Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704300 | XP_013446829.1 | 98.907 | 366 | 4 | 0 | 1 | 366 | 1 | 366 | 0.0 | 759 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704300 | sp|Q5HZ05|TPPJ_ARATH | 70.541 | 370 | 93 | 6 | 1 | 357 | 1 | 367 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704300 | A0A072TUP0 | 98.907 | 366 | 4 | 0 | 1 | 366 | 1 | 366 | 0.0 | 759 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0657570 | Msa0704300 | 0.854288 | 1.359738e-61 | -8.615850e-47 |
| Msa0704300 | Msa0704310 | 0.853432 | 2.399148e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704300 | MtrunA17_Chr8g0382441 | 98.907 | 366 | 4 | 0 | 1 | 366 | 1 | 366 | 0.0 | 759 |
| Msa0704300 | MtrunA17_Chr3g0115661 | 61.983 | 363 | 127 | 3 | 3 | 359 | 4 | 361 | 5.22e-161 | 455 |
| Msa0704300 | MtrunA17_Chr5g0425711 | 66.773 | 313 | 102 | 2 | 50 | 362 | 66 | 376 | 1.05e-151 | 432 |
| Msa0704300 | MtrunA17_Chr4g0056481 | 52.381 | 378 | 157 | 4 | 8 | 365 | 16 | 390 | 4.97e-138 | 398 |
| Msa0704300 | MtrunA17_Chr4g0018441 | 53.107 | 354 | 138 | 4 | 32 | 363 | 39 | 386 | 3.40e-130 | 378 |
| Msa0704300 | MtrunA17_Chr3g0079281 | 52.486 | 362 | 153 | 4 | 17 | 359 | 25 | 386 | 1.86e-129 | 376 |
| Msa0704300 | MtrunA17_Chr3g0126491 | 52.759 | 290 | 127 | 2 | 79 | 358 | 66 | 355 | 1.67e-108 | 322 |
| Msa0704300 | MtrunA17_Chr8g0347141 | 47.797 | 295 | 144 | 2 | 74 | 358 | 17 | 311 | 7.93e-102 | 303 |
| Msa0704300 | MtrunA17_Chr4g0018781 | 49.398 | 83 | 41 | 1 | 74 | 155 | 22 | 104 | 3.21e-18 | 79.3 |
| Msa0704300 | MtrunA17_Chr4g0018791 | 50.000 | 62 | 30 | 1 | 240 | 300 | 2 | 63 | 8.74e-15 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704300 | AT5G65140.1 | 70.541 | 370 | 93 | 6 | 1 | 357 | 1 | 367 | 0.0 | 531 |
| Msa0704300 | AT5G10100.3 | 69.041 | 365 | 105 | 4 | 4 | 361 | 5 | 368 | 0.0 | 524 |
| Msa0704300 | AT5G10100.1 | 69.041 | 365 | 105 | 4 | 4 | 361 | 16 | 379 | 0.0 | 524 |
| Msa0704300 | AT5G10100.2 | 68.678 | 348 | 101 | 4 | 4 | 344 | 5 | 351 | 6.47e-177 | 496 |
| Msa0704300 | AT4G39770.1 | 66.106 | 357 | 101 | 4 | 3 | 357 | 6 | 344 | 3.68e-173 | 486 |
| Msa0704300 | AT5G10100.4 | 64.384 | 365 | 102 | 5 | 4 | 361 | 16 | 359 | 2.50e-168 | 474 |
| Msa0704300 | AT2G22190.1 | 69.565 | 322 | 91 | 3 | 38 | 358 | 35 | 350 | 6.43e-166 | 468 |
| Msa0704300 | AT5G65140.3 | 69.939 | 326 | 82 | 6 | 1 | 313 | 1 | 323 | 1.60e-165 | 466 |
| Msa0704300 | AT4G39770.2 | 65.507 | 345 | 99 | 4 | 3 | 345 | 6 | 332 | 1.94e-164 | 463 |
| Msa0704300 | AT1G35910.1 | 64.456 | 377 | 112 | 7 | 1 | 363 | 1 | 369 | 9.83e-163 | 460 |
| Msa0704300 | AT2G22190.2 | 69.355 | 310 | 88 | 3 | 38 | 346 | 35 | 338 | 1.83e-158 | 449 |
| Msa0704300 | AT1G78090.1 | 61.662 | 373 | 126 | 6 | 1 | 359 | 1 | 370 | 8.86e-156 | 443 |
| Msa0704300 | AT1G78090.2 | 61.838 | 359 | 120 | 6 | 1 | 345 | 1 | 356 | 4.20e-149 | 425 |
| Msa0704300 | AT5G65140.2 | 68.317 | 303 | 80 | 6 | 1 | 290 | 1 | 300 | 2.59e-147 | 419 |
| Msa0704300 | AT1G22210.1 | 61.300 | 323 | 113 | 3 | 43 | 359 | 1 | 317 | 8.21e-138 | 395 |
| Msa0704300 | AT5G51460.2 | 54.252 | 341 | 133 | 6 | 35 | 358 | 48 | 382 | 4.18e-128 | 373 |
| Msa0704300 | AT5G51460.4 | 54.252 | 341 | 133 | 6 | 35 | 358 | 48 | 382 | 4.18e-128 | 373 |
| Msa0704300 | AT5G51460.1 | 54.094 | 342 | 133 | 7 | 35 | 358 | 48 | 383 | 2.66e-126 | 368 |
| Msa0704300 | AT5G51460.5 | 54.094 | 342 | 133 | 7 | 35 | 358 | 48 | 383 | 2.66e-126 | 368 |
| Msa0704300 | AT5G51460.3 | 54.094 | 342 | 133 | 7 | 35 | 358 | 48 | 383 | 2.66e-126 | 368 |
| Msa0704300 | AT4G22590.1 | 52.907 | 344 | 142 | 4 | 31 | 357 | 29 | 369 | 9.25e-123 | 359 |
| Msa0704300 | AT4G12430.1 | 56.211 | 322 | 128 | 3 | 53 | 362 | 45 | 365 | 4.76e-119 | 349 |
Find 121 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTACTCACTTTGTTGTATT+TGG | 0.157241 | 4_4:+76624504 | None:intergenic |
| AGATATGTTTGAACAAATTA+TGG | 0.199793 | 4_4:-76624970 | Msa0704300:CDS |
| AGATTCGTCCCGCAATTAAA+TGG | 0.230940 | 4_4:-76623743 | Msa0704300:CDS |
| GATTATGATTAAATATTATA+AGG | 0.237519 | 4_4:-76622627 | Msa0704300:three_prime_UTR |
| GCTACCATTCATTCCGGTTT+TGG | 0.246623 | 4_4:+76625375 | None:intergenic |
| TAGCTGAAGAATACAATTCT+TGG | 0.262718 | 4_4:-76625183 | Msa0704300:CDS |
| TTTCCTACTGCAATTGTTAC+TGG | 0.265079 | 4_4:-76624723 | Msa0704300:CDS |
| CAGAATCACTTCATCTGATA+TGG | 0.267739 | 4_4:+76622675 | None:intergenic |
| ATCAAAAGATATGTATTTAT+AGG | 0.275040 | 4_4:-76622598 | Msa0704300:three_prime_UTR |
