AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0708130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0708130 MtrunA17_Chr8g0390981 96.434 673 11 2 1 673 1 660 0.0 1335
Msa0708130 MtrunA17_Chr8g0390991 95.238 336 16 0 702 1037 1 336 0.0 630
Msa0708130 MtrunA17_Chr8g0390991 89.655 232 24 0 886 1117 335 566 1.51e-125 396
Msa0708130 MtrunA17_Chr8g0390991 88.158 152 18 0 886 1037 260 411 1.70e-79 271
Msa0708130 MtrunA17_Chr3g0102921 54.309 499 200 6 458 932 368 862 7.96e-165 517
Msa0708130 MtrunA17_Chr8g0386901 42.791 652 329 9 34 673 10 629 1.06e-160 491
Msa0708130 MtrunA17_Chr1g0192481 56.398 422 179 3 487 904 17 437 8.03e-160 486
Msa0708130 MtrunA17_Chr1g0195111 55.457 449 189 4 466 911 334 774 6.09e-159 498
Msa0708130 MtrunA17_Chr5g0447041 50.954 524 208 7 458 932 364 887 3.23e-158 501
Msa0708130 MtrunA17_Chr7g0271961 53.333 465 199 4 438 893 307 762 5.32e-154 485
Msa0708130 MtrunA17_Chr6g0484511 65.549 328 103 1 362 679 123 450 1.96e-149 456
Msa0708130 MtrunA17_Chr7g0257301 51.422 457 191 7 458 886 322 775 2.03e-141 453
Msa0708130 MtrunA17_Chr7g0257301 34.000 150 75 4 35 166 21 164 1.25e-12 72.4
Msa0708130 MtrunA17_Chr6g0484501 79.736 227 43 1 672 895 1 227 6.31e-110 342
Msa0708130 MtrunA17_Chr5g0411971 45.980 398 184 7 488 871 355 735 1.03e-94 326
Msa0708130 MtrunA17_Chr5g0421521 45.980 398 184 7 488 871 330 710 1.81e-93 320
Msa0708130 MtrunA17_Chr5g0421591 45.477 398 186 7 488 871 330 710 1.95e-93 319
Msa0708130 MtrunA17_Chr8g0386891 52.247 356 131 9 702 1049 1 325 2.13e-93 305
Msa0708130 MtrunA17_Chr1g0191851 46.027 365 184 5 513 873 132 487 2.81e-92 313
Msa0708130 MtrunA17_Chr7g0272871 46.237 372 183 4 508 873 107 467 2.28e-91 309
Msa0708130 MtrunA17_Chr2g0312631 36.216 555 300 12 387 908 227 760 2.55e-91 316
Msa0708130 MtrunA17_Chr2g0280421 39.293 481 235 13 427 863 305 772 9.74e-85 292
Msa0708130 MtrunA17_Chr4g0042061 37.037 621 326 23 290 869 188 784 9.71e-83 286
Msa0708130 MtrunA17_Chr2g0319271 42.674 389 191 8 504 869 373 752 1.04e-82 286
Msa0708130 MtrunA17_Chr4g0049011 42.703 370 198 5 504 860 253 621 1.12e-79 274
Msa0708130 MtrunA17_Chr7g0269681 57.088 261 94 6 672 928 11 257 1.59e-79 269
Msa0708130 MtrunA17_Chr5g0407791 34.099 566 309 15 344 893 733 1250 4.33e-71 259
Msa0708130 MtrunA17_Chr8g0369881 34.961 512 277 12 391 879 742 1220 1.79e-68 251
Msa0708130 MtrunA17_Chr7g0269691 50.000 222 110 1 456 677 328 548 3.89e-66 234
Msa0708130 MtrunA17_Chr6g0484521 72.258 155 35 2 184 338 30 176 4.20e-65 218
Msa0708130 MtrunA17_Chr8g0367581 37.468 387 218 11 511 893 129 495 6.35e-59 222
Msa0708130 MtrunA17_Chr1g0191181 38.462 351 196 8 516 858 76 414 1.15e-58 214
Msa0708130 MtrunA17_Chr1g0178411 37.949 390 203 11 528 893 13 387 1.42e-57 216
Msa0708130 MtrunA17_Chr7g0266631 37.340 391 206 11 528 894 9 384 1.05e-56 213
Msa0708130 MtrunA17_Chr2g0327581 36.776 397 220 13 515 893 35 418 8.07e-55 208
Msa0708130 MtrunA17_Chr1g0182151 36.269 386 211 10 528 893 54 424 1.64e-53 204
Msa0708130 MtrunA17_Chr4g0069141 37.569 362 190 11 525 864 150 497 6.86e-53 203
Msa0708130 MtrunA17_Chr4g0045381 37.600 375 203 11 573 928 235 597 1.31e-52 202
Msa0708130 MtrunA17_Chr3g0132921 34.715 386 209 13 529 889 10 377 1.17e-51 191
Msa0708130 MtrunA17_Chr3g0122121 36.176 387 208 12 529 893 99 468 1.52e-51 198
Msa0708130 MtrunA17_Chr2g0322291 39.883 341 176 12 573 895 130 459 2.09e-50 195
Msa0708130 MtrunA17_Chr8g0377731 35.910 401 203 13 529 901 56 430 2.45e-50 194
Msa0708130 MtrunA17_Chr4g0062291 33.252 412 242 9 502 893 92 490 8.57e-49 186
Msa0708130 MtrunA17_Chr5g0398521 33.056 360 199 8 527 858 56 401 2.31e-48 187
Msa0708130 MtrunA17_Chr4g0053211 34.759 374 186 12 529 858 13 372 2.39e-48 187
Msa0708130 MtrunA17_Chr2g0307481 36.216 370 207 10 511 867 53 406 4.88e-48 182
Msa0708130 MtrunA17_Chr3g0134191 32.367 414 227 11 529 907 9 404 1.13e-47 185
Msa0708130 MtrunA17_Chr1g0193221 33.747 403 207 12 529 892 4 385 8.95e-46 180
Msa0708130 MtrunA17_Chr1g0153061 31.884 414 229 11 529 907 9 404 2.21e-45 178
Msa0708130 MtrunA17_Chr5g0427481 34.278 353 197 12 529 858 18 358 7.67e-45 177
Msa0708130 MtrunA17_Chr7g0245931 32.312 359 202 10 527 858 51 395 3.55e-44 173
Msa0708130 MtrunA17_Chr1g0152231 34.748 377 207 15 572 930 45 400 3.17e-43 170
Msa0708130 MtrunA17_Chr4g0035661 33.069 378 212 12 526 893 87 433 1.34e-42 169
Msa0708130 MtrunA17_Chr3g0145071 33.687 377 205 11 529 893 100 443 1.74e-42 169
Msa0708130 MtrunA17_Chr6g0483701 33.237 346 204 8 529 864 31 359 3.39e-41 164
Msa0708130 MtrunA17_Chr7g0258991 33.421 380 216 11 523 893 68 419 6.00e-41 164
Msa0708130 MtrunA17_Chr4g0070001 33.092 414 220 19 529 913 144 529 1.37e-40 163
Msa0708130 MtrunA17_Chr3g0142261 32.723 382 219 13 529 895 20 378 2.62e-39 159
Msa0708130 MtrunA17_Chr5g0405181 34.286 350 197 12 529 864 21 351 3.23e-39 158
Msa0708130 MtrunA17_Chr5g0445211 31.969 391 218 14 529 894 75 442 2.77e-37 152
Msa0708130 MtrunA17_Chr7g0238581 31.858 339 200 10 529 853 26 347 3.57e-37 149
Msa0708130 MtrunA17_Chr8g0372171 31.937 382 214 13 529 894 20 371 1.07e-36 150
Msa0708130 MtrunA17_Chr3g0101021 31.078 399 225 12 528 901 75 448 1.07e-35 147
Msa0708130 MtrunA17_Chr4g0036001 31.909 351 209 10 512 851 9 340 2.79e-35 145
Msa0708130 MtrunA17_Chr6g0485471 31.088 386 224 14 512 883 103 460 1.04e-33 139
Msa0708130 MtrunA17_Chr2g0295881 31.549 355 198 12 529 857 198 533 5.94e-33 138
Msa0708130 MtrunA17_Chr4g0067421 30.270 370 215 11 512 857 189 539 1.44e-32 136
Msa0708130 MtrunA17_Chr2g0331761 29.508 366 224 10 529 882 186 529 5.18e-32 134
Msa0708130 MtrunA17_Chr1g0187411 28.351 388 228 12 529 884 131 500 3.31e-24 109
Msa0708130 MtrunA17_Chr6g0470541 28.660 321 189 11 529 835 6 300 6.32e-18 89.7
Msa0708130 MtrunA17_Chr1g0192491 30.894 246 115 8 67 300 72 274 3.24e-15 77.4
Msa0708130 MtrunA17_Chr3g0142841 26.027 292 181 9 575 851 145 416 2.36e-13 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0708130 AT1G63640.1 43.165 1112 505 20 42 1114 42 1065 0.0 794
Msa0708130 AT1G63640.5 43.165 1112 505 20 42 1114 32 1055 0.0 794
Msa0708130 AT1G63640.3 43.127 1113 505 20 42 1114 42 1066 0.0 794
Msa0708130 AT1G63640.4 43.165 1112 505 20 42 1114 42 1065 0.0 794
Msa0708130 AT1G63640.2 42.947 1113 500 20 42 1114 42 1059 0.0 790
Msa0708130 AT1G18410.3 55.016 618 252 10 294 895 251 858 0.0 645
Msa0708130 AT1G18410.3 51.779 253 107 4 188 439 36 274 2.51e-59 222
Msa0708130 AT1G18410.2 55.016 618 252 10 294 895 251 858 0.0 645
Msa0708130 AT1G18410.2 51.779 253 107 4 188 439 36 274 2.51e-59 222
Msa0708130 AT1G73860.2 59.963 537 206 5 365 893 259 794 0.0 644
Msa0708130 AT1G73860.2 60.465 215 77 3 217 430 1 208 4.78e-64 236
Msa0708130 AT1G73860.1 59.963 537 206 5 365 893 342 877 0.0 644
Msa0708130 AT1G73860.1 52.143 280 114 6 153 430 30 291 4.44e-66 243
Msa0708130 AT1G18410.4 55.016 618 252 10 294 895 394 1001 0.0 642
Msa0708130 AT1G18410.4 49.603 252 104 3 188 439 189 417 7.13e-57 215
Msa0708130 AT5G41310.1 51.515 660 260 9 250 905 176 779 0.0 641
Msa0708130 AT5G41310.1 46.341 82 39 2 42 123 43 119 1.63e-13 75.9
Msa0708130 AT1G18410.1 54.531 618 247 10 294 895 394 993 0.0 638
Msa0708130 AT1G18410.1 49.603 252 104 3 188 439 189 417 6.36e-57 215
Msa0708130 AT1G18410.5 54.207 618 244 11 294 895 241 835 0.0 630
Msa0708130 AT1G18410.5 49.603 252 104 3 188 439 36 264 1.67e-57 216
Msa0708130 AT1G09170.4 55.263 456 198 3 434 886 340 792 1.78e-161 500
Msa0708130 AT1G09170.2 55.263 456 198 3 434 886 340 792 7.62e-161 500
Msa0708130 AT1G09170.5 55.263 456 198 3 434 886 340 792 1.38e-159 501
