 35.0%
!! TTACCTTTTAGAGAGAGCTT+TGG - chr4_4:72061594-72061613 Msa0700890:three_prime_UTR 35.0%
AATCCAAAGCTCTCTCTAAA+AGG + chr4_4:72061600-72061619 None:intergenic 35.0%
ACTACAACCACTATTGTTGA+CGG + chr4_4:72061717-72061736 None:intergenic 35.0%
!! AGCGGACTTGATATTGATTT+GGG + chr4_4:72061756-72061775 None:intergenic 35.0%
!! TAGCGGACTTGATATTGATT+TGG + chr4_4:72061757-72061776 None:intergenic 35.0%
TCAATATCAAGTCCGCTATT+AGG - chr4_4:72061759-72061778 Msa0700890:three_prime_UTR 35.0%
CAATATCAAGTCCGCTATTA+GGG - chr4_4:72061760-72061779 Msa0700890:three_prime_UTR 35.0%
AATATCAAGTCCGCTATTAG+GGG - chr4_4:72061761-72061780 Msa0700890:three_prime_UTR 35.0%
!! TCATTCTGTTATGGTCTTGT+TGG - chr4_4:72061858-72061877 Msa0700890:CDS 35.0%
! TGTACCGCTATAGTTTTCTA+GGG - chr4_4:72062289-72062308 Msa0700890:CDS 35.0%
ATACCTACGTTGTTAATCCT+AGG + chr4_4:72062336-72062355 None:intergenic 35.0%
!!! AGGATGTATTTTTGGGGTTT+AGG - chr4_4:72062361-72062380 Msa0700890:CDS 35.0%
!!! ATGTATTTTTGGGGTTTAGG+AGG - chr4_4:72062364-72062383 Msa0700890:CDS 35.0%
CACAAGGTACATAAAACACA+AGG + chr4_4:72062633-72062652 None:intergenic 35.0%
CCTCAAAACTGAATTTCACA+AGG + chr4_4:72062649-72062668 None:intergenic 35.0%
! CCTTGTGAAATTCAGTTTTG+AGG - chr4_4:72062646-72062665 Msa0700890:CDS 35.0%
AGGTTTCGGAATCAATTCTA+TGG - chr4_4:72062666-72062685 Msa0700890:CDS 35.0%
TTCTCGCTTAATGTAATGGT+GGG + chr4_4:72062754-72062773 None:intergenic 35.0%
TTTCTCGCTTAATGTAATGG+TGG + chr4_4:72062755-72062774 None:intergenic 35.0%
GCATTTCTCGCTTAATGTAA+TGG + chr4_4:72062758-72062777 None:intergenic 35.0%
CTGAAAAATACACTTGTGCA+TGG - chr4_4:72062777-72062796 Msa0700890:CDS 35.0%
TCTCACATGCAAAAGCAAAA+TGG + chr4_4:72062810-72062829 None:intergenic 35.0%
GTGTATTGCTCAGTTGAATT+AGG - chr4_4:72062944-72062963 Msa0700890:CDS 35.0%
! AGGGAAATGTCATGGTTTTT+AGG - chr4_4:72062991-72063010 Msa0700890:CDS 35.0%
! GGGAAATGTCATGGTTTTTA+GGG - chr4_4:72062992-72063011 Msa0700890:CDS 35.0%
!! GGAAATGTCATGGTTTTTAG+GGG - chr4_4:72062993-72063012 Msa0700890:CDS 35.0%
!! GAAATGTCATGGTTTTTAGG+GGG - chr4_4:72062994-72063013 Msa0700890:CDS 35.0%
GGCTGATGAAATGAAAGAAT+GGG - chr4_4:72063249-72063268 Msa0700890:intron 35.0%
TGAAAGAATGGGATGATACT+AGG - chr4_4:72063260-72063279 Msa0700890:intron 35.0%
TGAGGAATTTCCATGCAAAT+AGG + chr4_4:72063289-72063308 None:intergenic 35.0%
TTCAGAAGAACAGTGTTATG+AGG + chr4_4:72063307-72063326 None:intergenic 35.0%