| TGAAGAGGCAAAAGAGAGAT+AGG | 0.276519 | 4_4:+76625658 | None:intergenic |
| AGAGACATAGATCAAGGTTT+TGG | 0.278672 | 4_4:-76623135 | Msa0704300:CDS |
| CCCTTGTCCCATTTAATTGC+GGG | 0.298244 | 4_4:+76623735 | None:intergenic |
| AAAGAGAGATAGGGAATCTT+TGG | 0.316424 | 4_4:+76625668 | None:intergenic |
| AGTCATGGCATGGATATTAA+AGG | 0.325492 | 4_4:-76624541 | Msa0704300:CDS |
| GAAATTATGCTTACCTCATT+AGG | 0.325958 | 4_4:+76623057 | None:intergenic |
| GATGTATTTCCTGTTTATAT+TGG | 0.349971 | 4_4:-76623352 | Msa0704300:CDS |
| TTCTTCAAAATTCTCCTCCT+TGG | 0.362292 | 4_4:+76625295 | None:intergenic |
| TGAAGAAAATACTAGAAAAT+AGG | 0.362475 | 4_4:+76625572 | None:intergenic |
| GGAGAAGATTTGACATGAGT+TGG | 0.374230 | 4_4:+76625211 | None:intergenic |
| TATGGATTTCCTTCAGCGTT+TGG | 0.380303 | 4_4:-76622959 | Msa0704300:CDS |
| TTGAAGAATCTTGAAATCAA+TGG | 0.381109 | 4_4:-76625280 | Msa0704300:CDS |
| CTTTAGATGTGTTGATGAAA+AGG | 0.396311 | 4_4:-76624097 | Msa0704300:intron |
| TACACCCTAGAGCGTGATCT+TGG | 0.396817 | 4_4:+76622916 | None:intergenic |
| CCTTGTGTTAGACGAAGCTT+CGG | 0.397569 | 4_4:+76623939 | None:intergenic |
| TACACAGAGATGGGTTGAAT+TGG | 0.408365 | 4_4:-76623994 | Msa0704300:intron |
| AGTACCGCTACCATTCATTC+CGG | 0.416696 | 4_4:+76625369 | None:intergenic |
| TGCTTATTAAGTACTTAGTA+TGG | 0.421067 | 4_4:-76622560 | Msa0704300:three_prime_UTR |
| AATATTTAATCATAATCATA+AGG | 0.425530 | 4_4:+76622633 | None:intergenic |
| CTATCATCACCAATATAAAC+AGG | 0.428430 | 4_4:+76623343 | None:intergenic |
| TATGCAGCAGCTGTGTCCTT+TGG | 0.429413 | 4_4:+76623093 | None:intergenic |
| CTTGTGTTAGACGAAGCTTC+GGG | 0.443939 | 4_4:+76623940 | None:intergenic |
| CTGTGGGTTTGATTTATAGT+TGG | 0.448630 | 4_4:+76625752 | None:intergenic |
| GTGACTAACCTCATTTATCA+TGG | 0.449499 | 4_4:+76624301 | None:intergenic |
| ATACTAGAAAATAGGTTAAG+AGG | 0.451702 | 4_4:+76625580 | None:intergenic |
| CCGTGCTTTCATGTCTGAAT+CGG | 0.453757 | 4_4:-76624871 | Msa0704300:intron |
| AACCGATGAAGATGCATTCA+AGG | 0.456478 | 4_4:-76623320 | Msa0704300:intron |
| ACAGAAGCCACCGGCAGCAC+CGG | 0.461102 | 4_4:-76625335 | Msa0704300:CDS |
| TATCATGGGAACAAATTCTC+TGG | 0.470973 | 4_4:+76624316 | None:intergenic |
| TCAGACATGAAAGCACGGTC+GGG | 0.472310 | 4_4:+76624876 | None:intergenic |
| CTATATTATGCTGGAAGTCA+TGG | 0.475549 | 4_4:-76624556 | Msa0704300:CDS |
| ACAAATTATGGATGCTGCAA+AGG | 0.481613 | 4_4:-76624958 | Msa0704300:CDS |
| TCCTTCAGCGTTTGGTGGAG+TGG | 0.484492 | 4_4:-76622951 | Msa0704300:CDS |
| GCCCTTGTCCCATTTAATTG+CGG | 0.492631 | 4_4:+76623734 | None:intergenic |
| GATTCGTCCCGCAATTAAAT+GGG | 0.493006 | 4_4:-76623742 | Msa0704300:CDS |
| GTCATGGCATGGATATTAAA+GGG | 0.494286 | 4_4:-76624540 | Msa0704300:CDS |
| TTTCTTCATCACAAAACCTA+AGG | 0.494556 | 4_4:-76625557 | Msa0704300:intron |
| TTGGATGAACTATATTATGC+TGG | 0.495236 | 4_4:-76624565 | Msa0704300:CDS |
| TCAGATGAAGTGATTCTGAA+TGG | 0.496665 | 4_4:-76622670 | Msa0704300:three_prime_UTR |
| CGGTCGGGGTCATCCACAAT+TGG | 0.498926 | 4_4:+76624891 | None:intergenic |
| CATCTCCAAGATCACGCTCT+AGG | 0.500203 | 4_4:-76622921 | Msa0704300:CDS |
| TTGTATTCTTCAGCTAAAGA+AGG | 0.501331 | 4_4:+76625190 | None:intergenic |
| TAGAAAATAGGTTAAGAGGT+GGG | 0.502439 | 4_4:+76625584 | None:intergenic |
| AGCCAAGTAGTAATTAGTAC+GGG | 0.502654 | 4_4:-76622717 | Msa0704300:three_prime_UTR |
| GAACTTGTGGTTCTCAACTC+TGG | 0.503615 | 4_4:+76624134 | None:intergenic |
| AGAAAATAGGTTAAGAGGTG+GGG | 0.509951 | 4_4:+76625585 | None:intergenic |
| GAGACCAAAACCGGAATGAA+TGG | 0.513958 | 4_4:-76625379 | Msa0704300:CDS |
| ATTTGTTCCCATGATAAATG+AGG | 0.514951 | 4_4:-76624309 | Msa0704300:intron |
| CAGAAGCCACCGGCAGCACC+GGG | 0.515096 | 4_4:-76625334 | Msa0704300:CDS |
| ATGTATCCACCCGGTGCTGC+CGG | 0.516770 | 4_4:+76625325 | None:intergenic |
| ATCTCCAAGATCACGCTCTA+GGG | 0.517903 | 4_4:-76622920 | Msa0704300:CDS |
| TGGTTCTCAACTCTGGCACC+AGG | 0.519019 | 4_4:+76624141 | None:intergenic |
| GAAGAGGCAAAAGAGAGATA+GGG | 0.522287 | 4_4:+76625659 | None:intergenic |
| GAGAGAGAGAGTGGAAGTGG+GGG | 0.523845 | 4_4:+76625716 | None:intergenic |
| CAAATTATGGATGCTGCAAA+GGG | 0.526052 | 4_4:-76624957 | Msa0704300:CDS |
| TGCCGGTGGCTTCTGTGCCA+CGG | 0.527210 | 4_4:+76625342 | None:intergenic |
| AAATTAAGAGACATAGATCA+AGG | 0.529862 | 4_4:-76623141 | Msa0704300:CDS |
| CAGATGAAGTGATTCTGAAT+GGG | 0.530345 | 4_4:-76622669 | Msa0704300:three_prime_UTR |
| TAGCCAAGTAGTAATTAGTA+CGG | 0.530397 | 4_4:-76622718 | Msa0704300:three_prime_UTR |