Msa0708130 AT5G27000.1 53.033 511 220 7 384 885 253 752 1.54e-159 499
Msa0708130 AT5G27000.1 25.714 385 190 14 31 395 35 343 9.34e-17 86.3
Msa0708130 AT3G44730.1 55.782 441 189 3 458 894 307 745 2.51e-159 502
Msa0708130 AT3G44730.4 55.782 441 189 3 458 894 307 745 2.51e-159 502
Msa0708130 AT1G09170.3 56.180 445 189 3 434 875 340 781 3.26e-159 493
Msa0708130 AT1G09170.7 56.180 445 189 3 434 875 340 781 3.26e-159 493
Msa0708130 AT3G44730.2 55.782 441 189 3 458 894 352 790 7.39e-159 502
Msa0708130 AT3G44730.3 55.782 441 189 3 458 894 352 790 7.39e-159 502
Msa0708130 AT2G47500.2 51.033 484 216 6 438 916 307 774 3.13e-152 479
Msa0708130 AT2G47500.2 31.606 193 106 7 23 190 28 219 3.82e-13 74.7
Msa0708130 AT2G47500.1 51.033 484 216 6 438 916 307 774 6.64e-152 479
Msa0708130 AT2G47500.1 31.606 193 106 7 23 190 28 219 3.74e-13 74.7
Msa0708130 AT3G10310.1 52.916 463 199 8 427 882 267 717 2.95e-146 464
Msa0708130 AT3G10310.1 41.964 112 51 3 47 144 26 137 1.59e-15 82.4
Msa0708130 AT3G10310.2 52.916 463 199 8 427 882 267 717 5.96e-146 463
Msa0708130 AT3G10310.2 41.964 112 51 3 47 144 26 137 1.87e-15 82.0
Msa0708130 AT1G09170.1 51.754 456 178 2 434 886 340 756 8.85e-145 461
Msa0708130 AT1G09170.6 43.501 577 243 8 249 825 235 728 4.15e-137 432
Msa0708130 AT1G09170.8 43.501 577 243 8 249 825 235 728 4.15e-137 432
Msa0708130 AT1G72250.2 40.590 542 269 13 402 908 354 877 5.82e-100 343
Msa0708130 AT1G72250.4 40.590 542 269 13 402 908 365 888 6.04e-100 343
Msa0708130 AT1G72250.3 40.590 542 269 13 402 908 366 889 7.15e-100 343
Msa0708130 AT1G72250.1 38.669 556 282 10 394 908 331 868 9.02e-99 340
Msa0708130 AT2G22610.2 46.683 407 197 7 506 904 395 789 4.63e-97 333
Msa0708130 AT2G22610.1 46.683 407 197 7 506 904 395 789 5.01e-97 333
Msa0708130 AT2G22610.3 46.683 407 197 7 506 904 396 790 5.72e-97 333
Msa0708130 AT5G27550.2 43.363 452 237 7 432 873 30 472 3.07e-96 324
Msa0708130 AT5G27550.1 43.363 452 237 7 432 873 30 472 3.07e-96 324
Msa0708130 AT5G54670.3 38.278 546 296 12 344 863 149 679 1.05e-90 306
Msa0708130 AT5G54670.1 38.278 546 296 12 344 863 209 739 2.27e-90 307
Msa0708130 AT5G54670.2 38.278 546 296 12 344 863 209 739 2.27e-90 307
Msa0708130 AT4G27180.1 46.524 374 172 8 516 871 375 738 3.10e-88 301
Msa0708130 AT4G27180.2 46.524 374 172 8 516 871 375 738 3.10e-88 301
Msa0708130 AT4G21270.1 44.947 376 179 7 516 871 419 786 1.41e-85 295
Msa0708130 AT4G05190.2 45.652 368 172 7 516 863 403 762 1.85e-85 294
Msa0708130 AT4G05190.1 45.652 368 172 7 516 863 416 775 2.15e-85 294
Msa0708130 AT5G65930.2 34.369 483 282 11 413 888 788 1242 3.21e-65 242
Msa0708130 AT5G65930.1 34.369 483 282 11 413 888 787 1241 3.23e-65 242
Msa0708130 AT5G65930.3 34.369 483 282 11 413 888 794 1248 3.64e-65 241
Msa0708130 AT1G55550.1 32.489 474 263 12 478 941 61 487 9.98e-65 236
Msa0708130 AT5G27950.1 37.853 354 194 9 516 858 67 405 2.53e-59 216
Msa0708130 AT5G65460.2 34.625 413 225 12 511 910 121 501 3.12e-58 219
Msa0708130 AT5G65460.4 34.625 413 225 12 511 910 121 501 4.24e-58 219
Msa0708130 AT5G65460.6 34.625 413 225 12 511 910 121 501 4.28e-58 219
Msa0708130 AT2G36200.1 37.755 392 203 12 528 894 12 387 4.41e-58 218
Msa0708130 AT5G65460.1 34.625 413 225 12 511 910 121 501 5.03e-58 219
Msa0708130 AT3G45850.2 37.887 388 201 14 528 893 55 424 5.58e-58 218
Msa0708130 AT3G45850.1 37.887 388 201 14 528 893 55 424 5.58e-58 218
Msa0708130 AT2G36200.2 37.755 392 203 12 528 894 12 387 6.71e-58 218
Msa0708130 AT2G28620.3 37.306 386 206 12 528 893 50 419 2.09e-57 216
Msa0708130 AT2G28620.2 37.306 386 206 12 528 893 50 419 2.09e-57 216
Msa0708130 AT2G28620.1 37.306 386 206 12 528 893 50 419 2.17e-57 216
Msa0708130 AT5G65460.3 34.293 417 228 13 511 910 121 508 1.24e-56 215
Msa0708130 AT5G10470.2 33.251 406 234 9 511 907 125 502 5.27e-55 210
Msa0708130 AT5G10470.1 33.251 406 234 9 511 907 125 502 5.69e-55 209
Msa0708130 AT2G37420.1 37.435 382 211 10 528 893 48 417 5.09e-53 202
Msa0708130 AT2G37420.2 37.435 382 211 10 528 893 48 417 5.09e-53 202
Msa0708130 AT3G44050.1 37.532 389 205 13 528 895 93 464 1.53e-52 202
Msa0708130 AT4G14150.1 36.504 389 203 14 529 894 92 459 2.04e-52 201
Msa0708130 AT3G17360.2 41.018 334 162 10 573 878 210 536 3.14e-52 202
Msa0708130 AT3G17360.1 41.018 334 162 10 573 878 210 536 3.36e-52 202
Msa0708130 AT3G17360.3 41.018 334 162 10 573 878 210 536 3.37e-52 202
Msa0708130 AT3G23670.2 36.788 386 204 13 529 893 97 463 6.29e-52 199
Msa0708130 AT3G23670.1 37.047 386 203 14 529 893 97 463 8.04e-52 200
Msa0708130 AT3G63480.2 37.966 295 169 5 572 858 47 335 1.00e-51 189
Msa0708130 AT3G19050.1 40.881 318 165 8 573 873 235 546 4.29e-51 198
Msa0708130 AT3G63480.1 38.462 299 166 7 572 858 47 339 1.01e-50 187
Msa0708130 AT5G60930.3 35.040 371 196 11 529 864 7 367 8.12e-48 187
Msa0708130 AT5G60930.1 35.040 371 196 11 529 864 7 367 8.56e-48 187
Msa0708130 AT5G60930.2 35.040 371 196 11 529 864 7 367 1.41e-47 186
Msa0708130 AT1G01950.2 32.778 360 199 9 527 858 59 403 6.09e-47 182
Msa0708130 AT1G12430.1 32.865 356 200 7 529 858 71 413 7.81e-47 182
Msa0708130 AT1G01950.1 32.778 360 199 9 527 858 59 403 8.17e-47 182
Msa0708130 AT1G12430.2 32.865 356 200 7 529 858 71 413 8.21e-47 182
Msa0708130 AT3G49650.1 34.957 349 203 7 529 864 15 352 9.94e-47 181
Msa0708130 AT1G01950.3 32.778 360 199 9 527 858 59 403 1.26e-46 182
Msa0708130 AT5G47820.2 34.783 368 194 12 528 857 11 370 3.15e-46 181
Msa0708130 AT5G47820.1 34.783 368 194 12 528 857 11 370 3.15e-46 181
Msa0708130 AT1G18550.1 35.277 343 195 7 529 857 152 481 2.19e-45 176
Msa0708130 AT3G54870.1 31.832 333 198 7 546 857 117 441 3.08e-45 177
Msa0708130 AT3G54870.3 31.832 333 198 7 546 857 117 441 3.17e-45 177
Msa0708130 AT3G54870.2 31.832 333 198 7 546 857 117 441 4.01e-45 177
Msa0708130 AT4G39050.1 37.386 329 175 10 572 893 138 442 4.05e-45 177
Msa0708130 AT1G59540.1 35.196 358 183 12 572 894 43 386 9.09e-45 175
Msa0708130 AT1G18370.1 33.598 378 211 11 529 894 32 381 1.05e-43 173
Msa0708130 AT2G21380.2 35.714 336 171 11 572 893 144 448 3.05e-43 172
Msa0708130 AT2G21380.1 35.714 336 171 11 572 893 144 448 3.05e-43 172
Msa0708130 AT3G50240.2 33.151 365 200 9 529 858 26 381 3.98e-43 171
Msa0708130 AT5G06670.2 33.777 376 214 11 526 893 64 412 5.35e-43 171
Msa0708130 AT5G06670.3 33.777 376 214 11 526 893 64 412 5.35e-43 171
Msa0708130 AT1G21730.1 35.694 353 191 13 525 864 72 401 5.61e-43 170
Msa0708130 AT5G06670.5 33.777 376 214 11 526 893 64 412 7.76e-43 168
Msa0708130 AT3G50240.4 33.151 365 200 9 529 858 26 381 1.00e-42 170
Msa0708130 AT3G50240.1 33.151 365 200 9 529 858 26 381 1.01e-42 170
Msa0708130 AT5G06670.8 33.777 376 214 11 526 893 64 412 1.14e-42 167
Msa0708130 AT5G06670.4 33.777 376 214 11 526 893 64 412 1.14e-42 167
Msa0708130 AT5G06670.7 33.777 376 214 11 526 893 64 412 1.14e-42 167
Msa0708130 AT3G10180.2 35.376 359 183 10 572 892 39 386 4.83e-42 168
Msa0708130 AT3G10180.1 35.376 359 183 10 572 892 39 386 4.97e-42 168
Msa0708130 AT3G12020.4 32.688 413 236 14 522 915 63 452 5.19e-42 167
Msa0708130 AT3G12020.1 32.688 413 236 14 522 915 63 452 5.19e-42 167
Msa0708130 AT3G12020.3 32.688 413 236 14 522 915 63 452 1.90e-41 166
Msa0708130 AT3G12020.2 32.688 413 236 14 522 915 63 452 1.90e-41 166
Msa0708130 AT5G06670.6 33.247 385 213 12 526 893 64 421 2.02e-41 166
Msa0708130 AT5G06670.1 33.247 385 213 12 526 893 64 421 2.02e-41 166
Msa0708130 AT4G38950.3 31.407 398 222 11 529 893 14 393 5.84e-40 160
Msa0708130 AT4G38950.5 31.407 398 222 11 529 893 14 393 5.84e-40 160
Msa0708130 AT4G38950.4 31.407 398 222 11 529 893 14 393 5.84e-40 160