TAACTGGTATTGCACATGTA+AGG + chr4_4:72063358-72063377 None:intergenic 35.0%
GACCAATTCTGTAAGTTGTT+TGG - chr4_4:72063397-72063416 Msa0700890:intron 35.0%
TATATCCATATATTCCTCCC+CGG + chr4_4:72063561-72063580 None:intergenic 35.0%
GGGAGGAATATATGGATATA+TGG - chr4_4:72063561-72063580 Msa0700890:intron 35.0%
AGTAAATTTCACGCAAGACA+AGG + chr4_4:72063855-72063874 None:intergenic 35.0%
CGTGAAATTTACTCTGTTGA+AGG - chr4_4:72063862-72063881 Msa0700890:intron 35.0%
! AAGATCTGAAACTATGCACA+GGG - chr4_4:72064119-72064138 Msa0700890:intron 35.0%
! ACAGGGTATCAAATGATACA+CGG - chr4_4:72064136-72064155 Msa0700890:intron 35.0%
AATCAGAGAAATCATAGAGC+TGG - chr4_4:72064180-72064199 Msa0700890:intron 35.0%
TCTGTTATCATCAAACCGTA+TGG - chr4_4:72064215-72064234 Msa0700890:intron 35.0%
AAATCGTCAACTTCAAAGGT+TGG + chr4_4:72064716-72064735 None:intergenic 35.0%
TGTCAATCACATCGCTATAG+TGG - chr4_4:72061641-72061660 Msa0700890:three_prime_UTR 40.0%
!! GCGGACTTGATATTGATTTG+GGG + chr4_4:72061755-72061774 None:intergenic 40.0%
! CTGTACCGCTATAGTTTTCT+AGG - chr4_4:72062288-72062307 Msa0700890:CDS 40.0%
! GTACCGCTATAGTTTTCTAG+GGG - chr4_4:72062290-72062309 Msa0700890:CDS 40.0%
! TACCGCTATAGTTTTCTAGG+GGG - chr4_4:72062291-72062310 Msa0700890:CDS 40.0%
CTACCTAGGATTAACAACGT+AGG - chr4_4:72062330-72062349 Msa0700890:CDS 40.0%
AAAAAGGGAGGGAAATGTCA+TGG - chr4_4:72062983-72063002 Msa0700890:CDS 40.0%
ATCCACTGCAATCTATAGAC+GGG + chr4_4:72063171-72063190 None:intergenic 40.0%
GATCCACTGCAATCTATAGA+CGG + chr4_4:72063172-72063191 None:intergenic 40.0%
! TCTAGGCAGGTCAAGATTTT+TGG + chr4_4:72063215-72063234 None:intergenic 40.0%
ATCCAAAATTAGGTCTAGGC+AGG + chr4_4:72063228-72063247 None:intergenic 40.0%
! GCCTAGACCTAATTTTGGAT+CGG - chr4_4:72063228-72063247 Msa0700890:intron 40.0%
TCATCAGCCGATCCAAAATT+AGG + chr4_4:72063238-72063257 None:intergenic 40.0%
CGGCTGATGAAATGAAAGAA+TGG - chr4_4:72063248-72063267 Msa0700890:intron 40.0%
TACTAGGTGTCCTATTTGCA+TGG - chr4_4:72063276-72063295 Msa0700890:intron 40.0%
TGGTATTGCACATGTAAGGT+CGG + chr4_4:72063354-72063373 None:intergenic 40.0%
ACATGTGCAATACCAGTTAC+AGG - chr4_4:72063359-72063378 Msa0700890:intron 40.0%
ACAGAATTGGTCAAGACAGT+TGG + chr4_4:72063389-72063408 None:intergenic 40.0%
TAATCTCTCATCAGCAATGC+TGG - chr4_4:72063423-72063442 Msa0700890:intron 40.0%
CAAGAACAGTCTCTCATGAT+AGG - chr4_4:72063461-72063480 Msa0700890:intron 40.0%