| TCGACAGCTTCGCCATCCAT+CGG | 0.532132 | 4_4:-76624997 | Msa0704300:intron |
| AATTAAATGGGACAAGGGCA+AGG | 0.533517 | 4_4:-76623730 | Msa0704300:CDS |
| ATGGGAACAAATTCTCTGGC+AGG | 0.537434 | 4_4:+76624320 | None:intergenic |
| TACCTTGAATGCATCTTCAT+CGG | 0.539742 | 4_4:+76623318 | None:intergenic |
| GGATTTCCTTCAGCGTTTGG+TGG | 0.542635 | 4_4:-76622956 | Msa0704300:CDS |
| TTCAGACATGAAAGCACGGT+CGG | 0.542972 | 4_4:+76624875 | None:intergenic |
| AGGAAATACATCGTTACAGT+TGG | 0.546340 | 4_4:+76623363 | None:intergenic |
| TCCACTCCACCAAACGCTGA+AGG | 0.548294 | 4_4:+76622950 | None:intergenic |
| GGAATGCAAAAGAGGAAGAA+GGG | 0.548624 | 4_4:+76625631 | None:intergenic |
| TGGAATGCAAAAGAGGAAGA+AGG | 0.550220 | 4_4:+76625630 | None:intergenic |
| GGGGAAGAAGACATAGGCTG+TGG | 0.552713 | 4_4:+76625735 | None:intergenic |
| ATTGCAATGGAATGCAAAAG+AGG | 0.553225 | 4_4:+76625623 | None:intergenic |
| TGGTACTTTGTCACCAATTG+TGG | 0.553666 | 4_4:-76624904 | Msa0704300:CDS |
| GAGAAAACAAAATCAACTCC+TGG | 0.555984 | 4_4:-76624159 | Msa0704300:CDS |
| TATCCACCCGGTGCTGCCGG+TGG | 0.562450 | 4_4:+76625328 | None:intergenic |
| GTGGATACATTCACATTCCA+AGG | 0.565455 | 4_4:-76625312 | Msa0704300:CDS |
| GTTGTGTCTGAGACCAAAAC+CGG | 0.569541 | 4_4:-76625388 | Msa0704300:CDS |
| AGGAAGAAGGGAAATTGAAG+AGG | 0.574994 | 4_4:+76625643 | None:intergenic |
| GAAAATAGGTTAAGAGGTGG+GGG | 0.578509 | 4_4:+76625586 | None:intergenic |
| ACATATCTAATGCCGATGGA+TGG | 0.584345 | 4_4:+76624985 | None:intergenic |
| CTCTTTACAAGAGCCTAATG+AGG | 0.589522 | 4_4:-76623070 | Msa0704300:intron |
| TCTAGTCTCTAAGTTTCCAA+AGG | 0.593019 | 4_4:-76623109 | Msa0704300:CDS |
| AAGAATCTTGAAATCAATGG+AGG | 0.594315 | 4_4:-76625277 | Msa0704300:CDS |
| TCCCGCAATTAAATGGGACA+AGG | 0.596250 | 4_4:-76623736 | Msa0704300:CDS |
| TACCGTGGCACAGAAGCCAC+CGG | 0.596430 | 4_4:-76625344 | Msa0704300:CDS |
| TCGTCTAACACAAGGAAGGA+AGG | 0.605150 | 4_4:-76623931 | Msa0704300:intron |
| TGACTAACCTCATTTATCAT+GGG | 0.605779 | 4_4:+76624302 | None:intergenic |
| AGACATTGTACATCCCTGAC+TGG | 0.617191 | 4_4:-76622888 | Msa0704300:three_prime_UTR |
| CTAGAAAATAGGTTAAGAGG+TGG | 0.619174 | 4_4:+76625583 | None:intergenic |
| CAGACATGAAAGCACGGTCG+GGG | 0.619472 | 4_4:+76624877 | None:intergenic |
| TTATGCTGGAAGTCATGGCA+TGG | 0.621883 | 4_4:-76624551 | Msa0704300:CDS |
| CTTCCAGTAACAATTGCAGT+AGG | 0.624355 | 4_4:+76624720 | None:intergenic |
| TCAAACATATCTAATGCCGA+TGG | 0.625537 | 4_4:+76624981 | None:intergenic |
| GAGGACAAAGAATCAATACA+TGG | 0.625642 | 4_4:-76625258 | Msa0704300:CDS |
| GTGAGAAGTGGATATTGCAA+TGG | 0.629137 | 4_4:+76625610 | None:intergenic |
| AAGCCACCGGCAGCACCGGG+TGG | 0.632503 | 4_4:-76625331 | Msa0704300:CDS |
| CCGAAGCTTCGTCTAACACA+AGG | 0.637863 | 4_4:-76623939 | Msa0704300:CDS |
| GAACTGAGGTGCAGAACTTG+TGG | 0.643653 | 4_4:+76624121 | None:intergenic |
| TTTGTAGAATAACAAAGCAG+AGG | 0.655035 | 4_4:-76624357 | Msa0704300:intron |
| CCCGCAATTAAATGGGACAA+GGG | 0.655310 | 4_4:-76623735 | Msa0704300:CDS |
| CAAGTAGTAATTAGTACGGG+GGG | 0.655720 | 4_4:-76622714 | Msa0704300:three_prime_UTR |
| AGCTTCGTCTAACACAAGGA+AGG | 0.657256 | 4_4:-76623935 | Msa0704300:CDS |
| CCAAGTAGTAATTAGTACGG+GGG | 0.657430 | 4_4:-76622715 | Msa0704300:three_prime_UTR |
| AAAACCGGAATGAATGGTAG+CGG | 0.657999 | 4_4:-76625373 | Msa0704300:CDS |
| TGGTAGCGGTACTATTACCG+TGG | 0.662829 | 4_4:-76625359 | Msa0704300:CDS |
| AAACTGTTAAGAAACTTGCA+AGG | 0.665580 | 4_4:-76624749 | Msa0704300:CDS |
| GAAGATGACTCAAAAGAATG+TGG | 0.668118 | 4_4:-76625410 | Msa0704300:exon |
| GCCAAGTAGTAATTAGTACG+GGG | 0.668981 | 4_4:-76622716 | Msa0704300:three_prime_UTR |
| CCGATTCAGACATGAAAGCA+CGG | 0.680880 | 4_4:+76624871 | None:intergenic |
| GGGAAGAAGACATAGGCTGT+GGG | 0.685814 | 4_4:+76625736 | None:intergenic |
| AACACATCTAAAGTGAACTG+AGG | 0.706405 | 4_4:+76624107 | None:intergenic |
| GGAATGTGAATGTATCCACC+CGG | 0.718303 | 4_4:+76625316 | None:intergenic |
| GATACATTCACATTCCAAGG+AGG | 0.760013 | 4_4:-76625309 | Msa0704300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATAATCTTTTTTTAGTA+AGG | - | chr4_4:76622857-76622876 | Msa0704300:three_prime_UTR | 10.0% |
| !! | CAAAAAAGATAAAAAAAAAA+GGG | + | chr4_4:76623689-76623708 | None:intergenic | 10.0% |
| !! | TCAAAAAAGATAAAAAAAAA+AGG | + | chr4_4:76623690-76623709 | None:intergenic | 10.0% |
| !!! | TTCTAAAAATTAATTAACAT+TGG | - | chr4_4:76623953-76623972 | Msa0704300:CDS | 10.0% |
| !!! | TTTCTTTATAATCAATTTTT+TGG | - | chr4_4:76624447-76624466 | Msa0704300:intron | 10.0% |
