AlfalfaGEDB | Msa0701610

M. sativa cultivar zhongmu-4 / Msa0701610

KEGG: K09414|K09419
GO: GO:0000003 GO:0000302 GO:0003006 GO:0003674 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006979 GO:0007275 GO:0008150 GO:0009266 GO:0009408 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009958 GO:0010033 GO:0010154 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022414 GO:0022622 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046983 GO:0048364 GO:0048518 GO:0048522 GO:0048527 GO:0048528 GO:0048530 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090696 GO:0090698 GO:0099402 GO:0140110 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
PFAM: PF00447.20

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0701610	XP_003629847.1	97.257	401	11	0	1	401	1	401	0.0	814

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0701610	sp\|O49403\|HFA4A_ARATH	51.095	411	179	11	1	400	1	400	4.06e-114	342

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0701610	G7L7A0	97.257	401	11	0	1	401	1	401	0.0	814

TFs/TRs:

Gene ID	Type	Classification
Msa0701610	TF	HSF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0618630	Msa0701610	0.927032	2.065696e-91	-8.615850e-47
Msa0657510	Msa0701610	0.963837	1.411654e-122	-8.615850e-47
Msa0697570	Msa0701610	0.809065	2.274633e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0701610	MtrunA17_Chr8g0379701	97.257	401	11	0	1	401	1	401	0.0	814
Msa0701610	MtrunA17_Chr2g0284481	40.633	411	186	9	1	383	2	382	5.40e-87	269
Msa0701610	MtrunA17_Chr6g0467041	36.212	359	177	9	6	358	16	328	2.88e-63	206
Msa0701610	MtrunA17_Chr5g0410881	51.630	184	82	1	11	187	31	214	8.86e-61	204
Msa0701610	MtrunA17_Chr8g0378061	52.239	201	84	4	13	207	23	217	1.51e-60	203
Msa0701610	MtrunA17_Chr2g0330821	49.744	195	86	2	1	187	60	250	1.07e-53	182
Msa0701610	MtrunA17_Chr1g0204741	36.082	291	166	4	11	288	39	322	8.55e-53	179
Msa0701610	MtrunA17_Chr4g0039891	44.865	185	94	2	10	187	10	193	1.17e-51	180
Msa0701610	MtrunA17_Chr4g0071051	47.486	179	87	1	11	189	100	271	2.86e-51	177
Msa0701610	MtrunA17_Chr7g0260331	39.130	230	126	3	11	226	48	277	7.08e-49	169
Msa0701610	MtrunA17_Chr3g0135831	41.584	202	114	1	11	208	45	246	8.50e-47	164
Msa0701610	MtrunA17_Chr8g0392001	46.875	192	91	3	12	194	22	211	8.74e-46	161
Msa0701610	MtrunA17_Chr1g0185131	42.541	181	87	3	12	189	32	198	1.68e-43	154
Msa0701610	MtrunA17_Chr6g0485571	38.308	201	116	2	10	206	9	205	3.40e-41	148
Msa0701610	MtrunA17_Chr5g0397881	64.356	101	35	1	4	103	15	115	6.37e-41	148
Msa0701610	MtrunA17_Chr3g0134031	64.646	99	34	1	6	103	17	115	2.15e-39	144
Msa0701610	MtrunA17_Chr5g0441531	66.667	99	32	1	6	103	18	116	6.59e-39	140
Msa0701610	MtrunA17_Chr5g0402291	58.824	102	42	0	8	109	5	106	7.79e-39	140
Msa0701610	MtrunA17_Chr8g0375041	41.139	158	93	0	12	169	9	166	2.13e-36	133
Msa0701610	MtrunA17_Chr1g0203601	40.854	164	70	2	8	144	14	177	2.55e-36	134
Msa0701610	MtrunA17_Chr6g0472421	59.596	99	39	1	6	103	26	124	6.06e-36	134
Msa0701610	MtrunA17_Chr7g0257331	49.123	114	58	0	3	116	13	126	2.12e-34	127
Msa0701610	MtrunA17_Chr4g0047421	37.714	175	91	5	12	176	33	199	5.48e-30	115
Msa0701610	MtrunA17_Chr1g0179321	68.750	64	20	0	8	71	45	108	1.75e-26	102
Msa0701610	MtrunA17_Chr2g0301521	44.286	140	74	2	96	232	1	139	1.87e-25	101
Msa0701610	MtrunA17_Chr2g0330841	39.716	141	76	2	72	207	41	177	6.52e-23	99.8
Msa0701610	MtrunA17_Chr4g0023771	63.492	63	22	1	10	71	13	75	3.12e-22	90.9
Msa0701610	MtrunA17_Chr1g0179311	27.869	122	86	1	72	193	14	133	9.63e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0701610	AT4G18880.1	51.095	411	179	11	1	400	1	400	4.13e-115	342
Msa0701610	AT5G45710.3	49.492	394	145	8	1	391	1	343	2.38e-110	328
Msa0701610	AT5G45710.1	49.492	394	145	8	1	391	1	343	2.38e-110	328
Msa0701610	AT4G13980.1	48.500	200	94	2	13	207	24	219	2.34e-59	200
Msa0701610	AT1G32330.2	41.949	236	118	2	6	222	31	266	1.27e-58	198
Msa0701610	AT1G32330.1	41.949	236	118	2	6	222	31	266	1.57e-58	198
Msa0701610	AT5G45710.4	40.940	298	123	8	96	391	1	247	1.82e-55	183
Msa0701610	AT5G45710.2	40.940	298	123	8	96	391	1	247	1.82e-55	183
Msa0701610	AT5G16820.1	42.991	214	109	2	8	208	23	236	1.49e-54	187
Msa0701610	AT5G16820.2	42.991	214	109	2	8	208	23	236	1.49e-54	187
Msa0701610	AT4G17750.1	45.026	191	91	1	11	187	51	241	7.87e-54	186
Msa0701610	AT3G22830.1	41.256	223	117	2	8	216	57	279	1.97e-53	183
Msa0701610	AT3G02990.1	47.283	184	93	1	8	187	19	202	3.95e-53	184
Msa0701610	AT2G26150.1	41.262	206	113	1	11	208	43	248	2.34e-50	173
Msa0701610	AT2G26150.4	41.262	206	113	1	11	208	43	248	2.34e-50	173
Msa0701610	AT5G03720.2	45.810	179	89	2	10	185	53	226	7.62e-49	171
Msa0701610	AT5G03720.1	45.810	179	89	2	10	185	53	226	7.62e-49	171
Msa0701610	AT5G43840.1	43.000	200	90	3	11	208	16	193	1.39e-46	161
Msa0701610	AT1G67970.1	43.386	189	100	3	10	194	17	202	1.75e-45	161
Msa0701610	AT3G51910.1	45.652	184	85	3	11	194	28	196	4.40e-44	154
Msa0701610	AT5G54070.1	39.698	199	110	2	10	208	69	257	3.49e-41	148
Msa0701610	AT3G24520.1	39.247	186	86	4	10	195	15	173	1.73e-40	147
Msa0701610	AT1G46264.1	63.000	100	36	1	5	103	26	125	1.82e-39	144
Msa0701610	AT3G63350.1	38.725	204	111	3	1	204	21	210	1.94e-39	142
Msa0701610	AT5G62020.1	51.181	127	57	2	3	128	13	135	2.12e-38	140
Msa0701610	AT4G36990.1	63.265	98	35	1	9	105	10	107	9.25e-38	138