! ATCAATGCAAGTTCTGATGC+AGG - chr4_4:72063790-72063809 Msa0700890:intron 40.0%
TCAGATCTTCTGTCATGTGA+TGG + chr4_4:72064108-72064127 None:intergenic 40.0%
! GAAGATCTGAAACTATGCAC+AGG - chr4_4:72064118-72064137 Msa0700890:intron 40.0%
AATGTTTGATCTCCTCCATC+TGG + chr4_4:72064241-72064260 None:intergenic 40.0%
GATCAAACATTTCGCCTTCA+AGG - chr4_4:72064250-72064269 Msa0700890:intron 40.0%
TTCTCAACAATCTGACTGTG+AGG + chr4_4:72064279-72064298 None:intergenic 40.0%
AAGTTCCTCATACTAATCCC+CGG - chr4_4:72064361-72064380 Msa0700890:intron 40.0%
TAGACGAAGAATTGTTGCTC+CGG + chr4_4:72064383-72064402 None:intergenic 40.0%
GCAACAATTCTTCGTCTAGA+AGG - chr4_4:72064385-72064404 Msa0700890:intron 40.0%
! AGAATATATAGTGCCGCTCA+TGG + chr4_4:72064468-72064487 None:intergenic 40.0%
AGCGGCACTATATATTCTGA+TGG - chr4_4:72064470-72064489 Msa0700890:intron 40.0%
GGCAAAATCGTCAACTTCAA+AGG + chr4_4:72064720-72064739 None:intergenic 40.0%
! GCTATAGTGGAATAGCGTAG+CGG - chr4_4:72061654-72061673 Msa0700890:three_prime_UTR 45.0%
ACAACCACTATTGTTGACGG+TGG + chr4_4:72061714-72061733 None:intergenic 45.0%
GTTGTAGTTGCCGCTAATTG+CGG - chr4_4:72061729-72061748 Msa0700890:three_prime_UTR 45.0%
AAGTCCGCTATTAGGGGTTT+GGG - chr4_4:72061767-72061786 Msa0700890:three_prime_UTR 45.0%
! CTGATCTCTGGTGCCAATTT+CGG - chr4_4:72061991-72062010 Msa0700890:CDS 45.0%
! TGATCTCTGGTGCCAATTTC+GGG - chr4_4:72061992-72062011 Msa0700890:CDS 45.0%
!! GAGCTTGCTCTGGCTTTAAA+CGG - chr4_4:72062114-72062133 Msa0700890:CDS 45.0%
!! AGCTTGCTCTGGCTTTAAAC+GGG - chr4_4:72062115-72062134 Msa0700890:CDS 45.0%
TATAGCGGTACAGCGAATAG+CGG + chr4_4:72062281-72062300 None:intergenic 45.0%
GACCCCCTAGAAAACTATAG+CGG + chr4_4:72062296-72062315 None:intergenic 45.0%
TGTGCTATGCAATGCTACCT+AGG - chr4_4:72062316-72062335 Msa0700890:CDS 45.0%
! CACAAGCGACTTTTCACCTT+CGG - chr4_4:72062718-72062737 Msa0700890:CDS 45.0%
GGTGGGATTTATTGATCCGA+AGG + chr4_4:72062737-72062756 None:intergenic 45.0%
!! TGTCATGGTTTTTAGGGGGT+TGG - chr4_4:72062998-72063017 Msa0700890:CDS 45.0%
! GATCGCCCTCTTCTAACTTT+TGG + chr4_4:72063148-72063167 None:intergenic 45.0%
TCCACTGCAATCTATAGACG+GGG + chr4_4:72063170-72063189 None:intergenic 45.0%
! GACCTGCCTAGACCTAATTT+TGG - chr4_4:72063223-72063242 Msa0700890:intron 45.0%
GCCGATCCAAAATTAGGTCT+AGG + chr4_4:72063232-72063251 None:intergenic 45.0%
TGAGAGACTGTTCTTGTGAG+AGG + chr4_4:72063457-72063476 None:intergenic 45.0%
CAAAGAGGGCAGATAAGCTT+TGG + chr4_4:72063538-72063557 None:intergenic 45.0%
