AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1213860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1213860 MtrunA17_Chr2g0293911 62.500 336 99 7 1 316 1 329 1.03e-118 345
Msa1213860 MtrunA17_Chr4g0068921 83.254 209 18 1 1 209 1 192 9.18e-107 309
Msa1213860 MtrunA17_Chr1g0194301 47.667 300 107 8 17 314 26 277 2.05e-85 258
Msa1213860 MtrunA17_Chr1g0194291 73.333 150 40 0 16 165 13 162 1.26e-82 250
Msa1213860 MtrunA17_Chr4g0068911 99.130 115 1 0 202 316 1 115 4.20e-78 233
Msa1213860 MtrunA17_Chr1g0209661 60.335 179 68 1 19 197 22 197 3.28e-76 236
Msa1213860 MtrunA17_Chr7g0228231 80.000 115 22 1 16 130 7 120 8.69e-65 203
Msa1213860 MtrunA17_Chr6g0450101 78.899 109 23 0 23 131 13 121 4.78e-63 198
Msa1213860 MtrunA17_Chr1g0168661 66.364 110 37 0 20 129 17 126 6.94e-50 166
Msa1213860 MtrunA17_Chr1g0186061 64.286 112 38 1 18 129 16 125 4.13e-48 162
Msa1213860 MtrunA17_Chr5g0410961 55.118 127 55 1 20 146 8 132 6.05e-45 156
Msa1213860 MtrunA17_Chr2g0323411 60.748 107 42 0 20 126 8 114 7.49e-44 152
Msa1213860 MtrunA17_Chr8g0346561 59.829 117 45 1 21 135 9 125 8.90e-44 152
Msa1213860 MtrunA17_Chr2g0327821 56.364 110 48 0 23 132 5 114 1.41e-43 149
Msa1213860 MtrunA17_Chr4g0070611 62.385 109 41 0 24 132 12 120 1.57e-43 151
Msa1213860 MtrunA17_Chr4g0070641 62.385 109 41 0 24 132 12 120 3.20e-43 146
Msa1213860 MtrunA17_Chr7g0275911 62.385 109 41 0 21 129 9 117 5.97e-43 148
Msa1213860 MtrunA17_Chr1g0187761 54.545 121 55 0 20 140 8 128 1.99e-42 147
Msa1213860 MtrunA17_Chr2g0281071 56.757 111 48 0 24 134 13 123 2.12e-42 149
Msa1213860 MtrunA17_Chr3g0121241 63.208 106 39 0 21 126 39 144 2.29e-42 148
Msa1213860 MtrunA17_Chr4g0048511 56.757 111 48 0 24 134 13 123 4.04e-42 149
Msa1213860 MtrunA17_Chr1g0151941 58.333 108 44 1 20 126 8 115 4.23e-42 146
Msa1213860 MtrunA17_Chr4g0039971 56.522 115 50 0 20 134 9 123 4.33e-42 149
Msa1213860 MtrunA17_Chr3g0115821 51.515 132 60 1 20 147 8 139 4.98e-42 148
Msa1213860 MtrunA17_Chr7g0228891 37.799 209 116 3 20 215 8 215 1.60e-41 145
Msa1213860 MtrunA17_Chr5g0395281 54.783 115 52 0 20 134 8 122 1.61e-41 146
Msa1213860 MtrunA17_Chr1g0180391 59.615 104 42 0 23 126 18 121 1.70e-41 144
Msa1213860 MtrunA17_Chr4g0030881 54.783 115 45 1 25 132 8 122 1.74e-41 144
Msa1213860 MtrunA17_Chr4g0068061 44.785 163 81 2 20 182 8 161 2.75e-41 146
Msa1213860 MtrunA17_Chr7g0274581 53.153 111 52 0 20 130 8 118 3.83e-41 142
Msa1213860 MtrunA17_Chr4g0037141 48.718 156 68 2 26 172 14 166 4.58e-41 144
Msa1213860 MtrunA17_Chr7g0217741 53.043 115 54 0 20 134 8 122 4.94e-41 145
Msa1213860 MtrunA17_Chr3g0099131 53.704 108 50 0 23 130 40 147 6.28e-41 149
Msa1213860 MtrunA17_Chr6g0453471 53.913 115 53 0 20 134 8 122 8.76e-41 145
Msa1213860 MtrunA17_Chr1g0167691 36.364 231 135 4 24 251 12 233 9.40e-41 142
Msa1213860 MtrunA17_Chr1g0203411 57.944 107 45 0 24 130 12 118 1.06e-40 144
Msa1213860 MtrunA17_Chr8g0385321 61.386 101 39 0 26 126 14 114 1.45e-40 144
Msa1213860 MtrunA17_Chr8g0387421 54.054 111 51 0 20 130 8 118 1.62e-40 144
Msa1213860 MtrunA17_Chr7g0261281 56.757 111 48 0 20 130 8 118 1.77e-40 142
Msa1213860 MtrunA17_Chr1g0193371 54.310 116 53 0 24 139 12 127 2.11e-40 144
Msa1213860 MtrunA17_Chr3g0110351 53.043 115 54 0 20 134 8 122 2.29e-40 143
Msa1213860 MtrunA17_Chr4g0057031 56.075 107 47 0 20 126 8 114 2.50e-40 142
Msa1213860 MtrunA17_Chr3g0131121 61.386 101 39 0 26 126 14 114 4.35e-40 142
Msa1213860 MtrunA17_Chr5g0434571 53.043 115 54 0 20 134 44 158 4.50e-40 143
Msa1213860 MtrunA17_Chr2g0328771 55.556 108 48 0 24 131 20 127 5.36e-40 142
Msa1213860 MtrunA17_Chr5g0435101 48.760 121 62 0 20 140 7 127 8.35e-40 139
Msa1213860 MtrunA17_Chr2g0330041 55.340 103 46 0 24 126 12 114 9.57e-40 144
Msa1213860 MtrunA17_Chr4g0055981 57.798 109 46 0 24 132 55 163 1.15e-39 139
Msa1213860 MtrunA17_Chr5g0397231 59.406 101 41 0 20 120 8 108 2.00e-39 141
Msa1213860 MtrunA17_Chr3g0080861 55.340 103 46 0 24 126 37 139 2.39e-39 145
Msa1213860 MtrunA17_Chr4g0042671 50.820 122 60 0 20 141 8 129 2.97e-39 142
Msa1213860 MtrunA17_Chr8g0342541 35.345 232 117 5 24 255 12 210 3.06e-39 141
Msa1213860 MtrunA17_Chr1g0203441 51.200 125 59 2 18 141 7 130 3.39e-39 139
Msa1213860 MtrunA17_Chr1g0167661 57.282 103 44 0 24 126 12 114 3.53e-39 138
Msa1213860 MtrunA17_Chr8g0354661 56.311 103 45 0 24 126 37 139 3.64e-39 144
Msa1213860 MtrunA17_Chr2g0311221 56.731 104 45 0 20 123 10 113 4.10e-39 140
Msa1213860 MtrunA17_Chr7g0270891 54.955 111 50 0 24 134 12 122 4.25e-39 141
Msa1213860 MtrunA17_Chr8g0343831 55.963 109 47 1 23 130 7 115 5.17e-39 138
Msa1213860 MtrunA17_Chr4g0032401 54.630 108 49 0 24 131 17 124 6.46e-39 140
Msa1213860 MtrunA17_Chr1g0154031 54.717 106 48 0 24 129 76 181 6.74e-39 142
Msa1213860 MtrunA17_Chr8g0349261 55.963 109 47 1 19 126 8 116 7.21e-39 139
Msa1213860 MtrunA17_Chr4g0044421 56.604 106 46 0 21 126 9 114 8.81e-39 135
Msa1213860 MtrunA17_Chr2g0309911 53.398 103 48 0 24 126 11 113 1.14e-38 139
Msa1213860 MtrunA17_Chr7g0217221 43.791 153 76 3 20 162 8 160 3.76e-38 136
Msa1213860 MtrunA17_Chr1g0193801 54.054 111 51 0 24 134 12 122 4.24e-38 139
Msa1213860 MtrunA17_Chr8g0342521 54.369 103 47 0 24 126 12 114 4.41e-38 138
Msa1213860 MtrunA17_Chr4g0022881 52.727 110 52 0 20 129 8 117 4.41e-38 135
Msa1213860 MtrunA17_Chr4g0022901 56.190 105 46 0 24 128 13 117 7.11e-38 135
Msa1213860 MtrunA17_Chr1g0194951 58.252 103 43 0 24 126 12 114 9.45e-38 137
Msa1213860 MtrunA17_Chr7g0271241 55.172 116 52 0 24 139 12 127 1.01e-37 138
Msa1213860 MtrunA17_Chr4g0022931 55.140 107 48 0 24 130 13 119 1.09e-37 135
Msa1213860 MtrunA17_Chr4g0022891 48.438 128 59 1 20 147 8 128 1.24e-37 134
Msa1213860 MtrunA17_Chr1g0211161 55.556 108 47 1 24 130 13 120 2.30e-37 133
Msa1213860 MtrunA17_Chr3g0092401 49.107 112 57 0 20 131 9 120 2.36e-37 135
Msa1213860 MtrunA17_Chr3g0088461 52.033 123 53 2 7 129 11 127 2.43e-37 136
Msa1213860 MtrunA17_Chr7g0254411 51.402 107 52 0 20 126 8 114 2.78e-37 135
Msa1213860 MtrunA17_Chr2g0323351 55.140 107 48 0 20 126 8 114 2.84e-37 133
Msa1213860 MtrunA17_Chr4g0022911 55.238 105 47 0 24 128 13 117 2.99e-37 134
Msa1213860 MtrunA17_Chr3g0117091 55.556 108 47 1 24 130 12 119 5.52e-37 135
Msa1213860 MtrunA17_Chr4g0060721 50.467 107 53 0 20 126 9 115 7.59e-37 134
Msa1213860 MtrunA17_Chr4g0028311 54.630 108 48 1 20 126 8 115 1.07e-36 134
Msa1213860 MtrunA17_Chr8g0334881 44.915 118 64 1 15 131 1 118 1.96e-36 133
Msa1213860 MtrunA17_Chr6g0453211 53.398 103 48 0 20 122 8 110 2.22e-36 133
Msa1213860 MtrunA17_Chr6g0452271 49.565 115 58 0 20 134 8 122 2.27e-36 133
Msa1213860 MtrunA17_Chr4g0058631 54.630 108 48 1 24 130 12 119 2.32e-36 134
Msa1213860 MtrunA17_Chr6g0470971 54.902 102 46 0 25 126 15 116 7.18e-36 130
Msa1213860 MtrunA17_Chr3g0103281 48.780 123 62 1 23 144 11 133 1.30e-35 131