Msa0701610	AT4G11660.1	59.596	99	39	1	6	103	52	150	1.68e-36	137
Msa0701610	AT2G41690.1	58.491	106	43	1	11	115	39	144	2.23e-36	133
Msa0701610	AT4G18870.1	54.639	97	39	2	5	99	6	99	6.37e-27	109
Msa0701610	AT4G18870.1	52.174	92	44	0	8	99	142	233	2.08e-26	107
Msa0701610	AT1G77570.1	43.333	90	48	2	13	99	27	116	1.46e-17	79.3
Msa0701610	AT2G26150.3	33.621	116	77	0	72	187	49	164	1.15e-16	80.1
Msa0701610	AT2G26150.2	33.621	116	77	0	72	187	49	164	1.15e-16	80.1
Msa0701610	AT4G19630.1	38.947	95	55	1	8	99	7	101	2.16e-15	72.8

Find 116 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGATTATTGATTGATTATC+AGG	0.155162	4_4:-73041897	Msa0701610:five_prime_UTR
TTGAGGCATCCGTGGCATTT+TGG	0.204494	4_4:-73040774	Msa0701610:CDS
ATTGGGAATTGATTAGGTTT+TGG	0.243435	4_4:-73041677	Msa0701610:five_prime_UTR
TCAACGTTCATGTCAATTTC+AGG	0.245219	4_4:+73040616	None:intergenic
TAACGTTGTTGGATCTTAAA+AGG	0.263526	4_4:+73042123	None:intergenic
AGAATATATATAAGGTGATT+TGG	0.271218	4_4:-73041778	Msa0701610:five_prime_UTR
ATATGTATGTGCAGGGATTT+AGG	0.272285	4_4:-73041323	Msa0701610:intron
AGCAAAACCCTTGCGAATTC+CGG	0.278319	4_4:+73041509	None:intergenic
TAGCTATTGATTATTTCTTC+TGG	0.284577	4_4:-73040316	Msa0701610:three_prime_UTR
GAATATATATAAGGTGATTT+GGG	0.287886	4_4:-73041777	Msa0701610:five_prime_UTR
CACTCATTCAAACATGGATT+TGG	0.293073	4_4:-73040713	Msa0701610:CDS
CTGGGGTTAATGATGTATTC+TGG	0.294292	4_4:-73040525	Msa0701610:CDS
GACTGTTCTTCTTTGTGATT+AGG	0.296163	4_4:-73041932	Msa0701610:five_prime_UTR
ATTGGGGATTGATTAGGTTC+TGG	0.305724	4_4:-73041735	Msa0701610:five_prime_UTR
TTTCTTCCAGAATATATATA+AGG	0.307353	4_4:-73041786	Msa0701610:five_prime_UTR
CTAACATGCCCCATCTGTTC+TGG	0.312124	4_4:+73040358	None:intergenic
TTGGGGATTGATTAGGTTCT+GGG	0.319125	4_4:-73041734	Msa0701610:five_prime_UTR
TCTTCTTTGTGATTAGGTTA+TGG	0.325896	4_4:-73041926	Msa0701610:five_prime_UTR
ATACTTTGATTAGAGGGTTA+TGG	0.332997	4_4:-73041954	Msa0701610:five_prime_UTR
CTTGGTTATACTTTGATTAG+AGG	0.334009	4_4:-73041961	Msa0701610:five_prime_UTR
TTGTCAATTGGGAATTGATT+AGG	0.337277	4_4:-73041683	Msa0701610:five_prime_UTR
CGAAGAGATACCAGCATGAT+TGG	0.339945	4_4:-73041089	Msa0701610:CDS
TGCAATTTCCAAGGAAAACT+TGG	0.343304	4_4:+73042031	None:intergenic
CTAGTGATCATGGTAGATTT+TGG	0.344391	4_4:-73040408	Msa0701610:CDS
TGAGGGTGAGATTTGTCAAT+TGG	0.347645	4_4:-73041695	Msa0701610:five_prime_UTR
AGAATCACCACTGCAGCAAC+TGG	0.356379	4_4:-73040544	Msa0701610:CDS
AAGAGATTTACAGCAATCAT+AGG	0.368528	4_4:+73040964	None:intergenic
GACGTTAAACACCGAGAGAT+TGG	0.369357	4_4:-73040803	Msa0701610:CDS
TGCCTTTCAGACTCCGTTAG+AGG	0.391700	4_4:+73041171	None:intergenic
TAGATACATATTTCATACTT+TGG	0.395073	4_4:-73040235	Msa0701610:three_prime_UTR
GGAGAGAAAACGAAGGTTGC+CGG	0.399062	4_4:-73040923	Msa0701610:CDS
ATTCAGCTGCCTGATAAAAC+TGG	0.407135	4_4:+73041457	None:intergenic
AAAGGTTAAAGGGTTGTGTT+TGG	0.409541	4_4:+73042197	None:intergenic
CTCTCCATGGCTTCTGCCAG+TGG	0.418903	4_4:+73040940	None:intergenic
TCATAAGTCTTTGCCAGAAA+AGG	0.419332	4_4:+73041608	None:intergenic
AACAACGGCGCTAACGTTGT+TGG	0.424186	4_4:+73042112	None:intergenic
AAATCACCTTATATATATTC+TGG	0.426534	4_4:+73041780	None:intergenic
GCCTCAAGAGCAGCAGCAGC+TGG	0.427478	4_4:+73040592	None:intergenic
TCTGGCAAAGACTTATGAAA+TGG	0.438206	4_4:-73041603	Msa0701610:CDS
CAATCATGTGTAATAAAACT+TGG	0.442618	4_4:-73040280	Msa0701610:three_prime_UTR
TGAAATAGAGAAGCTGAAAC+AGG	0.448407	4_4:-73041136	Msa0701610:CDS
GATGCACTCCACGAAACAAT+AGG	0.454683	4_4:+73041560	None:intergenic
TGGGGTTAATGATGTATTCT+GGG	0.456218	4_4:-73040524	Msa0701610:CDS
GAGGGTGAGATTTGTCAATT+GGG	0.461697	4_4:-73041694	Msa0701610:five_prime_UTR
ACCAGCTGCTGCTGCTCTTG+AGG	0.466489	4_4:-73040593	Msa0701610:CDS
CAAAGATTGTGTCACTCCAT+TGG	0.472243	4_4:-73040196	Msa0701610:three_prime_UTR
GCCTTTCAGACTCCGTTAGA+GGG	0.473627	4_4:+73041172	None:intergenic
TTGGTTATACTTTGATTAGA+GGG	0.473777	4_4:-73041960	Msa0701610:five_prime_UTR
ATGTCAATTTCAGGTGACTT+AGG	0.477806	4_4:+73040625	None:intergenic
TGCAGAGAATGACTATGAAC+GGG	0.482637	4_4:+73041213	None:intergenic
TCCTGGTGCATCGGAAGCAC+AGG	0.486616	4_4:-73040482	Msa0701610:CDS
GAGACTCTTGCACATGAAGT+TGG	0.497289	4_4:-73040751	Msa0701610:CDS
CATATTTCATACTTTGGCTG+AGG	0.500964	4_4:-73040229	Msa0701610:three_prime_UTR
CGTTCACACTCATTCAAACA+TGG	0.502442	4_4:-73040719	Msa0701610:CDS
GAAGGAAAACCTAGTGATCA+TGG	0.502730	4_4:-73040418	Msa0701610:CDS
TTGGCAAATTCCCACTGCTC+CGG	0.502904	4_4:+73041291	None:intergenic
TGATTATTGATTGATTATCA+GGG	0.504572	4_4:-73041896	Msa0701610:five_prime_UTR
GGGATTTAGGAAAGTTGATC+CGG	0.507404	4_4:-73041310	Msa0701610:CDS
CTTGCCACTGGCAGAAGCCA+TGG	0.509175	4_4:-73040944	Msa0701610:CDS
TTTCGTTGTGTGGAATCCTC+CGG	0.511600	4_4:-73041528	Msa0701610:CDS
TCCTGTGCTTCCGATGCACC+AGG	0.511617	4_4:+73040481	None:intergenic
GAAGAGATACCAGCATGATT+GGG	0.512133	4_4:-73041088	Msa0701610:CDS
TGCTGTAAATCTCTTGCCAC+TGG	0.515181	4_4:-73040956	Msa0701610:CDS
GGAAAGTTGATCCGGAGCAG+TGG	0.515618	4_4:-73041302	Msa0701610:CDS
CAGTTCTTGACAGAGGATCC+TGG	0.516203	4_4:-73040499	Msa0701610:CDS
AGACTTCTGTAGCTTTGCCC+AGG	0.516910	4_4:-73040852	Msa0701610:CDS
AAACAATCATCCAGAACAGA+TGG	0.518388	4_4:-73040368	Msa0701610:CDS
ATACATATTACATCCTCCAT+TGG	0.519440	4_4:-73040131	Msa0701610:three_prime_UTR
CCTCGGATCCTATTGTTTCG+TGG	0.527360	4_4:-73041568	Msa0701610:CDS
