AlfalfaGEDB | Msa0618630

M. sativa cultivar zhongmu-4 / Msa0618630

KEGG: K09414|K09419
GO: GO:0000003 GO:0000302 GO:0003006 GO:0003674 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006979 GO:0007275 GO:0008150 GO:0009266 GO:0009408 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009958 GO:0010033 GO:0010154 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022414 GO:0022622 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046983 GO:0048364 GO:0048518 GO:0048522 GO:0048527 GO:0048528 GO:0048530 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090696 GO:0090698 GO:0099402 GO:0140110 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
PFAM: PF00447.20

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0618630	XP_003629847.1	97.257	401	11	0	1	401	1	401	0.0	814

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0618630	sp\|O49403\|HFA4A_ARATH	51.095	411	179	11	1	400	1	400	4.06e-114	342

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0618630	G7L7A0	97.257	401	11	0	1	401	1	401	0.0	814

TFs/TRs:

Gene ID	Type	Classification
Msa0618630	TF	HSF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0614350	Msa0618630	0.807940	3.953398e-50	-8.615850e-47
Msa0618630	Msa0638990	0.807248	5.546712e-50	-8.615850e-47
Msa0618630	Msa0657510	0.903869	2.218765e-79	-8.615850e-47
Msa0618630	Msa0697570	0.848826	4.784644e-60	-8.615850e-47
Msa0618630	Msa0701610	0.927032	2.065696e-91	-8.615850e-47
Msa0618630	Msa1317900	0.800006	1.764671e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0618630	MtrunA17_Chr8g0379701	97.257	401	11	0	1	401	1	401	0.0	814
Msa0618630	MtrunA17_Chr2g0284481	40.633	411	186	9	1	383	2	382	5.40e-87	269
Msa0618630	MtrunA17_Chr6g0467041	36.212	359	177	9	6	358	16	328	2.88e-63	206
Msa0618630	MtrunA17_Chr5g0410881	51.630	184	82	1	11	187	31	214	8.86e-61	204
Msa0618630	MtrunA17_Chr8g0378061	52.239	201	84	4	13	207	23	217	1.51e-60	203
Msa0618630	MtrunA17_Chr2g0330821	49.744	195	86	2	1	187	60	250	1.07e-53	182
Msa0618630	MtrunA17_Chr1g0204741	36.082	291	166	4	11	288	39	322	8.55e-53	179
Msa0618630	MtrunA17_Chr4g0039891	44.865	185	94	2	10	187	10	193	1.17e-51	180
Msa0618630	MtrunA17_Chr4g0071051	47.486	179	87	1	11	189	100	271	2.86e-51	177
Msa0618630	MtrunA17_Chr7g0260331	39.130	230	126	3	11	226	48	277	7.08e-49	169
Msa0618630	MtrunA17_Chr3g0135831	41.584	202	114	1	11	208	45	246	8.50e-47	164
Msa0618630	MtrunA17_Chr8g0392001	46.875	192	91	3	12	194	22	211	8.74e-46	161
Msa0618630	MtrunA17_Chr1g0185131	42.541	181	87	3	12	189	32	198	1.68e-43	154
Msa0618630	MtrunA17_Chr6g0485571	38.308	201	116	2	10	206	9	205	3.40e-41	148
Msa0618630	MtrunA17_Chr5g0397881	64.356	101	35	1	4	103	15	115	6.37e-41	148
Msa0618630	MtrunA17_Chr3g0134031	64.646	99	34	1	6	103	17	115	2.15e-39	144
Msa0618630	MtrunA17_Chr5g0441531	66.667	99	32	1	6	103	18	116	6.59e-39	140
Msa0618630	MtrunA17_Chr5g0402291	58.824	102	42	0	8	109	5	106	7.79e-39	140
Msa0618630	MtrunA17_Chr8g0375041	41.139	158	93	0	12	169	9	166	2.13e-36	133
Msa0618630	MtrunA17_Chr1g0203601	40.854	164	70	2	8	144	14	177	2.55e-36	134
Msa0618630	MtrunA17_Chr6g0472421	59.596	99	39	1	6	103	26	124	6.06e-36	134
Msa0618630	MtrunA17_Chr7g0257331	49.123	114	58	0	3	116	13	126	2.12e-34	127
Msa0618630	MtrunA17_Chr4g0047421	37.714	175	91	5	12	176	33	199	5.48e-30	115
Msa0618630	MtrunA17_Chr1g0179321	68.750	64	20	0	8	71	45	108	1.75e-26	102
Msa0618630	MtrunA17_Chr2g0301521	44.286	140	74	2	96	232	1	139	1.87e-25	101
Msa0618630	MtrunA17_Chr2g0330841	39.716	141	76	2	72	207	41	177	6.52e-23	99.8
Msa0618630	MtrunA17_Chr4g0023771	63.492	63	22	1	10	71	13	75	3.12e-22	90.9
Msa0618630	MtrunA17_Chr1g0179311	27.869	122	86	1	72	193	14	133	9.63e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0618630	AT4G18880.1	51.095	411	179	11	1	400	1	400	4.13e-115	342
Msa0618630	AT5G45710.3	49.492	394	145	8	1	391	1	343	2.38e-110	328
Msa0618630	AT5G45710.1	49.492	394	145	8	1	391	1	343	2.38e-110	328
Msa0618630	AT4G13980.1	48.500	200	94	2	13	207	24	219	2.34e-59	200
Msa0618630	AT1G32330.2	41.949	236	118	2	6	222	31	266	1.27e-58	198
Msa0618630	AT1G32330.1	41.949	236	118	2	6	222	31	266	1.57e-58	198
Msa0618630	AT5G45710.4	40.940	298	123	8	96	391	1	247	1.82e-55	183
Msa0618630	AT5G45710.2	40.940	298	123	8	96	391	1	247	1.82e-55	183
Msa0618630	AT5G16820.1	42.991	214	109	2	8	208	23	236	1.49e-54	187
Msa0618630	AT5G16820.2	42.991	214	109	2	8	208	23	236	1.49e-54	187
Msa0618630	AT4G17750.1	45.026	191	91	1	11	187	51	241	7.87e-54	186
Msa0618630	AT3G22830.1	41.256	223	117	2	8	216	57	279	1.97e-53	183
Msa0618630	AT3G02990.1	47.283	184	93	1	8	187	19	202	3.95e-53	184
Msa0618630	AT2G26150.1	41.262	206	113	1	11	208	43	248	2.34e-50	173
Msa0618630	AT2G26150.4	41.262	206	113	1	11	208	43	248	2.34e-50	173
Msa0618630	AT5G03720.2	45.810	179	89	2	10	185	53	226	7.62e-49	171
Msa0618630	AT5G03720.1	45.810	179	89	2	10	185	53	226	7.62e-49	171
Msa0618630	AT5G43840.1	43.000	200	90	3	11	208	16	193	1.39e-46	161
Msa0618630	AT1G67970.1	43.386	189	100	3	10	194	17	202	1.75e-45	161
Msa0618630	AT3G51910.1	45.652	184	85	3	11	194	28	196	4.40e-44	154
Msa0618630	AT5G54070.1	39.698	199	110	2	10	208	69	257	3.49e-41	148
Msa0618630	AT3G24520.1	39.247	186	86	4	10	195	15	173	1.73e-40	147
Msa0618630	AT1G46264.1	63.000	100	36	1	5	103	26	125	1.82e-39	144