Msa1213860 MtrunA17_Chr3g0135311 54.630 108 48 1 20 126 8 115 1.58e-35 131
Msa1213860 MtrunA17_Chr8g0342481 52.885 104 48 1 24 126 12 115 2.28e-35 132
Msa1213860 MtrunA17_Chr5g0400821 52.586 116 52 2 20 132 8 123 2.42e-35 130
Msa1213860 MtrunA17_Chr1g0152011 52.586 116 52 2 20 132 8 123 3.81e-35 130
Msa1213860 MtrunA17_Chr5g0417821 48.673 113 58 0 22 134 5 117 7.09e-35 128
Msa1213860 MtrunA17_Chr2g0322521 50.000 116 54 1 15 126 16 131 1.01e-34 130
Msa1213860 MtrunA17_Chr1g0192411 50.000 110 55 0 20 129 8 117 1.08e-34 130
Msa1213860 MtrunA17_Chr2g0327351 53.846 104 47 1 20 122 8 111 2.46e-34 127
Msa1213860 MtrunA17_Chr4g0072751 55.769 104 45 1 20 122 8 111 9.01e-34 126
Msa1213860 MtrunA17_Chr7g0269831 54.206 107 49 0 20 126 8 114 3.99e-33 125
Msa1213860 MtrunA17_Chr4g0054391 54.902 102 45 1 20 120 8 109 4.34e-33 123
Msa1213860 MtrunA17_Chr7g0264641 50.000 108 53 1 20 126 8 115 5.54e-33 122
Msa1213860 MtrunA17_Chr5g0440781 37.143 175 97 4 23 184 11 185 7.08e-33 120
Msa1213860 MtrunA17_Chr5g0441141 37.143 175 97 4 23 184 11 185 1.17e-32 122
Msa1213860 MtrunA17_Chr5g0440761 37.143 175 97 4 23 184 11 185 1.56e-32 121
Msa1213860 MtrunA17_Chr7g0240821 37.853 177 107 1 29 205 6 179 6.07e-32 119
Msa1213860 MtrunA17_Chr8g0360111 53.846 104 48 0 19 122 20 123 3.91e-31 117
Msa1213860 MtrunA17_Chr5g0434931 48.305 118 59 1 9 126 22 137 1.44e-30 116
Msa1213860 MtrunA17_Chr3g0099141 48.315 89 46 0 20 108 36 124 2.75e-30 112
Msa1213860 MtrunA17_Chr6g0487491 48.276 116 51 2 20 126 8 123 3.03e-30 115
Msa1213860 MtrunA17_Chr5g0434831 50.000 108 54 0 19 126 2 109 3.42e-30 113
Msa1213860 MtrunA17_Chr4g0013361 40.517 116 68 1 15 129 1 116 4.10e-30 115
Msa1213860 MtrunA17_Chr7g0220341 45.669 127 59 2 2 126 11 129 5.72e-30 115
Msa1213860 MtrunA17_Chr5g0434911 50.485 103 51 0 24 126 21 123 9.81e-30 114
Msa1213860 MtrunA17_Chr7g0247131 60.759 79 31 0 56 134 10 88 2.59e-29 113
Msa1213860 MtrunA17_Chr7g0228991 50.485 103 51 0 24 126 29 131 3.20e-29 112
Msa1213860 MtrunA17_Chr5g0441131 43.119 109 61 1 22 129 7 115 6.91e-29 109
Msa1213860 MtrunA17_Chr5g0434841 49.074 108 55 0 19 126 15 122 1.17e-28 112
Msa1213860 MtrunA17_Chr5g0401731 36.047 172 98 4 21 192 10 169 1.96e-27 109
Msa1213860 MtrunA17_Chr6g0454921 45.370 108 58 1 13 120 2 108 4.93e-27 105
Msa1213860 MtrunA17_Chr4g0042611 51.852 81 39 0 20 100 8 88 6.99e-27 101
Msa1213860 MtrunA17_Chr7g0238631 44.231 104 57 1 23 126 110 212 6.41e-26 107
Msa1213860 MtrunA17_Chr5g0395221 53.247 77 36 0 24 100 12 88 3.74e-25 96.7
Msa1213860 MtrunA17_Chr2g0294811 53.086 81 38 0 20 100 8 88 5.52e-25 97.4
Msa1213860 MtrunA17_Chr8g0342531 50.000 82 41 0 20 101 8 89 5.53e-25 98.6
Msa1213860 MtrunA17_Chr3g0139671 41.346 104 60 1 23 126 82 184 7.93e-25 105
Msa1213860 MtrunA17_Chr2g0323321 51.765 85 41 0 20 104 7 91 1.17e-24 96.3
Msa1213860 MtrunA17_Chr8g0342511 51.250 80 39 0 20 99 8 87 2.17e-24 95.1
Msa1213860 MtrunA17_Chr6g0460661 39.640 111 66 1 29 139 19 128 3.03e-24 96.7
Msa1213860 MtrunA17_Chr8g0342461 51.948 77 36 1 26 101 14 90 7.83e-24 94.7
Msa1213860 MtrunA17_Chr4g0008551 43.564 101 56 1 26 126 38 137 1.01e-23 99.4
Msa1213860 MtrunA17_Chr5g0429661 35.461 141 89 2 2 141 97 236 1.36e-23 99.4
Msa1213860 MtrunA17_Chr8g0342471 51.948 77 36 1 26 101 14 90 2.06e-23 94.0
Msa1213860 MtrunA17_Chr1g0157731 39.423 104 62 1 23 126 88 190 3.03e-23 100
Msa1213860 MtrunA17_Chr3g0133601 39.091 110 66 1 19 128 30 138 6.45e-23 94.7
Msa1213860 MtrunA17_Chr3g0117511 41.584 101 56 2 21 120 178 276 1.51e-22 97.4
Msa1213860 MtrunA17_Chr4g0053431 41.905 105 60 1 22 126 1 104 1.69e-22 94.7
Msa1213860 MtrunA17_Chr6g0480581 41.509 106 59 2 26 130 4 107 2.49e-22 93.6
Msa1213860 MtrunA17_Chr4g0058991 44.000 100 49 2 24 120 207 302 3.15e-22 96.7
Msa1213860 MtrunA17_Chr6g0460671 29.947 187 112 4 26 209 99 269 6.14e-21 91.7
Msa1213860 MtrunA17_Chr5g0417621 43.299 97 54 1 26 122 134 229 6.65e-21 92.4
Msa1213860 MtrunA17_Chr5g0437321 43.878 98 54 1 23 120 16 112 1.10e-20 90.1
Msa1213860 MtrunA17_Chr4g0042501 42.268 97 55 1 26 122 105 200 2.23e-20 90.9
Msa1213860 MtrunA17_Chr3g0125801 35.659 129 82 1 16 144 6 133 5.28e-20 88.2
Msa1213860 MtrunA17_Chr7g0228531 34.615 130 83 2 18 147 212 339 5.72e-20 89.7
Msa1213860 MtrunA17_Chr7g0229101 57.971 69 29 0 57 125 5 73 6.00e-20 86.3
Msa1213860 MtrunA17_Chr6g0453751 42.857 91 43 2 24 105 20 110 8.48e-20 84.0
Msa1213860 MtrunA17_Chr5g0397841 41.837 98 56 1 23 120 107 203 1.12e-19 89.4
Msa1213860 MtrunA17_Chr5g0425591 40.659 91 53 1 17 106 2 92 1.59e-19 82.0
Msa1213860 MtrunA17_Chr7g0238651 36.283 113 70 1 26 136 7 119 2.38e-19 87.4
Msa1213860 MtrunA17_Chr7g0254261 39.091 110 65 2 26 135 89 196 3.45e-19 87.0
Msa1213860 MtrunA17_Chr3g0093811 49.412 85 42 1 57 140 15 99 5.44e-19 85.1
Msa1213860 MtrunA17_Chr5g0434901 60.000 65 26 0 58 122 7 71 1.10e-18 80.5
Msa1213860 MtrunA17_Chr7g0229131 52.857 70 33 0 57 126 5 74 4.96e-18 80.1
Msa1213860 MtrunA17_Chr5g0416341 37.069 116 72 1 14 129 14 128 6.08e-18 84.0
Msa1213860 MtrunA17_Chr7g0228401 40.860 93 54 1 35 127 288 379 1.24e-17 83.2
Msa1213860 MtrunA17_Chr7g0233061 38.182 110 59 3 26 132 180 283 2.16e-17 81.6
Msa1213860 MtrunA17_Chr7g0228481 27.083 192 137 3 11 202 206 394 1.17e-16 80.1
Msa1213860 MtrunA17_Chr8g0362231 39.640 111 65 2 29 139 25 133 1.48e-16 79.7
Msa1213860 MtrunA17_Chr1g0177901 38.710 93 56 1 35 127 3 94 1.66e-15 74.3
Msa1213860 MtrunA17_Chr1g0193901 40.217 92 53 2 16 105 3 94 1.37e-12 63.5
Msa1213860 MtrunA17_Chr1g0193891 40.217 92 53 2 16 105 3 94 1.37e-12 63.5
Msa1213860 MtrunA17_Chr1g0193871 40.217 92 53 2 16 105 3 94 1.37e-12 63.5
Msa1213860 MtrunA17_Chr1g0193881 40.217 92 53 2 16 105 3 94 1.37e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1213860 AT5G49620.1 76.136 176 40 1 1 174 1 176 1.43e-87 265
Msa1213860 AT3G06490.1 55.172 319 105 9 1 300 1 300 6.10e-85 259
Msa1213860 AT5G49620.2 70.526 190 40 2 1 174 1 190 6.66e-84 256
Msa1213860 AT1G48000.1 72.368 152 42 0 22 173 30 181 2.25e-83 252
Msa1213860 AT2G47190.1 45.333 300 118 6 17 315 13 267 2.16e-80 245
Msa1213860 AT1G68320.1 69.930 143 43 0 23 165 18 160 5.54e-73 227
Msa1213860 AT1G25340.1 66.187 139 47 0 19 157 13 151 9.51e-68 213
Msa1213860 AT3G27810.1 78.182 110 24 0 21 130 17 126 1.25e-63 201
Msa1213860 AT1G25340.2 63.309 139 46 1 19 157 13 146 3.45e-62 199
Msa1213860 AT1G25340.3 63.309 139 46 1 19 157 13 146 1.00e-61 199
Msa1213860 AT5G40350.1 78.302 106 23 0 21 126 14 119 5.68e-61 194
Msa1213860 AT3G01530.1 65.891 129 41 1 1 129 5 130 1.46e-59 190
Msa1213860 AT3G30210.1 56.452 124 54 0 3 126 6 129 1.74e-49 166
Msa1213860 AT3G24310.1 66.055 109 37 0 21 129 15 123 3.10e-49 165
Msa1213860 AT4G13480.1 67.619 105 34 0 25 129 7 111 3.21e-49 165
Msa1213860 AT3G46130.1 58.929 112 46 0 25 136 10 121 4.07e-45 154