TTATTGTGCTTAAAGAATCT+CGG	0.532647	4_4:+73041485	None:intergenic
CGAACAAAAGTTTCGTTGTG+TGG	0.533195	4_4:-73041538	Msa0701610:CDS
GCATTGTTCGAAAGATCAGT+TGG	0.538254	4_4:-73041046	Msa0701610:CDS
AACGTAAGTTGCAATTTCCA+AGG	0.545600	4_4:+73042022	None:intergenic
GTCAAAGTAGAGTTATCCTC+TGG	0.546841	4_4:+73040823	None:intergenic
AGCTAGTGTTGAAGATGCTA+TGG	0.547413	4_4:-73040875	Msa0701610:CDS
CTCAAGTTGATCCAATCTCT+CGG	0.553126	4_4:+73040792	None:intergenic
GACAGAGGATCCTGGTGCAT+CGG	0.553354	4_4:-73040491	Msa0701610:CDS
ATTAACCCCAGTTGCTGCAG+TGG	0.553513	4_4:+73040537	None:intergenic
CCCCTCTAACGGAGTCTGAA+AGG	0.554429	4_4:-73041173	Msa0701610:CDS
ATGCAGAGAATGACTATGAA+CGG	0.560960	4_4:+73041212	None:intergenic
AATACGTTGACCTTCTGCTC+AGG	0.562482	4_4:-73042300	Msa0701610:five_prime_UTR
GCTGCAGTGGTGATTCTCGC+AGG	0.569378	4_4:+73040550	None:intergenic
TAAGTCTTTGCCAGAAAAGG+AGG	0.570699	4_4:+73041611	None:intergenic
CAAAATCTACCATGATCACT+AGG	0.571873	4_4:+73040409	None:intergenic
AACAATCATCCAGAACAGAT+GGG	0.574845	4_4:-73040367	Msa0701610:CDS
GGAATCCTCCGGAATTCGCA+AGG	0.575730	4_4:-73041517	Msa0701610:CDS
TTAAAGCAACCACTTCTCGC+CGG	0.577237	4_4:+73040904	None:intergenic
GAAAGTTGATCCGGAGCAGT+GGG	0.578322	4_4:-73041301	Msa0701610:CDS
CATGCCTTTCCCAATCATGC+TGG	0.579073	4_4:+73041079	None:intergenic
GAATCACCACTGCAGCAACT+GGG	0.580374	4_4:-73040543	Msa0701610:CDS
CGAAGGTTGCCGGCGAGAAG+TGG	0.586677	4_4:-73040913	Msa0701610:CDS
AATATATATAAGGTGATTTG+GGG	0.597900	4_4:-73041776	Msa0701610:five_prime_UTR
CCTTTCAGACTCCGTTAGAG+GGG	0.598591	4_4:+73041173	None:intergenic
TGAATATTCTTCATCAGATG+CGG	0.602613	4_4:+73041246	None:intergenic
GACTTCTGTAGCTTTGCCCA+GGG	0.603526	4_4:-73040851	Msa0701610:CDS
GATACCAGCATGATTGGGAA+AGG	0.606022	4_4:-73041083	Msa0701610:CDS
AAAACCCTTGCGAATTCCGG+AGG	0.607238	4_4:+73041512	None:intergenic
TCAAGCACAAGCCCCTCTAA+CGG	0.613167	4_4:-73041184	Msa0701610:CDS
GGCAAAGACTTATGAAATGG+TGG	0.613237	4_4:-73041600	Msa0701610:CDS
GGATCAACTTGAGGCATCCG+TGG	0.615719	4_4:-73040782	Msa0701610:CDS
CGAGAGATTGGATCAACTTG+AGG	0.627773	4_4:-73040791	Msa0701610:CDS
AATGGTGGATGATCGATCCT+CGG	0.628991	4_4:-73041585	Msa0701610:CDS
GAATCCTCCGGAATTCGCAA+GGG	0.629052	4_4:-73041516	Msa0701610:CDS
TGATGAAGAATATTCATAGA+CGG	0.629516	4_4:-73041239	Msa0701610:CDS
CTGCAATGCTTCAGAAACAG+AGG	0.634333	4_4:+73040990	None:intergenic
ATATCTTGTCAGCAACTAGA+CGG	0.636770	4_4:-73040658	Msa0701610:CDS
ACAATCATCCAGAACAGATG+GGG	0.647372	4_4:-73040366	Msa0701610:CDS
CTGGGAACAGTTCTTGACAG+AGG	0.655854	4_4:-73040506	Msa0701610:CDS
AAGAGTCTCCCAAAATGCCA+CGG	0.657362	4_4:+73040765	None:intergenic
AATCACCACTGCAGCAACTG+GGG	0.658502	4_4:-73040542	Msa0701610:CDS
GGATAGAGAACAACTCCTCG+TGG	0.661247	4_4:-73041115	Msa0701610:CDS
CCACGAAACAATAGGATCCG+AGG	0.666703	4_4:+73041568	None:intergenic
ATTACATATGAAGAAAACAA+CGG	0.686562	4_4:+73042097	None:intergenic
GGTATCTCTTCGTCTCCACG+AGG	0.715796	4_4:+73041100	None:intergenic
TTTGCCCAGGGAAAATCCAG+AGG	0.715905	4_4:-73040839	Msa0701610:CDS
AAGCCATGGAGAGAAAACGA+AGG	0.761326	4_4:-73040930	Msa0701610:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTGTTTTATTTTGAAAAAT+TGG	-	chr4_4:73040700-73040719	Msa0701610:CDS	10.0%
!!!	TTGTTTTATTTTGAAAAATT+GGG	-	chr4_4:73040701-73040720	Msa0701610:CDS	10.0%
!!!	TTTGTTTTATTTTGAAAAAT+TGG	-	chr4_4:73040700-73040719	Msa0701610:CDS	10.0%
!!!	TTGTTTTATTTTGAAAAATT+GGG	-	chr4_4:73040701-73040720	Msa0701610:CDS	10.0%
!!!	TGTTTTATTTTGAAAAATTG+GGG	-	chr4_4:73040702-73040721	Msa0701610:CDS	15.0%
!!!	TTTATTTTATTTACTGATTC+TGG	-	chr4_4:73041079-73041098	Msa0701610:CDS	15.0%
!!!	TGTTTTATTTTGAAAAATTG+GGG	-	chr4_4:73040702-73040721	Msa0701610:CDS	15.0%
!!!	TTTATTTTATTTACTGATTC+TGG	-	chr4_4:73041079-73041098	Msa0701610:CDS	15.0%
!!!	AAATTGAATTTTGAAGTGAA+AGG	+	chr4_4:73040277-73040296	None:intergenic	20.0%
!!	ATTACATATGAAGAAAACAA+CGG	+	chr4_4:73040359-73040378	None:intergenic	20.0%
!!!	TTCTTTTTGATGATTTTTCT+TGG	-	chr4_4:73040474-73040493	Msa0701610:CDS	20.0%
!!!	ATGATTATTGATTGATTATC+AGG	-	chr4_4:73040556-73040575	Msa0701610:CDS	20.0%
!!!	TGATTATTGATTGATTATCA+GGG	-	chr4_4:73040557-73040576	Msa0701610:CDS	20.0%
!!!	ATTTTGTCTAGGTTATATTT+GGG	-	chr4_4:73040592-73040611	Msa0701610:CDS	20.0%
!!!	TTTGCTTTGTTTTTAATTTG+TGG	-	chr4_4:73040638-73040657	Msa0701610:CDS	20.0%
!!	TTTCTTCCAGAATATATATA+AGG	-	chr4_4:73040667-73040686	Msa0701610:CDS	20.0%
!!	AAATCACCTTATATATATTC+TGG	+	chr4_4:73040676-73040695	None:intergenic	20.0%
!!	AGAATATATATAAGGTGATT+TGG	-	chr4_4:73040675-73040694	Msa0701610:CDS	20.0%
!!	GAATATATATAAGGTGATTT+GGG	-	chr4_4:73040676-73040695	Msa0701610:CDS	20.0%
!!	AATATATATAAGGTGATTTG+GGG	-	chr4_4:73040677-73040696	Msa0701610:CDS	20.0%
!!	TAGATACATATTTCATACTT+TGG	-	chr4_4:73042218-73042237	Msa0701610:five_prime_UTR	20.0%
!!!	AAATTGAATTTTGAAGTGAA+AGG	+	chr4_4:73040277-73040296	None:intergenic	20.0%
!!	ATTACATATGAAGAAAACAA+CGG	+	chr4_4:73040359-73040378	None:intergenic	20.0%
!!!	TTCTTTTTGATGATTTTTCT+TGG	-	chr4_4:73040474-73040493	Msa0701610:CDS	20.0%
!!!	ATGATTATTGATTGATTATC+AGG	-	chr4_4:73040556-73040575	Msa0701610:CDS	20.0%
!!!	TGATTATTGATTGATTATCA+GGG	-	chr4_4:73040557-73040576	Msa0701610:CDS	20.0%
!!!	ATTTTGTCTAGGTTATATTT+GGG	-	chr4_4:73040592-73040611	Msa0701610:CDS	20.0%
!!!	TTTGCTTTGTTTTTAATTTG+TGG	-	chr4_4:73040638-73040657	Msa0701610:CDS	20.0%