| !! | TTCATTTAGAAATAAAAAAT+TGG | + | chr4_4:76625074-76625093 | None:intergenic | 10.0% |
| !! | TTATTAATTTAATATCATTC+AGG | - | chr4_4:76625356-76625375 | Msa0704300:CDS | 10.0% |
| !! | AATATTTAATCATAATCATA+AGG | + | chr4_4:76625709-76625728 | None:intergenic | 10.0% |
| !! | GATTATGATTAAATATTATA+AGG | - | chr4_4:76625712-76625731 | Msa0704300:five_prime_UTR | 10.0% |
| !! | TGTGATATTAATATATTGTT+TGG | - | chr4_4:76622880-76622899 | Msa0704300:three_prime_UTR | 15.0% |
| !! | ATATTAATATATTGTTTGGT+TGG | - | chr4_4:76622884-76622903 | Msa0704300:three_prime_UTR | 15.0% |
| !! | TATTAATATATTGTTTGGTT+GGG | - | chr4_4:76622885-76622904 | Msa0704300:three_prime_UTR | 15.0% |
| !! | AACAACACATATAAATAATA+AGG | + | chr4_4:76623318-76623337 | None:intergenic | 15.0% |
| !! | AGATTAACAGATTTATTTAA+AGG | + | chr4_4:76623526-76623545 | None:intergenic | 15.0% |
| !! | AAATTAATTAACATTGGTAA+TGG | - | chr4_4:76623959-76623978 | Msa0704300:CDS | 15.0% |
| !!! | TTTATAATCAATTTTTTGGA+GGG | - | chr4_4:76624451-76624470 | Msa0704300:intron | 15.0% |
| !! | ATTATTACAAAGAATTAAGA+GGG | - | chr4_4:76624819-76624838 | Msa0704300:intron | 15.0% |
| !! | TTTATTAGTTAGAAAATTGA+TGG | + | chr4_4:76624937-76624956 | None:intergenic | 15.0% |
| !! | AAAAAAACAATTAAGATCAT+TGG | + | chr4_4:76625048-76625067 | None:intergenic | 15.0% |
| !! | ATTTAGAAATAAAAAATTGG+AGG | + | chr4_4:76625071-76625090 | None:intergenic | 15.0% |
| !! | ATCAGTAAAACATATATTTA+AGG | + | chr4_4:76625336-76625355 | None:intergenic | 15.0% |
| !! | ACATAGAAAGAAAAAAAAAA+AGG | + | chr4_4:76625492-76625511 | None:intergenic | 15.0% |
| !! | ATCAAAAGATATGTATTTAT+AGG | - | chr4_4:76625741-76625760 | Msa0704300:five_prime_UTR | 15.0% |
| !! | TGAAGAAAATACTAGAAAAT+AGG | + | chr4_4:76622770-76622789 | None:intergenic | 20.0% |
| !! | TAAGAGTTTCAATGAAATTA+AGG | + | chr4_4:76622824-76622843 | None:intergenic | 20.0% |
| !! | AGATATGTTTGAACAAATTA+TGG | - | chr4_4:76623369-76623388 | Msa0704300:CDS | 20.0% |
| !!! | AAAACAGATTGTTATGTTTT+TGG | - | chr4_4:76623405-76623424 | Msa0704300:intron | 20.0% |
| !!! | TTAGTCTTTGTTTATAAAAC+TGG | - | chr4_4:76623491-76623510 | Msa0704300:intron | 20.0% |
| !! | TTAAAAAATATACTGTACTG+TGG | + | chr4_4:76623884-76623903 | None:intergenic | 20.0% |
| !!! | TTTTACCTTTGTTAATTTTC+AGG | - | chr4_4:76624140-76624159 | Msa0704300:CDS | 20.0% |
| !!! | CTTTATAATCAATTTTTTGG+AGG | - | chr4_4:76624450-76624469 | Msa0704300:intron | 20.0% |
| !! | CTCTTAATTCTTTGTAATAA+TGG | + | chr4_4:76624820-76624839 | None:intergenic | 20.0% |
| !! | CATTATTACAAAGAATTAAG+AGG | - | chr4_4:76624818-76624837 | Msa0704300:intron | 20.0% |
| !! | AATATATATTTAGAAACGCA+TGG | + | chr4_4:76624899-76624918 | None:intergenic | 20.0% |
| !!! | ATTTAATATCATTCAGGTTA+TGG | - | chr4_4:76625362-76625381 | Msa0704300:CDS | 20.0% |
| ! | TGATTTATAGTTGGAAAAAC+AGG | + | chr4_4:76622581-76622600 | None:intergenic | 25.0% |
| ! | ATACTAGAAAATAGGTTAAG+AGG | + | chr4_4:76622762-76622781 | None:intergenic | 25.0% |
| ! | TAACGTATATATCAAACCTT+AGG | + | chr4_4:76622801-76622820 | None:intergenic | 25.0% |
| ! | TTGAAGAATCTTGAAATCAA+TGG | - | chr4_4:76623059-76623078 | Msa0704300:intron | 25.0% |
| ! | AGTATTTGTTCAAAATTTGG+TGG | + | chr4_4:76623236-76623255 | None:intergenic | 25.0% |
| !! | ACCAAATTTTGAACAAATAC+TGG | - | chr4_4:76623235-76623254 | Msa0704300:intron | 25.0% |
| ! | TCCAGTATTTGTTCAAAATT+TGG | + | chr4_4:76623239-76623258 | None:intergenic | 25.0% |
| !!! | GTTATGTTTTTGGATTATGA+TGG | - | chr4_4:76623415-76623434 | Msa0704300:intron | 25.0% |
| ! | TATCACATATATATCAGATG+AGG | - | chr4_4:76623566-76623585 | Msa0704300:intron | 25.0% |
| !! | TTTTTCTGCAAACAATTTTC+AGG | - | chr4_4:76623734-76623753 | Msa0704300:CDS | 25.0% |
| !! | TTTACTCACTTTGTTGTATT+TGG | + | chr4_4:76623838-76623857 | None:intergenic | 25.0% |
| !!! | AATTTTAAGACCTTATTCCA+CGG | + | chr4_4:76623927-76623946 | None:intergenic | 25.0% |
| ! | TACAATAAACAACTTTGAGT+TGG | + | chr4_4:76624327-76624346 | None:intergenic | 25.0% |
| !!! | GAGTGTATATTTTTAATGGT+GGG | - | chr4_4:76624473-76624492 | Msa0704300:intron | 25.0% |
| !!! | AGTGTATATTTTTAATGGTG+GGG | - | chr4_4:76624474-76624493 | Msa0704300:intron | 25.0% |
| ! | GTGTGATTTAATTAGTTCAA+AGG | - | chr4_4:76624497-76624516 | Msa0704300:intron | 25.0% |
| ! | CAATGTCAATTGTTTAATAC+AGG | - | chr4_4:76624567-76624586 | Msa0704300:CDS | 25.0% |