Msa0708130 AT4G38950.1 31.407 398 222 11 529 893 14 393 5.84e-40 160
Msa0708130 AT4G38950.2 31.407 398 222 11 529 893 14 393 5.84e-40 160
Msa0708130 AT4G24170.1 36.789 299 169 6 572 864 49 333 7.02e-40 161
Msa0708130 AT4G24170.2 36.789 299 169 6 572 864 49 333 7.02e-40 161
Msa0708130 AT3G51150.1 32.565 347 207 9 529 864 18 348 1.46e-39 160
Msa0708130 AT3G51150.2 32.565 347 207 9 529 864 18 348 1.60e-39 160
Msa0708130 AT3G51150.4 32.565 347 207 9 529 864 18 348 1.60e-39 160
Msa0708130 AT3G51150.3 32.565 347 207 9 529 864 18 348 1.60e-39 160
Msa0708130 AT2G21300.2 32.938 337 191 10 529 851 25 340 3.92e-38 155
Msa0708130 AT2G21300.4 32.938 337 191 10 529 851 25 340 3.92e-38 155
Msa0708130 AT2G21300.3 32.938 337 191 10 529 851 25 340 3.92e-38 155
Msa0708130 AT2G21300.1 32.938 337 191 10 529 851 25 340 3.92e-38 155
Msa0708130 AT2G21300.5 32.938 337 191 10 529 851 25 340 3.92e-38 155
Msa0708130 AT5G66310.2 34.333 300 174 8 572 864 66 349 1.91e-37 153
Msa0708130 AT5G66310.3 34.333 300 174 8 572 864 66 349 1.91e-37 153
Msa0708130 AT5G66310.1 34.333 300 174 8 572 864 66 349 1.91e-37 153
Msa0708130 AT3G43210.3 35.030 334 185 11 529 851 30 342 1.94e-37 153
Msa0708130 AT3G43210.5 35.030 334 185 11 529 851 30 342 1.94e-37 153
Msa0708130 AT3G43210.2 35.030 334 185 11 529 851 30 342 1.94e-37 153
Msa0708130 AT3G43210.4 35.030 334 185 11 529 851 30 342 1.94e-37 153
Msa0708130 AT3G43210.1 35.030 334 185 11 529 851 30 342 1.94e-37 153
Msa0708130 AT1G01950.4 33.210 271 152 5 608 858 1 262 5.29e-36 147
Msa0708130 AT5G02370.1 30.233 344 195 9 528 853 20 336 1.02e-35 144
Msa0708130 AT3G16060.1 30.831 373 218 10 507 862 148 497 4.09e-35 144
Msa0708130 AT3G50240.3 36.559 279 143 6 612 858 3 279 3.79e-34 142
Msa0708130 AT3G20150.1 32.320 362 198 12 536 857 82 436 2.56e-33 140
Msa0708130 AT3G20150.2 32.320 362 198 12 536 857 82 436 2.79e-33 140
Msa0708130 AT1G59540.2 35.135 296 148 10 633 894 9 294 1.72e-32 136
Msa0708130 AT3G16630.2 30.532 357 196 12 529 857 194 526 4.91e-31 132
Msa0708130 AT3G16630.1 30.532 357 196 12 529 857 194 526 4.91e-31 132
Msa0708130 AT5G42490.2 33.333 279 163 9 529 800 10 272 1.34e-27 121
Msa0708130 AT5G42490.1 33.333 279 163 9 529 800 10 272 1.41e-27 121
Msa0708130 AT5G27950.2 34.568 243 142 6 627 858 3 239 5.59e-27 116
Msa0708130 AT4G14330.1 29.060 351 215 11 529 867 49 377 1.68e-26 117
Msa0708130 AT5G65460.5 31.801 261 154 7 655 910 14 255 4.51e-25 113
Msa0708130 AT3G51150.5 41.139 158 87 3 713 864 38 195 4.83e-24 110
Msa0708130 AT5G23910.2 27.119 354 209 14 572 902 58 385 5.14e-20 96.7
Msa0708130 AT5G23910.1 27.119 354 209 14 572 902 54 381 5.51e-20 96.3

Find 232 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCATAGCATCTTGCTTAA+TGG 0.138061 4_4:-81628410 None:intergenic
CATATACCTGATGATTTCTT+TGG 0.142993 4_4:-81631213 None:intergenic
ATTGCATAGTCTTCACAATT+TGG 0.208087 4_4:+81631680 Msa0708130:three_prime_UTR
CATGAATTGATATGAATTTC+AGG 0.219351 4_4:+81625493 Msa0708130:five_prime_UTR
TGTATCTTTGTGGAAATCTT+AGG 0.227757 4_4:+81625565 Msa0708130:five_prime_UTR
GTTCAAGCGGTAAGGAAATT+TGG 0.241758 4_4:+81631153 Msa0708130:CDS
ATTCCCTAAGCAATGTTATC+TGG 0.243438 4_4:+81626699 Msa0708130:intron
GAAAAGTTTGATGAATTCTT+TGG 0.245198 4_4:+81626383 Msa0708130:CDS
TTCAATGGAATTGATAGAAT+TGG 0.246918 4_4:+81625677 Msa0708130:CDS
TTCTCACTTGTTGCTCCATT+TGG 0.249324 4_4:-81629299 None:intergenic
ATGTACATCTTTCCCTTCTT+TGG 0.259854 4_4:-81628849 None:intergenic
AATGAAGTTCAAGAATTAAA+AGG 0.260151 4_4:+81628638 Msa0708130:CDS
ACCATTCCTTATAGACAAAA+AGG 0.260650 4_4:+81628769 Msa0708130:CDS
CAAGGAGACGAGAGAATTAT+TGG 0.272171 4_4:+81630288 Msa0708130:CDS
TAATCTTCATTTGGTAGATT+TGG 0.279804 4_4:+81629867 Msa0708130:CDS
TGATTATATTTACATGAATC+TGG 0.283378 4_4:-81631905 None:intergenic
CCTTACCGCTTGAACAGTTC+TGG 0.284491 4_4:-81631145 None:intergenic
ATATACCTGATGATTTCTTT+GGG 0.299699 4_4:-81631212 None:intergenic
AGCTAAACATCGATCAGTTT+TGG 0.303316 4_4:+81625825 Msa0708130:intron
GCCTCATAGACTATGAGATT+TGG 0.306492 4_4:+81629381 Msa0708130:CDS
TGTGCATAGTGTTGTCAAAT+AGG 0.310124 4_4:+81625408 Msa0708130:five_prime_UTR
GTAAGCTTGCTGTTTCTATA+TGG 0.318913 4_4:-81630018 None:intergenic
GACTACAGTACCCAGAGAAT+TGG 0.321198 4_4:+81625637 Msa0708130:CDS
GCTTTAGGTGTTCCAATACT+AGG 0.326716 4_4:-81631607 None:intergenic
TTCAGATGTCATTAAGTTGA+TGG 0.330356 4_4:+81629646 Msa0708130:CDS
AAATAGTCTTCTTCCTTCAT+TGG 0.335319 4_4:+81625858 Msa0708130:CDS
TTCCTTGATTTGCACACACT+TGG 0.341494 4_4:+81629554 Msa0708130:CDS
CAAAACGGTGGCAATAAAAT+AGG 0.342980 4_4:+81631632 Msa0708130:exon
CTGAAAGCTTTGGATGGATT+GGG 0.343783 4_4:+81626146 Msa0708130:CDS
TCAATGGAATTGATAGAATT+GGG 0.345802 4_4:+81625678 Msa0708130:CDS
CGTGGGAAGGATTTCAAGTC+TGG 0.346680 4_4:+81629829 Msa0708130:CDS
GTAGATCGATCTGATGTAAC+TGG 0.347515 4_4:+81629904 Msa0708130:CDS
GGAAGATCTGAATAGCTTCC+AGG 0.353167 4_4:-81627060 None:intergenic
CCTCATAGACTATGAGATTT+GGG 0.354882 4_4:+81629382 Msa0708130:CDS
TTCACCGGACCCGCCATAGA+AGG 0.356160 4_4:-81626549 None:intergenic
GTCGTAGTTTGTTTAGTATC+TGG 0.356495 4_4:-81625945 None:intergenic
TTCTTCGGATTCAAAATATC+AGG 0.359770 4_4:+81628220 Msa0708130:CDS
CACCATTTGGTGTGGACAAC+AGG 0.361444 4_4:+81626481 Msa0708130:CDS
CTTCGGACTACCCAATTCTC+TGG 0.368459 4_4:-81625648 None:intergenic
AAAAGTTTGATGAATTCTTT+GGG 0.371582 4_4:+81626384 Msa0708130:CDS
ACGACCTGGTCCCGTAACTA+TGG 0.373589 4_4:+81625963 Msa0708130:CDS
TTCTTTGAAATGTATCTTTG+TGG 0.376598 4_4:+81625555 Msa0708130:five_prime_UTR
CTGAAATTCATATCAATTCA+TGG 0.376686 4_4:-81625492 None:intergenic
TTTCATTCTTCCCCACCATT+TGG 0.383521 4_4:+81626468 Msa0708130:CDS
TAAAACGTTTCTGAAAGCTT+TGG 0.385889 4_4:+81626136 Msa0708130:CDS
TAGCCAGCTTCAACAGTTGA+AGG 0.391899 4_4:+81627833 Msa0708130:CDS
CAATTCTGCTTTAGCATCCC+TGG 0.394785 4_4:-81628129 None:intergenic
AACTGACGTCTGAGTTAATC+TGG 0.395500 4_4:-81630189 None:intergenic
CATGCATGGTAATCTTCATT+TGG 0.396043 4_4:+81629858 Msa0708130:CDS
AGACATAGGTGAAAGTGATT+TGG 0.401644 4_4:+81628811 Msa0708130:CDS
GTACTCGAGGCACTTGCATC+TGG 0.402111 4_4:+81627668 Msa0708130:CDS
GACGAGAGAATTATTGGAAC+AGG 0.402509 4_4:+81630294 Msa0708130:CDS
TCTGAAAGCTTTGGATGGAT+TGG 0.411229 4_4:+81626145 Msa0708130:CDS
AATTTATAACAGTCTGCAAT+TGG 0.414303 4_4:-81628262 None:intergenic
GAAAGTATTACCATAGTTAC+GGG 0.415524 4_4:-81625973 None:intergenic
CTATGAGATTTGGGTTCAAA+TGG 0.422199 4_4:+81629391 Msa0708130:CDS
ATTACACTCCTCTACATAAA+CGG 0.425657 4_4:-81628440 None:intergenic
TAAGGAGATTGAGGATTCTT+CGG 0.427094 4_4:+81628205 Msa0708130:CDS
TGTAAATATAATCAAGTCAT+TGG 0.428018 4_4:+81631914 Msa0708130:three_prime_UTR
TAGCCCTTCTATGGCGGGTC+CGG 0.428989 4_4:+81626545 Msa0708130:CDS
GCATCAAGCCCTCGTGGGTA+TGG 0.430208 4_4:+81626435 Msa0708130:CDS
TACATCTTTCCCTTCTTTGG+AGG 0.431598 4_4:-81628846 None:intergenic
AGAAAGTATTACCATAGTTA+CGG 0.436470 4_4:-81625974 None:intergenic
GAATGCAGTTAAGGAGATTG+AGG 0.439370 4_4:+81628196 Msa0708130:CDS
GTTTCTCCGTTCACCTGAAA+AGG 0.440318 4_4:+81630824 Msa0708130:CDS
AATGTATGTATATTCGCTTA+TGG 0.442618 4_4:+81629151 Msa0708130:CDS
CAGATGGGGAATTCATTACT+AGG 0.445732 4_4:-81625607 None:intergenic
CCCACGAGGGCTTGATGCAT+TGG 0.446147 4_4:-81626430 None:intergenic
AGAACTGAGGAATGCAGTTA+AGG 0.446648 4_4:+81628187 Msa0708130:CDS
TGCTGTTTCTATATGGTACA+TGG 0.447397 4_4:-81630011 None:intergenic
CAACTTCTGCAAACGTCTCT+TGG 0.452565 4_4:+81630042 Msa0708130:CDS
ATTAAAAGACAATCCACAAC+AGG 0.454077 4_4:-81626351 None:intergenic
CTTCATTTGGTAGATTTGGC+TGG 0.455120 4_4:+81629871 Msa0708130:CDS
TGGCACGTGCTATGTAAATA+CGG 0.456521 4_4:+81631700 Msa0708130:three_prime_UTR
GGTCACAGAGGAAGAAAAGA+AGG 0.458384 4_4:+81627974 Msa0708130:CDS