Msa0618630	AT3G63350.1	38.725	204	111	3	1	204	21	210	1.94e-39	142
Msa0618630	AT5G62020.1	51.181	127	57	2	3	128	13	135	2.12e-38	140
Msa0618630	AT4G36990.1	63.265	98	35	1	9	105	10	107	9.25e-38	138
Msa0618630	AT4G11660.1	59.596	99	39	1	6	103	52	150	1.68e-36	137
Msa0618630	AT2G41690.1	58.491	106	43	1	11	115	39	144	2.23e-36	133
Msa0618630	AT4G18870.1	54.639	97	39	2	5	99	6	99	6.37e-27	109
Msa0618630	AT4G18870.1	52.174	92	44	0	8	99	142	233	2.08e-26	107
Msa0618630	AT1G77570.1	43.333	90	48	2	13	99	27	116	1.46e-17	79.3
Msa0618630	AT2G26150.3	33.621	116	77	0	72	187	49	164	1.15e-16	80.1
Msa0618630	AT2G26150.2	33.621	116	77	0	72	187	49	164	1.15e-16	80.1
Msa0618630	AT4G19630.1	38.947	95	55	1	8	99	7	101	2.16e-15	72.8

Find 115 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTGATTATTGATTGATTATC+AGG	0.127885	4_2:-69561357	Msa0618630:five_prime_UTR
TTGAGGCATCCGTGGCATTT+TGG	0.204494	4_2:-69560237	Msa0618630:CDS
ATTGGGAATTGATTAGGTTT+TGG	0.243435	4_2:-69561140	Msa0618630:five_prime_UTR
TCAACGTTCATGTCAATTTC+AGG	0.245219	4_2:+69560079	None:intergenic
TAACGTTGTTGGATCTTAAA+AGG	0.263526	4_2:+69561583	None:intergenic
AGAATATATATAAGGTGATT+TGG	0.271218	4_2:-69561241	Msa0618630:five_prime_UTR
ATATGTATGTGCAGGGATTT+AGG	0.272285	4_2:-69560786	Msa0618630:intron
AGCAAAACCCTTGCGAATTC+CGG	0.278319	4_2:+69560972	None:intergenic
TAGCTATTGATTATTTCTTC+TGG	0.284577	4_2:-69559779	Msa0618630:three_prime_UTR
GAATATATATAAGGTGATTT+GGG	0.287886	4_2:-69561240	Msa0618630:five_prime_UTR
CACTCATTCAAACATGGATT+TGG	0.293073	4_2:-69560176	Msa0618630:CDS
CTGGGGTTAATGATGTATTC+TGG	0.294292	4_2:-69559988	Msa0618630:CDS
GACTGTTCTTCTTTGTGATT+AGG	0.296163	4_2:-69561392	Msa0618630:five_prime_UTR
ATTGGGGATTGATTAGGTTC+TGG	0.305724	4_2:-69561198	Msa0618630:five_prime_UTR
TTTCTTCCAGAATATATATA+AGG	0.307353	4_2:-69561249	Msa0618630:five_prime_UTR
CTAACATGCCCCATCTGTTC+TGG	0.312124	4_2:+69559821	None:intergenic
TTGGGGATTGATTAGGTTCT+GGG	0.319125	4_2:-69561197	Msa0618630:five_prime_UTR
TCTTCTTTGTGATTAGGTTA+TGG	0.325896	4_2:-69561386	Msa0618630:five_prime_UTR
ATACTTTGATTAGAGGGTTA+TGG	0.332997	4_2:-69561414	Msa0618630:five_prime_UTR
CTTGGTTATACTTTGATTAG+AGG	0.334009	4_2:-69561421	Msa0618630:five_prime_UTR
TTGTCAATTGGGAATTGATT+AGG	0.337277	4_2:-69561146	Msa0618630:five_prime_UTR
CGAAGAGATACCAGCATGAT+TGG	0.339945	4_2:-69560552	Msa0618630:CDS
TGCAATTTCCAAGGAAAACT+TGG	0.343304	4_2:+69561491	None:intergenic
CTAGTGATCATGGTAGATTT+TGG	0.344391	4_2:-69559871	Msa0618630:CDS
TGAGGGTGAGATTTGTCAAT+TGG	0.347645	4_2:-69561158	Msa0618630:five_prime_UTR
AGAATCACCACTGCAGCAAC+TGG	0.356379	4_2:-69560007	Msa0618630:CDS
AAGAGATTTACAGCAATCAT+AGG	0.368528	4_2:+69560427	None:intergenic
GACGTTAAACACCGAGAGAT+TGG	0.369357	4_2:-69560266	Msa0618630:CDS
TGCCTTTCAGACTCCGTTAG+AGG	0.391700	4_2:+69560634	None:intergenic
TAGATACATATTTCATACTT+TGG	0.395073	4_2:-69559698	Msa0618630:three_prime_UTR
GGAGAGAAAACGAAGGTTGC+CGG	0.399062	4_2:-69560386	Msa0618630:CDS
ATTCAGCTGCCTGATAAAAC+TGG	0.407135	4_2:+69560920	None:intergenic
AAAGGTTAAAGGGTTGTGTT+TGG	0.409541	4_2:+69561657	None:intergenic
CTCTCCATGGCTTCTGCCAG+TGG	0.418903	4_2:+69560403	None:intergenic
TCATAAGTCTTTGCCAGAAA+AGG	0.419332	4_2:+69561071	None:intergenic
AACAACGGCGCTAACGTTGT+TGG	0.424186	4_2:+69561572	None:intergenic
AAATCACCTTATATATATTC+TGG	0.426534	4_2:+69561243	None:intergenic
GCCTCAAGAGCAGCAGCAGC+TGG	0.427478	4_2:+69560055	None:intergenic
TCTGGCAAAGACTTATGAAA+TGG	0.438206	4_2:-69561066	Msa0618630:CDS
CAATCATGTGTAATAAAACT+TGG	0.442618	4_2:-69559743	Msa0618630:three_prime_UTR
TGAAATAGAGAAGCTGAAAC+AGG	0.448407	4_2:-69560599	Msa0618630:CDS
GATGCACTCCACGAAACAAT+AGG	0.454683	4_2:+69561023	None:intergenic
TGGGGTTAATGATGTATTCT+GGG	0.456218	4_2:-69559987	Msa0618630:CDS
GAGGGTGAGATTTGTCAATT+GGG	0.461697	4_2:-69561157	Msa0618630:five_prime_UTR
ACCAGCTGCTGCTGCTCTTG+AGG	0.466489	4_2:-69560056	Msa0618630:CDS
CAAAGATTGTGTCACTCCAT+TGG	0.472243	4_2:-69559659	Msa0618630:three_prime_UTR
GCCTTTCAGACTCCGTTAGA+GGG	0.473627	4_2:+69560635	None:intergenic
TTGGTTATACTTTGATTAGA+GGG	0.473777	4_2:-69561420	Msa0618630:five_prime_UTR
ATGTCAATTTCAGGTGACTT+AGG	0.477806	4_2:+69560088	None:intergenic
TGCAGAGAATGACTATGAAC+GGG	0.482637	4_2:+69560676	None:intergenic
TCCTGGTGCATCGGAAGCAC+AGG	0.486616	4_2:-69559945	Msa0618630:CDS
GAGACTCTTGCACATGAAGT+TGG	0.497289	4_2:-69560214	Msa0618630:CDS
CATATTTCATACTTTGGCTG+AGG	0.500964	4_2:-69559692	Msa0618630:three_prime_UTR
CGTTCACACTCATTCAAACA+TGG	0.502442	4_2:-69560182	Msa0618630:CDS
GAAGGAAAACCTAGTGATCA+TGG	0.502730	4_2:-69559881	Msa0618630:CDS
TTGGCAAATTCCCACTGCTC+CGG	0.502904	4_2:+69560754	None:intergenic
GGGATTTAGGAAAGTTGATC+CGG	0.507404	4_2:-69560773	Msa0618630:CDS
CTTGCCACTGGCAGAAGCCA+TGG	0.509175	4_2:-69560407	Msa0618630:CDS
TTTCGTTGTGTGGAATCCTC+CGG	0.511600	4_2:-69560991	Msa0618630:CDS
TCCTGTGCTTCCGATGCACC+AGG	0.511617	4_2:+69559944	None:intergenic
GAAGAGATACCAGCATGATT+GGG	0.512133	4_2:-69560551	Msa0618630:CDS
TGCTGTAAATCTCTTGCCAC+TGG	0.515181	4_2:-69560419	Msa0618630:CDS
GGAAAGTTGATCCGGAGCAG+TGG	0.515618	4_2:-69560765	Msa0618630:CDS
CAGTTCTTGACAGAGGATCC+TGG	0.516203	4_2:-69559962	Msa0618630:CDS
AGACTTCTGTAGCTTTGCCC+AGG	0.516910	4_2:-69560315	Msa0618630:CDS
AAACAATCATCCAGAACAGA+TGG	0.518388	4_2:-69559831	Msa0618630:CDS