| ! | CAATTGTTTAATACAGGTAT+TGG | - | chr4_4:76624573-76624592 | Msa0704300:CDS | 25.0% |
| ! | GTAGCATATTTATAAGTTTG+TGG | + | chr4_4:76624756-76624775 | None:intergenic | 25.0% |
| ! | TGTAATAATGGTCAAATACT+TGG | + | chr4_4:76624808-76624827 | None:intergenic | 25.0% |
| !! | ACTAATAAATCGTTTTCAAC+AGG | - | chr4_4:76624948-76624967 | Msa0704300:CDS | 25.0% |
| ! | GATGTATTTCCTGTTTATAT+TGG | - | chr4_4:76624987-76625006 | Msa0704300:CDS | 25.0% |
| ! | AGAACTAAACATAATTGACT+TGG | + | chr4_4:76625117-76625136 | None:intergenic | 25.0% |
| !! | TAGTTCTTTGTAAACTGTTT+TGG | - | chr4_4:76625130-76625149 | Msa0704300:intron | 25.0% |
| ! | AAATTAAGAGACATAGATCA+AGG | - | chr4_4:76625198-76625217 | Msa0704300:CDS | 25.0% |
| !! | ATGTATTTTATAACCAGTCA+GGG | + | chr4_4:76625467-76625486 | None:intergenic | 25.0% |
| ! | TACAAAAGAGCAAAAATGTA+TGG | - | chr4_4:76625526-76625545 | Msa0704300:intron | 25.0% |
| ! | TGCTTATTAAGTACTTAGTA+TGG | - | chr4_4:76625779-76625798 | Msa0704300:five_prime_UTR | 25.0% |
| GAAAAACAGGAAAATCCAAA+AGG | + | chr4_4:76622568-76622587 | None:intergenic | 30.0% | |
| TAGAAAATAGGTTAAGAGGT+GGG | + | chr4_4:76622758-76622777 | None:intergenic | 30.0% | |
| TTTCTTCATCACAAAACCTA+AGG | - | chr4_4:76622782-76622801 | Msa0704300:three_prime_UTR | 30.0% | |
| AAGAATCTTGAAATCAATGG+AGG | - | chr4_4:76623062-76623081 | Msa0704300:intron | 30.0% | |
| TTGTATTCTTCAGCTAAAGA+AGG | + | chr4_4:76623152-76623171 | None:intergenic | 30.0% | |
| TAGCTGAAGAATACAATTCT+TGG | - | chr4_4:76623156-76623175 | Msa0704300:intron | 30.0% | |
| AAACTGTTAAGAAACTTGCA+AGG | - | chr4_4:76623590-76623609 | Msa0704300:intron | 30.0% | |
| TTGGATGAACTATATTATGC+TGG | - | chr4_4:76623774-76623793 | Msa0704300:intron | 30.0% | |
| ! | TTGTATTTGGACTCTTTTGT+TGG | + | chr4_4:76623825-76623844 | None:intergenic | 30.0% |
| TTTGTAGAATAACAAAGCAG+AGG | - | chr4_4:76623982-76624001 | Msa0704300:CDS | 30.0% | |
| ATTTGTTCCCATGATAAATG+AGG | - | chr4_4:76624030-76624049 | Msa0704300:intron | 30.0% | |
| TGACTAACCTCATTTATCAT+GGG | + | chr4_4:76624040-76624059 | None:intergenic | 30.0% | |
| GTACACCTGAAAATTAACAA+AGG | + | chr4_4:76624148-76624167 | None:intergenic | 30.0% | |
| ! | CTTTAGATGTGTTGATGAAA+AGG | - | chr4_4:76624242-76624261 | Msa0704300:intron | 30.0% |
| TTGTTTATTGTACACAGAGA+TGG | - | chr4_4:76624335-76624354 | Msa0704300:CDS | 30.0% | |
| TGTTTATTGTACACAGAGAT+GGG | - | chr4_4:76624336-76624355 | Msa0704300:CDS | 30.0% | |
| !! | GAGGGAGTGTATATTTTTAA+TGG | - | chr4_4:76624469-76624488 | Msa0704300:intron | 30.0% |
| !! | GGAGTGTATATTTTTAATGG+TGG | - | chr4_4:76624472-76624491 | Msa0704300:intron | 30.0% |
| !! | GTGTATATTTTTAATGGTGG+GGG | - | chr4_4:76624475-76624494 | Msa0704300:intron | 30.0% |
| TGTTTGATTGTGACAAATGA+AGG | + | chr4_4:76624694-76624713 | None:intergenic | 30.0% | |
| TATAAATATGCTACTGCTCA+TGG | - | chr4_4:76624762-76624781 | Msa0704300:intron | 30.0% | |
| CTATCATCACCAATATAAAC+AGG | + | chr4_4:76624999-76625018 | None:intergenic | 30.0% | |
| GAAATTATGCTTACCTCATT+AGG | + | chr4_4:76625285-76625304 | None:intergenic | 30.0% | |
| ! | CATGTATTTTATAACCAGTC+AGG | + | chr4_4:76625468-76625487 | None:intergenic | 30.0% |
| TAGCCAAGTAGTAATTAGTA+CGG | - | chr4_4:76625621-76625640 | Msa0704300:five_prime_UTR | 30.0% | |
| ! | CTGTGGGTTTGATTTATAGT+TGG | + | chr4_4:76622590-76622609 | None:intergenic | 35.0% |
| AAAGAGAGATAGGGAATCTT+TGG | + | chr4_4:76622674-76622693 | None:intergenic | 35.0% | |
| ATTGCAATGGAATGCAAAAG+AGG | + | chr4_4:76622719-76622738 | None:intergenic | 35.0% | |
| AGAAAATAGGTTAAGAGGTG+GGG | + | chr4_4:76622757-76622776 | None:intergenic | 35.0% | |
| CTAGAAAATAGGTTAAGAGG+TGG | + | chr4_4:76622759-76622778 | None:intergenic | 35.0% | |
| GAAGATGACTCAAAAGAATG+TGG | - | chr4_4:76622929-76622948 | Msa0704300:CDS | 35.0% | |
| TTCTTCAAAATTCTCCTCCT+TGG | + | chr4_4:76623047-76623066 | None:intergenic | 35.0% | |
| GAGGACAAAGAATCAATACA+TGG | - | chr4_4:76623081-76623100 | Msa0704300:CDS | 35.0% | |
| TCAAACATATCTAATGCCGA+TGG | + | chr4_4:76623361-76623380 | None:intergenic | 35.0% | |
| ACAAATTATGGATGCTGCAA+AGG | - | chr4_4:76623381-76623400 | Msa0704300:intron | 35.0% | |
| CAAATTATGGATGCTGCAAA+GGG | - | chr4_4:76623382-76623401 | Msa0704300:intron | 35.0% | |
| TTTCCTACTGCAATTGTTAC+TGG | - | chr4_4:76623616-76623635 | Msa0704300:intron | 35.0% | |
| ! | GGTGTACAATTTTGTTCGTT+TGG | - | chr4_4:76623755-76623774 | Msa0704300:intron | 35.0% |