!!	TTTCTTCCAGAATATATATA+AGG	-	chr4_4:73040667-73040686	Msa0701610:CDS	20.0%
!!	AAATCACCTTATATATATTC+TGG	+	chr4_4:73040676-73040695	None:intergenic	20.0%
!!	AGAATATATATAAGGTGATT+TGG	-	chr4_4:73040675-73040694	Msa0701610:CDS	20.0%
!!	GAATATATATAAGGTGATTT+GGG	-	chr4_4:73040676-73040695	Msa0701610:CDS	20.0%
!!	AATATATATAAGGTGATTTG+GGG	-	chr4_4:73040677-73040696	Msa0701610:CDS	20.0%
!!	TAGATACATATTTCATACTT+TGG	-	chr4_4:73042218-73042237	Msa0701610:five_prime_UTR	20.0%
!!!	TTTTGAAGTGAAAGGTTAAA+GGG	+	chr4_4:73040269-73040288	None:intergenic	25.0%
!!!	ATTTTGAAGTGAAAGGTTAA+AGG	+	chr4_4:73040270-73040289	None:intergenic	25.0%
!	AAAATCATCAAAAAGAAGCT+TGG	+	chr4_4:73040471-73040490	None:intergenic	25.0%
!	TTGGTTATACTTTGATTAGA+GGG	-	chr4_4:73040493-73040512	Msa0701610:CDS	25.0%
!!!	TTGATTATCAGGGTTTTTTT+TGG	-	chr4_4:73040567-73040586	Msa0701610:CDS	25.0%
!!!	TGATTATCAGGGTTTTTTTT+GGG	-	chr4_4:73040568-73040587	Msa0701610:CDS	25.0%
!!	GATTTTGTCTAGGTTATATT+TGG	-	chr4_4:73040591-73040610	Msa0701610:CDS	25.0%
!!!	GTTTTGAATTTAGGTTTTGA+GGG	-	chr4_4:73040741-73040760	Msa0701610:CDS	25.0%
!	TTATTGTGCTTAAAGAATCT+CGG	+	chr4_4:73040971-73040990	None:intergenic	25.0%
!	TATGTAAGCAAATTTGATGT+CGG	-	chr4_4:73041022-73041041	Msa0701610:CDS	25.0%
!!!	TATTTACTGATTCTGGTTTT+TGG	-	chr4_4:73041086-73041105	Msa0701610:CDS	25.0%
!!	TTGCCAATGATGATTTTATA+AGG	-	chr4_4:73041178-73041197	Msa0701610:CDS	25.0%
!!	TGCCAATGATGATTTTATAA+GGG	-	chr4_4:73041179-73041198	Msa0701610:CDS	25.0%
!	TGATGAAGAATATTCATAGA+CGG	-	chr4_4:73041214-73041233	Msa0701610:CDS	25.0%
!	AATAGTAGCAGAAAAAATGA+AGG	-	chr4_4:73042017-73042036	Msa0701610:five_prime_UTR	25.0%
!!	TAGCTATTGATTATTTCTTC+TGG	-	chr4_4:73042137-73042156	Msa0701610:five_prime_UTR	25.0%
!!	TTTTATTACACATGATTGTG+GGG	+	chr4_4:73042171-73042190	None:intergenic	25.0%
!!!	GTTTTATTACACATGATTGT+GGG	+	chr4_4:73042172-73042191	None:intergenic	25.0%
!!!	AGTTTTATTACACATGATTG+TGG	+	chr4_4:73042173-73042192	None:intergenic	25.0%
!	CAATCATGTGTAATAAAACT+TGG	-	chr4_4:73042173-73042192	Msa0701610:five_prime_UTR	25.0%
!!!	TTTTGAAGTGAAAGGTTAAA+GGG	+	chr4_4:73040269-73040288	None:intergenic	25.0%
!!!	ATTTTGAAGTGAAAGGTTAA+AGG	+	chr4_4:73040270-73040289	None:intergenic	25.0%
!	AAAATCATCAAAAAGAAGCT+TGG	+	chr4_4:73040471-73040490	None:intergenic	25.0%
!	TTGGTTATACTTTGATTAGA+GGG	-	chr4_4:73040493-73040512	Msa0701610:CDS	25.0%
!!!	TTGATTATCAGGGTTTTTTT+TGG	-	chr4_4:73040567-73040586	Msa0701610:CDS	25.0%
!!!	TGATTATCAGGGTTTTTTTT+GGG	-	chr4_4:73040568-73040587	Msa0701610:CDS	25.0%
!!	GATTTTGTCTAGGTTATATT+TGG	-	chr4_4:73040591-73040610	Msa0701610:CDS	25.0%
!!!	GTTTTGAATTTAGGTTTTGA+GGG	-	chr4_4:73040741-73040760	Msa0701610:CDS	25.0%
!	TTATTGTGCTTAAAGAATCT+CGG	+	chr4_4:73040971-73040990	None:intergenic	25.0%
!	TATGTAAGCAAATTTGATGT+CGG	-	chr4_4:73041022-73041041	Msa0701610:CDS	25.0%
!!!	TATTTACTGATTCTGGTTTT+TGG	-	chr4_4:73041086-73041105	Msa0701610:CDS	25.0%
!!	TTGCCAATGATGATTTTATA+AGG	-	chr4_4:73041178-73041197	Msa0701610:CDS	25.0%
!!	TGCCAATGATGATTTTATAA+GGG	-	chr4_4:73041179-73041198	Msa0701610:CDS	25.0%
!	TGATGAAGAATATTCATAGA+CGG	-	chr4_4:73041214-73041233	Msa0701610:CDS	25.0%
!	AATAGTAGCAGAAAAAATGA+AGG	-	chr4_4:73042017-73042036	Msa0701610:five_prime_UTR	25.0%
!!	TAGCTATTGATTATTTCTTC+TGG	-	chr4_4:73042137-73042156	Msa0701610:five_prime_UTR	25.0%
!!	TTTTATTACACATGATTGTG+GGG	+	chr4_4:73042171-73042190	None:intergenic	25.0%
!!!	GTTTTATTACACATGATTGT+GGG	+	chr4_4:73042172-73042191	None:intergenic	25.0%
!!!	AGTTTTATTACACATGATTG+TGG	+	chr4_4:73042173-73042192	None:intergenic	25.0%
!	CAATCATGTGTAATAAAACT+TGG	-	chr4_4:73042173-73042192	Msa0701610:five_prime_UTR	25.0%
!	TAATATTTTTCCTGAGCAGA+AGG	+	chr4_4:73040166-73040185	None:intergenic	30.0%
	TAACGTTGTTGGATCTTAAA+AGG	+	chr4_4:73040333-73040352	None:intergenic	30.0%
	CTTGGTTATACTTTGATTAG+AGG	-	chr4_4:73040492-73040511	Msa0701610:CDS	30.0%
	ATACTTTGATTAGAGGGTTA+TGG	-	chr4_4:73040499-73040518	Msa0701610:CDS	30.0%
	TCTTCTTTGTGATTAGGTTA+TGG	-	chr4_4:73040527-73040546	Msa0701610:CDS	30.0%
!!!	GATTATCAGGGTTTTTTTTG+GGG	-	chr4_4:73040569-73040588	Msa0701610:CDS	30.0%
!!!	TTTTTTTGGGGATTTTGTCT+AGG	-	chr4_4:73040581-73040600	Msa0701610:CDS	30.0%
	TGAAAAATTGGGGATTGATT+AGG	-	chr4_4:73040712-73040731	Msa0701610:CDS	30.0%
!!!	GGTTTTGAATTTAGGTTTTG+AGG	-	chr4_4:73040740-73040759	Msa0701610:CDS	30.0%
	TTGTCAATTGGGAATTGATT+AGG	-	chr4_4:73040770-73040789	Msa0701610:CDS	30.0%
!	ATTGGGAATTGATTAGGTTT+TGG	-	chr4_4:73040776-73040795	Msa0701610:CDS	30.0%
!	TTGGGAATTGATTAGGTTTT+GGG	-	chr4_4:73040777-73040796	Msa0701610:CDS	30.0%
!!!	TTTTGGGTTTTTTTGAGTGA+TGG	-	chr4_4:73040793-73040812	Msa0701610:CDS	30.0%
!!	ATAACTTCTCCAGTTTTATC+AGG	-	chr4_4:73040987-73041006	Msa0701610:CDS	30.0%
	TTCATAGTATATGTATGTGC+AGG	-	chr4_4:73041122-73041141	Msa0701610:CDS	30.0%
	TCATAGTATATGTATGTGCA+GGG	-	chr4_4:73041123-73041142	Msa0701610:CDS	30.0%
!	GCCAATGATGATTTTATAAG+GGG	-	chr4_4:73041180-73041199	Msa0701610:CDS	30.0%
!	CCAATGATGATTTTATAAGG+GGG	-	chr4_4:73041181-73041200	Msa0701610:CDS	30.0%
	TGAATATTCTTCATCAGATG+CGG	+	chr4_4:73041210-73041229	None:intergenic	30.0%
	GAAAGATCAGTTGGAAAAAT+TGG	-	chr4_4:73041416-73041435	Msa0701610:intron	30.0%
	AAGAGATTTACAGCAATCAT+AGG	+	chr4_4:73041492-73041511	None:intergenic	30.0%