AACAAATCGCTTTCTGCCCT+CGG 0.458863 4_4:+81629955 Msa0708130:CDS
GTTTCTCCATTCGCCTGAAA+AGG 0.461490 4_4:+81630599 Msa0708130:CDS
GGTGGCATGCTTGTTGAGAA+AGG 0.467353 4_4:+81627454 Msa0708130:CDS
ATATTCGCTTATGGCCAAAC+CGG 0.468096 4_4:+81629160 Msa0708130:CDS
TAATCAAGTCATTGGTATGT+TGG 0.468769 4_4:+81631922 Msa0708130:three_prime_UTR
GCTTATGGCCAAACCGGGTC+CGG 0.473624 4_4:+81629166 Msa0708130:CDS
CTAGTAATGAATTCCCCATC+TGG 0.474084 4_4:+81625608 Msa0708130:exon
CCCAAATCTCATAGTCTATG+AGG 0.474865 4_4:-81629382 None:intergenic
ACATCTTTCCCTTCTTTGGA+GGG 0.475453 4_4:-81628845 None:intergenic
TGTAACTGGGGATAGACTTA+AGG 0.475596 4_4:+81629918 Msa0708130:CDS
AAGATTATTTGAAGATATGT+TGG 0.476204 4_4:+81631793 Msa0708130:three_prime_UTR
ACTACAGTACCCAGAGAATT+GGG 0.476217 4_4:+81625638 Msa0708130:CDS
GTCATTAAGTTGATGGACAT+TGG 0.476978 4_4:+81629653 Msa0708130:CDS
TTGTCAATTTAGTTCCCTAC+AGG 0.477464 4_4:+81628283 Msa0708130:CDS
TTCTTCCCCACCATTTGGTG+TGG 0.481181 4_4:+81626473 Msa0708130:CDS
TCCTTGATTTGCACACACTT+GGG 0.481299 4_4:+81629555 Msa0708130:CDS
GAAGAAGACTATTTAACCAT+TGG 0.487527 4_4:-81625849 None:intergenic
TCCCAAGTGTGTGCAAATCA+AGG 0.488526 4_4:-81629556 None:intergenic
CTTGTTGAGAAAGGTTTCAC+AGG 0.492523 4_4:+81627463 Msa0708130:CDS
TTCGGCCCTGCCGCAACTCA+AGG 0.493045 4_4:+81628896 Msa0708130:CDS
AGAGTTTCCTCAGTTGAACT+AGG 0.493118 4_4:+81630250 Msa0708130:CDS
CTGTAGTCTTTATGCCAGAT+GGG 0.493266 4_4:-81625622 None:intergenic
TTCCTGTTGTCCACACCAAA+TGG 0.497035 4_4:-81626483 None:intergenic
ACGGGGAACATGCTAGCATC+TGG 0.497721 4_4:-81629614 None:intergenic
CCAGAACTGTTCAAGCGGTA+AGG 0.498338 4_4:+81631145 Msa0708130:CDS
GTGCATAGTGTTGTCAAATA+GGG 0.501026 4_4:+81625409 Msa0708130:five_prime_UTR
TTCCCTAAGCAATGTTATCT+GGG 0.502156 4_4:+81626700 Msa0708130:intron
GTGGTAAATCCCTCCAAAGA+AGG 0.504014 4_4:+81628836 Msa0708130:CDS
TGACAACACTTAATAGCGAC+TGG 0.504078 4_4:-81627267 None:intergenic
CTTTAGGTGTTCCAATACTA+GGG 0.505709 4_4:-81631606 None:intergenic
CCAGAAACTGAAATCATTGT+GGG 0.507666 4_4:+81628384 Msa0708130:intron
ATTCCATTGAAAATGTCCTT+CGG 0.509123 4_4:-81625665 None:intergenic
CTCAATTCATGTTCGTGGGA+AGG 0.509216 4_4:+81629816 Msa0708130:CDS
GAAAGCGTCGAGAGAAGAAA+CGG 0.511299 4_4:+81627304 Msa0708130:CDS
ATTTGAAGATATGTTGGTGC+AGG 0.513109 4_4:+81631799 Msa0708130:three_prime_UTR
TACTTGAATTCTTGTCACAT+TGG 0.513209 4_4:+81631954 Msa0708130:three_prime_UTR
CAGATGTGGTAGATGGCATT+CGG 0.514146 4_4:-81631176 None:intergenic
TTACCTTCAACTGTTGAAGC+TGG 0.516926 4_4:-81627836 None:intergenic
GGGATCTATGAAGCCTGTTG+TGG 0.518123 4_4:+81626338 Msa0708130:intron
GTGGTCTCAATTCATGTTCG+TGG 0.519380 4_4:+81629811 Msa0708130:CDS
AATAAACCTTGAGTTGCGGC+AGG 0.519535 4_4:-81628902 None:intergenic
ATACCTGATGATTTCTTTGG+GGG 0.522385 4_4:-81631210 None:intergenic
AGGTATCTTATACCTTCTCT+AGG 0.522675 4_4:-81626193 None:intergenic
ACTGTAGTCTTTATGCCAGA+TGG 0.522951 4_4:-81625623 None:intergenic
CACAGTTGGAAGAAGAAACC+AGG 0.523954 4_4:+81628111 Msa0708130:CDS
CTTAGGTTGCTTATCCCACT+AGG 0.524581 4_4:+81625582 Msa0708130:five_prime_UTR
TTTGTTGAGAAGTCCAATGA+AGG 0.525056 4_4:-81625871 None:intergenic
TTATACACATTAATTGATCT+CGG 0.527080 4_4:-81631857 None:intergenic
ATTAAGCAAGATGCTATGAA+AGG 0.527162 4_4:+81628412 Msa0708130:CDS
TTTGCTACAGATGTGGTAGA+TGG 0.530557 4_4:-81631183 None:intergenic
TGAAGTGAAATGCTCACAGT+TGG 0.530741 4_4:+81628097 Msa0708130:CDS
TTTCTGACAACAAGGAGTCT+CGG 0.533949 4_4:+81630679 Msa0708130:CDS
AAGTCTGGTTCTACCATGCA+TGG 0.537382 4_4:+81629844 Msa0708130:CDS
TTAAGCAAGATGCTATGAAA+GGG 0.544509 4_4:+81628413 Msa0708130:CDS
TTTCTTAGAAATACCACTGA+CGG 0.546949 4_4:-81630496 None:intergenic
GCTGTTTCTATATGGTACAT+GGG 0.547626 4_4:-81630010 None:intergenic
TATACCTGATGATTTCTTTG+GGG 0.547863 4_4:-81631211 None:intergenic
ACGTTTCTGAAAGCTTTGGA+TGG 0.550857 4_4:+81626140 Msa0708130:CDS
TCGAGTACCGATCTTACAAA+AGG 0.555854 4_4:-81629121 None:intergenic
TTTGGGTGATATGACACAAA+GGG 0.556238 4_4:+81625529 Msa0708130:five_prime_UTR
AGGTCTGATATTTCAAACCT+TGG 0.556672 4_4:-81626173 None:intergenic
CTCTTCAATATAGGATGAGA+AGG 0.556956 4_4:+81627953 Msa0708130:intron
TTGACTCAATCTCAATCATA+CGG 0.558775 4_4:+81629581 Msa0708130:CDS
CTCGGCAATCGATTTGAGAT+CGG 0.562089 4_4:-81631839 None:intergenic
AGGTGATATCAAACAACGAA+TGG 0.562769 4_4:+81630560 Msa0708130:CDS
AGGTGATATCAAACAACGAA+TGG 0.562769 4_4:+81630785 Msa0708130:CDS
ATCTACCACATCTGTAGCAA+AGG 0.563240 4_4:+81631185 Msa0708130:CDS
ATCAACTTAATGACATCTGA+AGG 0.565636 4_4:-81629644 None:intergenic
AAAGAAGTAGCCGTTCTCAC+AGG 0.566849 4_4:+81629714 Msa0708130:CDS
TGGATGGATTGGGATTGCCA+AGG 0.567685 4_4:+81626156 Msa0708130:CDS
TATGAGGCTTCCTCTGCTTG+TGG 0.568259 4_4:-81629366 None:intergenic
TTCAGAATTTCCACAAGCAG+AGG 0.568490 4_4:+81629356 Msa0708130:CDS
GGGGTCCTTTGCTACAGATG+TGG 0.569091 4_4:-81631190 None:intergenic
TCCAGAAACTGAAATCATTG+TGG 0.570027 4_4:+81628383 Msa0708130:intron
TTTGTAAGATCGGTACTCGA+TGG 0.570490 4_4:+81629124 Msa0708130:CDS
CAGTCTATTGTAGAAGACAT+AGG 0.571368 4_4:+81628797 Msa0708130:CDS
CTGTTGTCCACACCAAATGG+TGG 0.571386 4_4:-81626480 None:intergenic
TCGCTATTAAGTGTTGTCAA+TGG 0.571393 4_4:+81627271 Msa0708130:CDS
CGTGGAACTTATGACCAACC+TGG 0.575056 4_4:-81627020 None:intergenic
AGGTGAAAGTGATTTGGTTG+TGG 0.575266 4_4:+81628817 Msa0708130:CDS
TCCATTCGCCTGAAAAGGCT+AGG 0.575686 4_4:+81630604 Msa0708130:CDS
TCCGTTCACCTGAAAAGGCT+AGG 0.576096 4_4:+81630829 Msa0708130:CDS
TACCTGATGATTTCTTTGGG+GGG 0.577064 4_4:-81631209 None:intergenic
TGGTATATTAATGAAGCTGA+TGG 0.578057 4_4:-81627000 None:intergenic
TTCGGACTACCCAATTCTCT+GGG 0.578232 4_4:-81625647 None:intergenic
TCACCGGACCCGCCATAGAA+GGG 0.578658 4_4:-81626548 None:intergenic
AAAGATTTAACCTGTGAGAA+CGG 0.579504 4_4:-81629724 None:intergenic
TGGTCTCAATTCATGTTCGT+GGG 0.580421 4_4:+81629812 Msa0708130:CDS
TGGTAAATCCCTCCAAAGAA+GGG 0.581758 4_4:+81628837 Msa0708130:CDS
ATCAGCTTCATTAATATACC+AGG 0.584560 4_4:+81627002 Msa0708130:CDS
TATAAATAAACCTTGAGTTG+CGG 0.584775 4_4:-81628906 None:intergenic
TATTCGCTTATGGCCAAACC+GGG 0.584822 4_4:+81629161 Msa0708130:CDS
CAAATGAAGATTACCATGCA+TGG 0.585102 4_4:-81629857 None:intergenic
TCCAATGCATCAAGCCCTCG+TGG 0.586021 4_4:+81626429 Msa0708130:CDS
CATGAAGTAAGATTATATTG+TGG 0.586816 4_4:-81632096 None:intergenic
TAGATCGATCTGATGTAACT+GGG 0.587217 4_4:+81629905 Msa0708130:CDS
ATTACCATAGTTACGGGACC+AGG 0.587388 4_4:-81625967 None:intergenic
TGTTGTCCACACCAAATGGT+GGG 0.588918 4_4:-81626479 None:intergenic
CTGTTTCTATATGGTACATG+GGG 0.589847 4_4:-81630009 None:intergenic
GAACACCTAAAGCTCCAAAA+CGG 0.591804 4_4:+81631617 Msa0708130:CDS
AGGGAAAACCGTTTATGTAG+AGG 0.593319 4_4:+81628432 Msa0708130:CDS
AACGGTGGCAATAAAATAGG+AGG 0.593475 4_4:+81631635 Msa0708130:exon
TCACTGAACGCCTCCGTCAG+TGG 0.595960 4_4:+81630483 Msa0708130:CDS
CGGATTCAAAATATCAGGAG+TGG 0.598843 4_4:+81628225 Msa0708130:CDS
TCACTGAGCGCGTCCGTCGG+TGG 0.599386 4_4:+81630708 Msa0708130:CDS
TTCATTACTAGGTTCCTAGT+GGG 0.599408 4_4:-81625596 None:intergenic
TTCTCAACAAATGTCACAGA+TGG 0.602993 4_4:+81625883 Msa0708130:CDS
AACACTTAATAGCGACTGGG+TGG 0.606247 4_4:-81627263 None:intergenic
AAGGCTAGGCGAGTAACTCA+AGG 0.607220 4_4:+81630618 Msa0708130:CDS
AAGGCTAGGCGAGTAACTCA+AGG 0.607220 4_4:+81630843 Msa0708130:CDS
AAATCACTGAGCGCGTCCGT+CGG 0.607472 4_4:+81630705 Msa0708130:CDS
TGGAACTAGAGAAGAGAGTG+AGG 0.608664 4_4:+81627688 Msa0708130:CDS
TCCGTCTCGCAGTTGCTGTG+TGG 0.608668 4_4:-81631732 None:intergenic
GGAAGCTTACATCTGAGTCA+AGG 0.612208 4_4:+81626502 Msa0708130:CDS
GTTTGATATCACCTTCAACA+AGG 0.612933 4_4:-81630551 None:intergenic
GTTTGATATCACCTTCAACA+AGG 0.612933 4_4:-81630776 None:intergenic