CAGTTCATATACCTTCGAGC+AGG + chr4_4:72063595-72063614 None:intergenic 45.0%
AGGGCACATATCCAGAACTT+CGG - chr4_4:72063653-72063672 Msa0700890:intron 45.0%
ACTTCTGTTGGTCGAACAGA+AGG + chr4_4:72063700-72063719 None:intergenic 45.0%
!! TCAGTATGACTGGCTTAGGA+TGG - chr4_4:72063732-72063751 Msa0700890:intron 45.0%
AAGACCTAGAATGCCAGTAC+AGG - chr4_4:72063915-72063934 Msa0700890:intron 45.0%
CTCAATACACATGCCAGCAA+CGG - chr4_4:72063960-72063979 Msa0700890:intron 45.0%
GACAAATCCCTCTGTTGAAG+AGG - chr4_4:72064032-72064051 Msa0700890:intron 45.0%
TCAGTGTCCTCTTCAACAGA+GGG + chr4_4:72064042-72064061 None:intergenic 45.0%
CTGTCATGTGATGGCATTCT+AGG + chr4_4:72064099-72064118 None:intergenic 45.0%
TTGAAGATGTTCTGACCCTG+GGG + chr4_4:72064320-72064339 None:intergenic 45.0%
GTTGAAGATGTTCTGACCCT+GGG + chr4_4:72064321-72064340 None:intergenic 45.0%
TGTTGAAGATGTTCTGACCC+TGG + chr4_4:72064322-72064341 None:intergenic 45.0%
GGGTCAGAACATCTTCAACA+AGG - chr4_4:72064322-72064341 Msa0700890:intron 45.0%
TGAGGAACTTGTGAAACTCG+AGG + chr4_4:72064351-72064370 None:intergenic 45.0%
AGACGAAGAATTGTTGCTCC+GGG + chr4_4:72064382-72064401 None:intergenic 45.0%
TCTTCGTCTAGAAGGATTCC+TGG - chr4_4:72064393-72064412 Msa0700890:intron 45.0%
TTCCTGGTAGTCATTTGCGT+TGG - chr4_4:72064409-72064428 Msa0700890:intron 45.0%
ATTCGATAGCCTACCATGAG+CGG - chr4_4:72064452-72064471 Msa0700890:intron 45.0%
! TATATAGTGCCGCTCATGGT+AGG + chr4_4:72064464-72064483 None:intergenic 45.0%
!! AAAAATAATAATAATAATGA+GGG + chr4_4:72062915-72062934 None:intergenic 5.0%
!! AAAAAATAATAATAATAATG+AGG + chr4_4:72062916-72062935 None:intergenic 5.0%
! ATAGTGGAATAGCGTAGCGG+TGG - chr4_4:72061657-72061676 Msa0700890:three_prime_UTR 50.0%
! TGATTTGGGGCCGCAATTAG+CGG + chr4_4:72061742-72061761 None:intergenic 50.0%
CAAGTCCGCTATTAGGGGTT+TGG - chr4_4:72061766-72061785 Msa0700890:three_prime_UTR 50.0%
TCGTCCCAAACCCCTAATAG+CGG + chr4_4:72061774-72061793 None:intergenic 50.0%
! GATCTCTGGTGCCAATTTCG+GGG - chr4_4:72061993-72062012 Msa0700890:CDS 50.0%
! ATTCCCTCCGGTGCCAATTT+CGG - chr4_4:72062074-72062093 Msa0700890:CDS 50.0%
TGGACTTAGCCCACCGAAAT+TGG + chr4_4:72062090-72062109 None:intergenic 50.0%
! AGTCCATACAGAGCTTGCTC+TGG - chr4_4:72062104-72062123 Msa0700890:CDS 50.0%
AAGCCAGAGCAAGCTCTGTA+TGG + chr4_4:72062110-72062129 None:intergenic 50.0%
!! GCTTGCTCTGGCTTTAAACG+GGG - chr4_4:72062116-72062135 Msa0700890:CDS 50.0%