Msa1213860 AT5G59780.3 59.091 110 45 0 23 132 7 116 5.64e-45 153
Msa1213860 AT3G02940.2 58.261 115 48 0 20 134 8 122 1.13e-44 155
Msa1213860 AT3G02940.1 58.261 115 48 0 20 134 8 122 2.08e-44 154
Msa1213860 AT3G02940.3 58.261 115 48 0 20 134 8 122 2.08e-44 154
Msa1213860 AT5G54230.1 57.658 111 47 0 24 134 12 122 1.63e-43 152
Msa1213860 AT5G40330.1 38.655 238 109 7 15 237 3 218 1.96e-43 149
Msa1213860 AT3G27810.2 85.135 74 11 0 57 130 4 77 2.46e-43 147
Msa1213860 AT3G13540.1 62.264 106 40 0 21 126 20 125 4.27e-43 149
Msa1213860 AT5G16770.4 52.206 136 63 2 20 153 8 143 5.04e-43 150
Msa1213860 AT5G16770.3 52.206 136 63 2 20 153 8 143 5.04e-43 150
Msa1213860 AT5G16770.1 52.206 136 63 2 20 153 8 143 8.05e-43 150
Msa1213860 AT5G16770.2 52.206 136 63 2 20 153 8 143 8.05e-43 150
Msa1213860 AT4G05100.1 55.172 116 52 0 19 134 8 123 2.67e-42 149
Msa1213860 AT5G15310.4 54.783 115 52 0 20 134 8 122 3.15e-42 146
Msa1213860 AT5G15310.1 54.783 115 52 0 20 134 8 122 3.50e-42 149
Msa1213860 AT4G28110.1 57.009 107 46 0 20 126 8 114 4.22e-42 147
Msa1213860 AT5G15310.2 54.783 115 52 0 20 134 8 122 4.68e-42 148
Msa1213860 AT3G01140.2 52.033 123 59 0 20 142 8 130 5.28e-42 149
Msa1213860 AT5G65230.1 53.226 124 58 0 16 139 4 127 5.94e-42 147
Msa1213860 AT4G21440.1 55.856 111 49 0 24 134 12 122 6.98e-42 148
Msa1213860 AT5G14750.1 55.856 111 49 0 16 126 8 118 1.01e-41 144
Msa1213860 AT4G34990.1 64.356 101 36 0 26 126 14 114 1.04e-41 146
Msa1213860 AT1G16490.1 57.944 107 45 0 20 126 10 116 1.04e-41 146
Msa1213860 AT3G01140.1 50.388 129 64 0 14 142 45 173 1.08e-41 149
Msa1213860 AT5G35550.1 63.462 104 38 0 23 126 13 116 2.03e-41 145
Msa1213860 AT4G12350.1 40.212 189 101 3 20 208 8 184 3.02e-41 145
Msa1213860 AT1G06180.1 44.311 167 92 1 20 186 8 173 3.68e-41 144
Msa1213860 AT3G53200.1 60.377 106 42 0 21 126 6 111 3.96e-41 143
Msa1213860 AT5G07690.1 57.692 104 44 0 24 127 12 115 3.98e-41 146
Msa1213860 AT1G34670.1 50.000 134 66 1 20 153 8 140 4.56e-41 147
Msa1213860 AT3G23250.1 57.944 107 45 0 20 126 8 114 5.39e-41 144
Msa1213860 AT1G18570.1 59.434 106 43 0 21 126 10 115 6.63e-41 146
Msa1213860 AT5G10280.1 54.783 115 52 0 20 134 8 122 7.01e-41 145
Msa1213860 AT2G31180.1 57.522 113 47 1 20 131 8 120 7.96e-41 143
Msa1213860 AT1G22640.1 53.719 121 56 0 20 140 8 128 8.47e-41 143
Msa1213860 AT4G22680.1 51.667 120 58 0 20 139 8 127 1.06e-40 143
Msa1213860 AT2G47460.1 58.879 107 44 0 20 126 8 114 1.37e-40 145
Msa1213860 AT5G14340.1 55.652 115 51 0 20 134 20 134 1.45e-40 143
Msa1213860 AT1G57560.1 60.194 103 41 0 24 126 12 114 1.51e-40 144
Msa1213860 AT5G40350.2 85.714 70 10 0 57 126 5 74 1.54e-40 139
Msa1213860 AT1G57560.2 60.194 103 41 0 24 126 12 114 1.58e-40 143
Msa1213860 AT4G26930.1 36.207 232 127 3 24 234 19 250 2.86e-40 145
Msa1213860 AT4G38620.1 61.386 101 39 0 26 126 14 114 3.30e-40 142
Msa1213860 AT1G56160.1 57.009 107 46 0 20 126 10 116 3.42e-40 142
Msa1213860 AT5G60890.1 46.853 143 75 1 21 162 9 151 3.83e-40 142
Msa1213860 AT1G09540.1 54.310 116 53 0 24 139 12 127 4.30e-40 144
Msa1213860 AT3G13890.2 52.336 107 51 0 20 126 8 114 6.08e-40 144
Msa1213860 AT1G79180.1 54.054 111 51 0 20 130 10 120 6.90e-40 142
Msa1213860 AT2G16720.1 60.396 101 40 0 26 126 14 114 7.71e-40 141
Msa1213860 AT1G35515.1 56.075 107 47 0 20 126 8 114 9.35e-40 139
Msa1213860 AT4G09460.1 60.396 101 40 0 26 126 14 114 1.07e-39 139
Msa1213860 AT5G07700.1 56.311 103 45 0 24 126 12 114 1.13e-39 142
Msa1213860 AT5G07700.2 56.311 103 45 0 24 126 12 114 1.13e-39 142
Msa1213860 AT3G47600.1 51.282 117 55 1 20 134 8 124 1.38e-39 142
Msa1213860 AT5G16600.1 52.174 115 55 0 20 134 8 122 1.45e-39 142
Msa1213860 AT1G66230.1 51.304 115 56 0 20 134 8 122 2.08e-39 140
Msa1213860 AT3G27920.1 52.500 120 54 1 18 137 8 124 2.11e-39 139
Msa1213860 AT5G26660.1 54.955 111 50 0 24 134 12 122 2.30e-39 142
Msa1213860 AT5G49330.1 57.944 107 45 0 20 126 8 114 2.80e-39 141
Msa1213860 AT5G61420.2 56.311 103 45 0 24 126 12 114 2.85e-39 142
Msa1213860 AT1G63910.1 54.054 111 51 0 20 130 8 118 2.90e-39 142
Msa1213860 AT3G61250.1 56.075 107 47 0 20 126 8 114 3.10e-39 140
Msa1213860 AT3G62610.1 57.009 107 46 0 20 126 8 114 3.11e-39 141
Msa1213860 AT3G11440.2 53.398 103 48 0 24 126 41 143 3.49e-39 144
Msa1213860 AT5G52600.1 55.046 109 49 0 18 126 6 114 1.33e-38 135
Msa1213860 AT2G26960.1 48.780 123 57 1 7 129 9 125 1.52e-38 141
Msa1213860 AT5G06100.1 53.271 107 50 0 20 126 28 134 1.97e-38 141
Msa1213860 AT3G11440.3 53.398 103 48 0 24 126 41 143 2.11e-38 143
Msa1213860 AT3G11440.4 53.398 103 48 0 24 126 41 143 2.11e-38 143
Msa1213860 AT3G11440.1 53.398 103 48 0 24 126 41 143 2.11e-38 143
Msa1213860 AT3G12720.1 52.427 103 49 0 24 126 22 124 4.08e-38 137
Msa1213860 AT5G55020.1 53.271 107 50 0 24 130 26 132 4.99e-38 141
Msa1213860 AT2G32460.2 53.398 103 48 0 24 126 6 108 6.66e-38 140
Msa1213860 AT2G32460.1 53.398 103 48 0 24 126 18 120 6.73e-38 140
Msa1213860 AT5G06100.5 49.167 120 61 0 7 126 15 134 7.08e-38 141
Msa1213860 AT5G06100.2 49.167 120 61 0 7 126 15 134 7.08e-38 141
Msa1213860 AT5G06100.3 49.167 120 61 0 7 126 15 134 7.08e-38 141
Msa1213860 AT5G06100.4 49.167 120 61 0 7 126 15 134 7.08e-38 141
Msa1213860 AT1G74080.1 56.311 103 45 0 24 126 12 114 8.32e-38 137
Msa1213860 AT5G62320.1 48.872 133 61 1 20 145 9 141 9.58e-38 135
Msa1213860 AT5G62470.2 50.000 112 56 0 20 131 8 119 1.40e-37 137
Msa1213860 AT3G08500.1 56.604 106 46 0 24 129 30 135 1.87e-37 137
Msa1213860 AT5G12870.1 51.852 108 52 0 24 131 18 125 1.92e-37 135
Msa1213860 AT4G17785.2 54.955 111 50 0 24 134 13 123 1.96e-37 137
Msa1213860 AT4G17785.1 54.955 111 50 0 24 134 13 123 2.60e-37 137
Msa1213860 AT4G37780.1 54.310 116 50 2 20 132 8 123 2.70e-37 135
Msa1213860 AT1G08810.1 47.899 119 62 0 20 138 8 126 3.18e-37 134
Msa1213860 AT1G74650.1 51.402 107 52 0 20 126 8 114 4.26e-37 135
Msa1213860 AT3G13890.1 48.276 116 51 1 20 126 8 123 5.58e-37 136
Msa1213860 AT4G01680.3 56.311 103 45 0 24 126 12 114 6.39e-37 132
Msa1213860 AT4G01680.1 56.311 103 45 0 24 126 12 114 1.45e-36 134
Msa1213860 AT3G28910.1 52.336 107 51 0 20 126 8 114 3.07e-36 133
Msa1213860 AT5G62470.1 50.000 112 55 1 20 131 8 118 1.32e-35 132
Msa1213860 AT4G25560.1 52.941 102 48 0 25 126 11 112 3.35e-35 129
Msa1213860 AT3G48920.1 47.059 119 60 1 8 126 5 120 4.38e-35 128
Msa1213860 AT5G57620.1 52.778 108 50 1 20 126 8 115 4.92e-35 130
Msa1213860 AT1G74430.1 53.704 108 49 1 24 130 12 119 6.32e-35 128
Msa1213860 AT3G12820.1 53.271 107 50 0 20 126 10 116 7.45e-35 127
Msa1213860 AT5G52260.1 52.252 111 53 0 16 126 4 114 8.15e-35 127
Msa1213860 AT5G56110.1 48.780 123 62 1 23 144 11 133 1.01e-34 129
Msa1213860 AT3G28470.1 50.485 103 51 0 20 122 8 110 1.21e-34 129
Msa1213860 AT5G23000.1 51.852 108 51 1 20 126 8 115 1.69e-34 128