| CTATATTATGCTGGAAGTCA+TGG | - | chr4_4:76623783-76623802 | Msa0704300:intron | 35.0% | |
| AGTCATGGCATGGATATTAA+AGG | - | chr4_4:76623798-76623817 | Msa0704300:intron | 35.0% | |
| GTCATGGCATGGATATTAAA+GGG | - | chr4_4:76623799-76623818 | Msa0704300:intron | 35.0% | |
| TTCCACGGCACTATATATAT+AGG | + | chr4_4:76623912-76623931 | None:intergenic | 35.0% | |
| ATATATAGTGCCGTGGAATA+AGG | - | chr4_4:76623914-76623933 | Msa0704300:intron | 35.0% | |
| TATCATGGGAACAAATTCTC+TGG | + | chr4_4:76624026-76624045 | None:intergenic | 35.0% | |
| GTGACTAACCTCATTTATCA+TGG | + | chr4_4:76624041-76624060 | None:intergenic | 35.0% | |
| GAGAAAACAAAATCAACTCC+TGG | - | chr4_4:76624180-76624199 | Msa0704300:CDS | 35.0% | |
| ! | AACACATCTAAAGTGAACTG+AGG | + | chr4_4:76624235-76624254 | None:intergenic | 35.0% |
| AGTTCAAAGGTGATTATGAC+AGG | - | chr4_4:76624510-76624529 | Msa0704300:intron | 35.0% | |
| GTTCAAAGGTGATTATGACA+GGG | - | chr4_4:76624511-76624530 | Msa0704300:intron | 35.0% | |
| AGGAAATACATCGTTACAGT+TGG | + | chr4_4:76624979-76624998 | None:intergenic | 35.0% | |
| TACCTTGAATGCATCTTCAT+CGG | + | chr4_4:76625024-76625043 | None:intergenic | 35.0% | |
| ! | AGAGACATAGATCAAGGTTT+TGG | - | chr4_4:76625204-76625223 | Msa0704300:CDS | 35.0% |
| TCTAGTCTCTAAGTTTCCAA+AGG | - | chr4_4:76625230-76625249 | Msa0704300:CDS | 35.0% | |
| AGCCAAGTAGTAATTAGTAC+GGG | - | chr4_4:76625622-76625641 | Msa0704300:five_prime_UTR | 35.0% | |
| CAGAATCACTTCATCTGATA+TGG | + | chr4_4:76625667-76625686 | None:intergenic | 35.0% | |
| TCAGATGAAGTGATTCTGAA+TGG | - | chr4_4:76625669-76625688 | Msa0704300:five_prime_UTR | 35.0% | |
| CAGATGAAGTGATTCTGAAT+GGG | - | chr4_4:76625670-76625689 | Msa0704300:five_prime_UTR | 35.0% | |
| GAAGAGGCAAAAGAGAGATA+GGG | + | chr4_4:76622683-76622702 | None:intergenic | 40.0% | |
| TGAAGAGGCAAAAGAGAGAT+AGG | + | chr4_4:76622684-76622703 | None:intergenic | 40.0% | |
| AGGAAGAAGGGAAATTGAAG+AGG | + | chr4_4:76622699-76622718 | None:intergenic | 40.0% | |
| GGAATGCAAAAGAGGAAGAA+GGG | + | chr4_4:76622711-76622730 | None:intergenic | 40.0% | |
| TGGAATGCAAAAGAGGAAGA+AGG | + | chr4_4:76622712-76622731 | None:intergenic | 40.0% | |
| GTGAGAAGTGGATATTGCAA+TGG | + | chr4_4:76622732-76622751 | None:intergenic | 40.0% | |
| GAAAATAGGTTAAGAGGTGG+GGG | + | chr4_4:76622756-76622775 | None:intergenic | 40.0% | |
| AAAACCGGAATGAATGGTAG+CGG | - | chr4_4:76622966-76622985 | Msa0704300:intron | 40.0% | |
| GTGGATACATTCACATTCCA+AGG | - | chr4_4:76623027-76623046 | Msa0704300:intron | 40.0% | |
| GATACATTCACATTCCAAGG+AGG | - | chr4_4:76623030-76623049 | Msa0704300:intron | 40.0% | |
| GGAGAAGATTTGACATGAGT+TGG | + | chr4_4:76623131-76623150 | None:intergenic | 40.0% | |
| TAACAGTGAGAACAGAGTGA+TGG | + | chr4_4:76623192-76623211 | None:intergenic | 40.0% | |
| ACATATCTAATGCCGATGGA+TGG | + | chr4_4:76623357-76623376 | None:intergenic | 40.0% | |
| TGGTACTTTGTCACCAATTG+TGG | - | chr4_4:76623435-76623454 | Msa0704300:intron | 40.0% | |
| CTTCCAGTAACAATTGCAGT+AGG | + | chr4_4:76623622-76623641 | None:intergenic | 40.0% | |
| CACCTATATATATAGTGCCG+TGG | - | chr4_4:76623907-76623926 | Msa0704300:intron | 40.0% | |
| !! | TACACAGAGATGGGTTGAAT+TGG | - | chr4_4:76624345-76624364 | Msa0704300:CDS | 40.0% |
| ! | CTTCGGGTACTCTTTTAACA+CGG | + | chr4_4:76624386-76624405 | None:intergenic | 40.0% |
| AGATTCGTCCCGCAATTAAA+TGG | - | chr4_4:76624596-76624615 | Msa0704300:intron | 40.0% | |
| GATTCGTCCCGCAATTAAAT+GGG | - | chr4_4:76624597-76624616 | Msa0704300:intron | 40.0% | |
| AATTAAATGGGACAAGGGCA+AGG | - | chr4_4:76624609-76624628 | Msa0704300:intron | 40.0% | |
| TGACCCTAGCAAAAATTCGA+GGG | + | chr4_4:76624635-76624654 | None:intergenic | 40.0% | |
| ! | GAATTTTTGCTAGGGTCACT+TGG | - | chr4_4:76624637-76624656 | Msa0704300:intron | 40.0% |
| ! | TACTGCTCATGGTGATTTGT+TGG | - | chr4_4:76624773-76624792 | Msa0704300:intron | 40.0% |
| ATGAGTAAACTAATCCCACG+AGG | + | chr4_4:76624856-76624875 | None:intergenic | 40.0% | |
| AACCGATGAAGATGCATTCA+AGG | - | chr4_4:76625019-76625038 | Msa0704300:intron | 40.0% | |
| CTCTTTACAAGAGCCTAATG+AGG | - | chr4_4:76625269-76625288 | Msa0704300:CDS | 40.0% | |
| TATGGATTTCCTTCAGCGTT+TGG | - | chr4_4:76625380-76625399 | Msa0704300:CDS | 40.0% | |
| GCCAAGTAGTAATTAGTACG+GGG | - | chr4_4:76625623-76625642 | Msa0704300:five_prime_UTR | 40.0% | |
| CCAAGTAGTAATTAGTACGG+GGG | - | chr4_4:76625624-76625643 | Msa0704300:five_prime_UTR | 40.0% | |