AACAGTCAATGTGAGGTGGA+AGG 0.613000 4_4:+81625710 Msa0708130:CDS
GCTTCATTAATATACCAGGT+TGG 0.616851 4_4:+81627006 Msa0708130:CDS
GCTCTCAGCACAGAAACTGA+TGG 0.620204 4_4:+81630924 Msa0708130:CDS
TGCTTGTGGAAATTCTGAAG+AGG 0.620627 4_4:-81629352 None:intergenic
GTCAAGAATAAGAGTACTCG+AGG 0.624179 4_4:+81627655 Msa0708130:CDS
TCCACACAGCAACTGCGAGA+CGG 0.624466 4_4:+81631731 Msa0708130:three_prime_UTR
ATTCATTACTAGGTTCCTAG+TGG 0.627462 4_4:-81625597 None:intergenic
CAGAGAATTGGGTAGTCCGA+AGG 0.627997 4_4:+81625649 Msa0708130:CDS
TTCTGAGATGCATGTATGAG+TGG 0.628179 4_4:-81628578 None:intergenic
GGCAAAGATTACATCTCCGA+GGG 0.630186 4_4:-81629971 None:intergenic
ATTATCCAGAACTGTTCAAG+CGG 0.630315 4_4:+81631140 Msa0708130:CDS
CTTTGGGTGATATGACACAA+AGG 0.633351 4_4:+81625528 Msa0708130:five_prime_UTR
TGAAATATCAGACCTAGAGA+AGG 0.633727 4_4:+81626181 Msa0708130:CDS
GTTGTCCACACCAAATGGTG+GGG 0.633986 4_4:-81626478 None:intergenic
AGTAAACAGTCAATGTGAGG+TGG 0.636730 4_4:+81625706 Msa0708130:CDS
AGGAGCTGCACGAAATAACA+AGG 0.643060 4_4:+81630270 Msa0708130:CDS
CCAATGCATCAAGCCCTCGT+GGG 0.645424 4_4:+81626430 Msa0708130:CDS
CTTAGAAATACCACTGACGG+AGG 0.648827 4_4:-81630493 None:intergenic
ACACTTAATAGCGACTGGGT+GGG 0.660957 4_4:-81627262 None:intergenic
GACAACACTTAATAGCGACT+GGG 0.660965 4_4:-81627266 None:intergenic
ATAAACCTTGAGTTGCGGCA+GGG 0.661991 4_4:-81628901 None:intergenic
TGTAGTCTTTATGCCAGATG+GGG 0.663824 4_4:-81625621 None:intergenic
TGTAGTAAACAGTCAATGTG+AGG 0.665373 4_4:+81625703 Msa0708130:CDS
GTTCTGCTTGTGTTGATATG+CGG 0.666991 4_4:-81627496 None:intergenic
TGCAGCTCCTAGTTCAACTG+AGG 0.670154 4_4:-81630257 None:intergenic
TTAAGAGCATGCTTGAGCAG+TGG 0.671840 4_4:+81625910 Msa0708130:CDS
TAGGTTGACGAAAATGCTAG+AGG 0.672188 4_4:+81628016 Msa0708130:CDS
GGGCAAAGATTACATCTCCG+AGG 0.679565 4_4:-81629972 None:intergenic
CACCTAAAGCTCCAAAACGG+TGG 0.682166 4_4:+81631620 Msa0708130:CDS
ATACTAAACAAACTACGACC+TGG 0.683316 4_4:+81625949 Msa0708130:CDS
TCTCTTAGAAATACCACCGA+CGG 0.689341 4_4:-81630721 None:intergenic
TGCACAGAACAATATCGACT+AGG 0.691579 4_4:-81625391 None:intergenic
GGAGCAACAAGTGAGAAACT+CGG 0.693735 4_4:+81629305 Msa0708130:CDS
TCGAAGATCCATACCCACGA+GGG 0.701487 4_4:-81626443 None:intergenic
AGTATCGACTCGAAGAACTG+AGG 0.702986 4_4:+81628174 Msa0708130:CDS
CTCGAAGATCCATACCCACG+AGG 0.704068 4_4:-81626444 None:intergenic
AGATCGATCTGATGTAACTG+GGG 0.710642 4_4:+81629906 Msa0708130:CDS
ACAGTTGGAAGAAGAAACCA+GGG 0.711857 4_4:+81628112 Msa0708130:CDS
ATAGGATGAGAAGGTCACAG+AGG 0.726695 4_4:+81627962 Msa0708130:intron
GAATAGCGGTTATAGCGTAG+CGG 0.740191 4_4:+81625361 None:intergenic
GGTTGGTCATAAGTTCCACG+AGG 0.747813 4_4:+81627023 Msa0708130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTAAAGATATTTTTAAAAA+AGG - chr4_4:81629479-81629498 None:intergenic 10.0%
!! AAAATTTGAAGGAATATATA+AGG - chr4_4:81627757-81627776 None:intergenic 15.0%
!! AAAACGAAAAAGAAATAATT+AGG + chr4_4:81627997-81628016 Msa0708130:CDS 15.0%
!! AATTACATTCAAATGATTAA+AGG - chr4_4:81628537-81628556 None:intergenic 15.0%
!!! TTTAAATTCAACAAGATTTT+CGG + chr4_4:81628878-81628897 Msa0708130:CDS 15.0%
!!! TTTAAAAAAGGATATCTTTT+TGG - chr4_4:81629467-81629486 None:intergenic 15.0%
!! AAAGTGATAATTTACTATAT+AGG + chr4_4:81631499-81631518 Msa0708130:intron 15.0%
!! AATTTACTTCAACAATACAT+TGG + chr4_4:81626013-81626032 Msa0708130:intron 20.0%
!! ATAATCTATGCATAAAATCA+CGG - chr4_4:81626238-81626257 None:intergenic 20.0%
!! AAAAGTTTGATGAATTCTTT+GGG + chr4_4:81626384-81626403 Msa0708130:CDS 20.0%
!! ATGAGTTTAATAAAATTCAC+CGG - chr4_4:81626567-81626586 None:intergenic 20.0%
!! AAAATCCAATTTCATAAACA+CGG + chr4_4:81626632-81626651 Msa0708130:intron 20.0%
!! TTCTTGTATTTATAAGTGAT+TGG + chr4_4:81626950-81626969 Msa0708130:intron 20.0%
!! ACAATATTTATGAAACTGTA+TGG - chr4_4:81627411-81627430 None:intergenic 20.0%
!!! TGTTATTTTTGTTTGTTTAG+CGG + chr4_4:81627432-81627451 Msa0708130:intron 20.0%
!!! TCTAGTCATATTTTTAAAAG+TGG + chr4_4:81627729-81627748 Msa0708130:intron 20.0%
!!! TTCCTTCAAATTTTGAAAAT+TGG + chr4_4:81627763-81627782 Msa0708130:intron 20.0%
!!! TACCAATTTTCAAAATTTGA+AGG - chr4_4:81627768-81627787 None:intergenic 20.0%
!! ATATTGATATACTATAGACA+CGG + chr4_4:81627888-81627907 Msa0708130:intron 20.0%
!!! TTTCACTTCATATGTTTTTT+TGG - chr4_4:81628087-81628106 None:intergenic 20.0%
!!! ACATTTTTTTATTTTCAGCA+AGG - chr4_4:81628616-81628635 None:intergenic 20.0%
!! AATGAAGTTCAAGAATTAAA+AGG + chr4_4:81628638-81628657 Msa0708130:CDS 20.0%
!! CACTTACATAATATACAAAA+GGG - chr4_4:81628688-81628707 None:intergenic 20.0%
!! ACACTTACATAATATACAAA+AGG - chr4_4:81628689-81628708 None:intergenic 20.0%
!! AAACATTACAACTAAAACTA+AGG - chr4_4:81629034-81629053 None:intergenic 20.0%
!! ATAAAATCAATATGTCAAGA+GGG - chr4_4:81629215-81629234 None:intergenic 20.0%
!! TATAAAATCAATATGTCAAG+AGG - chr4_4:81629216-81629235 None:intergenic 20.0%
!! AATAAAAAGCTTTCATTTCA+AGG - chr4_4:81629759-81629778 None:intergenic 20.0%
!!! AAAATTCAAAAAGTATCAAG+TGG + chr4_4:81630516-81630535 Msa0708130:CDS 20.0%
!!! TTTCTTCACAATTTAATTTC+AGG + chr4_4:81631571-81631590 Msa0708130:intron 20.0%
!! AAGATTATTTGAAGATATGT+TGG + chr4_4:81631793-81631812 Msa0708130:three_prime_UTR 20.0%
!! TTATACACATTAATTGATCT+CGG - chr4_4:81631860-81631879 None:intergenic 20.0%
!! TGATTATATTTACATGAATC+TGG - chr4_4:81631908-81631927 None:intergenic 20.0%
!! TGTAAATATAATCAAGTCAT+TGG + chr4_4:81631914-81631933 Msa0708130:three_prime_UTR 20.0%
! CTGAAATTCATATCAATTCA+TGG - chr4_4:81625495-81625514 None:intergenic 25.0%
! CATGAATTGATATGAATTTC+AGG + chr4_4:81625493-81625512 Msa0708130:five_prime_UTR 25.0%
!!! TTCTTTGAAATGTATCTTTG+TGG + chr4_4:81625555-81625574 Msa0708130:five_prime_UTR 25.0%
! TTCAATGGAATTGATAGAAT+TGG + chr4_4:81625677-81625696 Msa0708130:CDS 25.0%
! TCAATGGAATTGATAGAATT+GGG + chr4_4:81625678-81625697 Msa0708130:CDS 25.0%
!!! AGAAAGTATTACCATAGTTA+CGG - chr4_4:81625977-81625996 None:intergenic 25.0%
! ACAAAAAAATCCAGATTGAA+AGG - chr4_4:81626067-81626086 None:intergenic 25.0%
!!! AATCTGGATTTTTTTGTTGT+AGG + chr4_4:81626070-81626089 Msa0708130:intron 25.0%
!! TTAACATTTTCTGATTGTGA+TGG - chr4_4:81626119-81626138 None:intergenic 25.0%
! AATCACGGTACAAAAAAAAT+AGG - chr4_4:81626223-81626242 None:intergenic 25.0%
! GAAAAGTTTGATGAATTCTT+TGG + chr4_4:81626383-81626402 Msa0708130:CDS 25.0%
! GTTAATGAGAAAACTTATCT+AGG + chr4_4:81626661-81626680 Msa0708130:intron 25.0%
!!! TCGTTTTTATAGTACAAGTT+AGG - chr4_4:81626730-81626749 None:intergenic 25.0%
! ATACAAGAACGCAATATAAT+CGG - chr4_4:81626939-81626958 None:intergenic 25.0%
!!! CATCATTTCTGATATTTTTG+CGG - chr4_4:81627088-81627107 None:intergenic 25.0%
! ATCTGAATACATGTATCTAA+AGG - chr4_4:81627147-81627166 None:intergenic 25.0%
!!! GTTATTTTTGTTTGTTTAGC+GGG + chr4_4:81627433-81627452 Msa0708130:intron 25.0%
!! TCAGCAAAGTAATCTTTTTA+AGG + chr4_4:81627613-81627632 Msa0708130:intron 25.0%
!!! AAAGTAATCTTTTTAAGGCT+CGG + chr4_4:81627618-81627637 Msa0708130:CDS 25.0%
! TATTGATATACTATAGACAC+GGG + chr4_4:81627889-81627908 Msa0708130:intron 25.0%
! AATTTATAACAGTCTGCAAT+TGG - chr4_4:81628265-81628284 None:intergenic 25.0%
! CAATGTCAATGTTATAATTG+TGG + chr4_4:81628323-81628342 Msa0708130:intron 25.0%
! AAGCACAAAATTGTAATGTT+TGG - chr4_4:81628351-81628370 None:intergenic 25.0%
! AAATGACATTCTAACAACAA+AGG - chr4_4:81628478-81628497 None:intergenic 25.0%
!!! CATTTGAATGTAATTTGTTC+AGG + chr4_4:81628542-81628561 Msa0708130:intron 25.0%
!!! TTTTTTATTTTCAGCAAGGA+CGG - chr4_4:81628612-81628631 None:intergenic 25.0%
!! GTTTTTCCTTTTTGTCTATA+AGG - chr4_4:81628778-81628797 None:intergenic 25.0%