Msa1213860 AT3G49690.1 52.778 108 50 1 20 126 8 115 2.10e-34 127
Msa1213860 AT2G36890.1 53.704 108 49 1 20 126 8 115 2.85e-34 127
Msa1213860 AT2G36890.2 53.704 108 49 1 20 126 49 156 5.30e-34 127
Msa1213860 AT5G65790.1 51.724 116 53 2 20 132 8 123 1.11e-33 127
Msa1213860 AT3G46130.3 62.791 86 32 0 51 136 4 89 2.34e-33 122
Msa1213860 AT1G79180.2 41.667 144 51 1 20 130 10 153 3.07e-33 125
Msa1213860 AT4G01680.2 50.435 115 45 1 24 126 12 126 3.86e-33 125
Msa1213860 AT5G59780.2 68.421 76 24 0 57 132 20 95 1.10e-32 120
Msa1213860 AT3G46130.4 66.250 80 27 0 57 136 20 99 1.13e-32 121
Msa1213860 AT3G60460.1 42.609 115 65 1 18 131 5 119 1.14e-32 123
Msa1213860 AT1G66370.1 48.696 115 59 0 19 133 3 117 4.88e-32 120
Msa1213860 AT1G18710.1 49.515 103 52 0 24 126 12 114 9.66e-31 117
Msa1213860 AT3G53200.2 67.143 70 23 0 57 126 9 78 3.04e-29 111
Msa1213860 AT1G66380.1 51.376 109 53 0 18 126 2 110 1.27e-28 107
Msa1213860 AT1G56650.1 53.398 103 48 0 24 126 8 110 6.21e-28 109
Msa1213860 AT5G26660.2 55.422 83 37 0 52 134 9 91 3.21e-27 108
Msa1213860 AT1G66390.1 53.398 103 48 0 24 126 8 110 3.44e-27 107
Msa1213860 AT5G35550.2 63.158 76 28 0 51 126 44 119 3.77e-27 107
Msa1213860 AT5G11050.1 39.831 118 70 1 3 120 82 198 1.24e-25 106
Msa1213860 AT2G26950.1 37.815 119 71 1 9 127 4 119 1.61e-25 105
Msa1213860 AT3G47600.2 57.500 80 32 1 57 134 39 118 1.78e-25 104
Msa1213860 AT3G12820.2 64.179 67 24 0 60 126 2 68 9.36e-25 99.4
Msa1213860 AT5G14750.3 62.687 67 25 0 60 126 18 84 9.75e-25 98.6
Msa1213860 AT3G09370.2 42.308 104 59 1 23 126 132 234 1.47e-24 103
Msa1213860 AT3G09370.2 38.542 96 57 2 26 120 83 177 4.58e-11 63.9
Msa1213860 AT3G09370.1 42.308 104 59 1 23 126 127 229 1.67e-24 103
Msa1213860 AT3G09370.1 38.542 96 57 2 26 120 78 172 4.94e-11 63.9
Msa1213860 AT3G09370.3 42.308 104 59 1 23 126 140 242 1.88e-24 103
Msa1213860 AT3G09370.3 38.542 96 57 2 26 120 91 185 4.34e-11 63.9
Msa1213860 AT5G11510.3 42.308 104 59 1 23 126 78 180 2.53e-24 103
Msa1213860 AT5G11510.1 42.308 104 59 1 23 126 78 180 2.53e-24 103
Msa1213860 AT5G11510.4 42.308 104 59 1 23 126 78 180 2.53e-24 103
Msa1213860 AT5G11510.2 42.308 104 59 1 23 126 78 180 2.75e-24 103
Msa1213860 AT5G11510.5 42.308 104 59 1 23 126 78 180 2.89e-24 103
Msa1213860 AT2G23290.1 42.478 113 64 1 14 126 1 112 3.02e-24 100
Msa1213860 AT5G58850.1 42.857 98 55 1 23 120 102 198 4.93e-24 101
Msa1213860 AT5G02320.1 41.346 104 60 1 23 126 124 226 5.21e-24 102
Msa1213860 AT5G02320.2 41.346 104 60 1 23 126 124 226 5.21e-24 102
Msa1213860 AT5G02320.3 41.346 104 60 1 23 126 64 166 1.10e-23 101
Msa1213860 AT4G18770.1 39.091 110 66 1 24 133 215 323 3.11e-23 99.4
Msa1213860 AT3G27785.1 44.211 95 52 1 26 120 189 282 3.71e-23 99.4
Msa1213860 AT4G32730.5 38.462 104 63 1 23 126 84 186 5.35e-23 100
Msa1213860 AT4G32730.4 38.462 104 63 1 23 126 84 186 5.35e-23 100
Msa1213860 AT4G32730.3 38.462 104 63 1 23 126 84 186 5.35e-23 100
Msa1213860 AT4G32730.2 38.462 104 63 1 23 126 84 186 5.35e-23 100
Msa1213860 AT4G32730.1 38.462 104 63 1 23 126 84 186 6.67e-23 99.8
Msa1213860 AT4G37260.1 39.316 117 65 2 22 138 9 119 2.04e-22 95.9
Msa1213860 AT1G69560.1 38.017 121 71 2 24 144 105 221 6.75e-22 94.7
Msa1213860 AT1G69560.2 38.655 119 69 2 26 144 123 237 7.94e-22 94.7
Msa1213860 AT3G29020.1 40.952 105 61 1 26 130 65 168 8.11e-22 92.4
Msa1213860 AT3G29020.2 40.952 105 61 1 26 130 67 170 9.11e-22 93.6
Msa1213860 AT5G17800.1 41.441 111 58 2 26 130 93 202 1.45e-21 93.6
Msa1213860 AT1G26780.1 42.424 99 56 1 24 122 96 193 2.62e-21 92.0
Msa1213860 AT1G26780.2 42.424 99 56 1 24 122 96 193 2.67e-21 93.2
Msa1213860 AT1G17950.1 41.905 105 60 1 26 130 5 108 2.82e-21 91.3
Msa1213860 AT2G39880.1 38.686 137 78 4 26 160 50 182 8.22e-21 92.0
Msa1213860 AT5G39700.1 37.500 136 81 3 5 137 33 167 9.49e-21 88.6
Msa1213860 AT3G09230.1 42.308 104 59 1 23 126 52 154 1.92e-20 91.3
Msa1213860 AT3G55730.1 40.594 101 59 1 26 126 56 155 2.82e-20 90.9
Msa1213860 AT5G67300.1 39.423 104 62 1 23 126 3 105 2.85e-20 89.7
Msa1213860 AT1G73410.1 43.519 108 54 2 26 130 6 109 3.83e-20 88.2
Msa1213860 AT1G73410.2 42.857 105 59 1 26 130 6 109 1.10e-19 85.9
Msa1213860 AT5G40360.1 32.787 122 81 1 6 127 138 258 1.13e-19 88.6
Msa1213860 AT2G25230.1 40.566 106 59 2 23 125 23 127 1.17e-19 86.7
Msa1213860 AT3G50060.1 38.462 104 63 1 23 126 3 105 1.62e-19 87.4
Msa1213860 AT1G22640.3 54.930 71 32 0 70 140 1 71 2.44e-19 84.7
Msa1213860 AT4G33450.1 36.800 125 72 2 6 130 5 122 5.25e-19 85.1
Msa1213860 AT3G23250.2 61.404 57 22 0 70 126 1 57 1.01e-18 84.0
Msa1213860 AT1G66380.3 53.947 76 35 0 51 126 2 77 4.71e-18 78.6
Msa1213860 AT3G46130.2 63.636 55 20 0 82 136 1 55 6.71e-18 80.9
Msa1213860 AT5G59780.1 66.667 51 17 0 82 132 1 51 7.24e-18 80.1
Msa1213860 AT1G14350.2 40.196 102 60 1 29 130 28 128 8.36e-18 84.0
Msa1213860 AT1G14350.1 40.196 102 60 1 29 130 28 128 8.36e-18 84.0
Msa1213860 AT1G71030.1 39.000 100 60 1 48 147 5 103 1.75e-17 79.7
Msa1213860 AT5G14750.4 57.895 57 24 0 70 126 1 57 2.91e-17 77.8
Msa1213860 AT5G14750.2 57.895 57 24 0 70 126 1 57 2.91e-17 77.8
Msa1213860 AT1G66380.2 47.619 84 44 0 18 101 2 85 3.13e-17 76.6
Msa1213860 AT2G37630.1 35.780 109 68 1 26 132 4 112 3.36e-17 81.6
Msa1213860 AT1G71030.2 42.353 85 49 0 63 147 5 89 5.36e-17 77.8
Msa1213860 AT1G18960.1 33.028 109 70 2 26 134 10 115 1.79e-16 79.0
Msa1213860 AT2G02820.1 36.719 128 68 3 29 148 33 155 2.35e-16 79.7
Msa1213860 AT2G02820.2 33.793 145 83 3 29 165 33 172 2.37e-16 79.7
Msa1213860 AT2G02820.3 36.719 128 68 3 29 148 33 155 3.38e-16 78.6
Msa1213860 AT4G00540.2 36.036 111 67 2 24 131 101 210 5.40e-16 78.6
Msa1213860 AT4G00540.1 36.036 111 67 2 24 131 99 208 9.37e-16 77.8
Msa1213860 AT5G40430.1 36.792 106 62 3 23 125 51 154 2.00e-15 75.1
Msa1213860 AT4G25560.2 57.778 45 19 0 82 126 2 46 1.33e-12 66.6

Find 80 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAGATTCATTTGAGAATA+AGG 0.220030 8_1:+74114487 Msa1213860:CDS
GGTGTCAACATTATCGGATT+TGG 0.250594 8_1:+74114508 Msa1213860:CDS
CCTTAATCTGCAACTCTTAC+CGG 0.284466 8_1:-74113608 None:intergenic
CTTTGCATCCACGTGTTGTT+TGG 0.298239 8_1:-74114689 None:intergenic
ATTTCATTGTCTGTTCTTCC+TGG 0.304702 8_1:-74114164 None:intergenic
TAATAATTTGAATTAGCATT+AGG 0.308302 8_1:-74114575 None:intergenic
GGAGAATCAATGGATGTAAA+AGG 0.315475 8_1:+74112894 Msa1213860:exon
AATAATTTGAATTAGCATTA+GGG 0.316977 8_1:-74114574 None:intergenic
TTCTCATCAACTTAGCTTCT+CGG 0.318392 8_1:+74114604 Msa1213860:CDS
ACCGGTTACCCCAACGAGTA+TGG 0.324396 8_1:-74113705 None:intergenic
AATTCATAGTTTATAGTTGT+TGG 0.330155 8_1:-74114401 None:intergenic
CCACGTGTTGTTTGGCTCCA+TGG 0.354528 8_1:-74114681 None:intergenic
TCCATACTCGTTGGGGTAAC+CGG 0.362765 8_1:+74113704 Msa1213860:CDS
GTGTCAACATTATCGGATTT+GGG 0.369512 8_1:+74114509 Msa1213860:CDS