ATACATATTACATCCTCCAT+TGG	0.519440	4_2:-69559594	Msa0618630:three_prime_UTR
CCTCGGATCCTATTGTTTCG+TGG	0.527360	4_2:-69561031	Msa0618630:CDS
TTATTGTGCTTAAAGAATCT+CGG	0.532647	4_2:+69560948	None:intergenic
CGAACAAAAGTTTCGTTGTG+TGG	0.533195	4_2:-69561001	Msa0618630:CDS
TGATTATTGATTGATTATCA+GGG	0.536537	4_2:-69561356	Msa0618630:five_prime_UTR
GCATTGTTCGAAAGATCAGT+TGG	0.538254	4_2:-69560509	Msa0618630:CDS
AACGTAAGTTGCAATTTCCA+AGG	0.545600	4_2:+69561482	None:intergenic
GTCAAAGTAGAGTTATCCTC+TGG	0.546841	4_2:+69560286	None:intergenic
AGCTAGTGTTGAAGATGCTA+TGG	0.547413	4_2:-69560338	Msa0618630:CDS
CTCAAGTTGATCCAATCTCT+CGG	0.553126	4_2:+69560255	None:intergenic
GACAGAGGATCCTGGTGCAT+CGG	0.553354	4_2:-69559954	Msa0618630:CDS
ATTAACCCCAGTTGCTGCAG+TGG	0.553513	4_2:+69560000	None:intergenic
CCCCTCTAACGGAGTCTGAA+AGG	0.554429	4_2:-69560636	Msa0618630:CDS
ATGCAGAGAATGACTATGAA+CGG	0.560960	4_2:+69560675	None:intergenic
AATACGTTGACCTTCTGCTC+AGG	0.562482	4_2:-69561760	Msa0618630:five_prime_UTR
GCTGCAGTGGTGATTCTCGC+AGG	0.569378	4_2:+69560013	None:intergenic
TAAGTCTTTGCCAGAAAAGG+AGG	0.570699	4_2:+69561074	None:intergenic
CAAAATCTACCATGATCACT+AGG	0.571873	4_2:+69559872	None:intergenic
AACAATCATCCAGAACAGAT+GGG	0.574845	4_2:-69559830	Msa0618630:CDS
GGAATCCTCCGGAATTCGCA+AGG	0.575730	4_2:-69560980	Msa0618630:CDS
TTAAAGCAACCACTTCTCGC+CGG	0.577237	4_2:+69560367	None:intergenic
GAAAGTTGATCCGGAGCAGT+GGG	0.578322	4_2:-69560764	Msa0618630:CDS
CATGCCTTTCCCAATCATGC+TGG	0.579073	4_2:+69560542	None:intergenic
GAATCACCACTGCAGCAACT+GGG	0.580374	4_2:-69560006	Msa0618630:CDS
CGAAGGTTGCCGGCGAGAAG+TGG	0.586677	4_2:-69560376	Msa0618630:CDS
AATATATATAAGGTGATTTG+GGG	0.597900	4_2:-69561239	Msa0618630:five_prime_UTR
CCTTTCAGACTCCGTTAGAG+GGG	0.598591	4_2:+69560636	None:intergenic
TGAATATTCTTCATCAGATG+CGG	0.602613	4_2:+69560709	None:intergenic
GACTTCTGTAGCTTTGCCCA+GGG	0.603526	4_2:-69560314	Msa0618630:CDS
GATACCAGCATGATTGGGAA+AGG	0.606022	4_2:-69560546	Msa0618630:CDS
AAAACCCTTGCGAATTCCGG+AGG	0.607238	4_2:+69560975	None:intergenic
TCAAGCACAAGCCCCTCTAA+CGG	0.613167	4_2:-69560647	Msa0618630:CDS
GGCAAAGACTTATGAAATGG+TGG	0.613237	4_2:-69561063	Msa0618630:CDS
GGATCAACTTGAGGCATCCG+TGG	0.615719	4_2:-69560245	Msa0618630:CDS
CGAGAGATTGGATCAACTTG+AGG	0.627773	4_2:-69560254	Msa0618630:CDS
AATGGTGGATGATCGATCCT+CGG	0.628991	4_2:-69561048	Msa0618630:CDS
GAATCCTCCGGAATTCGCAA+GGG	0.629052	4_2:-69560979	Msa0618630:CDS
TGATGAAGAATATTCATAGA+CGG	0.629516	4_2:-69560702	Msa0618630:CDS
ATATCTTGTCAGCAACTAGA+CGG	0.636770	4_2:-69560121	Msa0618630:CDS
ACAATCATCCAGAACAGATG+GGG	0.647372	4_2:-69559829	Msa0618630:CDS
CTGGGAACAGTTCTTGACAG+AGG	0.655854	4_2:-69559969	Msa0618630:CDS
AAGAGTCTCCCAAAATGCCA+CGG	0.657362	4_2:+69560228	None:intergenic
AATCACCACTGCAGCAACTG+GGG	0.658502	4_2:-69560005	Msa0618630:CDS
GGATAGAGAACAACTCCTCG+TGG	0.661247	4_2:-69560578	Msa0618630:CDS
CCACGAAACAATAGGATCCG+AGG	0.666703	4_2:+69561031	None:intergenic
ATTACATATGAAGAAAACAA+CGG	0.686562	4_2:+69561557	None:intergenic
GGTATCTCTTCGTCTCCACG+AGG	0.715796	4_2:+69560563	None:intergenic
TTTGCCCAGGGAAAATCCAG+AGG	0.715905	4_2:-69560302	Msa0618630:CDS
AAGCCATGGAGAGAAAACGA+AGG	0.761326	4_2:-69560393	Msa0618630:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTGTTTTATTTTGAAAAAT+TGG	-	chr4_2:69560160-69560179	Msa0618630:CDS	10.0%
!!!	TTGTTTTATTTTGAAAAATT+GGG	-	chr4_2:69560161-69560180	Msa0618630:CDS	10.0%
!!!	TTTGTTTTATTTTGAAAAAT+TGG	-	chr4_2:69560160-69560179	Msa0618630:CDS	10.0%
!!!	TTGTTTTATTTTGAAAAATT+GGG	-	chr4_2:69560161-69560180	Msa0618630:CDS	10.0%
!!!	TGTTTTATTTTGAAAAATTG+GGG	-	chr4_2:69560162-69560181	Msa0618630:CDS	15.0%
!!!	TTTATTTTATTTACTGATTC+TGG	-	chr4_2:69560539-69560558	Msa0618630:CDS	15.0%
!!!	TGTTTTATTTTGAAAAATTG+GGG	-	chr4_2:69560162-69560181	Msa0618630:CDS	15.0%
!!!	TTTATTTTATTTACTGATTC+TGG	-	chr4_2:69560539-69560558	Msa0618630:CDS	15.0%
!!!	AAATTGAATTTTGAAGTGAA+AGG	+	chr4_2:69559740-69559759	None:intergenic	20.0%
!!	ATTACATATGAAGAAAACAA+CGG	+	chr4_2:69559822-69559841	None:intergenic	20.0%
!!!	TTCTTTTTGATGATTTTTCT+TGG	-	chr4_2:69559937-69559956	Msa0618630:CDS	20.0%
!!!	TGATTATTGATTGATTATCA+GGG	-	chr4_2:69560020-69560039	Msa0618630:CDS	20.0%
!!!	ATTTTGTCTAGGTTATATTT+GGG	-	chr4_2:69560055-69560074	Msa0618630:CDS	20.0%
!!!	TTTGCTTTGTTTTTAATTTG+TGG	-	chr4_2:69560098-69560117	Msa0618630:CDS	20.0%
!!	TTTCTTCCAGAATATATATA+AGG	-	chr4_2:69560127-69560146	Msa0618630:CDS	20.0%
!!	AAATCACCTTATATATATTC+TGG	+	chr4_2:69560136-69560155	None:intergenic	20.0%
!!	AGAATATATATAAGGTGATT+TGG	-	chr4_2:69560135-69560154	Msa0618630:CDS	20.0%
!!	GAATATATATAAGGTGATTT+GGG	-	chr4_2:69560136-69560155	Msa0618630:CDS	20.0%
!!	AATATATATAAGGTGATTTG+GGG	-	chr4_2:69560137-69560156	Msa0618630:CDS	20.0%
!!	TAGATACATATTTCATACTT+TGG	-	chr4_2:69561678-69561697	Msa0618630:five_prime_UTR	20.0%
!!!	AAATTGAATTTTGAAGTGAA+AGG	+	chr4_2:69559740-69559759	None:intergenic	20.0%
!!	ATTACATATGAAGAAAACAA+CGG	+	chr4_2:69559822-69559841	None:intergenic	20.0%
!!!	TTCTTTTTGATGATTTTTCT+TGG	-	chr4_2:69559937-69559956	Msa0618630:CDS	20.0%
!!!	TGATTATTGATTGATTATCA+GGG	-	chr4_2:69560020-69560039	Msa0618630:CDS	20.0%
!!!	ATTTTGTCTAGGTTATATTT+GGG	-	chr4_2:69560055-69560074	Msa0618630:CDS	20.0%
!!!	TTTGCTTTGTTTTTAATTTG+TGG	-	chr4_2:69560098-69560117	Msa0618630:CDS	20.0%