| CAAGTAGTAATTAGTACGGG+GGG | - | chr4_4:76625625-76625644 | Msa0704300:five_prime_UTR | 40.0% | |
| ! | GTTGTGTCTGAGACCAAAAC+CGG | - | chr4_4:76622951-76622970 | Msa0704300:CDS | 45.0% |
| GAGACCAAAACCGGAATGAA+TGG | - | chr4_4:76622960-76622979 | Msa0704300:CDS | 45.0% | |
| ! | GCTACCATTCATTCCGGTTT+TGG | + | chr4_4:76622967-76622986 | None:intergenic | 45.0% |
| AGTACCGCTACCATTCATTC+CGG | + | chr4_4:76622973-76622992 | None:intergenic | 45.0% | |
| GGAATGTGAATGTATCCACC+CGG | + | chr4_4:76623026-76623045 | None:intergenic | 45.0% | |
| ! | TTCAGACATGAAAGCACGGT+CGG | + | chr4_4:76623467-76623486 | None:intergenic | 45.0% |
| CCGATTCAGACATGAAAGCA+CGG | + | chr4_4:76623471-76623490 | None:intergenic | 45.0% | |
| CCGTGCTTTCATGTCTGAAT+CGG | - | chr4_4:76623468-76623487 | Msa0704300:intron | 45.0% | |
| TTATGCTGGAAGTCATGGCA+TGG | - | chr4_4:76623788-76623807 | Msa0704300:intron | 45.0% | |
| ATGGGAACAAATTCTCTGGC+AGG | + | chr4_4:76624022-76624041 | None:intergenic | 45.0% | |
| GAACTTGTGGTTCTCAACTC+TGG | + | chr4_4:76624208-76624227 | None:intergenic | 45.0% | |
| CTTGTGTTAGACGAAGCTTC+GGG | + | chr4_4:76624402-76624421 | None:intergenic | 45.0% | |
| CCTTGTGTTAGACGAAGCTT+CGG | + | chr4_4:76624403-76624422 | None:intergenic | 45.0% | |
| AGCTTCGTCTAACACAAGGA+AGG | - | chr4_4:76624404-76624423 | Msa0704300:intron | 45.0% | |
| TCGTCTAACACAAGGAAGGA+AGG | - | chr4_4:76624408-76624427 | Msa0704300:intron | 45.0% | |
| TCTAACACAAGGAAGGAAGG+TGG | - | chr4_4:76624411-76624430 | Msa0704300:intron | 45.0% | |
| CTAACACAAGGAAGGAAGGT+GGG | - | chr4_4:76624412-76624431 | Msa0704300:intron | 45.0% | |
| TCCCGCAATTAAATGGGACA+AGG | - | chr4_4:76624603-76624622 | Msa0704300:intron | 45.0% | |
| CCCTTGTCCCATTTAATTGC+GGG | + | chr4_4:76624607-76624626 | None:intergenic | 45.0% | |
| CCCGCAATTAAATGGGACAA+GGG | - | chr4_4:76624604-76624623 | Msa0704300:intron | 45.0% | |
| GCCCTTGTCCCATTTAATTG+CGG | + | chr4_4:76624608-76624627 | None:intergenic | 45.0% | |
| ! | AAGGCCCTCGAATTTTTGCT+AGG | - | chr4_4:76624628-76624647 | Msa0704300:intron | 45.0% |
| ! | AGGCCCTCGAATTTTTGCTA+GGG | - | chr4_4:76624629-76624648 | Msa0704300:intron | 45.0% |
| GTGACCCTAGCAAAAATTCG+AGG | + | chr4_4:76624636-76624655 | None:intergenic | 45.0% | |
| AAACTAATCCCACGAGGTGT+AGG | + | chr4_4:76624850-76624869 | None:intergenic | 45.0% | |
| ATCTCCAAGATCACGCTCTA+GGG | - | chr4_4:76625419-76625438 | Msa0704300:intron | 45.0% | |
| AGACATTGTACATCCCTGAC+TGG | - | chr4_4:76625451-76625470 | Msa0704300:intron | 45.0% | |
| CCCCCGTACTAATTACTACT+TGG | + | chr4_4:76625627-76625646 | None:intergenic | 45.0% | |
| !! | TTGAAAAAAAAAAAAAAAAT+TGG | + | chr4_4:76624091-76624110 | None:intergenic | 5.0% |
| !!! | TTAATTTTATTTTTATGTTT+TGG | - | chr4_4:76624667-76624686 | Msa0704300:intron | 5.0% |
| GGGAAGAAGACATAGGCTGT+GGG | + | chr4_4:76622606-76622625 | None:intergenic | 50.0% | |
| GAAGTGGGGGAAGAAGACAT+AGG | + | chr4_4:76622613-76622632 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGTGGAAGTG+GGG | + | chr4_4:76622627-76622646 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGTGGAAGT+GGG | + | chr4_4:76622628-76622647 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGTGGAAG+TGG | + | chr4_4:76622629-76622648 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+TGG | + | chr4_4:76622635-76622654 | None:intergenic | 50.0% | |
| !! | TGGTAGCGGTACTATTACCG+TGG | - | chr4_4:76622980-76622999 | Msa0704300:intron | 50.0% |
| ! | TCAGACATGAAAGCACGGTC+GGG | + | chr4_4:76623466-76623485 | None:intergenic | 50.0% |
| GAACTGAGGTGCAGAACTTG+TGG | + | chr4_4:76624221-76624240 | None:intergenic | 50.0% | |
| CCGAAGCTTCGTCTAACACA+AGG | - | chr4_4:76624400-76624419 | Msa0704300:intron | 50.0% | |
| TATGCAGCAGCTGTGTCCTT+TGG | + | chr4_4:76625249-76625268 | None:intergenic | 50.0% | |
| GGATTTCCTTCAGCGTTTGG+TGG | - | chr4_4:76625383-76625402 | Msa0704300:CDS | 50.0% | |
| CATCTCCAAGATCACGCTCT+AGG | - | chr4_4:76625418-76625437 | Msa0704300:intron | 50.0% | |
| TACACCCTAGAGCGTGATCT+TGG | + | chr4_4:76625426-76625445 | None:intergenic | 50.0% | |
| GGGGAAGAAGACATAGGCTG+TGG | + | chr4_4:76622607-76622626 | None:intergenic | 55.0% | |
| GAGAGAGAGAGTGGAAGTGG+GGG | + | chr4_4:76622626-76622645 | None:intergenic | 55.0% | |
| TCGACAGCTTCGCCATCCAT+CGG | - | chr4_4:76623342-76623361 | Msa0704300:CDS | 55.0% | |
| ! | CAGACATGAAAGCACGGTCG+GGG | + | chr4_4:76623465-76623484 | None:intergenic | 55.0% |
| TGGTTCTCAACTCTGGCACC+AGG | + | chr4_4:76624201-76624220 | None:intergenic | 55.0% | |