CACGTCGCATTTGAGTTGTT+TGG 0.369835 8_1:-74114222 None:intergenic
GTTATTATTGTATGAGGTAT+TGG 0.376146 8_1:-74114354 None:intergenic
CAGTTGTGTTGCTGTTCTCT+AGG 0.378658 8_1:-74114460 None:intergenic
TAAAATTCGAAAGTGGCTAT+TGG 0.379550 8_1:+74112873 Msa1213860:five_prime_UTR
GAATAAGGTGTCAACATTAT+CGG 0.381527 8_1:+74114502 Msa1213860:CDS
TCTCGAGCTCCATACTCGTT+GGG 0.385217 8_1:+74113696 Msa1213860:CDS
AGGACACCATGCGCTACCTT+TGG 0.391149 8_1:+74114261 Msa1213860:CDS
GGCTGTGGTGGTGGTGGTAG+TGG 0.399620 8_1:-74114324 None:intergenic
CGGTCCAAGGACCTCTTCTA+AGG 0.411951 8_1:-74112971 None:intergenic
GGTCGCGGTGGCTGTGGTGG+TGG 0.422372 8_1:-74114333 None:intergenic
CGCGGTGGCTGTGGTGGTGG+TGG 0.432814 8_1:-74114330 None:intergenic
GATTGTATCACAAGCCCGTC+TGG 0.440427 8_1:+74114626 Msa1213860:CDS
GCTGCCGTTATTATTGTATG+AGG 0.444415 8_1:-74114360 None:intergenic
CGTGAATAGCAAGCAATTCA+AGG 0.449225 8_1:+74114241 Msa1213860:CDS
ATGTTTCCACGTCTAACATC+GGG 0.453593 8_1:-74113649 None:intergenic
CATCCTCTTCACTACTCATA+AGG 0.460455 8_1:-74112941 None:intergenic
TTCTCGAGCTCCATACTCGT+TGG 0.464638 8_1:+74113695 Msa1213860:CDS
CTACTCATGGCGAAGGTCGT+TGG 0.467670 8_1:+74113027 Msa1213860:CDS
ATTAATGGATTTCCAATCCA+TGG 0.471132 8_1:+74114664 Msa1213860:CDS
AGGTCCTTGGACCGTGGATG+AGG 0.483198 8_1:+74112980 Msa1213860:CDS
GGTATTGGTCGCGGTGGCTG+TGG 0.487246 8_1:-74114339 None:intergenic
ATAATATTTACCAGCAGAGT+TGG 0.487488 8_1:-74113060 None:intergenic
AGTGGCTATTGGAGAATCAA+TGG 0.488345 8_1:+74112884 Msa1213860:exon
CCGGTAAGAGTTGCAGATTA+AGG 0.490055 8_1:+74113608 Msa1213860:CDS
TGTTGTTTGGCTCCATGGAT+TGG 0.498220 8_1:-74114676 None:intergenic
AGTTGTGTTGCTGTTCTCTA+GGG 0.503634 8_1:-74114459 None:intergenic
TCAATGGATGTAAAAGGAAG+AGG 0.504187 8_1:+74112900 Msa1213860:exon
AATACCCTCGCCAACTCTGC+TGG 0.506355 8_1:+74113050 Msa1213860:CDS
ATGAATTACATTGCTACTCA+TGG 0.516533 8_1:+74113014 Msa1213860:CDS
ATTGGTCGCGGTGGCTGTGG+TGG 0.517445 8_1:-74114336 None:intergenic
GGTGGTAGTGGCAGCAGCAG+CGG 0.522004 8_1:-74114312 None:intergenic
GAGTAGTGAAGAGGATGAGA+TGG 0.523912 8_1:+74112947 Msa1213860:CDS
ATATTAGGTCTCAAACGAAC+CGG 0.530231 8_1:+74113589 Msa1213860:intron
CGACTAGCCTCGGCATCCAA+AGG 0.537317 8_1:-74114277 None:intergenic
GATGTTTCCACGTCTAACAT+CGG 0.539759 8_1:-74113650 None:intergenic
AATACCTCATACAATAATAA+CGG 0.542895 8_1:+74114356 Msa1213860:CDS
ATTGTATGAGGTATTGGTCG+CGG 0.543647 8_1:-74114348 None:intergenic
ATACAAATAAAATTCGAAAG+TGG 0.546233 8_1:+74112866 Msa1213860:five_prime_UTR
TGGACCTTAGAAGAGGTCCT+TGG 0.547752 8_1:+74112967 Msa1213860:CDS
TAATAACGGCAGCAAAATGA+CGG 0.557589 8_1:+74114370 Msa1213860:CDS
TGCGCTACCTTTGGATGCCG+AGG 0.557604 8_1:+74114270 Msa1213860:CDS
AAGTCCTCATCCACGGTCCA+AGG 0.564665 8_1:-74112984 None:intergenic
CAACCTTATGAGTAGTGAAG+AGG 0.569142 8_1:+74112938 Msa1213860:CDS
ATTTACCAGCAGAGTTGGCG+AGG 0.570629 8_1:-74113055 None:intergenic
GTATAACTTTGTGTCATATG+TGG 0.578588 8_1:-74114437 None:intergenic
TAGAAGAGGTCCTTGGACCG+TGG 0.586488 8_1:+74112974 Msa1213860:CDS
TACATTGCTACTCATGGCGA+AGG 0.589936 8_1:+74113020 Msa1213860:CDS
CGGCATCCAAAGGTAGCGCA+TGG 0.593311 8_1:-74114267 None:intergenic
CTCCGCCCCGATGTTAGACG+TGG 0.599725 8_1:+74113643 Msa1213860:CDS
CTCGAGCTCCATACTCGTTG+GGG 0.606500 8_1:+74113697 Msa1213860:CDS
AAAATAGCTCAATATTTACC+AGG 0.611015 8_1:+74114146 Msa1213860:CDS
AATAACGGCAGCAAAATGAC+GGG 0.612004 8_1:+74114371 Msa1213860:CDS
GAGAAGCTAAGTTGATGAGA+AGG 0.613417 8_1:-74114602 None:intergenic
CTTGAGAAAACAATCCAGAC+GGG 0.614227 8_1:-74114640 None:intergenic
GAGTAGCAATGTAATTCATG+AGG 0.616394 8_1:-74113010 None:intergenic
CCATGGAGCCAAACAACACG+TGG 0.620461 8_1:+74114681 Msa1213860:CDS
CCTTGAGAAAACAATCCAGA+CGG 0.624342 8_1:-74114641 None:intergenic
GATGAGATGGACCTTAGAAG+AGG 0.635141 8_1:+74112960 Msa1213860:CDS
GTAAGAGTTGCAGATTAAGG+TGG 0.637890 8_1:+74113611 Msa1213860:CDS
AGTAGCAATGTAATTCATGA+GGG 0.639227 8_1:-74113009 None:intergenic
GAGGGTTAAGTCCTCATCCA+CGG 0.648641 8_1:-74112991 None:intergenic
TTTACCAGCAGAGTTGGCGA+GGG 0.653027 8_1:-74113054 None:intergenic
AACAACACGTGGATGCAAAG+TGG 0.658533 8_1:+74114692 Msa1213860:CDS
GTATGAGGTATTGGTCGCGG+TGG 0.702446 8_1:-74114345 None:intergenic
TGTTTCCACGTCTAACATCG+GGG 0.724931 8_1:-74113648 None:intergenic
TTCCACGTCTAACATCGGGG+CGG 0.772697 8_1:-74113645 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAATTTTATTTGTATATAAT+AGG - chr8_1:74112861-74112880 None:intergenic 10.0%
!! CTACAATATAATATAAAATT+CGG + chr8_1:74113465-74113484 Msa1213860:intron 10.0%
!! CTTAAAATTTATATTATTAC+CGG - chr8_1:74113726-74113745 None:intergenic 10.0%
!! TATATTTGTAAAATTTGAAT+TGG - chr8_1:74113839-74113858 None:intergenic 10.0%
!! ACAATGAAATTAAAAATTAT+TGG + chr8_1:74114177-74114196 Msa1213860:CDS 10.0%
!!! GAATTTTATTTGTATATAAT+AGG - chr8_1:74112861-74112880 None:intergenic 10.0%
!! CTACAATATAATATAAAATT+CGG + chr8_1:74113465-74113484 Msa1213860:intron 10.0%
!! CTTAAAATTTATATTATTAC+CGG - chr8_1:74113726-74113745 None:intergenic 10.0%
!! TATATTTGTAAAATTTGAAT+TGG - chr8_1:74113839-74113858 None:intergenic 10.0%
!! ACAATGAAATTAAAAATTAT+TGG + chr8_1:74114177-74114196 Msa1213860:CDS 10.0%
!! GAAAAAAGGAAAAAATAAAA+TGG + chr8_1:74113385-74113404 Msa1213860:intron 15.0%
!!! AACATTAATCATATGATTTT+TGG - chr8_1:74113426-74113445 None:intergenic 15.0%
!! AAATACTAATAGGATTTATA+CGG - chr8_1:74113509-74113528 None:intergenic 15.0%
!! ATCAATTAAAAATAAATGTC+TGG + chr8_1:74113942-74113961 Msa1213860:intron 15.0%
!! TCAATTAAAAATAAATGTCT+GGG + chr8_1:74113943-74113962 Msa1213860:intron 15.0%
!!! TTTTAATTGATTTTTTTTGG+TGG - chr8_1:74113974-74113993 None:intergenic 15.0%
!! ATAATCTTTGTCAAAATTAA+TGG - chr8_1:74114095-74114114 None:intergenic 15.0%
!! AAAGATTATTTGTTTAATGA+TGG + chr8_1:74114106-74114125 Msa1213860:intron 15.0%
!! AATAATTTGAATTAGCATTA+GGG - chr8_1:74114577-74114596 None:intergenic 15.0%
!! TAATAATTTGAATTAGCATT+AGG - chr8_1:74114578-74114597 None:intergenic 15.0%
!! GAAAAAAGGAAAAAATAAAA+TGG + chr8_1:74113385-74113404 Msa1213860:intron 15.0%
!!! AACATTAATCATATGATTTT+TGG - chr8_1:74113426-74113445 None:intergenic 15.0%
!! AAATACTAATAGGATTTATA+CGG - chr8_1:74113509-74113528 None:intergenic 15.0%
!! ATCAATTAAAAATAAATGTC+TGG + chr8_1:74113942-74113961 Msa1213860:intron 15.0%
!! TCAATTAAAAATAAATGTCT+GGG + chr8_1:74113943-74113962 Msa1213860:intron 15.0%
!!! TTTTAATTGATTTTTTTTGG+TGG - chr8_1:74113974-74113993 None:intergenic 15.0%
!! ATAATCTTTGTCAAAATTAA+TGG - chr8_1:74114095-74114114 None:intergenic 15.0%
!! AAAGATTATTTGTTTAATGA+TGG + chr8_1:74114106-74114125 Msa1213860:intron 15.0%
!! AATAATTTGAATTAGCATTA+GGG - chr8_1:74114577-74114596 None:intergenic 15.0%
!! TAATAATTTGAATTAGCATT+AGG - chr8_1:74114578-74114597 None:intergenic 15.0%
!! ATACAAATAAAATTCGAAAG+TGG + chr8_1:74112866-74112885 Msa1213860:five_prime_UTR 20.0%