!!	TTTCTTCCAGAATATATATA+AGG	-	chr4_2:69560127-69560146	Msa0618630:CDS	20.0%
!!	AAATCACCTTATATATATTC+TGG	+	chr4_2:69560136-69560155	None:intergenic	20.0%
!!	AGAATATATATAAGGTGATT+TGG	-	chr4_2:69560135-69560154	Msa0618630:CDS	20.0%
!!	GAATATATATAAGGTGATTT+GGG	-	chr4_2:69560136-69560155	Msa0618630:CDS	20.0%
!!	AATATATATAAGGTGATTTG+GGG	-	chr4_2:69560137-69560156	Msa0618630:CDS	20.0%
!!	TAGATACATATTTCATACTT+TGG	-	chr4_2:69561678-69561697	Msa0618630:five_prime_UTR	20.0%
!!!	TTTTGAAGTGAAAGGTTAAA+GGG	+	chr4_2:69559732-69559751	None:intergenic	25.0%
!!!	ATTTTGAAGTGAAAGGTTAA+AGG	+	chr4_2:69559733-69559752	None:intergenic	25.0%
!	AAAATCATCAAAAAGAAGCT+TGG	+	chr4_2:69559934-69559953	None:intergenic	25.0%
!	TTGGTTATACTTTGATTAGA+GGG	-	chr4_2:69559956-69559975	Msa0618630:CDS	25.0%
!!	CTGATTATTGATTGATTATC+AGG	-	chr4_2:69560019-69560038	Msa0618630:CDS	25.0%
!!!	TTGATTATCAGGGTTTTTTT+TGG	-	chr4_2:69560030-69560049	Msa0618630:CDS	25.0%
!!!	TGATTATCAGGGTTTTTTTT+GGG	-	chr4_2:69560031-69560050	Msa0618630:CDS	25.0%
!!	GATTTTGTCTAGGTTATATT+TGG	-	chr4_2:69560054-69560073	Msa0618630:CDS	25.0%
!!!	GTTTTGAATTTAGGTTTTGA+GGG	-	chr4_2:69560201-69560220	Msa0618630:CDS	25.0%
!	TTATTGTGCTTAAAGAATCT+CGG	+	chr4_2:69560431-69560450	None:intergenic	25.0%
!	TATGTAAGCAAATTTGATGT+CGG	-	chr4_2:69560482-69560501	Msa0618630:CDS	25.0%
!!!	TATTTACTGATTCTGGTTTT+TGG	-	chr4_2:69560546-69560565	Msa0618630:CDS	25.0%
!!	TTGCCAATGATGATTTTATA+AGG	-	chr4_2:69560638-69560657	Msa0618630:CDS	25.0%
!!	TGCCAATGATGATTTTATAA+GGG	-	chr4_2:69560639-69560658	Msa0618630:CDS	25.0%
!	TGATGAAGAATATTCATAGA+CGG	-	chr4_2:69560674-69560693	Msa0618630:CDS	25.0%
!	AATAGTAGCAGAAAAAATGA+AGG	-	chr4_2:69561477-69561496	Msa0618630:five_prime_UTR	25.0%
!!	TAGCTATTGATTATTTCTTC+TGG	-	chr4_2:69561597-69561616	Msa0618630:five_prime_UTR	25.0%
!!	TTTTATTACACATGATTGTG+GGG	+	chr4_2:69561631-69561650	None:intergenic	25.0%
!!!	GTTTTATTACACATGATTGT+GGG	+	chr4_2:69561632-69561651	None:intergenic	25.0%
!!!	AGTTTTATTACACATGATTG+TGG	+	chr4_2:69561633-69561652	None:intergenic	25.0%
!	CAATCATGTGTAATAAAACT+TGG	-	chr4_2:69561633-69561652	Msa0618630:five_prime_UTR	25.0%
!!!	TTTTGAAGTGAAAGGTTAAA+GGG	+	chr4_2:69559732-69559751	None:intergenic	25.0%
!!!	ATTTTGAAGTGAAAGGTTAA+AGG	+	chr4_2:69559733-69559752	None:intergenic	25.0%
!	AAAATCATCAAAAAGAAGCT+TGG	+	chr4_2:69559934-69559953	None:intergenic	25.0%
!	TTGGTTATACTTTGATTAGA+GGG	-	chr4_2:69559956-69559975	Msa0618630:CDS	25.0%
!!	CTGATTATTGATTGATTATC+AGG	-	chr4_2:69560019-69560038	Msa0618630:CDS	25.0%
!!!	TTGATTATCAGGGTTTTTTT+TGG	-	chr4_2:69560030-69560049	Msa0618630:CDS	25.0%
!!!	TGATTATCAGGGTTTTTTTT+GGG	-	chr4_2:69560031-69560050	Msa0618630:CDS	25.0%
!!	GATTTTGTCTAGGTTATATT+TGG	-	chr4_2:69560054-69560073	Msa0618630:CDS	25.0%
!!!	GTTTTGAATTTAGGTTTTGA+GGG	-	chr4_2:69560201-69560220	Msa0618630:CDS	25.0%
!	TTATTGTGCTTAAAGAATCT+CGG	+	chr4_2:69560431-69560450	None:intergenic	25.0%
!	TATGTAAGCAAATTTGATGT+CGG	-	chr4_2:69560482-69560501	Msa0618630:CDS	25.0%
!!!	TATTTACTGATTCTGGTTTT+TGG	-	chr4_2:69560546-69560565	Msa0618630:CDS	25.0%
!!	TTGCCAATGATGATTTTATA+AGG	-	chr4_2:69560638-69560657	Msa0618630:CDS	25.0%
!!	TGCCAATGATGATTTTATAA+GGG	-	chr4_2:69560639-69560658	Msa0618630:CDS	25.0%
!	TGATGAAGAATATTCATAGA+CGG	-	chr4_2:69560674-69560693	Msa0618630:CDS	25.0%
!	AATAGTAGCAGAAAAAATGA+AGG	-	chr4_2:69561477-69561496	Msa0618630:five_prime_UTR	25.0%
!!	TAGCTATTGATTATTTCTTC+TGG	-	chr4_2:69561597-69561616	Msa0618630:five_prime_UTR	25.0%
!!	TTTTATTACACATGATTGTG+GGG	+	chr4_2:69561631-69561650	None:intergenic	25.0%
!!!	GTTTTATTACACATGATTGT+GGG	+	chr4_2:69561632-69561651	None:intergenic	25.0%
!!!	AGTTTTATTACACATGATTG+TGG	+	chr4_2:69561633-69561652	None:intergenic	25.0%
!	CAATCATGTGTAATAAAACT+TGG	-	chr4_2:69561633-69561652	Msa0618630:five_prime_UTR	25.0%
!	TAATATTTTTCCTGAGCAGA+AGG	+	chr4_2:69559629-69559648	None:intergenic	30.0%
	TAACGTTGTTGGATCTTAAA+AGG	+	chr4_2:69559796-69559815	None:intergenic	30.0%
	CTTGGTTATACTTTGATTAG+AGG	-	chr4_2:69559955-69559974	Msa0618630:CDS	30.0%
	ATACTTTGATTAGAGGGTTA+TGG	-	chr4_2:69559962-69559981	Msa0618630:CDS	30.0%
	TCTTCTTTGTGATTAGGTTA+TGG	-	chr4_2:69559990-69560009	Msa0618630:CDS	30.0%
!!!	GATTATCAGGGTTTTTTTTG+GGG	-	chr4_2:69560032-69560051	Msa0618630:CDS	30.0%
!!!	TTTTTTTGGGGATTTTGTCT+AGG	-	chr4_2:69560044-69560063	Msa0618630:CDS	30.0%
	TGAAAAATTGGGGATTGATT+AGG	-	chr4_2:69560172-69560191	Msa0618630:CDS	30.0%
!!!	GGTTTTGAATTTAGGTTTTG+AGG	-	chr4_2:69560200-69560219	Msa0618630:CDS	30.0%
	TTGTCAATTGGGAATTGATT+AGG	-	chr4_2:69560230-69560249	Msa0618630:CDS	30.0%
!	ATTGGGAATTGATTAGGTTT+TGG	-	chr4_2:69560236-69560255	Msa0618630:CDS	30.0%
!	TTGGGAATTGATTAGGTTTT+GGG	-	chr4_2:69560237-69560256	Msa0618630:CDS	30.0%
!!!	TTTTGGGTTTTTTTGAGTGA+TGG	-	chr4_2:69560253-69560272	Msa0618630:CDS	30.0%
!!	ATAACTTCTCCAGTTTTATC+AGG	-	chr4_2:69560447-69560466	Msa0618630:CDS	30.0%
	TTCATAGTATATGTATGTGC+AGG	-	chr4_2:69560582-69560601	Msa0618630:CDS	30.0%
	TCATAGTATATGTATGTGCA+GGG	-	chr4_2:69560583-69560602	Msa0618630:CDS	30.0%
!	GCCAATGATGATTTTATAAG+GGG	-	chr4_2:69560640-69560659	Msa0618630:CDS	30.0%
!	CCAATGATGATTTTATAAGG+GGG	-	chr4_2:69560641-69560660	Msa0618630:CDS	30.0%
	TGAATATTCTTCATCAGATG+CGG	+	chr4_2:69560670-69560689	None:intergenic	30.0%