	ATACATATTACATCCTCCAT+TGG	-	chr4_4:73042322-73042341	Msa0701610:five_prime_UTR	30.0%
!	TAATATTTTTCCTGAGCAGA+AGG	+	chr4_4:73040166-73040185	None:intergenic	30.0%
	TAACGTTGTTGGATCTTAAA+AGG	+	chr4_4:73040333-73040352	None:intergenic	30.0%
	CTTGGTTATACTTTGATTAG+AGG	-	chr4_4:73040492-73040511	Msa0701610:CDS	30.0%
	ATACTTTGATTAGAGGGTTA+TGG	-	chr4_4:73040499-73040518	Msa0701610:CDS	30.0%
	TCTTCTTTGTGATTAGGTTA+TGG	-	chr4_4:73040527-73040546	Msa0701610:CDS	30.0%
!!!	GATTATCAGGGTTTTTTTTG+GGG	-	chr4_4:73040569-73040588	Msa0701610:CDS	30.0%
!!!	TTTTTTTGGGGATTTTGTCT+AGG	-	chr4_4:73040581-73040600	Msa0701610:CDS	30.0%
	TGAAAAATTGGGGATTGATT+AGG	-	chr4_4:73040712-73040731	Msa0701610:CDS	30.0%
!!!	GGTTTTGAATTTAGGTTTTG+AGG	-	chr4_4:73040740-73040759	Msa0701610:CDS	30.0%
	TTGTCAATTGGGAATTGATT+AGG	-	chr4_4:73040770-73040789	Msa0701610:CDS	30.0%
!	ATTGGGAATTGATTAGGTTT+TGG	-	chr4_4:73040776-73040795	Msa0701610:CDS	30.0%
!	TTGGGAATTGATTAGGTTTT+GGG	-	chr4_4:73040777-73040796	Msa0701610:CDS	30.0%
!!!	TTTTGGGTTTTTTTGAGTGA+TGG	-	chr4_4:73040793-73040812	Msa0701610:CDS	30.0%
!!	ATAACTTCTCCAGTTTTATC+AGG	-	chr4_4:73040987-73041006	Msa0701610:CDS	30.0%
	TTCATAGTATATGTATGTGC+AGG	-	chr4_4:73041122-73041141	Msa0701610:CDS	30.0%
	TCATAGTATATGTATGTGCA+GGG	-	chr4_4:73041123-73041142	Msa0701610:CDS	30.0%
!	GCCAATGATGATTTTATAAG+GGG	-	chr4_4:73041180-73041199	Msa0701610:CDS	30.0%
!	CCAATGATGATTTTATAAGG+GGG	-	chr4_4:73041181-73041200	Msa0701610:CDS	30.0%
	TGAATATTCTTCATCAGATG+CGG	+	chr4_4:73041210-73041229	None:intergenic	30.0%
	GAAAGATCAGTTGGAAAAAT+TGG	-	chr4_4:73041416-73041435	Msa0701610:intron	30.0%
	AAGAGATTTACAGCAATCAT+AGG	+	chr4_4:73041492-73041511	None:intergenic	30.0%
	ATACATATTACATCCTCCAT+TGG	-	chr4_4:73042322-73042341	Msa0701610:five_prime_UTR	30.0%
	TTATGCAGAAGAGAAAAAGC+TGG	-	chr4_4:73040183-73040202	Msa0701610:three_prime_UTR	35.0%
	AAAGGTTAAAGGGTTGTGTT+TGG	+	chr4_4:73040259-73040278	None:intergenic	35.0%
!	CTTTTTGTCCAAGTTTTCCT+TGG	-	chr4_4:73040414-73040433	Msa0701610:CDS	35.0%
	TGCAATTTCCAAGGAAAACT+TGG	+	chr4_4:73040425-73040444	None:intergenic	35.0%
	AACGTAAGTTGCAATTTCCA+AGG	+	chr4_4:73040434-73040453	None:intergenic	35.0%
	GACTGTTCTTCTTTGTGATT+AGG	-	chr4_4:73040521-73040540	Msa0701610:CDS	35.0%
!!!	AGGTTCTGGGTTTTGAATTT+AGG	-	chr4_4:73040732-73040751	Msa0701610:CDS	35.0%
	TCATAAGTCTTTGCCAGAAA+AGG	+	chr4_4:73040848-73040867	None:intergenic	35.0%
	TCTGGCAAAGACTTATGAAA+TGG	-	chr4_4:73040850-73040869	Msa0701610:CDS	35.0%
	ATATGTATGTGCAGGGATTT+AGG	-	chr4_4:73041130-73041149	Msa0701610:CDS	35.0%
	CCCCCTTATAAAATCATCAT+TGG	+	chr4_4:73041184-73041203	None:intergenic	35.0%
	ATGCAGAGAATGACTATGAA+CGG	+	chr4_4:73041244-73041263	None:intergenic	35.0%
	TGAAATAGAGAAGCTGAAAC+AGG	-	chr4_4:73041317-73041336	Msa0701610:intron	35.0%
	CACTCATTCAAACATGGATT+TGG	-	chr4_4:73041740-73041759	Msa0701610:five_prime_UTR	35.0%
	ATATCTTGTCAGCAACTAGA+CGG	-	chr4_4:73041795-73041814	Msa0701610:five_prime_UTR	35.0%
!	ATGTCAATTTCAGGTGACTT+AGG	+	chr4_4:73041831-73041850	None:intergenic	35.0%
	TCAACGTTCATGTCAATTTC+AGG	+	chr4_4:73041840-73041859	None:intergenic	35.0%
	TGGGGTTAATGATGTATTCT+GGG	-	chr4_4:73041929-73041948	Msa0701610:five_prime_UTR	35.0%
	CAAAATCTACCATGATCACT+AGG	+	chr4_4:73042047-73042066	None:intergenic	35.0%
!	CTAGTGATCATGGTAGATTT+TGG	-	chr4_4:73042045-73042064	Msa0701610:five_prime_UTR	35.0%
	AAACAATCATCCAGAACAGA+TGG	-	chr4_4:73042085-73042104	Msa0701610:five_prime_UTR	35.0%
	AACAATCATCCAGAACAGAT+GGG	-	chr4_4:73042086-73042105	Msa0701610:five_prime_UTR	35.0%
	CATATTTCATACTTTGGCTG+AGG	-	chr4_4:73042224-73042243	Msa0701610:five_prime_UTR	35.0%
	CTATTGCAGACAAAAACCAA+TGG	+	chr4_4:73042276-73042295	None:intergenic	35.0%
	TTATGCAGAAGAGAAAAAGC+TGG	-	chr4_4:73040183-73040202	Msa0701610:three_prime_UTR	35.0%
	AAAGGTTAAAGGGTTGTGTT+TGG	+	chr4_4:73040259-73040278	None:intergenic	35.0%
!	CTTTTTGTCCAAGTTTTCCT+TGG	-	chr4_4:73040414-73040433	Msa0701610:CDS	35.0%
	TGCAATTTCCAAGGAAAACT+TGG	+	chr4_4:73040425-73040444	None:intergenic	35.0%
	AACGTAAGTTGCAATTTCCA+AGG	+	chr4_4:73040434-73040453	None:intergenic	35.0%
	GACTGTTCTTCTTTGTGATT+AGG	-	chr4_4:73040521-73040540	Msa0701610:CDS	35.0%
!!!	AGGTTCTGGGTTTTGAATTT+AGG	-	chr4_4:73040732-73040751	Msa0701610:CDS	35.0%
	TCATAAGTCTTTGCCAGAAA+AGG	+	chr4_4:73040848-73040867	None:intergenic	35.0%
	TCTGGCAAAGACTTATGAAA+TGG	-	chr4_4:73040850-73040869	Msa0701610:CDS	35.0%
	ATATGTATGTGCAGGGATTT+AGG	-	chr4_4:73041130-73041149	Msa0701610:CDS	35.0%
	CCCCCTTATAAAATCATCAT+TGG	+	chr4_4:73041184-73041203	None:intergenic	35.0%
	ATGCAGAGAATGACTATGAA+CGG	+	chr4_4:73041244-73041263	None:intergenic	35.0%
	TGAAATAGAGAAGCTGAAAC+AGG	-	chr4_4:73041317-73041336	Msa0701610:intron	35.0%
	CACTCATTCAAACATGGATT+TGG	-	chr4_4:73041740-73041759	Msa0701610:five_prime_UTR	35.0%
	ATATCTTGTCAGCAACTAGA+CGG	-	chr4_4:73041795-73041814	Msa0701610:five_prime_UTR	35.0%
!	ATGTCAATTTCAGGTGACTT+AGG	+	chr4_4:73041831-73041850	None:intergenic	35.0%
	TCAACGTTCATGTCAATTTC+AGG	+	chr4_4:73041840-73041859	None:intergenic	35.0%
	TGGGGTTAATGATGTATTCT+GGG	-	chr4_4:73041929-73041948	Msa0701610:five_prime_UTR	35.0%
	CAAAATCTACCATGATCACT+AGG	+	chr4_4:73042047-73042066	None:intergenic	35.0%
!	CTAGTGATCATGGTAGATTT+TGG	-	chr4_4:73042045-73042064	Msa0701610:five_prime_UTR	35.0%