AAACTCAATCCGCCCACTTG+CGG + chr4_4:72062146-72062165 None:intergenic 50.0%
GGTGAAAAGTCGCTTGTGCA+TGG + chr4_4:72062716-72062735 None:intergenic 50.0%
TCCCCGTCTATAGATTGCAG+TGG - chr4_4:72063166-72063185 Msa0700890:intron 50.0%
! ACAGTTGGAGTGCCTGTAAC+TGG + chr4_4:72063374-72063393 None:intergenic 50.0%
! TTGCAGCTTGCTCCCACATT+GGG + chr4_4:72063515-72063534 None:intergenic 50.0%
AGCTTATCTGCCCTCTTTGC+CGG - chr4_4:72063539-72063558 Msa0700890:intron 50.0%
ATATTCCTCCCCGGCAAAGA+GGG + chr4_4:72063552-72063571 None:intergenic 50.0%
TATATTCCTCCCCGGCAAAG+AGG + chr4_4:72063553-72063572 None:intergenic 50.0%
CTTTGCCGGGGAGGAATATA+TGG - chr4_4:72063553-72063572 Msa0700890:intron 50.0%
!! TTCTGAGACGTGTGAGTTCC+AGG - chr4_4:72063633-72063652 Msa0700890:intron 50.0%
! TCTGAGACGTGTGAGTTCCA+GGG - chr4_4:72063634-72063653 Msa0700890:intron 50.0%
!! GAAGTTCTGGATATGTGCCC+TGG + chr4_4:72063654-72063673 None:intergenic 50.0%
CTAGCATGCTTCCGAAGTTC+TGG + chr4_4:72063667-72063686 None:intergenic 50.0%
! CAGAACTTCGGAAGCATGCT+AGG - chr4_4:72063665-72063684 Msa0700890:intron 50.0%
!! CGTGACGGATCTACTTCTGT+TGG + chr4_4:72063712-72063731 None:intergenic 50.0%
ATCCGTCACGTCAGTATGAC+TGG - chr4_4:72063722-72063741 Msa0700890:intron 50.0%
AGCCAGTCATACTGACGTGA+CGG + chr4_4:72063727-72063746 None:intergenic 50.0%
!! CACGTCAGTATGACTGGCTT+AGG - chr4_4:72063728-72063747 Msa0700890:intron 50.0%
!! TGACTGGCTTAGGATGGAAC+AGG - chr4_4:72063738-72063757 Msa0700890:intron 50.0%
GCTTAGGATGGAACAGGAGA+GGG - chr4_4:72063744-72063763 Msa0700890:intron 50.0%
AAGACAAGGACCAAAGCCTC+AGG + chr4_4:72063841-72063860 None:intergenic 50.0%
CTGTTGAAGGCAACACTGAC+TGG - chr4_4:72063875-72063894 Msa0700890:intron 50.0%
! TCGTCCTGTACTGGCATTCT+AGG + chr4_4:72063922-72063941 None:intergenic 50.0%
GAATGCCAGTACAGGACGAA+TGG - chr4_4:72063923-72063942 Msa0700890:intron 50.0%
TCAGACCATTCGTCCTGTAC+TGG + chr4_4:72063931-72063950 None:intergenic 50.0%
AATACACCCAATGCCGTTGC+TGG + chr4_4:72063976-72063995 None:intergenic 50.0%
GTCAGTGTCCTCTTCAACAG+AGG + chr4_4:72064043-72064062 None:intergenic 50.0%
CTGTTGAAGAGGACACTGAC+TGG - chr4_4:72064043-72064062 Msa0700890:intron 50.0%
CATCAAACCGTATGGCCAGA+TGG - chr4_4:72064223-72064242 Msa0700890:intron 50.0%
ATCTCCTCCATCTGGCCATA+CGG + chr4_4:72064233-72064252 None:intergenic 50.0%
! TGACTGTGAGGCATCCTTGA+AGG + chr4_4:72064267-72064286 None:intergenic 50.0%