	GAAAGATCAGTTGGAAAAAT+TGG	-	chr4_2:69560876-69560895	Msa0618630:intron	30.0%
	AAGAGATTTACAGCAATCAT+AGG	+	chr4_2:69560952-69560971	None:intergenic	30.0%
	ATACATATTACATCCTCCAT+TGG	-	chr4_2:69561782-69561801	Msa0618630:five_prime_UTR	30.0%
!	TAATATTTTTCCTGAGCAGA+AGG	+	chr4_2:69559629-69559648	None:intergenic	30.0%
	TAACGTTGTTGGATCTTAAA+AGG	+	chr4_2:69559796-69559815	None:intergenic	30.0%
	CTTGGTTATACTTTGATTAG+AGG	-	chr4_2:69559955-69559974	Msa0618630:CDS	30.0%
	ATACTTTGATTAGAGGGTTA+TGG	-	chr4_2:69559962-69559981	Msa0618630:CDS	30.0%
	TCTTCTTTGTGATTAGGTTA+TGG	-	chr4_2:69559990-69560009	Msa0618630:CDS	30.0%
!!!	GATTATCAGGGTTTTTTTTG+GGG	-	chr4_2:69560032-69560051	Msa0618630:CDS	30.0%
!!!	TTTTTTTGGGGATTTTGTCT+AGG	-	chr4_2:69560044-69560063	Msa0618630:CDS	30.0%
	TGAAAAATTGGGGATTGATT+AGG	-	chr4_2:69560172-69560191	Msa0618630:CDS	30.0%
!!!	GGTTTTGAATTTAGGTTTTG+AGG	-	chr4_2:69560200-69560219	Msa0618630:CDS	30.0%
	TTGTCAATTGGGAATTGATT+AGG	-	chr4_2:69560230-69560249	Msa0618630:CDS	30.0%
!	ATTGGGAATTGATTAGGTTT+TGG	-	chr4_2:69560236-69560255	Msa0618630:CDS	30.0%
!	TTGGGAATTGATTAGGTTTT+GGG	-	chr4_2:69560237-69560256	Msa0618630:CDS	30.0%
!!!	TTTTGGGTTTTTTTGAGTGA+TGG	-	chr4_2:69560253-69560272	Msa0618630:CDS	30.0%
!!	ATAACTTCTCCAGTTTTATC+AGG	-	chr4_2:69560447-69560466	Msa0618630:CDS	30.0%
	TTCATAGTATATGTATGTGC+AGG	-	chr4_2:69560582-69560601	Msa0618630:CDS	30.0%
	TCATAGTATATGTATGTGCA+GGG	-	chr4_2:69560583-69560602	Msa0618630:CDS	30.0%
!	GCCAATGATGATTTTATAAG+GGG	-	chr4_2:69560640-69560659	Msa0618630:CDS	30.0%
!	CCAATGATGATTTTATAAGG+GGG	-	chr4_2:69560641-69560660	Msa0618630:CDS	30.0%
	TGAATATTCTTCATCAGATG+CGG	+	chr4_2:69560670-69560689	None:intergenic	30.0%
	GAAAGATCAGTTGGAAAAAT+TGG	-	chr4_2:69560876-69560895	Msa0618630:intron	30.0%
	AAGAGATTTACAGCAATCAT+AGG	+	chr4_2:69560952-69560971	None:intergenic	30.0%
	ATACATATTACATCCTCCAT+TGG	-	chr4_2:69561782-69561801	Msa0618630:five_prime_UTR	30.0%
	TTATGCAGAAGAGAAAAAGC+TGG	-	chr4_2:69559646-69559665	Msa0618630:three_prime_UTR	35.0%
	AAAGGTTAAAGGGTTGTGTT+TGG	+	chr4_2:69559722-69559741	None:intergenic	35.0%
!	CTTTTTGTCCAAGTTTTCCT+TGG	-	chr4_2:69559877-69559896	Msa0618630:CDS	35.0%
	TGCAATTTCCAAGGAAAACT+TGG	+	chr4_2:69559888-69559907	None:intergenic	35.0%
	AACGTAAGTTGCAATTTCCA+AGG	+	chr4_2:69559897-69559916	None:intergenic	35.0%
	GACTGTTCTTCTTTGTGATT+AGG	-	chr4_2:69559984-69560003	Msa0618630:CDS	35.0%
!!!	AGGTTCTGGGTTTTGAATTT+AGG	-	chr4_2:69560192-69560211	Msa0618630:CDS	35.0%
	TCATAAGTCTTTGCCAGAAA+AGG	+	chr4_2:69560308-69560327	None:intergenic	35.0%
	TCTGGCAAAGACTTATGAAA+TGG	-	chr4_2:69560310-69560329	Msa0618630:CDS	35.0%
	ATATGTATGTGCAGGGATTT+AGG	-	chr4_2:69560590-69560609	Msa0618630:CDS	35.0%
	CCCCCTTATAAAATCATCAT+TGG	+	chr4_2:69560644-69560663	None:intergenic	35.0%
	ATGCAGAGAATGACTATGAA+CGG	+	chr4_2:69560704-69560723	None:intergenic	35.0%
	TGAAATAGAGAAGCTGAAAC+AGG	-	chr4_2:69560777-69560796	Msa0618630:intron	35.0%
	CACTCATTCAAACATGGATT+TGG	-	chr4_2:69561200-69561219	Msa0618630:five_prime_UTR	35.0%
	ATATCTTGTCAGCAACTAGA+CGG	-	chr4_2:69561255-69561274	Msa0618630:five_prime_UTR	35.0%
!	ATGTCAATTTCAGGTGACTT+AGG	+	chr4_2:69561291-69561310	None:intergenic	35.0%
	TCAACGTTCATGTCAATTTC+AGG	+	chr4_2:69561300-69561319	None:intergenic	35.0%
	TGGGGTTAATGATGTATTCT+GGG	-	chr4_2:69561389-69561408	Msa0618630:five_prime_UTR	35.0%
	CAAAATCTACCATGATCACT+AGG	+	chr4_2:69561507-69561526	None:intergenic	35.0%
!	CTAGTGATCATGGTAGATTT+TGG	-	chr4_2:69561505-69561524	Msa0618630:five_prime_UTR	35.0%
	AAACAATCATCCAGAACAGA+TGG	-	chr4_2:69561545-69561564	Msa0618630:five_prime_UTR	35.0%
	AACAATCATCCAGAACAGAT+GGG	-	chr4_2:69561546-69561565	Msa0618630:five_prime_UTR	35.0%
	CATATTTCATACTTTGGCTG+AGG	-	chr4_2:69561684-69561703	Msa0618630:five_prime_UTR	35.0%
	CTATTGCAGACAAAAACCAA+TGG	+	chr4_2:69561736-69561755	None:intergenic	35.0%
	TTATGCAGAAGAGAAAAAGC+TGG	-	chr4_2:69559646-69559665	Msa0618630:three_prime_UTR	35.0%
	AAAGGTTAAAGGGTTGTGTT+TGG	+	chr4_2:69559722-69559741	None:intergenic	35.0%
!	CTTTTTGTCCAAGTTTTCCT+TGG	-	chr4_2:69559877-69559896	Msa0618630:CDS	35.0%
	TGCAATTTCCAAGGAAAACT+TGG	+	chr4_2:69559888-69559907	None:intergenic	35.0%
	AACGTAAGTTGCAATTTCCA+AGG	+	chr4_2:69559897-69559916	None:intergenic	35.0%
	GACTGTTCTTCTTTGTGATT+AGG	-	chr4_2:69559984-69560003	Msa0618630:CDS	35.0%
!!!	AGGTTCTGGGTTTTGAATTT+AGG	-	chr4_2:69560192-69560211	Msa0618630:CDS	35.0%
	TCATAAGTCTTTGCCAGAAA+AGG	+	chr4_2:69560308-69560327	None:intergenic	35.0%
	TCTGGCAAAGACTTATGAAA+TGG	-	chr4_2:69560310-69560329	Msa0618630:CDS	35.0%
	ATATGTATGTGCAGGGATTT+AGG	-	chr4_2:69560590-69560609	Msa0618630:CDS	35.0%
	CCCCCTTATAAAATCATCAT+TGG	+	chr4_2:69560644-69560663	None:intergenic	35.0%
	ATGCAGAGAATGACTATGAA+CGG	+	chr4_2:69560704-69560723	None:intergenic	35.0%
	TGAAATAGAGAAGCTGAAAC+AGG	-	chr4_2:69560777-69560796	Msa0618630:intron	35.0%
	CACTCATTCAAACATGGATT+TGG	-	chr4_2:69561200-69561219	Msa0618630:five_prime_UTR	35.0%
	ATATCTTGTCAGCAACTAGA+CGG	-	chr4_2:69561255-69561274	Msa0618630:five_prime_UTR	35.0%
!	ATGTCAATTTCAGGTGACTT+AGG	+	chr4_2:69561291-69561310	None:intergenic	35.0%
	TCAACGTTCATGTCAATTTC+AGG	+	chr4_2:69561300-69561319	None:intergenic	35.0%
	TGGGGTTAATGATGTATTCT+GGG	-	chr4_2:69561389-69561408	Msa0618630:five_prime_UTR	35.0%