!! TAATGAAAAGAAGTGATAAA+AGG - chr8_1:74113149-74113168 None:intergenic 20.0%
!! ATATATATTGTGATATGCAT+TGG + chr8_1:74113248-74113267 Msa1213860:intron 20.0%
!! TGAAATTTGTCAATATTCAT+TGG + chr8_1:74113335-74113354 Msa1213860:intron 20.0%
!!! ATTAATCATATGATTTTTGG+TGG - chr8_1:74113423-74113442 None:intergenic 20.0%
!! AATACTAATAGGATTTATAC+GGG - chr8_1:74113508-74113527 None:intergenic 20.0%
!! GACAAAATACAAATACTAAT+AGG - chr8_1:74113519-74113538 None:intergenic 20.0%
!!! TTGCATTCTTTTGTTATATT+AGG + chr8_1:74113574-74113593 Msa1213860:intron 20.0%
!!! AAAGCTCATAAATACATTTT+TGG - chr8_1:74113766-74113785 None:intergenic 20.0%
!!! ATTTTTAATTGATTGATGCA+TGG - chr8_1:74113935-74113954 None:intergenic 20.0%
!! GATTAGAAGAAGAAAATAAT+TGG - chr8_1:74114027-74114046 None:intergenic 20.0%
!! AATACCTCATACAATAATAA+CGG + chr8_1:74114356-74114375 Msa1213860:CDS 20.0%
!! AATTCATAGTTTATAGTTGT+TGG - chr8_1:74114404-74114423 None:intergenic 20.0%
!! ATACAAATAAAATTCGAAAG+TGG + chr8_1:74112866-74112885 Msa1213860:five_prime_UTR 20.0%
!! TAATGAAAAGAAGTGATAAA+AGG - chr8_1:74113149-74113168 None:intergenic 20.0%
!! ATATATATTGTGATATGCAT+TGG + chr8_1:74113248-74113267 Msa1213860:intron 20.0%
!! TGAAATTTGTCAATATTCAT+TGG + chr8_1:74113335-74113354 Msa1213860:intron 20.0%
!!! ATTAATCATATGATTTTTGG+TGG - chr8_1:74113423-74113442 None:intergenic 20.0%
!! AATACTAATAGGATTTATAC+GGG - chr8_1:74113508-74113527 None:intergenic 20.0%
!! GACAAAATACAAATACTAAT+AGG - chr8_1:74113519-74113538 None:intergenic 20.0%
!!! TTGCATTCTTTTGTTATATT+AGG + chr8_1:74113574-74113593 Msa1213860:intron 20.0%
!!! AAAGCTCATAAATACATTTT+TGG - chr8_1:74113766-74113785 None:intergenic 20.0%
!!! ATTTTTAATTGATTGATGCA+TGG - chr8_1:74113935-74113954 None:intergenic 20.0%
!! GATTAGAAGAAGAAAATAAT+TGG - chr8_1:74114027-74114046 None:intergenic 20.0%
!! AATACCTCATACAATAATAA+CGG + chr8_1:74114356-74114375 Msa1213860:CDS 20.0%
!! AATTCATAGTTTATAGTTGT+TGG - chr8_1:74114404-74114423 None:intergenic 20.0%
!! TCAATGGTAATTTAATGGAT+CGG - chr8_1:74113190-74113209 None:intergenic 25.0%
!! GCTTTTCAATGGTAATTTAA+TGG - chr8_1:74113195-74113214 None:intergenic 25.0%
! TCCACATGTATCATATAATA+AGG - chr8_1:74113274-74113293 None:intergenic 25.0%
! ATTCATTGGATATAATTGCT+TGG + chr8_1:74113349-74113368 Msa1213860:intron 25.0%
!!! TTTTTCCTTTTTTCACAAGT+GGG - chr8_1:74113379-74113398 None:intergenic 25.0%
!!! TTTTTTCCTTTTTTCACAAG+TGG - chr8_1:74113380-74113399 None:intergenic 25.0%
!!! ATTTTAAGAGTTTCATATGC+CGG + chr8_1:74113738-74113757 Msa1213860:intron 25.0%
!!! CATAAATACATTTTTGGTTC+CGG - chr8_1:74113760-74113779 None:intergenic 25.0%
! AAAATAGCTCAATATTTACC+AGG + chr8_1:74114146-74114165 Msa1213860:CDS 25.0%
! GTTATTATTGTATGAGGTAT+TGG - chr8_1:74114357-74114376 None:intergenic 25.0%
! ATCAGATTCATTTGAGAATA+AGG + chr8_1:74114487-74114506 Msa1213860:CDS 25.0%
!! ATTGTTTTCTCAAGGATTAA+TGG + chr8_1:74114649-74114668 Msa1213860:CDS 25.0%
!! TCAATGGTAATTTAATGGAT+CGG - chr8_1:74113190-74113209 None:intergenic 25.0%
!! GCTTTTCAATGGTAATTTAA+TGG - chr8_1:74113195-74113214 None:intergenic 25.0%
! TCCACATGTATCATATAATA+AGG - chr8_1:74113274-74113293 None:intergenic 25.0%
! ATTCATTGGATATAATTGCT+TGG + chr8_1:74113349-74113368 Msa1213860:intron 25.0%
!!! TTTTTCCTTTTTTCACAAGT+GGG - chr8_1:74113379-74113398 None:intergenic 25.0%
!!! TTTTTTCCTTTTTTCACAAG+TGG - chr8_1:74113380-74113399 None:intergenic 25.0%
!!! ATTTTAAGAGTTTCATATGC+CGG + chr8_1:74113738-74113757 Msa1213860:intron 25.0%
!!! CATAAATACATTTTTGGTTC+CGG - chr8_1:74113760-74113779 None:intergenic 25.0%
! AAAATAGCTCAATATTTACC+AGG + chr8_1:74114146-74114165 Msa1213860:CDS 25.0%
! GTTATTATTGTATGAGGTAT+TGG - chr8_1:74114357-74114376 None:intergenic 25.0%
! ATCAGATTCATTTGAGAATA+AGG + chr8_1:74114487-74114506 Msa1213860:CDS 25.0%
!! ATTGTTTTCTCAAGGATTAA+TGG + chr8_1:74114649-74114668 Msa1213860:CDS 25.0%
TAAAATTCGAAAGTGGCTAT+TGG + chr8_1:74112873-74112892 Msa1213860:five_prime_UTR 30.0%
AGTAGCAATGTAATTCATGA+GGG - chr8_1:74113012-74113031 None:intergenic 30.0%
ATGAATTACATTGCTACTCA+TGG + chr8_1:74113014-74113033 Msa1213860:CDS 30.0%
ATAATATTTACCAGCAGAGT+TGG - chr8_1:74113063-74113082 None:intergenic 30.0%
ACTCTGCTGGTAAATATTAT+TGG + chr8_1:74113063-74113082 Msa1213860:intron 30.0%
! CTTCTTTTCATTACCACAAA+TGG + chr8_1:74113156-74113175 Msa1213860:intron 30.0%
! TTTTCATTACCACAAATGGA+TGG + chr8_1:74113160-74113179 Msa1213860:intron 30.0%
! GCCTTATTATATGATACATG+TGG + chr8_1:74113270-74113289 Msa1213860:intron 30.0%
!!! AATCATATGATTTTTGGTGG+AGG - chr8_1:74113420-74113439 None:intergenic 30.0%
ATTGATGCATGGATAATGTT+CGG - chr8_1:74113924-74113943 None:intergenic 30.0%
GTATAACTTTGTGTCATATG+TGG - chr8_1:74114440-74114459 None:intergenic 30.0%
! GAATAAGGTGTCAACATTAT+CGG + chr8_1:74114502-74114521 Msa1213860:CDS 30.0%
!! ATTAATGGATTTCCAATCCA+TGG + chr8_1:74114664-74114683 Msa1213860:CDS 30.0%
TAAAATTCGAAAGTGGCTAT+TGG + chr8_1:74112873-74112892 Msa1213860:five_prime_UTR 30.0%
AGTAGCAATGTAATTCATGA+GGG - chr8_1:74113012-74113031 None:intergenic 30.0%
ATGAATTACATTGCTACTCA+TGG + chr8_1:74113014-74113033 Msa1213860:CDS 30.0%
ATAATATTTACCAGCAGAGT+TGG - chr8_1:74113063-74113082 None:intergenic 30.0%
ACTCTGCTGGTAAATATTAT+TGG + chr8_1:74113063-74113082 Msa1213860:intron 30.0%
! CTTCTTTTCATTACCACAAA+TGG + chr8_1:74113156-74113175 Msa1213860:intron 30.0%
! TTTTCATTACCACAAATGGA+TGG + chr8_1:74113160-74113179 Msa1213860:intron 30.0%
! GCCTTATTATATGATACATG+TGG + chr8_1:74113270-74113289 Msa1213860:intron 30.0%
!!! AATCATATGATTTTTGGTGG+AGG - chr8_1:74113420-74113439 None:intergenic 30.0%
ATTGATGCATGGATAATGTT+CGG - chr8_1:74113924-74113943 None:intergenic 30.0%
GTATAACTTTGTGTCATATG+TGG - chr8_1:74114440-74114459 None:intergenic 30.0%
! GAATAAGGTGTCAACATTAT+CGG + chr8_1:74114502-74114521 Msa1213860:CDS 30.0%
!! ATTAATGGATTTCCAATCCA+TGG + chr8_1:74114664-74114683 Msa1213860:CDS 30.0%
GGAGAATCAATGGATGTAAA+AGG + chr8_1:74112894-74112913 Msa1213860:exon 35.0%
TCAATGGATGTAAAAGGAAG+AGG + chr8_1:74112900-74112919 Msa1213860:exon 35.0%
GAGTAGCAATGTAATTCATG+AGG - chr8_1:74113013-74113032 None:intergenic 35.0%
TAGAGAGAAGAGGCTAATTT+AGG - chr8_1:74113092-74113111 None:intergenic 35.0%
!!! CACAAACTTTGGCTTTTCAA+TGG - chr8_1:74113206-74113225 None:intergenic 35.0%
CATTGAAAAGCCAAAGTTTG+TGG + chr8_1:74113204-74113223 Msa1213860:intron 35.0%
AGTCACAAAACCACAAACTT+TGG - chr8_1:74113217-74113236 None:intergenic 35.0%
ATATTAGGTCTCAAACGAAC+CGG + chr8_1:74113589-74113608 Msa1213860:intron 35.0%
CTAATTCAGCTTCACGAAAT+TGG - chr8_1:74113815-74113834 None:intergenic 35.0%
!! TAATGATGGATTGCATCAGA+TGG + chr8_1:74114120-74114139 Msa1213860:intron 35.0%
ATTTCATTGTCTGTTCTTCC+TGG - chr8_1:74114167-74114186 None:intergenic 35.0%
TAATAACGGCAGCAAAATGA+CGG + chr8_1:74114370-74114389 Msa1213860:CDS 35.0%