!! TATAAATAAACCTTGAGTTG+CGG - chr4_4:81628909-81628928 None:intergenic 25.0%
!!! TCTATTCCATTTTTGAGATT+AGG + chr4_4:81628932-81628951 Msa0708130:intron 25.0%
!! AATTTTCATCTCTGGATATA+AGG - chr4_4:81628973-81628992 None:intergenic 25.0%
! AATGTATGTATATTCGCTTA+TGG + chr4_4:81629151-81629170 Msa0708130:CDS 25.0%
! AGAGAAGAAAAAGCTAATAA+GGG - chr4_4:81629531-81629550 None:intergenic 25.0%
! TAATCTTCATTTGGTAGATT+TGG + chr4_4:81629867-81629886 Msa0708130:CDS 25.0%
! GTATTCAATTTACATGAACA+AGG - chr4_4:81630327-81630346 None:intergenic 25.0%
! TTCATGTAAATTGAATACGT+CGG + chr4_4:81630329-81630348 Msa0708130:intron 25.0%
!!! CACTATTTTGAAAAAAGATG+AGG + chr4_4:81630443-81630462 Msa0708130:CDS 25.0%
!!! AGAATTCAAAAAGTATCAAG+TGG + chr4_4:81630741-81630760 Msa0708130:CDS 25.0%
! ATATACCTGATGATTTCTTT+GGG - chr4_4:81631215-81631234 None:intergenic 25.0%
! AATGAATTTAACTCCTCTAA+AGG + chr4_4:81631344-81631363 Msa0708130:intron 25.0%
! ATCGATAGTTAATGAATCAT+CGG + chr4_4:81631393-81631412 Msa0708130:intron 25.0%
! TAGACTCAAATATCAATTGA+TGG + chr4_4:81631451-81631470 Msa0708130:intron 25.0%
! CATGAAGTAAGATTATATTG+TGG - chr4_4:81632099-81632118 None:intergenic 25.0%
!! TCAGGCTTTGAAAAATTCTT+TGG + chr4_4:81625511-81625530 Msa0708130:five_prime_UTR 30.0%
!! CAGGCTTTGAAAAATTCTTT+GGG + chr4_4:81625512-81625531 Msa0708130:five_prime_UTR 30.0%
TGTATCTTTGTGGAAATCTT+AGG + chr4_4:81625565-81625584 Msa0708130:five_prime_UTR 30.0%
ATTCCATTGAAAATGTCCTT+CGG - chr4_4:81625668-81625687 None:intergenic 30.0%
GAAGAAGACTATTTAACCAT+TGG - chr4_4:81625852-81625871 None:intergenic 30.0%
AAATAGTCTTCTTCCTTCAT+TGG + chr4_4:81625858-81625877 Msa0708130:CDS 30.0%
!! GAAAGTATTACCATAGTTAC+GGG - chr4_4:81625976-81625995 None:intergenic 30.0%
! CAATTTTGCTTTCAGAATTC+AGG + chr4_4:81626037-81626056 Msa0708130:intron 30.0%
! TAAAACGTTTCTGAAAGCTT+TGG + chr4_4:81626136-81626155 Msa0708130:CDS 30.0%
GTACAAAAAAAATAGGTGCT+AGG - chr4_4:81626216-81626235 None:intergenic 30.0%
!!! ACTGTCTCTTTTGTTGTTTA+GGG + chr4_4:81626318-81626337 Msa0708130:intron 30.0%
ATTAAAAGACAATCCACAAC+AGG - chr4_4:81626354-81626373 None:intergenic 30.0%
TGGTATATTAATGAAGCTGA+TGG - chr4_4:81627003-81627022 None:intergenic 30.0%
ATCAGCTTCATTAATATACC+AGG + chr4_4:81627002-81627021 Msa0708130:CDS 30.0%
!! GTTTAATTTGAAAAACCTCG+TGG - chr4_4:81627041-81627060 None:intergenic 30.0%
!! GAGGTTTTTCAAATTAAACC+TGG + chr4_4:81627042-81627061 Msa0708130:CDS 30.0%
AGATGTTAAGAACGATGTAA+CGG - chr4_4:81627539-81627558 None:intergenic 30.0%
!!! AAGTAATCTTTTTAAGGCTC+GGG + chr4_4:81627619-81627638 Msa0708130:CDS 30.0%
AATGCTAGAGGACAAAAATT+TGG + chr4_4:81628028-81628047 Msa0708130:CDS 30.0%
TTCAGAATTGAAGCAAAAAC+TGG + chr4_4:81628055-81628074 Msa0708130:CDS 30.0%
TTCTTCGGATTCAAAATATC+AGG + chr4_4:81628220-81628239 Msa0708130:CDS 30.0%
!!! CATTTTTAAGTGTACCTGTA+GGG - chr4_4:81628300-81628319 None:intergenic 30.0%
!!! ACATTTTTAAGTGTACCTGT+AGG - chr4_4:81628301-81628320 None:intergenic 30.0%
TTTCATAGCATCTTGCTTAA+TGG - chr4_4:81628413-81628432 None:intergenic 30.0%
ATTAAGCAAGATGCTATGAA+AGG + chr4_4:81628412-81628431 Msa0708130:CDS 30.0%
TTAAGCAAGATGCTATGAAA+GGG + chr4_4:81628413-81628432 Msa0708130:CDS 30.0%
ATTACACTCCTCTACATAAA+CGG - chr4_4:81628443-81628462 None:intergenic 30.0%
!! CACACATTGTTTTATGATAC+AGG + chr4_4:81628719-81628738 Msa0708130:intron 30.0%
ACCATTCCTTATAGACAAAA+AGG + chr4_4:81628769-81628788 Msa0708130:CDS 30.0%
! TCCTTTTTGTCTATAAGGAA+TGG - chr4_4:81628773-81628792 None:intergenic 30.0%
! TGATGCAAAATTTTCATCTC+TGG - chr4_4:81628981-81629000 None:intergenic 30.0%
AAACTGTAATATCGATACAC+AGG - chr4_4:81629009-81629028 None:intergenic 30.0%
! CATTCAACCTTTTGTAAGAT+CGG + chr4_4:81629114-81629133 Msa0708130:CDS 30.0%
! TACCATTGTGTAAGTTTTTC+CGG - chr4_4:81629188-81629207 None:intergenic 30.0%
! AGAAGGTGATTTGTACAATA+AGG - chr4_4:81629265-81629284 None:intergenic 30.0%
CAGAGAAGAAAAAGCTAATA+AGG - chr4_4:81629532-81629551 None:intergenic 30.0%
!!! CTTATTAGCTTTTTCTTCTC+TGG + chr4_4:81629530-81629549 Msa0708130:intron 30.0%
TTGACTCAATCTCAATCATA+CGG + chr4_4:81629581-81629600 Msa0708130:CDS 30.0%
ATCAACTTAATGACATCTGA+AGG - chr4_4:81629647-81629666 None:intergenic 30.0%
!! TTCAGATGTCATTAAGTTGA+TGG + chr4_4:81629646-81629665 Msa0708130:CDS 30.0%
GGACTTAAAAATAGAGCAAT+CGG + chr4_4:81629674-81629693 Msa0708130:CDS 30.0%
AAAGATTTAACCTGTGAGAA+CGG - chr4_4:81629727-81629746 None:intergenic 30.0%
ATGTTCATCTGCTTAACTTT+CGG + chr4_4:81630072-81630091 Msa0708130:intron 30.0%
TTTCTTAGAAATACCACTGA+CGG - chr4_4:81630499-81630518 None:intergenic 30.0%
! AATGGAGAAACTCAGTTTTA+TGG - chr4_4:81630590-81630609 None:intergenic 30.0%
! AAGTGATTTTTCTGACAACA+AGG + chr4_4:81630671-81630690 Msa0708130:CDS 30.0%
! AACTAACAGCATATTTTCAG+AGG + chr4_4:81631022-81631041 Msa0708130:intron 30.0%
!! AATTTTGATCTGTGTTTTGC+AGG + chr4_4:81631109-81631128 Msa0708130:intron 30.0%
TATACCTGATGATTTCTTTG+GGG - chr4_4:81631214-81631233 None:intergenic 30.0%
CATATACCTGATGATTTCTT+TGG - chr4_4:81631216-81631235 None:intergenic 30.0%
ATTGCATAGTCTTCACAATT+TGG + chr4_4:81631680-81631699 Msa0708130:three_prime_UTR 30.0%
TAATCAAGTCATTGGTATGT+TGG + chr4_4:81631922-81631941 Msa0708130:three_prime_UTR 30.0%
TACTTGAATTCTTGTCACAT+TGG + chr4_4:81631954-81631973 Msa0708130:three_prime_UTR 30.0%
TGTGCATAGTGTTGTCAAAT+AGG + chr4_4:81625408-81625427 Msa0708130:five_prime_UTR 35.0%
GTGCATAGTGTTGTCAAATA+GGG + chr4_4:81625409-81625428 Msa0708130:five_prime_UTR 35.0%
TTTGGGTGATATGACACAAA+GGG + chr4_4:81625529-81625548 Msa0708130:five_prime_UTR 35.0%
TTCATTACTAGGTTCCTAGT+GGG - chr4_4:81625599-81625618 None:intergenic 35.0%
ATTCATTACTAGGTTCCTAG+TGG - chr4_4:81625600-81625619 None:intergenic 35.0%
TGTAGTAAACAGTCAATGTG+AGG + chr4_4:81625703-81625722 Msa0708130:CDS 35.0%
! AGCTAAACATCGATCAGTTT+TGG + chr4_4:81625825-81625844 Msa0708130:intron 35.0%
TTTGTTGAGAAGTCCAATGA+AGG - chr4_4:81625874-81625893 None:intergenic 35.0%
TTCTCAACAAATGTCACAGA+TGG + chr4_4:81625883-81625902 Msa0708130:CDS 35.0%
!! GTCGTAGTTTGTTTAGTATC+TGG - chr4_4:81625948-81625967 None:intergenic 35.0%
ATACTAAACAAACTACGACC+TGG + chr4_4:81625949-81625968 Msa0708130:CDS 35.0%
TTCAGGTATACCTTTCAATC+TGG + chr4_4:81626054-81626073 Msa0708130:intron 35.0%
AGGTCTGATATTTCAAACCT+TGG - chr4_4:81626176-81626195 None:intergenic 35.0%
TGAAATATCAGACCTAGAGA+AGG + chr4_4:81626181-81626200 Msa0708130:CDS 35.0%
AGGTATCTTATACCTTCTCT+AGG - chr4_4:81626196-81626215 None:intergenic 35.0%
CTAAACAACAAAAGAGACAG+TGG - chr4_4:81626319-81626338 None:intergenic 35.0%
!!! CACTGTCTCTTTTGTTGTTT+AGG + chr4_4:81626317-81626336 Msa0708130:intron 35.0%
!! TATGAGTTTTAGCCCTTCTA+TGG + chr4_4:81626536-81626555 Msa0708130:CDS 35.0%
TGTCACCGTGTTTATGAAAT+TGG - chr4_4:81626640-81626659 None:intergenic 35.0%
ATTCCCTAAGCAATGTTATC+TGG + chr4_4:81626699-81626718 Msa0708130:intron 35.0%
TTCCCTAAGCAATGTTATCT+GGG + chr4_4:81626700-81626719 Msa0708130:intron 35.0%
TTCCCAGATAACATTGCTTA+GGG - chr4_4:81626705-81626724 None:intergenic 35.0%
! ATCCTTCTTTAGAAGAAGAG+AGG + chr4_4:81626834-81626853 Msa0708130:intron 35.0%
! TTCCTCTCTTCTTCTAAAGA+AGG - chr4_4:81626839-81626858 None:intergenic 35.0%
! TCTTTAGAAGAAGAGAGGAA+CGG + chr4_4:81626839-81626858 Msa0708130:intron 35.0%
!! TGGTTATTTTCCCTTTGTGA+AGG + chr4_4:81626865-81626884 Msa0708130:intron 35.0%
CTACAAATGTCCTTCACAAA+GGG - chr4_4:81626878-81626897 None:intergenic 35.0%
ACTACAAATGTCCTTCACAA+AGG - chr4_4:81626879-81626898 None:intergenic 35.0%
GCTTCATTAATATACCAGGT+TGG + chr4_4:81627006-81627025 Msa0708130:CDS 35.0%
!! ATTTCTGATATTTTTGCGGC+AGG - chr4_4:81627084-81627103 None:intergenic 35.0%