	CAAAATCTACCATGATCACT+AGG	+	chr4_2:69561507-69561526	None:intergenic	35.0%
!	CTAGTGATCATGGTAGATTT+TGG	-	chr4_2:69561505-69561524	Msa0618630:five_prime_UTR	35.0%
	AAACAATCATCCAGAACAGA+TGG	-	chr4_2:69561545-69561564	Msa0618630:five_prime_UTR	35.0%
	AACAATCATCCAGAACAGAT+GGG	-	chr4_2:69561546-69561565	Msa0618630:five_prime_UTR	35.0%
	CATATTTCATACTTTGGCTG+AGG	-	chr4_2:69561684-69561703	Msa0618630:five_prime_UTR	35.0%
	CTATTGCAGACAAAAACCAA+TGG	+	chr4_2:69561736-69561755	None:intergenic	35.0%
	ATTGGGGATTGATTAGGTTC+TGG	-	chr4_2:69560178-69560197	Msa0618630:CDS	40.0%
	TTGGGGATTGATTAGGTTCT+GGG	-	chr4_2:69560179-69560198	Msa0618630:CDS	40.0%
	TGAGGGTGAGATTTGTCAAT+TGG	-	chr4_2:69560218-69560237	Msa0618630:CDS	40.0%
	GAGGGTGAGATTTGTCAATT+GGG	-	chr4_2:69560219-69560238	Msa0618630:CDS	40.0%
!!!	TTTTGAGTGATGGATGAAGC+TGG	-	chr4_2:69560263-69560282	Msa0618630:CDS	40.0%
	TAAGTCTTTGCCAGAAAAGG+AGG	+	chr4_2:69560305-69560324	None:intergenic	40.0%
	GGCAAAGACTTATGAAATGG+TGG	-	chr4_2:69560313-69560332	Msa0618630:CDS	40.0%
	CGAACAAAAGTTTCGTTGTG+TGG	-	chr4_2:69560375-69560394	Msa0618630:CDS	40.0%
	ATTCAGCTGCCTGATAAAAC+TGG	+	chr4_2:69560459-69560478	None:intergenic	40.0%
!	GGGATTTAGGAAAGTTGATC+CGG	-	chr4_2:69560603-69560622	Msa0618630:CDS	40.0%
	TGCAGAGAATGACTATGAAC+GGG	+	chr4_2:69560703-69560722	None:intergenic	40.0%
	GAAGAGATACCAGCATGATT+GGG	-	chr4_2:69560825-69560844	Msa0618630:intron	40.0%
	GCATTGTTCGAAAGATCAGT+TGG	-	chr4_2:69560867-69560886	Msa0618630:intron	40.0%
!	AGCTAGTGTTGAAGATGCTA+TGG	-	chr4_2:69561038-69561057	Msa0618630:CDS	40.0%
!	TTATCCTCTGGATTTTCCCT+GGG	+	chr4_2:69561081-69561100	None:intergenic	40.0%
	GTCAAAGTAGAGTTATCCTC+TGG	+	chr4_2:69561093-69561112	None:intergenic	40.0%
!!	CTCAAGTTGATCCAATCTCT+CGG	+	chr4_2:69561124-69561143	None:intergenic	40.0%
	CGTTCACACTCATTCAAACA+TGG	-	chr4_2:69561194-69561213	Msa0618630:five_prime_UTR	40.0%
	CTGGGGTTAATGATGTATTC+TGG	-	chr4_2:69561388-69561407	Msa0618630:five_prime_UTR	40.0%
	GAAGGAAAACCTAGTGATCA+TGG	-	chr4_2:69561495-69561514	Msa0618630:five_prime_UTR	40.0%
!	GTGATCATGGTAGATTTTGG+TGG	-	chr4_2:69561508-69561527	Msa0618630:five_prime_UTR	40.0%
!!	GTAGATTTTGGTGGAACATG+CGG	-	chr4_2:69561517-69561536	Msa0618630:five_prime_UTR	40.0%
	ACAATCATCCAGAACAGATG+GGG	-	chr4_2:69561547-69561566	Msa0618630:five_prime_UTR	40.0%
!	CAAAGATTGTGTCACTCCAT+TGG	-	chr4_2:69561717-69561736	Msa0618630:five_prime_UTR	40.0%
	ATTGGGGATTGATTAGGTTC+TGG	-	chr4_2:69560178-69560197	Msa0618630:CDS	40.0%
	TTGGGGATTGATTAGGTTCT+GGG	-	chr4_2:69560179-69560198	Msa0618630:CDS	40.0%
	TGAGGGTGAGATTTGTCAAT+TGG	-	chr4_2:69560218-69560237	Msa0618630:CDS	40.0%
	GAGGGTGAGATTTGTCAATT+GGG	-	chr4_2:69560219-69560238	Msa0618630:CDS	40.0%
!!!	TTTTGAGTGATGGATGAAGC+TGG	-	chr4_2:69560263-69560282	Msa0618630:CDS	40.0%
	TAAGTCTTTGCCAGAAAAGG+AGG	+	chr4_2:69560305-69560324	None:intergenic	40.0%
	GGCAAAGACTTATGAAATGG+TGG	-	chr4_2:69560313-69560332	Msa0618630:CDS	40.0%
	CGAACAAAAGTTTCGTTGTG+TGG	-	chr4_2:69560375-69560394	Msa0618630:CDS	40.0%
	ATTCAGCTGCCTGATAAAAC+TGG	+	chr4_2:69560459-69560478	None:intergenic	40.0%
!	GGGATTTAGGAAAGTTGATC+CGG	-	chr4_2:69560603-69560622	Msa0618630:CDS	40.0%
	TGCAGAGAATGACTATGAAC+GGG	+	chr4_2:69560703-69560722	None:intergenic	40.0%
	GAAGAGATACCAGCATGATT+GGG	-	chr4_2:69560825-69560844	Msa0618630:intron	40.0%
	GCATTGTTCGAAAGATCAGT+TGG	-	chr4_2:69560867-69560886	Msa0618630:intron	40.0%
!	AGCTAGTGTTGAAGATGCTA+TGG	-	chr4_2:69561038-69561057	Msa0618630:CDS	40.0%
!	TTATCCTCTGGATTTTCCCT+GGG	+	chr4_2:69561081-69561100	None:intergenic	40.0%
	GTCAAAGTAGAGTTATCCTC+TGG	+	chr4_2:69561093-69561112	None:intergenic	40.0%
!!	CTCAAGTTGATCCAATCTCT+CGG	+	chr4_2:69561124-69561143	None:intergenic	40.0%
	CGTTCACACTCATTCAAACA+TGG	-	chr4_2:69561194-69561213	Msa0618630:five_prime_UTR	40.0%
	CTGGGGTTAATGATGTATTC+TGG	-	chr4_2:69561388-69561407	Msa0618630:five_prime_UTR	40.0%
	GAAGGAAAACCTAGTGATCA+TGG	-	chr4_2:69561495-69561514	Msa0618630:five_prime_UTR	40.0%
!	GTGATCATGGTAGATTTTGG+TGG	-	chr4_2:69561508-69561527	Msa0618630:five_prime_UTR	40.0%
!!	GTAGATTTTGGTGGAACATG+CGG	-	chr4_2:69561517-69561536	Msa0618630:five_prime_UTR	40.0%
	ACAATCATCCAGAACAGATG+GGG	-	chr4_2:69561547-69561566	Msa0618630:five_prime_UTR	40.0%
!	CAAAGATTGTGTCACTCCAT+TGG	-	chr4_2:69561717-69561736	Msa0618630:five_prime_UTR	40.0%
	AATACGTTGACCTTCTGCTC+AGG	-	chr4_2:69559616-69559635	Msa0618630:three_prime_UTR	45.0%
!	AAGTTCTCTGCCTCCTTTTC+TGG	-	chr4_2:69560292-69560311	Msa0618630:CDS	45.0%
!!	AATGGTGGATGATCGATCCT+CGG	-	chr4_2:69560328-69560347	Msa0618630:CDS	45.0%
	GATGCACTCCACGAAACAAT+AGG	+	chr4_2:69560356-69560375	None:intergenic	45.0%
	TTTCGTTGTGTGGAATCCTC+CGG	-	chr4_2:69560385-69560404	Msa0618630:CDS	45.0%
	AGCAAAACCCTTGCGAATTC+CGG	+	chr4_2:69560407-69560426	None:intergenic	45.0%
	CGAAGAGATACCAGCATGAT+TGG	-	chr4_2:69560824-69560843	Msa0618630:intron	45.0%
	GATACCAGCATGATTGGGAA+AGG	-	chr4_2:69560830-69560849	Msa0618630:intron	45.0%
	TGCTGTAAATCTCTTGCCAC+TGG	-	chr4_2:69560957-69560976	Msa0618630:CDS	45.0%
	AAGCCATGGAGAGAAAACGA+AGG	-	chr4_2:69560983-69561002	Msa0618630:CDS	45.0%
!	CAACCTTCGTTTTCTCTCCA+TGG	+	chr4_2:69560989-69561008	None:intergenic	45.0%
	TTAAAGCAACCACTTCTCGC+CGG	+	chr4_2:69561012-69561031	None:intergenic	45.0%
!	GTTATCCTCTGGATTTTCCC+TGG	+	chr4_2:69561082-69561101	None:intergenic	45.0%