GTGTCAACATTATCGGATTT+GGG + chr8_1:74114509-74114528 Msa1213860:CDS 35.0%
TTCTCATCAACTTAGCTTCT+CGG + chr8_1:74114604-74114623 Msa1213860:CDS 35.0%
!!! GTGACTCATCTGACATTTTT+TGG + chr8_1:74114714-74114733 Msa1213860:CDS 35.0%
GGAGAATCAATGGATGTAAA+AGG + chr8_1:74112894-74112913 Msa1213860:exon 35.0%
TCAATGGATGTAAAAGGAAG+AGG + chr8_1:74112900-74112919 Msa1213860:exon 35.0%
GAGTAGCAATGTAATTCATG+AGG - chr8_1:74113013-74113032 None:intergenic 35.0%
TAGAGAGAAGAGGCTAATTT+AGG - chr8_1:74113092-74113111 None:intergenic 35.0%
!!! CACAAACTTTGGCTTTTCAA+TGG - chr8_1:74113206-74113225 None:intergenic 35.0%
CATTGAAAAGCCAAAGTTTG+TGG + chr8_1:74113204-74113223 Msa1213860:intron 35.0%
AGTCACAAAACCACAAACTT+TGG - chr8_1:74113217-74113236 None:intergenic 35.0%
ATATTAGGTCTCAAACGAAC+CGG + chr8_1:74113589-74113608 Msa1213860:intron 35.0%
CTAATTCAGCTTCACGAAAT+TGG - chr8_1:74113815-74113834 None:intergenic 35.0%
!! TAATGATGGATTGCATCAGA+TGG + chr8_1:74114120-74114139 Msa1213860:intron 35.0%
ATTTCATTGTCTGTTCTTCC+TGG - chr8_1:74114167-74114186 None:intergenic 35.0%
TAATAACGGCAGCAAAATGA+CGG + chr8_1:74114370-74114389 Msa1213860:CDS 35.0%
GTGTCAACATTATCGGATTT+GGG + chr8_1:74114509-74114528 Msa1213860:CDS 35.0%
TTCTCATCAACTTAGCTTCT+CGG + chr8_1:74114604-74114623 Msa1213860:CDS 35.0%
!!! GTGACTCATCTGACATTTTT+TGG + chr8_1:74114714-74114733 Msa1213860:CDS 35.0%
AGTGGCTATTGGAGAATCAA+TGG + chr8_1:74112884-74112903 Msa1213860:exon 40.0%
CAACCTTATGAGTAGTGAAG+AGG + chr8_1:74112938-74112957 Msa1213860:CDS 40.0%
CATCCTCTTCACTACTCATA+AGG - chr8_1:74112944-74112963 None:intergenic 40.0%
ATCACATAGGTAGAGAGAAG+AGG - chr8_1:74113102-74113121 None:intergenic 40.0%
TCTCTCTACCTATGTGATTG+TGG + chr8_1:74113104-74113123 Msa1213860:intron 40.0%
ATCGGATAACCATCCATTTG+TGG - chr8_1:74113172-74113191 None:intergenic 40.0%
GGATGTAATTGTCTCTAGCT+AGG + chr8_1:74113291-74113310 Msa1213860:intron 40.0%
CCTTAATCTGCAACTCTTAC+CGG - chr8_1:74113611-74113630 None:intergenic 40.0%
GTAAGAGTTGCAGATTAAGG+TGG + chr8_1:74113611-74113630 Msa1213860:CDS 40.0%
ATGTTTCCACGTCTAACATC+GGG - chr8_1:74113652-74113671 None:intergenic 40.0%
GATGTTTCCACGTCTAACAT+CGG - chr8_1:74113653-74113672 None:intergenic 40.0%
CGTGAATAGCAAGCAATTCA+AGG + chr8_1:74114241-74114260 Msa1213860:CDS 40.0%
!! ATTGTATGAGGTATTGGTCG+CGG - chr8_1:74114351-74114370 None:intergenic 40.0%
GCTGCCGTTATTATTGTATG+AGG - chr8_1:74114363-74114382 None:intergenic 40.0%
AATAACGGCAGCAAAATGAC+GGG + chr8_1:74114371-74114390 Msa1213860:CDS 40.0%
! AGTTGTGTTGCTGTTCTCTA+GGG - chr8_1:74114462-74114481 None:intergenic 40.0%
GGTGTCAACATTATCGGATT+TGG + chr8_1:74114508-74114527 Msa1213860:CDS 40.0%
!! GAGAAGCTAAGTTGATGAGA+AGG - chr8_1:74114605-74114624 None:intergenic 40.0%
CTTGAGAAAACAATCCAGAC+GGG - chr8_1:74114643-74114662 None:intergenic 40.0%
CCTTGAGAAAACAATCCAGA+CGG - chr8_1:74114644-74114663 None:intergenic 40.0%
AGTGGCTATTGGAGAATCAA+TGG + chr8_1:74112884-74112903 Msa1213860:exon 40.0%
CAACCTTATGAGTAGTGAAG+AGG + chr8_1:74112938-74112957 Msa1213860:CDS 40.0%
CATCCTCTTCACTACTCATA+AGG - chr8_1:74112944-74112963 None:intergenic 40.0%
ATCACATAGGTAGAGAGAAG+AGG - chr8_1:74113102-74113121 None:intergenic 40.0%
TCTCTCTACCTATGTGATTG+TGG + chr8_1:74113104-74113123 Msa1213860:intron 40.0%
ATCGGATAACCATCCATTTG+TGG - chr8_1:74113172-74113191 None:intergenic 40.0%
GGATGTAATTGTCTCTAGCT+AGG + chr8_1:74113291-74113310 Msa1213860:intron 40.0%
CCTTAATCTGCAACTCTTAC+CGG - chr8_1:74113611-74113630 None:intergenic 40.0%
GTAAGAGTTGCAGATTAAGG+TGG + chr8_1:74113611-74113630 Msa1213860:CDS 40.0%
ATGTTTCCACGTCTAACATC+GGG - chr8_1:74113652-74113671 None:intergenic 40.0%
GATGTTTCCACGTCTAACAT+CGG - chr8_1:74113653-74113672 None:intergenic 40.0%
CGTGAATAGCAAGCAATTCA+AGG + chr8_1:74114241-74114260 Msa1213860:CDS 40.0%
!! ATTGTATGAGGTATTGGTCG+CGG - chr8_1:74114351-74114370 None:intergenic 40.0%
GCTGCCGTTATTATTGTATG+AGG - chr8_1:74114363-74114382 None:intergenic 40.0%
AATAACGGCAGCAAAATGAC+GGG + chr8_1:74114371-74114390 Msa1213860:CDS 40.0%
! AGTTGTGTTGCTGTTCTCTA+GGG - chr8_1:74114462-74114481 None:intergenic 40.0%
GGTGTCAACATTATCGGATT+TGG + chr8_1:74114508-74114527 Msa1213860:CDS 40.0%
!! GAGAAGCTAAGTTGATGAGA+AGG - chr8_1:74114605-74114624 None:intergenic 40.0%
CTTGAGAAAACAATCCAGAC+GGG - chr8_1:74114643-74114662 None:intergenic 40.0%
CCTTGAGAAAACAATCCAGA+CGG - chr8_1:74114644-74114663 None:intergenic 40.0%
GAGTAGTGAAGAGGATGAGA+TGG + chr8_1:74112947-74112966 Msa1213860:CDS 45.0%
GATGAGATGGACCTTAGAAG+AGG + chr8_1:74112960-74112979 Msa1213860:CDS 45.0%
TACATTGCTACTCATGGCGA+AGG + chr8_1:74113020-74113039 Msa1213860:CDS 45.0%
TACGTGCACCACAATCACAT+AGG - chr8_1:74113115-74113134 None:intergenic 45.0%
CCGGTAAGAGTTGCAGATTA+AGG + chr8_1:74113608-74113627 Msa1213860:CDS 45.0%
TGTTTCCACGTCTAACATCG+GGG - chr8_1:74113651-74113670 None:intergenic 45.0%
!! CACGTCGCATTTGAGTTGTT+TGG - chr8_1:74114225-74114244 None:intergenic 45.0%
!! TGAATACGTTCGACTAGCCT+CGG - chr8_1:74114290-74114309 None:intergenic 45.0%
! CAGTTGTGTTGCTGTTCTCT+AGG - chr8_1:74114463-74114482 None:intergenic 45.0%
! CCGTCTGGATTGTTTTCTCA+AGG + chr8_1:74114641-74114660 Msa1213860:CDS 45.0%
! TGTTGTTTGGCTCCATGGAT+TGG - chr8_1:74114679-74114698 None:intergenic 45.0%
! CTTTGCATCCACGTGTTGTT+TGG - chr8_1:74114692-74114711 None:intergenic 45.0%
AACAACACGTGGATGCAAAG+TGG + chr8_1:74114692-74114711 Msa1213860:CDS 45.0%
GAGTAGTGAAGAGGATGAGA+TGG + chr8_1:74112947-74112966 Msa1213860:CDS 45.0%
GATGAGATGGACCTTAGAAG+AGG + chr8_1:74112960-74112979 Msa1213860:CDS 45.0%
TACATTGCTACTCATGGCGA+AGG + chr8_1:74113020-74113039 Msa1213860:CDS 45.0%
TACGTGCACCACAATCACAT+AGG - chr8_1:74113115-74113134 None:intergenic 45.0%
CCGGTAAGAGTTGCAGATTA+AGG + chr8_1:74113608-74113627 Msa1213860:CDS 45.0%
TGTTTCCACGTCTAACATCG+GGG - chr8_1:74113651-74113670 None:intergenic 45.0%
!! CACGTCGCATTTGAGTTGTT+TGG - chr8_1:74114225-74114244 None:intergenic 45.0%
!! TGAATACGTTCGACTAGCCT+CGG - chr8_1:74114290-74114309 None:intergenic 45.0%
! CAGTTGTGTTGCTGTTCTCT+AGG - chr8_1:74114463-74114482 None:intergenic 45.0%
! CCGTCTGGATTGTTTTCTCA+AGG + chr8_1:74114641-74114660 Msa1213860:CDS 45.0%
! TGTTGTTTGGCTCCATGGAT+TGG - chr8_1:74114679-74114698 None:intergenic 45.0%
! CTTTGCATCCACGTGTTGTT+TGG - chr8_1:74114692-74114711 None:intergenic 45.0%
AACAACACGTGGATGCAAAG+TGG + chr8_1:74114692-74114711 Msa1213860:CDS 45.0%
!!! TATTTTTAATTGATTTTTTT+TGG - chr8_1:74113977-74113996 None:intergenic 5.0%
!!! TATTTTTAATTGATTTTTTT+TGG - chr8_1:74113977-74113996 None:intergenic 5.0%
TGGACCTTAGAAGAGGTCCT+TGG + chr8_1:74112967-74112986 Msa1213860:CDS 50.0%
GAGGGTTAAGTCCTCATCCA+CGG - chr8_1:74112994-74113013 None:intergenic 50.0%
TTTACCAGCAGAGTTGGCGA+GGG - chr8_1:74113057-74113076 None:intergenic 50.0%
ATTTACCAGCAGAGTTGGCG+AGG - chr8_1:74113058-74113077 None:intergenic 50.0%