ATTATAGGGAGGTGATCCCC+AGG - chr4_4:72064301-72064320 Msa0700890:intron 50.0%
TTATAGGGAGGTGATCCCCA+GGG - chr4_4:72064302-72064321 Msa0700890:intron 50.0%
! TTGCTCCGGGGATTAGTATG+AGG + chr4_4:72064369-72064388 None:intergenic 50.0%
GACGAAGAATTGTTGCTCCG+GGG + chr4_4:72064381-72064400 None:intergenic 50.0%
! CATTTGCGTTGGCGCAATCA+AGG - chr4_4:72064420-72064439 Msa0700890:intron 50.0%
TGGAATAGCGTAGCGGTGGT+AGG - chr4_4:72061661-72061680 Msa0700890:three_prime_UTR 55.0%
GGAATAGCGTAGCGGTGGTA+GGG - chr4_4:72061662-72061681 Msa0700890:three_prime_UTR 55.0%
CGAGCCACCGTCAACAATAG+TGG - chr4_4:72061707-72061726 Msa0700890:three_prime_UTR 55.0%
! TCTGGTGCCAATTTCGGGGT+TGG - chr4_4:72061997-72062016 Msa0700890:CDS 55.0%
!! CCAATTTCGGGGTTGGCCTA+GGG - chr4_4:72062004-72062023 Msa0700890:CDS 55.0%
!! CAATTTCGGGGTTGGCCTAG+GGG - chr4_4:72062005-72062024 Msa0700890:CDS 55.0%
AAGATCCCAAGCCAACCCCT+AGG + chr4_4:72062023-72062042 None:intergenic 55.0%
!! TAGGGGTTGGCTTGGGATCT+TGG - chr4_4:72062022-72062041 Msa0700890:CDS 55.0%
! CTTGGAGTTTGCTCCTCCAG+AGG - chr4_4:72062040-72062059 Msa0700890:CDS 55.0%
TTTGCTCCTCCAGAGGTCTC+AGG - chr4_4:72062047-72062066 Msa0700890:CDS 55.0%
ATCGAACCTGAGACCTCTGG+AGG + chr4_4:72062056-72062075 None:intergenic 55.0%
GGAATCGAACCTGAGACCTC+TGG + chr4_4:72062059-72062078 None:intergenic 55.0%
GTCTCAGGTTCGATTCCCTC+CGG - chr4_4:72062062-72062081 Msa0700890:CDS 55.0%
TAGCCCACCGAAATTGGCAC+CGG + chr4_4:72062084-72062103 None:intergenic 55.0%
AACTCAATCCGCCCACTTGC+GGG + chr4_4:72062145-72062164 None:intergenic 55.0%
AGGAAAGCTCAGTCAGAGCC+TGG - chr4_4:72063481-72063500 Msa0700890:intron 55.0%
GGAAAGCTCAGTCAGAGCCT+GGG - chr4_4:72063482-72063501 Msa0700890:intron 55.0%
! AGCTTGCTCCCACATTGGGA+GGG + chr4_4:72063511-72063530 None:intergenic 55.0%
! GTTGCAGCTTGCTCCCACAT+TGG + chr4_4:72063516-72063535 None:intergenic 55.0%
GCTTATCTGCCCTCTTTGCC+GGG - chr4_4:72063540-72063559 Msa0700890:intron 55.0%
CTTATCTGCCCTCTTTGCCG+GGG - chr4_4:72063541-72063560 Msa0700890:intron 55.0%
! TGGTATCGGAACCTGCTCGA+AGG - chr4_4:72063581-72063600 Msa0700890:intron 55.0%
! ACTTCGGAAGCATGCTAGGC+TGG - chr4_4:72063669-72063688 Msa0700890:intron 55.0%
GGCTTAGGATGGAACAGGAG+AGG - chr4_4:72063743-72063762 Msa0700890:intron 55.0%
AGAAGACACCATGTCGCCTG+AGG - chr4_4:72063822-72063841 Msa0700890:intron 55.0%
ACACATGCCAGCAACGGCAT+TGG - chr4_4:72063966-72063985 Msa0700890:intron 55.0%