	GACGTTAAACACCGAGAGAT+TGG	-	chr4_2:69561110-69561129	Msa0618630:exon	45.0%
	CGAGAGATTGGATCAACTTG+AGG	-	chr4_2:69561122-69561141	Msa0618630:exon	45.0%
	AAGAGTCTCCCAAAATGCCA+CGG	+	chr4_2:69561151-69561170	None:intergenic	45.0%
	GAGACTCTTGCACATGAAGT+TGG	-	chr4_2:69561162-69561181	Msa0618630:five_prime_UTR	45.0%
	AATACGTTGACCTTCTGCTC+AGG	-	chr4_2:69559616-69559635	Msa0618630:three_prime_UTR	45.0%
!	AAGTTCTCTGCCTCCTTTTC+TGG	-	chr4_2:69560292-69560311	Msa0618630:CDS	45.0%
!!	AATGGTGGATGATCGATCCT+CGG	-	chr4_2:69560328-69560347	Msa0618630:CDS	45.0%
	GATGCACTCCACGAAACAAT+AGG	+	chr4_2:69560356-69560375	None:intergenic	45.0%
	TTTCGTTGTGTGGAATCCTC+CGG	-	chr4_2:69560385-69560404	Msa0618630:CDS	45.0%
	AGCAAAACCCTTGCGAATTC+CGG	+	chr4_2:69560407-69560426	None:intergenic	45.0%
	CGAAGAGATACCAGCATGAT+TGG	-	chr4_2:69560824-69560843	Msa0618630:intron	45.0%
	GATACCAGCATGATTGGGAA+AGG	-	chr4_2:69560830-69560849	Msa0618630:intron	45.0%
	TGCTGTAAATCTCTTGCCAC+TGG	-	chr4_2:69560957-69560976	Msa0618630:CDS	45.0%
	AAGCCATGGAGAGAAAACGA+AGG	-	chr4_2:69560983-69561002	Msa0618630:CDS	45.0%
!	CAACCTTCGTTTTCTCTCCA+TGG	+	chr4_2:69560989-69561008	None:intergenic	45.0%
	TTAAAGCAACCACTTCTCGC+CGG	+	chr4_2:69561012-69561031	None:intergenic	45.0%
!	GTTATCCTCTGGATTTTCCC+TGG	+	chr4_2:69561082-69561101	None:intergenic	45.0%
	GACGTTAAACACCGAGAGAT+TGG	-	chr4_2:69561110-69561129	Msa0618630:exon	45.0%
	CGAGAGATTGGATCAACTTG+AGG	-	chr4_2:69561122-69561141	Msa0618630:exon	45.0%
	AAGAGTCTCCCAAAATGCCA+CGG	+	chr4_2:69561151-69561170	None:intergenic	45.0%
	GAGACTCTTGCACATGAAGT+TGG	-	chr4_2:69561162-69561181	Msa0618630:five_prime_UTR	45.0%
	AACAACGGCGCTAACGTTGT+TGG	+	chr4_2:69559807-69559826	None:intergenic	50.0%
	CCACGAAACAATAGGATCCG+AGG	+	chr4_2:69560348-69560367	None:intergenic	50.0%
	CCTCGGATCCTATTGTTTCG+TGG	-	chr4_2:69560345-69560364	Msa0618630:CDS	50.0%
	GAATCCTCCGGAATTCGCAA+GGG	-	chr4_2:69560397-69560416	Msa0618630:CDS	50.0%
	AAAACCCTTGCGAATTCCGG+AGG	+	chr4_2:69560404-69560423	None:intergenic	50.0%
!	GAAAGTTGATCCGGAGCAGT+GGG	-	chr4_2:69560612-69560631	Msa0618630:CDS	50.0%
	TTGGCAAATTCCCACTGCTC+CGG	+	chr4_2:69560625-69560644	None:intergenic	50.0%
	TCAAGCACAAGCCCCTCTAA+CGG	-	chr4_2:69560729-69560748	Msa0618630:CDS	50.0%
	CCTTTCAGACTCCGTTAGAG+GGG	+	chr4_2:69560743-69560762	None:intergenic	50.0%
	GCCTTTCAGACTCCGTTAGA+GGG	+	chr4_2:69560744-69560763	None:intergenic	50.0%
	TGCCTTTCAGACTCCGTTAG+AGG	+	chr4_2:69560745-69560764	None:intergenic	50.0%
	GGATAGAGAACAACTCCTCG+TGG	-	chr4_2:69560798-69560817	Msa0618630:intron	50.0%
	CATGCCTTTCCCAATCATGC+TGG	+	chr4_2:69560837-69560856	None:intergenic	50.0%
	GGAGAGAAAACGAAGGTTGC+CGG	-	chr4_2:69560990-69561009	Msa0618630:CDS	50.0%
!	AGACTTCTGTAGCTTTGCCC+AGG	-	chr4_2:69561061-69561080	Msa0618630:CDS	50.0%
!	GACTTCTGTAGCTTTGCCCA+GGG	-	chr4_2:69561062-69561081	Msa0618630:CDS	50.0%
	TTTGCCCAGGGAAAATCCAG+AGG	-	chr4_2:69561074-69561093	Msa0618630:CDS	50.0%
!!	TTGAGGCATCCGTGGCATTT+TGG	-	chr4_2:69561139-69561158	Msa0618630:five_prime_UTR	50.0%
!!	TGAGGCATCCGTGGCATTTT+GGG	-	chr4_2:69561140-69561159	Msa0618630:five_prime_UTR	50.0%
	AGAATCACCACTGCAGCAAC+TGG	-	chr4_2:69561369-69561388	Msa0618630:five_prime_UTR	50.0%
	GAATCACCACTGCAGCAACT+GGG	-	chr4_2:69561370-69561389	Msa0618630:five_prime_UTR	50.0%
	AATCACCACTGCAGCAACTG+GGG	-	chr4_2:69561371-69561390	Msa0618630:five_prime_UTR	50.0%
	ATTAACCCCAGTTGCTGCAG+TGG	+	chr4_2:69561379-69561398	None:intergenic	50.0%
	CTGGGAACAGTTCTTGACAG+AGG	-	chr4_2:69561407-69561426	Msa0618630:five_prime_UTR	50.0%
	CAGTTCTTGACAGAGGATCC+TGG	-	chr4_2:69561414-69561433	Msa0618630:five_prime_UTR	50.0%
	CTAACATGCCCCATCTGTTC+TGG	+	chr4_2:69561558-69561577	None:intergenic	50.0%
	AACAACGGCGCTAACGTTGT+TGG	+	chr4_2:69559807-69559826	None:intergenic	50.0%
	CCACGAAACAATAGGATCCG+AGG	+	chr4_2:69560348-69560367	None:intergenic	50.0%
	CCTCGGATCCTATTGTTTCG+TGG	-	chr4_2:69560345-69560364	Msa0618630:CDS	50.0%
	GAATCCTCCGGAATTCGCAA+GGG	-	chr4_2:69560397-69560416	Msa0618630:CDS	50.0%
	AAAACCCTTGCGAATTCCGG+AGG	+	chr4_2:69560404-69560423	None:intergenic	50.0%
!	GAAAGTTGATCCGGAGCAGT+GGG	-	chr4_2:69560612-69560631	Msa0618630:CDS	50.0%
	TTGGCAAATTCCCACTGCTC+CGG	+	chr4_2:69560625-69560644	None:intergenic	50.0%
	TCAAGCACAAGCCCCTCTAA+CGG	-	chr4_2:69560729-69560748	Msa0618630:CDS	50.0%
	CCTTTCAGACTCCGTTAGAG+GGG	+	chr4_2:69560743-69560762	None:intergenic	50.0%
	GCCTTTCAGACTCCGTTAGA+GGG	+	chr4_2:69560744-69560763	None:intergenic	50.0%
	TGCCTTTCAGACTCCGTTAG+AGG	+	chr4_2:69560745-69560764	None:intergenic	50.0%
	GGATAGAGAACAACTCCTCG+TGG	-	chr4_2:69560798-69560817	Msa0618630:intron	50.0%
	CATGCCTTTCCCAATCATGC+TGG	+	chr4_2:69560837-69560856	None:intergenic	50.0%
	GGAGAGAAAACGAAGGTTGC+CGG	-	chr4_2:69560990-69561009	Msa0618630:CDS	50.0%
!	AGACTTCTGTAGCTTTGCCC+AGG	-	chr4_2:69561061-69561080	Msa0618630:CDS	50.0%
!	GACTTCTGTAGCTTTGCCCA+GGG	-	chr4_2:69561062-69561081	Msa0618630:CDS	50.0%
	TTTGCCCAGGGAAAATCCAG+AGG	-	chr4_2:69561074-69561093	Msa0618630:CDS	50.0%
!!	TTGAGGCATCCGTGGCATTT+TGG	-	chr4_2:69561139-69561158	Msa0618630:five_prime_UTR	50.0%
!!	TGAGGCATCCGTGGCATTTT+GGG	-	chr4_2:69561140-69561159	Msa0618630:five_prime_UTR	50.0%
	AGAATCACCACTGCAGCAAC+TGG	-	chr4_2:69561369-69561388	Msa0618630:five_prime_UTR	50.0%