TTCTCGAGCTCCATACTCGT+TGG + chr8_1:74113695-74113714 Msa1213860:CDS 50.0%
TCTCGAGCTCCATACTCGTT+GGG + chr8_1:74113696-74113715 Msa1213860:CDS 50.0%
TCCATACTCGTTGGGGTAAC+CGG + chr8_1:74113704-74113723 Msa1213860:CDS 50.0%
GATTGTATCACAAGCCCGTC+TGG + chr8_1:74114626-74114645 Msa1213860:CDS 50.0%
TGGACCTTAGAAGAGGTCCT+TGG + chr8_1:74112967-74112986 Msa1213860:CDS 50.0%
GAGGGTTAAGTCCTCATCCA+CGG - chr8_1:74112994-74113013 None:intergenic 50.0%
TTTACCAGCAGAGTTGGCGA+GGG - chr8_1:74113057-74113076 None:intergenic 50.0%
ATTTACCAGCAGAGTTGGCG+AGG - chr8_1:74113058-74113077 None:intergenic 50.0%
TTCTCGAGCTCCATACTCGT+TGG + chr8_1:74113695-74113714 Msa1213860:CDS 50.0%
TCTCGAGCTCCATACTCGTT+GGG + chr8_1:74113696-74113715 Msa1213860:CDS 50.0%
TCCATACTCGTTGGGGTAAC+CGG + chr8_1:74113704-74113723 Msa1213860:CDS 50.0%
GATTGTATCACAAGCCCGTC+TGG + chr8_1:74114626-74114645 Msa1213860:CDS 50.0%
CGGTCCAAGGACCTCTTCTA+AGG - chr8_1:74112974-74112993 None:intergenic 55.0%
TAGAAGAGGTCCTTGGACCG+TGG + chr8_1:74112974-74112993 Msa1213860:CDS 55.0%
AAGTCCTCATCCACGGTCCA+AGG - chr8_1:74112987-74113006 None:intergenic 55.0%
CTACTCATGGCGAAGGTCGT+TGG + chr8_1:74113027-74113046 Msa1213860:CDS 55.0%
AATACCCTCGCCAACTCTGC+TGG + chr8_1:74113050-74113069 Msa1213860:CDS 55.0%
GCGCGCCCACTTGTGAAAAA+AGG + chr8_1:74113371-74113390 Msa1213860:intron 55.0%
TTCCACGTCTAACATCGGGG+CGG - chr8_1:74113648-74113667 None:intergenic 55.0%
CTCGAGCTCCATACTCGTTG+GGG + chr8_1:74113697-74113716 Msa1213860:CDS 55.0%
ACCGGTTACCCCAACGAGTA+TGG - chr8_1:74113708-74113727 None:intergenic 55.0%
AGGACACCATGCGCTACCTT+TGG + chr8_1:74114261-74114280 Msa1213860:CDS 55.0%
!! GTATGAGGTATTGGTCGCGG+TGG - chr8_1:74114348-74114367 None:intergenic 55.0%
!! CCACGTGTTGTTTGGCTCCA+TGG - chr8_1:74114684-74114703 None:intergenic 55.0%
CCATGGAGCCAAACAACACG+TGG + chr8_1:74114681-74114700 Msa1213860:CDS 55.0%
CGGTCCAAGGACCTCTTCTA+AGG - chr8_1:74112974-74112993 None:intergenic 55.0%
TAGAAGAGGTCCTTGGACCG+TGG + chr8_1:74112974-74112993 Msa1213860:CDS 55.0%
AAGTCCTCATCCACGGTCCA+AGG - chr8_1:74112987-74113006 None:intergenic 55.0%
CTACTCATGGCGAAGGTCGT+TGG + chr8_1:74113027-74113046 Msa1213860:CDS 55.0%
AATACCCTCGCCAACTCTGC+TGG + chr8_1:74113050-74113069 Msa1213860:CDS 55.0%
GCGCGCCCACTTGTGAAAAA+AGG + chr8_1:74113371-74113390 Msa1213860:intron 55.0%
TTCCACGTCTAACATCGGGG+CGG - chr8_1:74113648-74113667 None:intergenic 55.0%
CTCGAGCTCCATACTCGTTG+GGG + chr8_1:74113697-74113716 Msa1213860:CDS 55.0%
ACCGGTTACCCCAACGAGTA+TGG - chr8_1:74113708-74113727 None:intergenic 55.0%
AGGACACCATGCGCTACCTT+TGG + chr8_1:74114261-74114280 Msa1213860:CDS 55.0%
!! GTATGAGGTATTGGTCGCGG+TGG - chr8_1:74114348-74114367 None:intergenic 55.0%
!! CCACGTGTTGTTTGGCTCCA+TGG - chr8_1:74114684-74114703 None:intergenic 55.0%
CCATGGAGCCAAACAACACG+TGG + chr8_1:74114681-74114700 Msa1213860:CDS 55.0%
AGGTCCTTGGACCGTGGATG+AGG + chr8_1:74112980-74112999 Msa1213860:CDS 60.0%
CGGCATCCAAAGGTAGCGCA+TGG - chr8_1:74114270-74114289 None:intergenic 60.0%
TGCGCTACCTTTGGATGCCG+AGG + chr8_1:74114270-74114289 Msa1213860:CDS 60.0%
!! CGACTAGCCTCGGCATCCAA+AGG - chr8_1:74114280-74114299 None:intergenic 60.0%
AGGTCCTTGGACCGTGGATG+AGG + chr8_1:74112980-74112999 Msa1213860:CDS 60.0%
CGGCATCCAAAGGTAGCGCA+TGG - chr8_1:74114270-74114289 None:intergenic 60.0%
TGCGCTACCTTTGGATGCCG+AGG + chr8_1:74114270-74114289 Msa1213860:CDS 60.0%
!! CGACTAGCCTCGGCATCCAA+AGG - chr8_1:74114280-74114299 None:intergenic 60.0%
CTCCGCCCCGATGTTAGACG+TGG + chr8_1:74113643-74113662 Msa1213860:CDS 65.0%
!! GGTGGTAGTGGCAGCAGCAG+CGG - chr8_1:74114315-74114334 None:intergenic 65.0%
!! GGCTGTGGTGGTGGTGGTAG+TGG - chr8_1:74114327-74114346 None:intergenic 65.0%
ATTGGTCGCGGTGGCTGTGG+TGG - chr8_1:74114339-74114358 None:intergenic 65.0%
!! GGTATTGGTCGCGGTGGCTG+TGG - chr8_1:74114342-74114361 None:intergenic 65.0%
CTCCGCCCCGATGTTAGACG+TGG + chr8_1:74113643-74113662 Msa1213860:CDS 65.0%
!! GGTGGTAGTGGCAGCAGCAG+CGG - chr8_1:74114315-74114334 None:intergenic 65.0%
!! GGCTGTGGTGGTGGTGGTAG+TGG - chr8_1:74114327-74114346 None:intergenic 65.0%
ATTGGTCGCGGTGGCTGTGG+TGG - chr8_1:74114339-74114358 None:intergenic 65.0%
!! GGTATTGGTCGCGGTGGCTG+TGG - chr8_1:74114342-74114361 None:intergenic 65.0%
!! CGCGGTGGCTGTGGTGGTGG+TGG - chr8_1:74114333-74114352 None:intergenic 75.0%
GGTCGCGGTGGCTGTGGTGG+TGG - chr8_1:74114336-74114355 None:intergenic 75.0%
!! CGCGGTGGCTGTGGTGGTGG+TGG - chr8_1:74114333-74114352 None:intergenic 75.0%
GGTCGCGGTGGCTGTGGTGG+TGG - chr8_1:74114336-74114355 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 74112822 74114790 74112822 ID=Msa1213860;Name=Msa1213860
chr8_1 mRNA 74112822 74114790 74112822 ID=Msa1213860-mRNA-1;Parent=Msa1213860;Name=Msa1213860-mRNA-1;_AED=0.00;_eAED=0.02;_QI=81|0.5|0.33|1|1|1|3|0|316
chr8_1 exon 74112822 74113071 74112822 ID=Msa1213860-mRNA-1:exon:25349;Parent=Msa1213860-mRNA-1
chr8_1 exon 74113596 74113725 74113596 ID=Msa1213860-mRNA-1:exon:25350;Parent=Msa1213860-mRNA-1
chr8_1 exon 74114139 74114790 74114139 ID=Msa1213860-mRNA-1:exon:25351;Parent=Msa1213860-mRNA-1
chr8_1 five_prime_UTR 74112822 74112902 74112822 ID=Msa1213860-mRNA-1:five_prime_utr;Parent=Msa1213860-mRNA-1
chr8_1 CDS 74112903 74113071 74112903 ID=Msa1213860-mRNA-1:cds;Parent=Msa1213860-mRNA-1
chr8_1 CDS 74113596 74113725 74113596 ID=Msa1213860-mRNA-1:cds;Parent=Msa1213860-mRNA-1
chr8_1 CDS 74114139 74114790 74114139 ID=Msa1213860-mRNA-1:cds;Parent=Msa1213860-mRNA-1
Gene Sequence

>Msa1213860

ATGGATGTAAAAGGAAGAGGAAGCGACAACAAAAACAACCTTATGAGTAGTGAAGAGGATGAGATGGACCTTAGAAGAGGTCCTTGGACCGTGGATGAGGACTTAACCCTCATGAATTACATTGCTACTCATGGCGAAGGTCGTTGGAATACCCTCGCCAACTCTGCTGGTCTCAAACGAACCGGTAAGAGTTGCAGATTAAGGTGGCTTAATTATCTCCGCCCCGATGTTAGACGTGGAAACATCACACTTGAAGAACAACTTTTGATTCTCGAGCTCCATACTCGTTGGGGTAACCGATGGTCGAAAATAGCTCAATATTTACCAGGAAGAACAGACAATGAAATTAAAAATTATTGGAGAACTCGTGTTCAAAAGCTTGCCAAACAACTCAAATGCGACGTGAATAGCAAGCAATTCAAGGACACCATGCGCTACCTTTGGATGCCGAGGCTAGTCGAACGTATTCAAGCCGCTGCTGCTGCCACTACCACCACCACCACAGCCACCGCGACCAATACCTCATACAATAATAACGGCAGCAAAATGACGGGTTCAACTCCAACAACTATAAACTATGAATTTATGAGTTCACAACCACATATGACACAAAGTTATACCCTAGAGAACAGCAACACAACTGCATCATCAGATTCATTTGAGAATAAGGTGTCAACATTATCGGATTTGGGTGATAATAATTATTATTGTACAAGTGTTAGTAATAAGAATAACCCTAATGCTAATTCAAATTATTATCAACCTTCTCATCAACTTAGCTTCTCGGATTGTATCACAAGCCCGTCTGGATTGTTTTCTCAAGGATTAATGGATTTCCAATCCATGGAGCCAAACAACACGTGGATGCAAAGTGGTGACTCATCTGACATTTTTTGGAATGCTGAGAACATGTTGTTTTTACAGCAACAACTCATGAACGACACAATGTAA
Protein sequence

>Msa1213860

MDVKGRGSDNKNNLMSSEEDEMDLRRGPWTVDEDLTLMNYIATHGEGRWNTLANSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKLAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAATTTTTTATATNTSYNNNGSKMTGSTPTTINYEFMSSQPHMTQSYTLENSNTTASSDSFENKVSTLSDLGDNNYYCTSVSNKNNPNANSNYYQPSHQLSFSDCITSPSGLFSQGLMDFQSMEPNNTWMQSGDSSDIFWNAENMLFLQQQLMNDTM*