| CAAGGAAGGAAGGTGGGTCA+TGG | - | chr4_4:76624418-76624437 | Msa0704300:intron | 55.0% | |
| ! | TCCTTCAGCGTTTGGTGGAG+TGG | - | chr4_4:76625388-76625407 | Msa0704300:CDS | 55.0% |
| TCCACTCCACCAAACGCTGA+AGG | + | chr4_4:76625392-76625411 | None:intergenic | 55.0% | |
| ! | AGAGGTGGGGGTGTGAGAAG+TGG | + | chr4_4:76622744-76622763 | None:intergenic | 60.0% |
| TACCGTGGCACAGAAGCCAC+CGG | - | chr4_4:76622995-76623014 | Msa0704300:intron | 60.0% | |
| !! | ATGTATCCACCCGGTGCTGC+CGG | + | chr4_4:76623017-76623036 | None:intergenic | 60.0% |
| CGGTCGGGGTCATCCACAAT+TGG | + | chr4_4:76623451-76623470 | None:intergenic | 60.0% | |
| AGGGTGACACCTACACCTCG+TGG | - | chr4_4:76624838-76624857 | Msa0704300:intron | 60.0% | |
| GGGTGACACCTACACCTCGT+GGG | - | chr4_4:76624839-76624858 | Msa0704300:intron | 60.0% | |
| TGCCGGTGGCTTCTGTGCCA+CGG | + | chr4_4:76623000-76623019 | None:intergenic | 65.0% | |
| ACAGAAGCCACCGGCAGCAC+CGG | - | chr4_4:76623004-76623023 | Msa0704300:intron | 65.0% | |
| CAGAAGCCACCGGCAGCACC+GGG | - | chr4_4:76623005-76623024 | Msa0704300:intron | 70.0% | |
| !! | TATCCACCCGGTGCTGCCGG+TGG | + | chr4_4:76623014-76623033 | None:intergenic | 70.0% |
| ! | AAGCCACCGGCAGCACCGGG+TGG | - | chr4_4:76623008-76623027 | Msa0704300:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 76622558 | 76625803 | 76622558 | ID=Msa0704300;Name=Msa0704300 |
| chr4_4 | mRNA | 76622558 | 76625803 | 76622558 | ID=Msa0704300-mRNA-1;Parent=Msa0704300;Name=Msa0704300-mRNA-1;_AED=0.18;_eAED=0.18;_QI=251|1|1|1|0.90|0.83|12|357|366 |
| chr4_4 | exon | 76622558 | 76622983 | 76622558 | ID=Msa0704300-mRNA-1:exon:24133;Parent=Msa0704300-mRNA-1 |
| chr4_4 | exon | 76623071 | 76623163 | 76623071 | ID=Msa0704300-mRNA-1:exon:24132;Parent=Msa0704300-mRNA-1 |
| chr4_4 | exon | 76623321 | 76623391 | 76623321 | ID=Msa0704300-mRNA-1:exon:24131;Parent=Msa0704300-mRNA-1 |
| chr4_4 | exon | 76623703 | 76623772 | 76623703 | ID=Msa0704300-mRNA-1:exon:24130;Parent=Msa0704300-mRNA-1 |
| chr4_4 | exon | 76623932 | 76624009 | 76623932 | ID=Msa0704300-mRNA-1:exon:24129;Parent=Msa0704300-mRNA-1 |
| chr4_4 | exon | 76624098 | 76624199 | 76624098 | ID=Msa0704300-mRNA-1:exon:24128;Parent=Msa0704300-mRNA-1 |
| chr4_4 | exon | 76624310 | 76624372 | 76624310 | ID=Msa0704300-mRNA-1:exon:24127;Parent=Msa0704300-mRNA-1 |
| chr4_4 | exon | 76624513 | 76624605 | 76624513 | ID=Msa0704300-mRNA-1:exon:24126;Parent=Msa0704300-mRNA-1 |
| chr4_4 | exon | 76624707 | 76624778 | 76624707 | ID=Msa0704300-mRNA-1:exon:24125;Parent=Msa0704300-mRNA-1 |
| chr4_4 | exon | 76624872 | 76625012 | 76624872 | ID=Msa0704300-mRNA-1:exon:24124;Parent=Msa0704300-mRNA-1 |
| chr4_4 | exon | 76625180 | 76625433 | 76625180 | ID=Msa0704300-mRNA-1:exon:24123;Parent=Msa0704300-mRNA-1 |
| chr4_4 | exon | 76625558 | 76625803 | 76625558 | ID=Msa0704300-mRNA-1:exon:24122;Parent=Msa0704300-mRNA-1 |
| chr4_4 | five_prime_UTR | 76625558 | 76625803 | 76625558 | ID=Msa0704300-mRNA-1:five_prime_utr;Parent=Msa0704300-mRNA-1 |
| chr4_4 | five_prime_UTR | 76625429 | 76625433 | 76625429 | ID=Msa0704300-mRNA-1:five_prime_utr;Parent=Msa0704300-mRNA-1 |
| chr4_4 | CDS | 76625180 | 76625428 | 76625180 | ID=Msa0704300-mRNA-1:cds;Parent=Msa0704300-mRNA-1 |
| chr4_4 | CDS | 76624872 | 76625012 | 76624872 | ID=Msa0704300-mRNA-1:cds;Parent=Msa0704300-mRNA-1 |
| chr4_4 | CDS | 76624707 | 76624778 | 76624707 | ID=Msa0704300-mRNA-1:cds;Parent=Msa0704300-mRNA-1 |
| chr4_4 | CDS | 76624513 | 76624605 | 76624513 | ID=Msa0704300-mRNA-1:cds;Parent=Msa0704300-mRNA-1 |
| chr4_4 | CDS | 76624310 | 76624372 | 76624310 | ID=Msa0704300-mRNA-1:cds;Parent=Msa0704300-mRNA-1 |
| chr4_4 | CDS | 76624098 | 76624199 | 76624098 | ID=Msa0704300-mRNA-1:cds;Parent=Msa0704300-mRNA-1 |
| chr4_4 | CDS | 76623932 | 76624009 | 76623932 | ID=Msa0704300-mRNA-1:cds;Parent=Msa0704300-mRNA-1 |
| chr4_4 | CDS | 76623703 | 76623772 | 76623703 | ID=Msa0704300-mRNA-1:cds;Parent=Msa0704300-mRNA-1 |
| chr4_4 | CDS | 76623321 | 76623391 | 76623321 | ID=Msa0704300-mRNA-1:cds;Parent=Msa0704300-mRNA-1 |
| chr4_4 | CDS | 76623071 | 76623163 | 76623071 | ID=Msa0704300-mRNA-1:cds;Parent=Msa0704300-mRNA-1 |
| chr4_4 | CDS | 76622915 | 76622983 | 76622915 | ID=Msa0704300-mRNA-1:cds;Parent=Msa0704300-mRNA-1 |
| chr4_4 | three_prime_UTR | 76622558 | 76622914 | 76622558 | ID=Msa0704300-mRNA-1:three_prime_utr;Parent=Msa0704300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