! TGTATCTAAAGGTTGACTTC+AGG - chr4_4:81627136-81627155 None:intergenic 35.0%
! TCGCTATTAAGTGTTGTCAA+TGG + chr4_4:81627271-81627290 Msa0708130:CDS 35.0%
!! ATTTTTGTTTGTTTAGCGGG+TGG + chr4_4:81627436-81627455 Msa0708130:intron 35.0%
ATGTTCCGACTCTTCAATAT+AGG + chr4_4:81627944-81627963 Msa0708130:intron 35.0%
CTCATCCTATATTGAAGAGT+CGG - chr4_4:81627952-81627971 None:intergenic 35.0%
CTCTTCAATATAGGATGAGA+AGG + chr4_4:81627953-81627972 Msa0708130:intron 35.0%
TAAGGAGATTGAGGATTCTT+CGG + chr4_4:81628205-81628224 Msa0708130:CDS 35.0%
! TTGTCAATTTAGTTCCCTAC+AGG + chr4_4:81628283-81628302 Msa0708130:CDS 35.0%
TCCAGAAACTGAAATCATTG+TGG + chr4_4:81628383-81628402 Msa0708130:intron 35.0%
CCAGAAACTGAAATCATTGT+GGG + chr4_4:81628384-81628403 Msa0708130:intron 35.0%
TCCCTTTCATATTCTTCTAC+TGG + chr4_4:81628504-81628523 Msa0708130:intron 35.0%
CCCAGTAGAAGAATATGAAA+GGG - chr4_4:81628508-81628527 None:intergenic 35.0%
CCCTTTCATATTCTTCTACT+GGG + chr4_4:81628505-81628524 Msa0708130:intron 35.0%
TCCCAGTAGAAGAATATGAA+AGG - chr4_4:81628509-81628528 None:intergenic 35.0%
CAAAAGGGAGAAAAAAGACA+TGG - chr4_4:81628673-81628692 None:intergenic 35.0%
CAGTCTATTGTAGAAGACAT+AGG + chr4_4:81628797-81628816 Msa0708130:CDS 35.0%
AGACATAGGTGAAAGTGATT+TGG + chr4_4:81628811-81628830 Msa0708130:CDS 35.0%
ATGTACATCTTTCCCTTCTT+TGG - chr4_4:81628852-81628871 None:intergenic 35.0%
CCATAGCCTAATCTCAAAAA+TGG - chr4_4:81628941-81628960 None:intergenic 35.0%
!!! CCATTTTTGAGATTAGGCTA+TGG + chr4_4:81628938-81628957 Msa0708130:intron 35.0%
CATCATTCAGAGTAGAATCA+TGG - chr4_4:81629073-81629092 None:intergenic 35.0%
CCTCATAGACTATGAGATTT+GGG + chr4_4:81629382-81629401 Msa0708130:CDS 35.0%
! CTATGAGATTTGGGTTCAAA+TGG + chr4_4:81629391-81629410 Msa0708130:CDS 35.0%
! ACATCTGAAGGTGATTTTAC+GGG - chr4_4:81629635-81629654 None:intergenic 35.0%
! GACATCTGAAGGTGATTTTA+CGG - chr4_4:81629636-81629655 None:intergenic 35.0%
!! GTCATTAAGTTGATGGACAT+TGG + chr4_4:81629653-81629672 Msa0708130:CDS 35.0%
CAAATGAAGATTACCATGCA+TGG - chr4_4:81629860-81629879 None:intergenic 35.0%
CATGCATGGTAATCTTCATT+TGG + chr4_4:81629858-81629877 Msa0708130:CDS 35.0%
TAGATCGATCTGATGTAACT+GGG + chr4_4:81629905-81629924 Msa0708130:CDS 35.0%
!! CTGTTTCTATATGGTACATG+GGG - chr4_4:81630012-81630031 None:intergenic 35.0%
!! GCTGTTTCTATATGGTACAT+GGG - chr4_4:81630013-81630032 None:intergenic 35.0%
!! TGCTGTTTCTATATGGTACA+TGG - chr4_4:81630014-81630033 None:intergenic 35.0%
!! GTAAGCTTGCTGTTTCTATA+TGG - chr4_4:81630021-81630040 None:intergenic 35.0%
!! TGTCTTTGATTTTACTGCAC+AGG + chr4_4:81630139-81630158 Msa0708130:intron 35.0%
GTCAGAGTACATGAAACAAA+AGG - chr4_4:81630376-81630395 None:intergenic 35.0%
AAAAAGATGAGGAGATTGAG+AGG + chr4_4:81630454-81630473 Msa0708130:CDS 35.0%
!!! AGTTTTAAGCACCTTGTTGA+AGG + chr4_4:81630540-81630559 Msa0708130:CDS 35.0%
GTTTGATATCACCTTCAACA+AGG - chr4_4:81630554-81630573 None:intergenic 35.0%
AGGTGATATCAAACAACGAA+TGG + chr4_4:81630560-81630579 Msa0708130:CDS 35.0%
!!! AGTTTTAAGCACCTTGTTGA+AGG + chr4_4:81630540-81630559 Msa0708130:CDS 35.0%
GTTTGATATCACCTTCAACA+AGG - chr4_4:81630554-81630573 None:intergenic 35.0%
AGGTGATATCAAACAACGAA+TGG + chr4_4:81630560-81630579 Msa0708130:CDS 35.0%
! AACGGAGAAACTCAGTTTTA+TGG - chr4_4:81630815-81630834 None:intergenic 35.0%
!! CGACTTATCTGAAGTCTTTT+TGG - chr4_4:81630979-81630998 None:intergenic 35.0%
ATTATCCAGAACTGTTCAAG+CGG + chr4_4:81631140-81631159 Msa0708130:CDS 35.0%
ATACCTGATGATTTCTTTGG+GGG - chr4_4:81631213-81631232 None:intergenic 35.0%
!! AACTCCTCTAAAGGACTTTT+AGG + chr4_4:81631353-81631372 Msa0708130:intron 35.0%
ATCTCCTAAAAGTCCTTTAG+AGG - chr4_4:81631360-81631379 None:intergenic 35.0%
ACCATAAAAAGCCCTAGTAT+TGG + chr4_4:81631595-81631614 Msa0708130:CDS 35.0%
! TCCAATACTAGGGCTTTTTA+TGG - chr4_4:81631599-81631618 None:intergenic 35.0%
CTTTAGGTGTTCCAATACTA+GGG - chr4_4:81631609-81631628 None:intergenic 35.0%
! CTATTTTATTGCCACCGTTT+TGG - chr4_4:81631634-81631653 None:intergenic 35.0%
CAAAACGGTGGCAATAAAAT+AGG + chr4_4:81631632-81631651 Msa0708130:exon 35.0%
ATTTGAAGATATGTTGGTGC+AGG + chr4_4:81631799-81631818 Msa0708130:three_prime_UTR 35.0%
! TGCACAGAACAATATCGACT+AGG - chr4_4:81625394-81625413 None:intergenic 40.0%
CTTTGGGTGATATGACACAA+AGG + chr4_4:81625528-81625547 Msa0708130:five_prime_UTR 40.0%
CAGATGGGGAATTCATTACT+AGG - chr4_4:81625610-81625629 None:intergenic 40.0%
CTAGTAATGAATTCCCCATC+TGG + chr4_4:81625608-81625627 Msa0708130:exon 40.0%
TGTAGTCTTTATGCCAGATG+GGG - chr4_4:81625624-81625643 None:intergenic 40.0%
CTGTAGTCTTTATGCCAGAT+GGG - chr4_4:81625625-81625644 None:intergenic 40.0%
ACTGTAGTCTTTATGCCAGA+TGG - chr4_4:81625626-81625645 None:intergenic 40.0%
ACTACAGTACCCAGAGAATT+GGG + chr4_4:81625638-81625657 Msa0708130:CDS 40.0%
! AGTCCGAAGGACATTTTCAA+TGG + chr4_4:81625662-81625681 Msa0708130:CDS 40.0%
AGTAAACAGTCAATGTGAGG+TGG + chr4_4:81625706-81625725 Msa0708130:CDS 40.0%
!! ATCGATCAGTTTTGGTCCAA+TGG + chr4_4:81625833-81625852 Msa0708130:CDS 40.0%
!! ACGTTTCTGAAAGCTTTGGA+TGG + chr4_4:81626140-81626159 Msa0708130:CDS 40.0%
!! TCTGAAAGCTTTGGATGGAT+TGG + chr4_4:81626145-81626164 Msa0708130:CDS 40.0%
!! CTGAAAGCTTTGGATGGATT+GGG + chr4_4:81626146-81626165 Msa0708130:CDS 40.0%
CTTATTGCATGCTCCTTGAT+GGG + chr4_4:81626290-81626309 Msa0708130:intron 40.0%
TTTCATTCTTCCCCACCATT+TGG + chr4_4:81626468-81626487 Msa0708130:CDS 40.0%
ACAAGCACATGCAGAAAGAA+GGG - chr4_4:81626594-81626613 None:intergenic 40.0%
AACAAGCACATGCAGAAAGA+AGG - chr4_4:81626595-81626614 None:intergenic 40.0%
!! GCATGTGCTTGTTGTACATA+AGG + chr4_4:81626602-81626621 Msa0708130:intron 40.0%
CTTCCCAGATAACATTGCTT+AGG - chr4_4:81626706-81626725 None:intergenic 40.0%
GACAACACTTAATAGCGACT+GGG - chr4_4:81627269-81627288 None:intergenic 40.0%
TGACAACACTTAATAGCGAC+TGG - chr4_4:81627270-81627289 None:intergenic 40.0%
ACGGAGAAATACCTCATGTA+TGG + chr4_4:81627323-81627342 Msa0708130:intron 40.0%
TCATTTGCAAGCCATACATG+AGG - chr4_4:81627337-81627356 None:intergenic 40.0%
! GTATGGATTACTTGAGCTTG+AGG - chr4_4:81627394-81627413 None:intergenic 40.0%
CTTGTTGAGAAAGGTTTCAC+AGG + chr4_4:81627463-81627482 Msa0708130:CDS 40.0%
! GTTCTGCTTGTGTTGATATG+CGG - chr4_4:81627499-81627518 None:intergenic 40.0%
CAGTGTAAGAAAGTGACATG+AGG - chr4_4:81627590-81627609 None:intergenic 40.0%
!! GTCAAGAATAAGAGTACTCG+AGG + chr4_4:81627655-81627674 Msa0708130:CDS 40.0%
TTACCTTCAACTGTTGAAGC+TGG - chr4_4:81627839-81627858 None:intergenic 40.0%
TAGACACGGGATAATACAAG+AGG + chr4_4:81627902-81627921 Msa0708130:intron 40.0%
! TAGGTTGACGAAAATGCTAG+AGG + chr4_4:81628016-81628035 Msa0708130:CDS 40.0%
TGAAGTGAAATGCTCACAGT+TGG + chr4_4:81628097-81628116 Msa0708130:CDS 40.0%
ACAGTTGGAAGAAGAAACCA+GGG + chr4_4:81628112-81628131 Msa0708130:CDS 40.0%
AGAACTGAGGAATGCAGTTA+AGG + chr4_4:81628187-81628206 Msa0708130:CDS 40.0%
GAATGCAGTTAAGGAGATTG+AGG + chr4_4:81628196-81628215 Msa0708130:CDS 40.0%
CGGATTCAAAATATCAGGAG+TGG + chr4_4:81628225-81628244 Msa0708130:CDS 40.0%
CCCACAATGATTTCAGTTTC+TGG - chr4_4:81628387-81628406 None:intergenic 40.0%
AGGGAAAACCGTTTATGTAG+AGG + chr4_4:81628432-81628451 Msa0708130:CDS 40.0%
!! TTCTGAGATGCATGTATGAG+TGG - chr4_4:81628581-81628600 None:intergenic 40.0%
!! AGGTGAAAGTGATTTGGTTG+TGG + chr4_4:81628817-81628836 Msa0708130:CDS 40.0%
TGGTAAATCCCTCCAAAGAA+GGG + chr4_4:81628837-81628856 Msa0708130:CDS 40.0%
ACATCTTTCCCTTCTTTGGA+GGG - chr4_4:81628848-81628867 None:intergenic 40.0%
TACATCTTTCCCTTCTTTGG+AGG - chr4_4:81628849-81628868 None:intergenic 40.0%
TTCTACTCTGAATGATGCAC+AGG + chr4_4:81629076-81629095 Msa0708130:intron 40.0%