	GAATCACCACTGCAGCAACT+GGG	-	chr4_2:69561370-69561389	Msa0618630:five_prime_UTR	50.0%
	AATCACCACTGCAGCAACTG+GGG	-	chr4_2:69561371-69561390	Msa0618630:five_prime_UTR	50.0%
	ATTAACCCCAGTTGCTGCAG+TGG	+	chr4_2:69561379-69561398	None:intergenic	50.0%
	CTGGGAACAGTTCTTGACAG+AGG	-	chr4_2:69561407-69561426	Msa0618630:five_prime_UTR	50.0%
	CAGTTCTTGACAGAGGATCC+TGG	-	chr4_2:69561414-69561433	Msa0618630:five_prime_UTR	50.0%
	CTAACATGCCCCATCTGTTC+TGG	+	chr4_2:69561558-69561577	None:intergenic	50.0%
	GGAATCCTCCGGAATTCGCA+AGG	-	chr4_2:69560396-69560415	Msa0618630:CDS	55.0%
!	GGAAAGTTGATCCGGAGCAG+TGG	-	chr4_2:69560611-69560630	Msa0618630:CDS	55.0%
	CCCCTCTAACGGAGTCTGAA+AGG	-	chr4_2:69560740-69560759	Msa0618630:CDS	55.0%
	GGTATCTCTTCGTCTCCACG+AGG	+	chr4_2:69560816-69560835	None:intergenic	55.0%
!	GGATCAACTTGAGGCATCCG+TGG	-	chr4_2:69561131-69561150	Msa0618630:five_prime_UTR	55.0%
	GACAGAGGATCCTGGTGCAT+CGG	-	chr4_2:69561422-69561441	Msa0618630:five_prime_UTR	55.0%
	GGAATCCTCCGGAATTCGCA+AGG	-	chr4_2:69560396-69560415	Msa0618630:CDS	55.0%
!	GGAAAGTTGATCCGGAGCAG+TGG	-	chr4_2:69560611-69560630	Msa0618630:CDS	55.0%
	CCCCTCTAACGGAGTCTGAA+AGG	-	chr4_2:69560740-69560759	Msa0618630:CDS	55.0%
	GGTATCTCTTCGTCTCCACG+AGG	+	chr4_2:69560816-69560835	None:intergenic	55.0%
!	GGATCAACTTGAGGCATCCG+TGG	-	chr4_2:69561131-69561150	Msa0618630:five_prime_UTR	55.0%
	GACAGAGGATCCTGGTGCAT+CGG	-	chr4_2:69561422-69561441	Msa0618630:five_prime_UTR	55.0%
	CTTGCCACTGGCAGAAGCCA+TGG	-	chr4_2:69560969-69560988	Msa0618630:CDS	60.0%
	CTCTCCATGGCTTCTGCCAG+TGG	+	chr4_2:69560976-69560995	None:intergenic	60.0%
	ACCAGCTGCTGCTGCTCTTG+AGG	-	chr4_2:69561320-69561339	Msa0618630:five_prime_UTR	60.0%
	GCTGCAGTGGTGATTCTCGC+AGG	+	chr4_2:69561366-69561385	None:intergenic	60.0%
!	TCCTGGTGCATCGGAAGCAC+AGG	-	chr4_2:69561431-69561450	Msa0618630:five_prime_UTR	60.0%
	TCCTGTGCTTCCGATGCACC+AGG	+	chr4_2:69561435-69561454	None:intergenic	60.0%
	CTTGCCACTGGCAGAAGCCA+TGG	-	chr4_2:69560969-69560988	Msa0618630:CDS	60.0%
	CTCTCCATGGCTTCTGCCAG+TGG	+	chr4_2:69560976-69560995	None:intergenic	60.0%
	ACCAGCTGCTGCTGCTCTTG+AGG	-	chr4_2:69561320-69561339	Msa0618630:five_prime_UTR	60.0%
	GCTGCAGTGGTGATTCTCGC+AGG	+	chr4_2:69561366-69561385	None:intergenic	60.0%
!	TCCTGGTGCATCGGAAGCAC+AGG	-	chr4_2:69561431-69561450	Msa0618630:five_prime_UTR	60.0%
	TCCTGTGCTTCCGATGCACC+AGG	+	chr4_2:69561435-69561454	None:intergenic	60.0%
	CGAAGGTTGCCGGCGAGAAG+TGG	-	chr4_2:69561000-69561019	Msa0618630:CDS	65.0%
	GCCTCAAGAGCAGCAGCAGC+TGG	+	chr4_2:69561324-69561343	None:intergenic	65.0%
	CGAAGGTTGCCGGCGAGAAG+TGG	-	chr4_2:69561000-69561019	Msa0618630:CDS	65.0%
	GCCTCAAGAGCAGCAGCAGC+TGG	+	chr4_2:69561324-69561343	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_2	gene	69559588	69561810	69559588	ID=Msa0618630;Name=Msa0618630
chr4_2	mRNA	69559588	69561810	69559588	ID=Msa0618630-mRNA-1;Parent=Msa0618630;Name=Msa0618630-mRNA-1;_AED=0.01;_eAED=0.01;_QI=684\|1\|1\|1\|1\|1\|2\|214\|401
chr4_2	exon	69559588	69560794	69559588	ID=Msa0618630-mRNA-1:exon:20118;Parent=Msa0618630-mRNA-1
chr4_2	exon	69560914	69561810	69560914	ID=Msa0618630-mRNA-1:exon:20117;Parent=Msa0618630-mRNA-1
chr4_2	five_prime_UTR	69561127	69561810	69561127	ID=Msa0618630-mRNA-1:five_prime_utr;Parent=Msa0618630-mRNA-1
chr4_2	CDS	69560914	69561126	69560914	ID=Msa0618630-mRNA-1:cds;Parent=Msa0618630-mRNA-1
chr4_2	CDS	69559802	69560794	69559802	ID=Msa0618630-mRNA-1:cds;Parent=Msa0618630-mRNA-1
chr4_2	three_prime_UTR	69559588	69559801	69559588	ID=Msa0618630-mRNA-1:three_prime_utr;Parent=Msa0618630-mRNA-1

Gene Sequence

>Msa0618630

ATGGATGAAGCTGGAAGTTCAAGTTCTCTGCCTCCTTTTCTGGCAAAGACTTATGAAATGGTGGATGATCGATCCTCGGATCCTATTGTTTCGTGGAGTGCATCGAACAAAAGTTTCGTTGTGTGGAATCCTCCGGAATTCGCAAGGGTTTTGCTTCCGAGATTCTTTAAGCACAATAACTTCTCCAGTTTTATCAGGCAGCTGAATACATATGGATTTAGGAAAGTTGATCCGGAGCAGTGGGAATTTGCCAATGATGATTTTATAAGGGGGCAACCGCATCTGATGAAGAATATTCATAGACGGAAGCCCGTTCATAGTCATTCTCTGCATAATCTTCAAGCACAAGCCCCTCTAACGGAGTCTGAAAGGCAGAGTATGATTGATGAAATAGAGAAGCTGAAACAGGATAGAGAACAACTCCTCGTGGAGACGAAGAGATACCAGCATGATTGGGAAAGGCATGAGATTCAAATGCATTGTTCGAAAGATCAGTTGGAAAAATTGGAACATAAACAACAAAAGATGTTGTCTTCTGTTTCTGAAGCATTGCAGAAACCTATGATTGCTGTAAATCTCTTGCCACTGGCAGAAGCCATGGAGAGAAAACGAAGGTTGCCGGCGAGAAGTGGTTGCTTTAATAATGAAGCTAGTGTTGAAGATGCTATGGAGACTTCTGTAGCTTTGCCCAGGGAAAATCCAGAGGATAACTCTACTTTGACGTTAAACACCGAGAGATTGGATCAACTTGAGGCATCCGTGGCATTTTGGGAGACTCTTGCACATGAAGTTGGCGACAATTTCGTTCACACTCATTCAAACATGGATTTGGATGAATCTACATGTTGTGCTGATAGTTTGTCGATATCTTGTCAGCAACTAGACGGTGAAGTTCGACCTAAGTCACCTGAAATTGACATGAACGTTGAACCAGCTGCTGCTGCTCTTGAGGCTGTTGCAGTAAAAGAACAACCTGCGAGAATCACCACTGCAGCAACTGGGGTTAATGATGTATTCTGGGAACAGTTCTTGACAGAGGATCCTGGTGCATCGGAAGCACAGGAAGTGCAATCAGAAAGAAAAGATAATAGTAGCAGAAAAAATGAAGGAAAACCTAGTGATCATGGTAGATTTTGGTGGAACATGCGGAAATCAAACAATCATCCAGAACAGATGGGGCATGTTAGTCAAGTAGAGAAAATTTAG

Protein sequence

>Msa0618630

MDEAGSSSSLPPFLAKTYEMVDDRSSDPIVSWSASNKSFVVWNPPEFARVLLPRFFKHNNFSSFIRQLNTYGFRKVDPEQWEFANDDFIRGQPHLMKNIHRRKPVHSHSLHNLQAQAPLTESERQSMIDEIEKLKQDREQLLVETKRYQHDWERHEIQMHCSKDQLEKLEHKQQKMLSSVSEALQKPMIAVNLLPLAEAMERKRRLPARSGCFNNEASVEDAMETSVALPRENPEDNSTLTLNTERLDQLEASVAFWETLAHEVGDNFVHTHSNMDLDESTCCADSLSISCQQLDGEVRPKSPEIDMNVEPAAAALEAVAVKEQPARITTAATGVNDVFWEQFLTEDPGASEAQEVQSERKDNSSRKNEGKPSDHGRFWWNMRKSNNHPEQMGHVSQVEKI*