	AAACAATCATCCAGAACAGA+TGG	-	chr4_4:73042085-73042104	Msa0701610:five_prime_UTR	35.0%
	AACAATCATCCAGAACAGAT+GGG	-	chr4_4:73042086-73042105	Msa0701610:five_prime_UTR	35.0%
	CATATTTCATACTTTGGCTG+AGG	-	chr4_4:73042224-73042243	Msa0701610:five_prime_UTR	35.0%
	CTATTGCAGACAAAAACCAA+TGG	+	chr4_4:73042276-73042295	None:intergenic	35.0%
	ATTGGGGATTGATTAGGTTC+TGG	-	chr4_4:73040718-73040737	Msa0701610:CDS	40.0%
	TTGGGGATTGATTAGGTTCT+GGG	-	chr4_4:73040719-73040738	Msa0701610:CDS	40.0%
	TGAGGGTGAGATTTGTCAAT+TGG	-	chr4_4:73040758-73040777	Msa0701610:CDS	40.0%
	GAGGGTGAGATTTGTCAATT+GGG	-	chr4_4:73040759-73040778	Msa0701610:CDS	40.0%
!!!	TTTTGAGTGATGGATGAAGC+TGG	-	chr4_4:73040803-73040822	Msa0701610:CDS	40.0%
	TAAGTCTTTGCCAGAAAAGG+AGG	+	chr4_4:73040845-73040864	None:intergenic	40.0%
	GGCAAAGACTTATGAAATGG+TGG	-	chr4_4:73040853-73040872	Msa0701610:CDS	40.0%
	CGAACAAAAGTTTCGTTGTG+TGG	-	chr4_4:73040915-73040934	Msa0701610:CDS	40.0%
	ATTCAGCTGCCTGATAAAAC+TGG	+	chr4_4:73040999-73041018	None:intergenic	40.0%
!	GGGATTTAGGAAAGTTGATC+CGG	-	chr4_4:73041143-73041162	Msa0701610:CDS	40.0%
	TGCAGAGAATGACTATGAAC+GGG	+	chr4_4:73041243-73041262	None:intergenic	40.0%
	GAAGAGATACCAGCATGATT+GGG	-	chr4_4:73041365-73041384	Msa0701610:intron	40.0%
	GCATTGTTCGAAAGATCAGT+TGG	-	chr4_4:73041407-73041426	Msa0701610:intron	40.0%
!	AGCTAGTGTTGAAGATGCTA+TGG	-	chr4_4:73041578-73041597	Msa0701610:CDS	40.0%
!	TTATCCTCTGGATTTTCCCT+GGG	+	chr4_4:73041621-73041640	None:intergenic	40.0%
	GTCAAAGTAGAGTTATCCTC+TGG	+	chr4_4:73041633-73041652	None:intergenic	40.0%
!!	CTCAAGTTGATCCAATCTCT+CGG	+	chr4_4:73041664-73041683	None:intergenic	40.0%
	CGTTCACACTCATTCAAACA+TGG	-	chr4_4:73041734-73041753	Msa0701610:five_prime_UTR	40.0%
	CTGGGGTTAATGATGTATTC+TGG	-	chr4_4:73041928-73041947	Msa0701610:five_prime_UTR	40.0%
	GAAGGAAAACCTAGTGATCA+TGG	-	chr4_4:73042035-73042054	Msa0701610:five_prime_UTR	40.0%
!	GTGATCATGGTAGATTTTGG+TGG	-	chr4_4:73042048-73042067	Msa0701610:five_prime_UTR	40.0%
!!	GTAGATTTTGGTGGAACATG+CGG	-	chr4_4:73042057-73042076	Msa0701610:five_prime_UTR	40.0%
	ACAATCATCCAGAACAGATG+GGG	-	chr4_4:73042087-73042106	Msa0701610:five_prime_UTR	40.0%
!	CAAAGATTGTGTCACTCCAT+TGG	-	chr4_4:73042257-73042276	Msa0701610:five_prime_UTR	40.0%
	ATTGGGGATTGATTAGGTTC+TGG	-	chr4_4:73040718-73040737	Msa0701610:CDS	40.0%
	TTGGGGATTGATTAGGTTCT+GGG	-	chr4_4:73040719-73040738	Msa0701610:CDS	40.0%
	TGAGGGTGAGATTTGTCAAT+TGG	-	chr4_4:73040758-73040777	Msa0701610:CDS	40.0%
	GAGGGTGAGATTTGTCAATT+GGG	-	chr4_4:73040759-73040778	Msa0701610:CDS	40.0%
!!!	TTTTGAGTGATGGATGAAGC+TGG	-	chr4_4:73040803-73040822	Msa0701610:CDS	40.0%
	TAAGTCTTTGCCAGAAAAGG+AGG	+	chr4_4:73040845-73040864	None:intergenic	40.0%
	GGCAAAGACTTATGAAATGG+TGG	-	chr4_4:73040853-73040872	Msa0701610:CDS	40.0%
	CGAACAAAAGTTTCGTTGTG+TGG	-	chr4_4:73040915-73040934	Msa0701610:CDS	40.0%
	ATTCAGCTGCCTGATAAAAC+TGG	+	chr4_4:73040999-73041018	None:intergenic	40.0%
!	GGGATTTAGGAAAGTTGATC+CGG	-	chr4_4:73041143-73041162	Msa0701610:CDS	40.0%
	TGCAGAGAATGACTATGAAC+GGG	+	chr4_4:73041243-73041262	None:intergenic	40.0%
	GAAGAGATACCAGCATGATT+GGG	-	chr4_4:73041365-73041384	Msa0701610:intron	40.0%
	GCATTGTTCGAAAGATCAGT+TGG	-	chr4_4:73041407-73041426	Msa0701610:intron	40.0%
!	AGCTAGTGTTGAAGATGCTA+TGG	-	chr4_4:73041578-73041597	Msa0701610:CDS	40.0%
!	TTATCCTCTGGATTTTCCCT+GGG	+	chr4_4:73041621-73041640	None:intergenic	40.0%
	GTCAAAGTAGAGTTATCCTC+TGG	+	chr4_4:73041633-73041652	None:intergenic	40.0%
!!	CTCAAGTTGATCCAATCTCT+CGG	+	chr4_4:73041664-73041683	None:intergenic	40.0%
	CGTTCACACTCATTCAAACA+TGG	-	chr4_4:73041734-73041753	Msa0701610:five_prime_UTR	40.0%
	CTGGGGTTAATGATGTATTC+TGG	-	chr4_4:73041928-73041947	Msa0701610:five_prime_UTR	40.0%
	GAAGGAAAACCTAGTGATCA+TGG	-	chr4_4:73042035-73042054	Msa0701610:five_prime_UTR	40.0%
!	GTGATCATGGTAGATTTTGG+TGG	-	chr4_4:73042048-73042067	Msa0701610:five_prime_UTR	40.0%
!!	GTAGATTTTGGTGGAACATG+CGG	-	chr4_4:73042057-73042076	Msa0701610:five_prime_UTR	40.0%
	ACAATCATCCAGAACAGATG+GGG	-	chr4_4:73042087-73042106	Msa0701610:five_prime_UTR	40.0%
!	CAAAGATTGTGTCACTCCAT+TGG	-	chr4_4:73042257-73042276	Msa0701610:five_prime_UTR	40.0%
	AATACGTTGACCTTCTGCTC+AGG	-	chr4_4:73040153-73040172	Msa0701610:three_prime_UTR	45.0%
!	AAGTTCTCTGCCTCCTTTTC+TGG	-	chr4_4:73040832-73040851	Msa0701610:CDS	45.0%
!!	AATGGTGGATGATCGATCCT+CGG	-	chr4_4:73040868-73040887	Msa0701610:CDS	45.0%
	GATGCACTCCACGAAACAAT+AGG	+	chr4_4:73040896-73040915	None:intergenic	45.0%
	TTTCGTTGTGTGGAATCCTC+CGG	-	chr4_4:73040925-73040944	Msa0701610:CDS	45.0%
	AGCAAAACCCTTGCGAATTC+CGG	+	chr4_4:73040947-73040966	None:intergenic	45.0%
	CGAAGAGATACCAGCATGAT+TGG	-	chr4_4:73041364-73041383	Msa0701610:intron	45.0%
	GATACCAGCATGATTGGGAA+AGG	-	chr4_4:73041370-73041389	Msa0701610:intron	45.0%
	CTGCAATGCTTCAGAAACAG+AGG	+	chr4_4:73041466-73041485	None:intergenic	45.0%
	TGCTGTAAATCTCTTGCCAC+TGG	-	chr4_4:73041497-73041516	Msa0701610:CDS	45.0%
	AAGCCATGGAGAGAAAACGA+AGG	-	chr4_4:73041523-73041542	Msa0701610:CDS	45.0%
!	CAACCTTCGTTTTCTCTCCA+TGG	+	chr4_4:73041529-73041548	None:intergenic	45.0%
	TTAAAGCAACCACTTCTCGC+CGG	+	chr4_4:73041552-73041571	None:intergenic	45.0%
!	GTTATCCTCTGGATTTTCCC+TGG	+	chr4_4:73041622-73041641	None:intergenic	45.0%