CACATGCCAGCAACGGCATT+GGG - chr4_4:72063967-72063986 Msa0700890:intron 55.0%
CAAACCGTATGGCCAGATGG+AGG - chr4_4:72064226-72064245 Msa0700890:intron 55.0%
CGCCAACGCAAATGACTACC+AGG + chr4_4:72064414-72064433 None:intergenic 55.0%
! TGCGTTGGCGCAATCAAGGA+TGG - chr4_4:72064424-72064443 Msa0700890:intron 55.0%
AGCGTAGCGGTGGTAGGGTT+TGG - chr4_4:72061667-72061686 Msa0700890:three_prime_UTR 60.0%
!! GCCAATTTCGGGGTTGGCCT+AGG - chr4_4:72062003-72062022 Msa0700890:CDS 60.0%
CCCTAGGCCAACCCCGAAAT+TGG + chr4_4:72062007-72062026 None:intergenic 60.0%
!! GTTGGCCTAGGGGTTGGCTT+GGG - chr4_4:72062015-72062034 Msa0700890:CDS 60.0%
! CCACCGAAATTGGCACCGGA+GGG + chr4_4:72062080-72062099 None:intergenic 60.0%
! CCTCCGGTGCCAATTTCGGT+GGG - chr4_4:72062078-72062097 Msa0700890:CDS 60.0%
ACTCAATCCGCCCACTTGCG+GGG + chr4_4:72062144-72062163 None:intergenic 60.0%
CTGGGAACCCCTCCCAATGT+GGG - chr4_4:72063500-72063519 Msa0700890:intron 60.0%
GCTTGCTCCCACATTGGGAG+GGG + chr4_4:72063510-72063529 None:intergenic 60.0%
! CAGCTTGCTCCCACATTGGG+AGG + chr4_4:72063512-72063531 None:intergenic 60.0%
CACCATGTCGCCTGAGGCTT+TGG - chr4_4:72063828-72063847 Msa0700890:intron 60.0%
GACCAAAGCCTCAGGCGACA+TGG + chr4_4:72063833-72063852 None:intergenic 60.0%
!! TTCGGGGTTGGCCTAGGGGT+TGG - chr4_4:72062009-72062028 Msa0700890:CDS 65.0%
!! GGTTGGCCTAGGGGTTGGCT+TGG - chr4_4:72062014-72062033 Msa0700890:CDS 65.0%
! CCCTCCGGTGCCAATTTCGG+TGG - chr4_4:72062077-72062096 Msa0700890:CDS 65.0%
! CCCACCGAAATTGGCACCGG+AGG + chr4_4:72062081-72062100 None:intergenic 65.0%
TCAATCCGCCCACTTGCGGG+GGG + chr4_4:72062142-72062161 None:intergenic 65.0%
CTCAATCCGCCCACTTGCGG+GGG + chr4_4:72062143-72062162 None:intergenic 65.0%
CCACATTGGGAGGGGTTCCC+AGG + chr4_4:72063502-72063521 None:intergenic 65.0%
CCTGGGAACCCCTCCCAATG+TGG - chr4_4:72063499-72063518 Msa0700890:intron 65.0%
ATCTGCCCTCTTTGCCGGGG+AGG - chr4_4:72063544-72063563 Msa0700890:intron 65.0%
TAAACGGGGCCCCCCGCAAG+TGG - chr4_4:72062130-72062149 Msa0700890:CDS 70.0%
AAACGGGGCCCCCCGCAAGT+GGG - chr4_4:72062131-72062150 Msa0700890:CDS 70.0%
! CGGGGCCCCCCGCAAGTGGG+CGG - chr4_4:72062134-72062153 Msa0700890:CDS 85.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 72061525 72064739 72061525 ID=Msa0700890;Name=Msa0700890
chr4_4 mRNA 72061525 72064739 72061525 ID=Msa0700890-mRNA-1;Parent=Msa0700890;Name=Msa0700890-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0.5|0.5|1|1|2|269|455
chr4_4 exon 72061525 72063156 72061525 ID=Msa0700890-mRNA-1:exon:21956;Parent=Msa0700890-mRNA-1
chr4_4 exon 72064735 72064739 72064735 ID=Msa0700890-mRNA-1:exon:21955;Parent=Msa0700890-mRNA-1
chr4_4 CDS 72064735 72064739 72064735 ID=Msa0700890-mRNA-1:cds;Parent=Msa0700890-mRNA-1
chr4_4 CDS 72061794 72063156 72061794 ID=Msa0700890-mRNA-1:cds;Parent=Msa0700890-mRNA-1
chr4_4 three_prime_UTR 72061525 72061793 72061525 ID=Msa0700890-mRNA-1:three_prime_utr;Parent=Msa0700890-mRNA-1
Gene Sequence

>Msa0700890

ATGGAATTTGGTTTTAAGCGGAAACATCACGTCTCAAAAATGCCAAAAGTTAGAAGAGGGCGATCCCCGTCTATAGATTGCAGTGGATCATATCCCTATCCTTTCATCTCCAAAAATCTTGACCTGCCTAGACCTAATTTTGGATCGGCTGATGAAATGAAAGAATGGGATGATACTAGGTGTCCTATTTGCATGGAAATTCCTCATAACACTGTTCTTCTGAAATGTTCTTCTTATGAGAAGGGTTGCCGACCTTACATGTGCAATACCAGTTACAGGCACTCCAACTGTCTTGACCAATTCTGTAAGTTGTTTGGTTCTAATCTCTCATCAGCAATGCTGGAAGCAATTCCTCTCACAAGAACAGTCTCTCATGATAGGAAAGCTCAGTCAGAGCCTGGGAACCCCTCCCAATGTGGGAGCAAGCTGCAACCAAAGCTTATCTGCCCTCTTTGCCGGGGAGGAATATATGGATATATGGTATCGGAACCTGCTCGAAGGTATATGAACTGTAAAAAAAGGAGTTGTTCTTCTGAGACGTGTGAGTTCCAGGGCACATATCCAGAACTTCGGAAGCATGCTAGGCTGGTGCATCCTTCTGTTCGACCAACAGAAGTAGATCCGTCACGTCAGTATGACTGGCTTAGGATGGAACAGGAGAGGGACTTTGAAGATCTTTTTAGCTCAATCAATGCAAGTTCTGATGCAGGATTGAGCAGAGAAGACACCATGTCGCCTGAGGCTTTGGTCCTTGTCTTGCGTGAAATTTACTCTGTTGAAGGCAACACTGACTGGATTGTGTCTAGTGATTCAAGACCTAGAATGCCAGTACAGGACGAATGGTCTGAAGCAATGCACTCAATACACATGCCAGCAACGGCATTGGGTGTATTGTCTGAAACAATACACAGGGTATCAGATGATACACAGACAAATCCCTCTGTTGAAGAGGACACTGACTGGATCATGTCTAATTTGTTTTCTGATTCAATACCTAGAATGCCATCACATGACAGAAGATCTGAAACTATGCACAGGGTATCAAATGATACACGGACAAATCAATCAAACCATACTAATCAGAGAAATCATAGAGCTGGATCGAGAAATGATCTGTTATCATCAAACCGTATGGCCAGATGGAGGAGATCAAACATTTCGCCTTCAAGGATGCCTCACAGTCAGATTGTTGAGAATTATTATAGGGAGGTGATCCCCAGGGTCAGAACATCTTCAACAAGGATGCCTCGAGTTTCACAAGTTCCTCATACTAATCCCCGGAGCAACAATTCTTCGTCTAGAAGGATTCCTGGTAGTCATTTGCGTTGGCGCAATCAAGGATGGTCGACATTCGATAGCCTACCATGA
Protein sequence

>Msa0700890

MEFGFKRKHHVSKMPKVRRGRSPSIDCSGSYPYPFISKNLDLPRPNFGSADEMKEWDDTRCPICMEIPHNTVLLKCSSYEKGCRPYMCNTSYRHSNCLDQFCKLFGSNLSSAMLEAIPLTRTVSHDRKAQSEPGNPSQCGSKLQPKLICPLCRGGIYGYMVSEPARRYMNCKKRSCSSETCEFQGTYPELRKHARLVHPSVRPTEVDPSRQYDWLRMEQERDFEDLFSSINASSDAGLSREDTMSPEALVLVLREIYSVEGNTDWIVSSDSRPRMPVQDEWSEAMHSIHMPATALGVLSETIHRVSDDTQTNPSVEEDTDWIMSNLFSDSIPRMPSHDRRSETMHRVSNDTRTNQSNHTNQRNHRAGSRNDLLSSNRMARWRRSNISPSRMPHSQIVENYYREVIPRVRTSSTRMPRVSQVPHTNPRSNNSSSRRIPGSHLRWRNQGWSTFDSLP*