	GACGTTAAACACCGAGAGAT+TGG	-	chr4_4:73041650-73041669	Msa0701610:exon	45.0%
	CGAGAGATTGGATCAACTTG+AGG	-	chr4_4:73041662-73041681	Msa0701610:exon	45.0%
	AAGAGTCTCCCAAAATGCCA+CGG	+	chr4_4:73041691-73041710	None:intergenic	45.0%
	GAGACTCTTGCACATGAAGT+TGG	-	chr4_4:73041702-73041721	Msa0701610:five_prime_UTR	45.0%
	AATACGTTGACCTTCTGCTC+AGG	-	chr4_4:73040153-73040172	Msa0701610:three_prime_UTR	45.0%
!	AAGTTCTCTGCCTCCTTTTC+TGG	-	chr4_4:73040832-73040851	Msa0701610:CDS	45.0%
!!	AATGGTGGATGATCGATCCT+CGG	-	chr4_4:73040868-73040887	Msa0701610:CDS	45.0%
	GATGCACTCCACGAAACAAT+AGG	+	chr4_4:73040896-73040915	None:intergenic	45.0%
	TTTCGTTGTGTGGAATCCTC+CGG	-	chr4_4:73040925-73040944	Msa0701610:CDS	45.0%
	AGCAAAACCCTTGCGAATTC+CGG	+	chr4_4:73040947-73040966	None:intergenic	45.0%
	CGAAGAGATACCAGCATGAT+TGG	-	chr4_4:73041364-73041383	Msa0701610:intron	45.0%
	GATACCAGCATGATTGGGAA+AGG	-	chr4_4:73041370-73041389	Msa0701610:intron	45.0%
	CTGCAATGCTTCAGAAACAG+AGG	+	chr4_4:73041466-73041485	None:intergenic	45.0%
	TGCTGTAAATCTCTTGCCAC+TGG	-	chr4_4:73041497-73041516	Msa0701610:CDS	45.0%
	AAGCCATGGAGAGAAAACGA+AGG	-	chr4_4:73041523-73041542	Msa0701610:CDS	45.0%
!	CAACCTTCGTTTTCTCTCCA+TGG	+	chr4_4:73041529-73041548	None:intergenic	45.0%
	TTAAAGCAACCACTTCTCGC+CGG	+	chr4_4:73041552-73041571	None:intergenic	45.0%
!	GTTATCCTCTGGATTTTCCC+TGG	+	chr4_4:73041622-73041641	None:intergenic	45.0%
	GACGTTAAACACCGAGAGAT+TGG	-	chr4_4:73041650-73041669	Msa0701610:exon	45.0%
	CGAGAGATTGGATCAACTTG+AGG	-	chr4_4:73041662-73041681	Msa0701610:exon	45.0%
	AAGAGTCTCCCAAAATGCCA+CGG	+	chr4_4:73041691-73041710	None:intergenic	45.0%
	GAGACTCTTGCACATGAAGT+TGG	-	chr4_4:73041702-73041721	Msa0701610:five_prime_UTR	45.0%
	AACAACGGCGCTAACGTTGT+TGG	+	chr4_4:73040344-73040363	None:intergenic	50.0%
	CCACGAAACAATAGGATCCG+AGG	+	chr4_4:73040888-73040907	None:intergenic	50.0%
	CCTCGGATCCTATTGTTTCG+TGG	-	chr4_4:73040885-73040904	Msa0701610:CDS	50.0%
	GAATCCTCCGGAATTCGCAA+GGG	-	chr4_4:73040937-73040956	Msa0701610:CDS	50.0%
	AAAACCCTTGCGAATTCCGG+AGG	+	chr4_4:73040944-73040963	None:intergenic	50.0%
!	GAAAGTTGATCCGGAGCAGT+GGG	-	chr4_4:73041152-73041171	Msa0701610:CDS	50.0%
	TTGGCAAATTCCCACTGCTC+CGG	+	chr4_4:73041165-73041184	None:intergenic	50.0%
	TCAAGCACAAGCCCCTCTAA+CGG	-	chr4_4:73041269-73041288	Msa0701610:CDS	50.0%
	CCTTTCAGACTCCGTTAGAG+GGG	+	chr4_4:73041283-73041302	None:intergenic	50.0%
	GCCTTTCAGACTCCGTTAGA+GGG	+	chr4_4:73041284-73041303	None:intergenic	50.0%
	TGCCTTTCAGACTCCGTTAG+AGG	+	chr4_4:73041285-73041304	None:intergenic	50.0%
	GGATAGAGAACAACTCCTCG+TGG	-	chr4_4:73041338-73041357	Msa0701610:intron	50.0%
	CATGCCTTTCCCAATCATGC+TGG	+	chr4_4:73041377-73041396	None:intergenic	50.0%
	GGAGAGAAAACGAAGGTTGC+CGG	-	chr4_4:73041530-73041549	Msa0701610:CDS	50.0%
!	AGACTTCTGTAGCTTTGCCC+AGG	-	chr4_4:73041601-73041620	Msa0701610:CDS	50.0%
!	GACTTCTGTAGCTTTGCCCA+GGG	-	chr4_4:73041602-73041621	Msa0701610:CDS	50.0%
	TTTGCCCAGGGAAAATCCAG+AGG	-	chr4_4:73041614-73041633	Msa0701610:CDS	50.0%
!!	TTGAGGCATCCGTGGCATTT+TGG	-	chr4_4:73041679-73041698	Msa0701610:five_prime_UTR	50.0%
!!	TGAGGCATCCGTGGCATTTT+GGG	-	chr4_4:73041680-73041699	Msa0701610:five_prime_UTR	50.0%
	AGAATCACCACTGCAGCAAC+TGG	-	chr4_4:73041909-73041928	Msa0701610:five_prime_UTR	50.0%
	GAATCACCACTGCAGCAACT+GGG	-	chr4_4:73041910-73041929	Msa0701610:five_prime_UTR	50.0%
	AATCACCACTGCAGCAACTG+GGG	-	chr4_4:73041911-73041930	Msa0701610:five_prime_UTR	50.0%
	ATTAACCCCAGTTGCTGCAG+TGG	+	chr4_4:73041919-73041938	None:intergenic	50.0%
	CTGGGAACAGTTCTTGACAG+AGG	-	chr4_4:73041947-73041966	Msa0701610:five_prime_UTR	50.0%
	CAGTTCTTGACAGAGGATCC+TGG	-	chr4_4:73041954-73041973	Msa0701610:five_prime_UTR	50.0%
	CTAACATGCCCCATCTGTTC+TGG	+	chr4_4:73042098-73042117	None:intergenic	50.0%
	AACAACGGCGCTAACGTTGT+TGG	+	chr4_4:73040344-73040363	None:intergenic	50.0%
	CCACGAAACAATAGGATCCG+AGG	+	chr4_4:73040888-73040907	None:intergenic	50.0%
	CCTCGGATCCTATTGTTTCG+TGG	-	chr4_4:73040885-73040904	Msa0701610:CDS	50.0%
	GAATCCTCCGGAATTCGCAA+GGG	-	chr4_4:73040937-73040956	Msa0701610:CDS	50.0%
	AAAACCCTTGCGAATTCCGG+AGG	+	chr4_4:73040944-73040963	None:intergenic	50.0%
!	GAAAGTTGATCCGGAGCAGT+GGG	-	chr4_4:73041152-73041171	Msa0701610:CDS	50.0%
	TTGGCAAATTCCCACTGCTC+CGG	+	chr4_4:73041165-73041184	None:intergenic	50.0%
	TCAAGCACAAGCCCCTCTAA+CGG	-	chr4_4:73041269-73041288	Msa0701610:CDS	50.0%
	CCTTTCAGACTCCGTTAGAG+GGG	+	chr4_4:73041283-73041302	None:intergenic	50.0%
	GCCTTTCAGACTCCGTTAGA+GGG	+	chr4_4:73041284-73041303	None:intergenic	50.0%
	TGCCTTTCAGACTCCGTTAG+AGG	+	chr4_4:73041285-73041304	None:intergenic	50.0%
	GGATAGAGAACAACTCCTCG+TGG	-	chr4_4:73041338-73041357	Msa0701610:intron	50.0%
	CATGCCTTTCCCAATCATGC+TGG	+	chr4_4:73041377-73041396	None:intergenic	50.0%
	GGAGAGAAAACGAAGGTTGC+CGG	-	chr4_4:73041530-73041549	Msa0701610:CDS	50.0%
!	AGACTTCTGTAGCTTTGCCC+AGG	-	chr4_4:73041601-73041620	Msa0701610:CDS	50.0%
!	GACTTCTGTAGCTTTGCCCA+GGG	-	chr4_4:73041602-73041621	Msa0701610:CDS	50.0%
	TTTGCCCAGGGAAAATCCAG+AGG	-	chr4_4:73041614-73041633	Msa0701610:CDS	50.0%
!!	TTGAGGCATCCGTGGCATTT+TGG	-	chr4_4:73041679-73041698	Msa0701610:five_prime_UTR	50.0%
!!	TGAGGCATCCGTGGCATTTT+GGG	-	chr4_4:73041680-73041699	Msa0701610:five_prime_UTR	50.0%
	AGAATCACCACTGCAGCAAC+TGG	-	chr4_4:73041909-73041928	Msa0701610:five_prime_UTR	50.0%
	GAATCACCACTGCAGCAACT+GGG	-	chr4_4:73041910-73041929	Msa0701610:five_prime_UTR	50.0%
	AATCACCACTGCAGCAACTG+GGG	-	chr4_4:73041911-73041930	Msa0701610:five_prime_UTR	50.0%
	ATTAACCCCAGTTGCTGCAG+TGG	+	chr4_4:73041919-73041938	None:intergenic	50.0%
	CTGGGAACAGTTCTTGACAG+AGG	-	chr4_4:73041947-73041966	Msa0701610:five_prime_UTR	50.0%
	CAGTTCTTGACAGAGGATCC+TGG	-	chr4_4:73041954-73041973	Msa0701610:five_prime_UTR	50.0%
	CTAACATGCCCCATCTGTTC+TGG	+	chr4_4:73042098-73042117	None:intergenic	50.0%
	GGAATCCTCCGGAATTCGCA+AGG	-	chr4_4:73040936-73040955	Msa0701610:CDS	55.0%
!	GGAAAGTTGATCCGGAGCAG+TGG	-	chr4_4:73041151-73041170	Msa0701610:CDS	55.0%
	CCCCTCTAACGGAGTCTGAA+AGG	-	chr4_4:73041280-73041299	Msa0701610:CDS	55.0%
	GGTATCTCTTCGTCTCCACG+AGG	+	chr4_4:73041356-73041375	None:intergenic	55.0%
!	GGATCAACTTGAGGCATCCG+TGG	-	chr4_4:73041671-73041690	Msa0701610:five_prime_UTR	55.0%
	GACAGAGGATCCTGGTGCAT+CGG	-	chr4_4:73041962-73041981	Msa0701610:five_prime_UTR	55.0%
	GGAATCCTCCGGAATTCGCA+AGG	-	chr4_4:73040936-73040955	Msa0701610:CDS	55.0%
!	GGAAAGTTGATCCGGAGCAG+TGG	-	chr4_4:73041151-73041170	Msa0701610:CDS	55.0%
	CCCCTCTAACGGAGTCTGAA+AGG	-	chr4_4:73041280-73041299	Msa0701610:CDS	55.0%
	GGTATCTCTTCGTCTCCACG+AGG	+	chr4_4:73041356-73041375	None:intergenic	55.0%
!	GGATCAACTTGAGGCATCCG+TGG	-	chr4_4:73041671-73041690	Msa0701610:five_prime_UTR	55.0%
	GACAGAGGATCCTGGTGCAT+CGG	-	chr4_4:73041962-73041981	Msa0701610:five_prime_UTR	55.0%
	CTTGCCACTGGCAGAAGCCA+TGG	-	chr4_4:73041509-73041528	Msa0701610:CDS	60.0%
	CTCTCCATGGCTTCTGCCAG+TGG	+	chr4_4:73041516-73041535	None:intergenic	60.0%
	ACCAGCTGCTGCTGCTCTTG+AGG	-	chr4_4:73041860-73041879	Msa0701610:five_prime_UTR	60.0%
	GCTGCAGTGGTGATTCTCGC+AGG	+	chr4_4:73041906-73041925	None:intergenic	60.0%
!	TCCTGGTGCATCGGAAGCAC+AGG	-	chr4_4:73041971-73041990	Msa0701610:five_prime_UTR	60.0%
	TCCTGTGCTTCCGATGCACC+AGG	+	chr4_4:73041975-73041994	None:intergenic	60.0%
	CTTGCCACTGGCAGAAGCCA+TGG	-	chr4_4:73041509-73041528	Msa0701610:CDS	60.0%
	CTCTCCATGGCTTCTGCCAG+TGG	+	chr4_4:73041516-73041535	None:intergenic	60.0%
	ACCAGCTGCTGCTGCTCTTG+AGG	-	chr4_4:73041860-73041879	Msa0701610:five_prime_UTR	60.0%
	GCTGCAGTGGTGATTCTCGC+AGG	+	chr4_4:73041906-73041925	None:intergenic	60.0%
!	TCCTGGTGCATCGGAAGCAC+AGG	-	chr4_4:73041971-73041990	Msa0701610:five_prime_UTR	60.0%
	TCCTGTGCTTCCGATGCACC+AGG	+	chr4_4:73041975-73041994	None:intergenic	60.0%
	CGAAGGTTGCCGGCGAGAAG+TGG	-	chr4_4:73041540-73041559	Msa0701610:CDS	65.0%
	GCCTCAAGAGCAGCAGCAGC+TGG	+	chr4_4:73041864-73041883	None:intergenic	65.0%
	CGAAGGTTGCCGGCGAGAAG+TGG	-	chr4_4:73041540-73041559	Msa0701610:CDS	65.0%
	GCCTCAAGAGCAGCAGCAGC+TGG	+	chr4_4:73041864-73041883	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_4	gene	73040125	73042350	73040125	ID=Msa0701610;Name=Msa0701610
chr4_4	mRNA	73040125	73042350	73040125	ID=Msa0701610-mRNA-1;Parent=Msa0701610;Name=Msa0701610-mRNA-1;_AED=0.01;_eAED=0.01;_QI=687\|1\|1\|1\|1\|1\|2\|214\|401
chr4_4	exon	73040125	73041331	73040125	ID=Msa0701610-mRNA-1:exon:22366;Parent=Msa0701610-mRNA-1
chr4_4	exon	73041451	73042350	73041451	ID=Msa0701610-mRNA-1:exon:22365;Parent=Msa0701610-mRNA-1
chr4_4	five_prime_UTR	73041664	73042350	73041664	ID=Msa0701610-mRNA-1:five_prime_utr;Parent=Msa0701610-mRNA-1
chr4_4	CDS	73041451	73041663	73041451	ID=Msa0701610-mRNA-1:cds;Parent=Msa0701610-mRNA-1
chr4_4	CDS	73040339	73041331	73040339	ID=Msa0701610-mRNA-1:cds;Parent=Msa0701610-mRNA-1
chr4_4	three_prime_UTR	73040125	73040338	73040125	ID=Msa0701610-mRNA-1:three_prime_utr;Parent=Msa0701610-mRNA-1

Gene Sequence

>Msa0701610

ATGGATGAAGCTGGAAGTTCAAGTTCTCTGCCTCCTTTTCTGGCAAAGACTTATGAAATGGTGGATGATCGATCCTCGGATCCTATTGTTTCGTGGAGTGCATCGAACAAAAGTTTCGTTGTGTGGAATCCTCCGGAATTCGCAAGGGTTTTGCTTCCGAGATTCTTTAAGCACAATAACTTCTCCAGTTTTATCAGGCAGCTGAATACATATGGATTTAGGAAAGTTGATCCGGAGCAGTGGGAATTTGCCAATGATGATTTTATAAGGGGGCAACCGCATCTGATGAAGAATATTCATAGACGGAAGCCCGTTCATAGTCATTCTCTGCATAATCTTCAAGCACAAGCCCCTCTAACGGAGTCTGAAAGGCAGAGTATGATTGATGAAATAGAGAAGCTGAAACAGGATAGAGAACAACTCCTCGTGGAGACGAAGAGATACCAGCATGATTGGGAAAGGCATGAGATTCAAATGCATTGTTCGAAAGATCAGTTGGAAAAATTGGAACATAAACAACAAAAGATGTTGTCCTCTGTTTCTGAAGCATTGCAGAAACCTATGATTGCTGTAAATCTCTTGCCACTGGCAGAAGCCATGGAGAGAAAACGAAGGTTGCCGGCGAGAAGTGGTTGCTTTAATAATGAAGCTAGTGTTGAAGATGCTATGGAGACTTCTGTAGCTTTGCCCAGGGAAAATCCAGAGGATAACTCTACTTTGACGTTAAACACCGAGAGATTGGATCAACTTGAGGCATCCGTGGCATTTTGGGAGACTCTTGCACATGAAGTTGGCGACAATTTCGTTCACACTCATTCAAACATGGATTTGGATGAATCTACATGCTGTGCTGATAGTTTGTCGATATCTTGTCAGCAACTAGACGGTGAAGTTCGACCTAAGTCACCTGAAATTGACATGAACGTTGAACCAGCTGCTGCTGCTCTTGAGGCTGTTGCAGTAAAAGAACAACCTGCGAGAATCACCACTGCAGCAACTGGGGTTAATGATGTATTCTGGGAACAGTTCTTGACAGAGGATCCTGGTGCATCGGAAGCACAGGAAGTGCAATCAGAAAGAAAAGATAATAGTAGCAGAAAAAATGAAGGAAAACCTAGTGATCATGGTAGATTTTGGTGGAACATGCGGAAATCAAACAATCATCCAGAACAGATGGGGCATGTTAGTCAAGTAGAGAAAATTTAG

Protein sequence

>Msa0701610

MDEAGSSSSLPPFLAKTYEMVDDRSSDPIVSWSASNKSFVVWNPPEFARVLLPRFFKHNNFSSFIRQLNTYGFRKVDPEQWEFANDDFIRGQPHLMKNIHRRKPVHSHSLHNLQAQAPLTESERQSMIDEIEKLKQDREQLLVETKRYQHDWERHEIQMHCSKDQLEKLEHKQQKMLSSVSEALQKPMIAVNLLPLAEAMERKRRLPARSGCFNNEASVEDAMETSVALPRENPEDNSTLTLNTERLDQLEASVAFWETLAHEVGDNFVHTHSNMDLDESTCCADSLSISCQQLDGEVRPKSPEIDMNVEPAAAALEAVAVKEQPARITTAATGVNDVFWEQFLTEDPGASEAQEVQSERKDNSSRKNEGKPSDHGRFWWNMRKSNNHPEQMGHVSQVEKI*