!! TCGAGTACCGATCTTACAAA+AGG - chr4_4:81629124-81629143 None:intergenic 40.0%
TTTGTAAGATCGGTACTCGA+TGG + chr4_4:81629124-81629143 Msa0708130:CDS 40.0%
ATATTCGCTTATGGCCAAAC+CGG + chr4_4:81629160-81629179 Msa0708130:CDS 40.0%
GTCCGGAAAAACTTACACAA+TGG + chr4_4:81629183-81629202 Msa0708130:CDS 40.0%
! ATCACCTTCTTTTCTCAGAC+TGG + chr4_4:81629275-81629294 Msa0708130:intron 40.0%
!! TTTTCTCAGACTGGTCCAAA+TGG + chr4_4:81629284-81629303 Msa0708130:intron 40.0%
! TTCTCACTTGTTGCTCCATT+TGG - chr4_4:81629302-81629321 None:intergenic 40.0%
! TGCTTGTGGAAATTCTGAAG+AGG - chr4_4:81629355-81629374 None:intergenic 40.0%
GCCTCATAGACTATGAGATT+TGG + chr4_4:81629381-81629400 Msa0708130:CDS 40.0%
CCCAAATCTCATAGTCTATG+AGG - chr4_4:81629385-81629404 None:intergenic 40.0%
!! TCGTGACTTGTTATCAACTG+AGG + chr4_4:81629436-81629455 Msa0708130:intron 40.0%
!! TTCCTTGATTTGCACACACT+TGG + chr4_4:81629554-81629573 Msa0708130:CDS 40.0%
!! TCCTTGATTTGCACACACTT+GGG + chr4_4:81629555-81629574 Msa0708130:CDS 40.0%
! CATCTGAAGGTGATTTTACG+GGG - chr4_4:81629634-81629653 None:intergenic 40.0%
TAAACATTACGTGCACAGTG+TGG + chr4_4:81629792-81629811 Msa0708130:intron 40.0%
TGGTCTCAATTCATGTTCGT+GGG + chr4_4:81629812-81629831 Msa0708130:CDS 40.0%
CTTCATTTGGTAGATTTGGC+TGG + chr4_4:81629871-81629890 Msa0708130:CDS 40.0%
GTAGATCGATCTGATGTAAC+TGG + chr4_4:81629904-81629923 Msa0708130:CDS 40.0%
AGATCGATCTGATGTAACTG+GGG + chr4_4:81629906-81629925 Msa0708130:CDS 40.0%
TGTAACTGGGGATAGACTTA+AGG + chr4_4:81629918-81629937 Msa0708130:CDS 40.0%
!! ATGGGGACTCTTTTGAGAAA+GGG - chr4_4:81629995-81630014 None:intergenic 40.0%
!! CTTTGATTTTACTGCACAGG+CGG + chr4_4:81630142-81630161 Msa0708130:intron 40.0%
AACTGACGTCTGAGTTAATC+TGG - chr4_4:81630192-81630211 None:intergenic 40.0%
AGAGTTTCCTCAGTTGAACT+AGG + chr4_4:81630250-81630269 Msa0708130:CDS 40.0%
CAAGGAGACGAGAGAATTAT+TGG + chr4_4:81630288-81630307 Msa0708130:CDS 40.0%
GACGAGAGAATTATTGGAAC+AGG + chr4_4:81630294-81630313 Msa0708130:CDS 40.0%
GTAAATTGAATACGTCGGTG+TGG + chr4_4:81630334-81630353 Msa0708130:intron 40.0%
TCTGCCTTGTCTTACTTTCA+AGG + chr4_4:81630404-81630423 Msa0708130:intron 40.0%
GTCACCTTGAAAGTAAGACA+AGG - chr4_4:81630411-81630430 None:intergenic 40.0%
TTTCTGACAACAAGGAGTCT+CGG + chr4_4:81630679-81630698 Msa0708130:CDS 40.0%
TCTCTTAGAAATACCACCGA+CGG - chr4_4:81630724-81630743 None:intergenic 40.0%
!!! CTTTTTGGCTTCACTCATAC+TGG - chr4_4:81630964-81630983 None:intergenic 40.0%
GTTCAAGCGGTAAGGAAATT+TGG + chr4_4:81631153-81631172 Msa0708130:CDS 40.0%
TTTGCTACAGATGTGGTAGA+TGG - chr4_4:81631186-81631205 None:intergenic 40.0%
ATCTACCACATCTGTAGCAA+AGG + chr4_4:81631185-81631204 Msa0708130:CDS 40.0%
TACCTGATGATTTCTTTGGG+GGG - chr4_4:81631212-81631231 None:intergenic 40.0%
! GCTTTAGGTGTTCCAATACT+AGG - chr4_4:81631610-81631629 None:intergenic 40.0%
GAACACCTAAAGCTCCAAAA+CGG + chr4_4:81631617-81631636 Msa0708130:CDS 40.0%
AACGGTGGCAATAAAATAGG+AGG + chr4_4:81631635-81631654 Msa0708130:exon 40.0%
TGGCACGTGCTATGTAAATA+CGG + chr4_4:81631700-81631719 Msa0708130:three_prime_UTR 40.0%
!! GTCACATTGGTGACATTTTG+TGG + chr4_4:81631967-81631986 Msa0708130:three_prime_UTR 40.0%
! CTTAGGTTGCTTATCCCACT+AGG + chr4_4:81625582-81625601 Msa0708130:five_prime_UTR 45.0%
GACTACAGTACCCAGAGAAT+TGG + chr4_4:81625637-81625656 Msa0708130:CDS 45.0%
TTCGGACTACCCAATTCTCT+GGG - chr4_4:81625650-81625669 None:intergenic 45.0%
AACAGTCAATGTGAGGTGGA+AGG + chr4_4:81625710-81625729 Msa0708130:CDS 45.0%
TCAATGTGAGGTGGAAGGTA+TGG + chr4_4:81625715-81625734 Msa0708130:intron 45.0%
! GTGGAAGGTATGGTGATCAT+TGG + chr4_4:81625725-81625744 Msa0708130:intron 45.0%
! TTAAGAGCATGCTTGAGCAG+TGG + chr4_4:81625910-81625929 Msa0708130:CDS 45.0%
ATTACCATAGTTACGGGACC+AGG - chr4_4:81625970-81625989 None:intergenic 45.0%
GCTTATTGCATGCTCCTTGA+TGG + chr4_4:81626289-81626308 Msa0708130:intron 45.0%
TGTTGTCCACACCAAATGGT+GGG - chr4_4:81626482-81626501 None:intergenic 45.0%
TTCCTGTTGTCCACACCAAA+TGG - chr4_4:81626486-81626505 None:intergenic 45.0%
GGAAGCTTACATCTGAGTCA+AGG + chr4_4:81626502-81626521 Msa0708130:CDS 45.0%
!! GAGTTTTAGCCCTTCTATGG+CGG + chr4_4:81626539-81626558 Msa0708130:CDS 45.0%
!! AGTTTTAGCCCTTCTATGGC+GGG + chr4_4:81626540-81626559 Msa0708130:CDS 45.0%
CAAGCACATGCAGAAAGAAG+GGG - chr4_4:81626593-81626612 None:intergenic 45.0%
GGAAGATCTGAATAGCTTCC+AGG - chr4_4:81627063-81627082 None:intergenic 45.0%
ACACTTAATAGCGACTGGGT+GGG - chr4_4:81627265-81627284 None:intergenic 45.0%
AACACTTAATAGCGACTGGG+TGG - chr4_4:81627266-81627285 None:intergenic 45.0%
!! GAAAGCGTCGAGAGAAGAAA+CGG + chr4_4:81627304-81627323 Msa0708130:CDS 45.0%
TGAGGTGCAAGTCATTCACA+TGG - chr4_4:81627376-81627395 None:intergenic 45.0%
TGGAACTAGAGAAGAGAGTG+AGG + chr4_4:81627688-81627707 Msa0708130:CDS 45.0%
TAGCCAGCTTCAACAGTTGA+AGG + chr4_4:81627833-81627852 Msa0708130:CDS 45.0%
ATAGGATGAGAAGGTCACAG+AGG + chr4_4:81627962-81627981 Msa0708130:intron 45.0%
GGTCACAGAGGAAGAAAAGA+AGG + chr4_4:81627974-81627993 Msa0708130:CDS 45.0%
CACAGTTGGAAGAAGAAACC+AGG + chr4_4:81628111-81628130 Msa0708130:CDS 45.0%
CAATTCTGCTTTAGCATCCC+TGG - chr4_4:81628132-81628151 None:intergenic 45.0%
!! AGTATCGACTCGAAGAACTG+AGG + chr4_4:81628174-81628193 Msa0708130:CDS 45.0%
GTGGTAAATCCCTCCAAAGA+AGG + chr4_4:81628836-81628855 Msa0708130:CDS 45.0%
! ATAAACCTTGAGTTGCGGCA+GGG - chr4_4:81628904-81628923 None:intergenic 45.0%
! AATAAACCTTGAGTTGCGGC+AGG - chr4_4:81628905-81628924 None:intergenic 45.0%
TATTCGCTTATGGCCAAACC+GGG + chr4_4:81629161-81629180 Msa0708130:CDS 45.0%
! TGTGTAAGTTTTTCCGGACC+CGG - chr4_4:81629182-81629201 None:intergenic 45.0%
TGGACCAGTCTGAGAAAAGA+AGG - chr4_4:81629282-81629301 None:intergenic 45.0%
GGAGCAACAAGTGAGAAACT+CGG + chr4_4:81629305-81629324 Msa0708130:CDS 45.0%
TCCCAAGTGTGTGCAAATCA+AGG - chr4_4:81629559-81629578 None:intergenic 45.0%
AAAGAAGTAGCCGTTCTCAC+AGG + chr4_4:81629714-81629733 Msa0708130:CDS 45.0%
GTGGTCTCAATTCATGTTCG+TGG + chr4_4:81629811-81629830 Msa0708130:CDS 45.0%
CTCAATTCATGTTCGTGGGA+AGG + chr4_4:81629816-81629835 Msa0708130:CDS 45.0%
!! AAGTCTGGTTCTACCATGCA+TGG + chr4_4:81629844-81629863 Msa0708130:CDS 45.0%
AACAAATCGCTTTCTGCCCT+CGG + chr4_4:81629955-81629974 Msa0708130:CDS 45.0%
GGCAAAGATTACATCTCCGA+GGG - chr4_4:81629974-81629993 None:intergenic 45.0%
!! CATGGGGACTCTTTTGAGAA+AGG - chr4_4:81629996-81630015 None:intergenic 45.0%
CAACTTCTGCAAACGTCTCT+TGG + chr4_4:81630042-81630061 Msa0708130:CDS 45.0%
AGGAGCTGCACGAAATAACA+AGG + chr4_4:81630270-81630289 Msa0708130:CDS 45.0%
AATACGTCGGTGTGGTTATG+CGG + chr4_4:81630342-81630361 Msa0708130:intron 45.0%
CTTAGAAATACCACTGACGG+AGG - chr4_4:81630496-81630515 None:intergenic 45.0%
GTTTCTCCATTCGCCTGAAA+AGG + chr4_4:81630599-81630618 Msa0708130:CDS 45.0%
GTTTCTCCGTTCACCTGAAA+AGG + chr4_4:81630824-81630843 Msa0708130:CDS 45.0%
CAGATGTGGTAGATGGCATT+CGG - chr4_4:81631179-81631198 None:intergenic 45.0%
AATAGCATGACCTCTGAGCA+AGG - chr4_4:81631282-81631301 None:intergenic 45.0%
!! CTCGGCAATCGATTTGAGAT+CGG - chr4_4:81631842-81631861 None:intergenic 45.0%
! GTGGATTTTGCACAACTTGC+AGG - chr4_4:81632080-81632099 None:intergenic 45.0%
CTTCGGACTACCCAATTCTC+TGG - chr4_4:81625651-81625670 None:intergenic 50.0%
CAGAGAATTGGGTAGTCCGA+AGG + chr4_4:81625649-81625668 Msa0708130:CDS 50.0%
!! TGGATGGATTGGGATTGCCA+AGG + chr4_4:81626156-81626175 Msa0708130:CDS 50.0%
GGGATCTATGAAGCCTGTTG+TGG + chr4_4:81626338-81626357 Msa0708130:intron 50.0%
TCGAAGATCCATACCCACGA+GGG - chr4_4:81626446-81626465 None:intergenic 50.0%
! TTCTTCCCCACCATTTGGTG+TGG + chr4_4:81626473-81626492 Msa0708130:CDS 50.0%
GTTGTCCACACCAAATGGTG+GGG - chr4_4:81626481-81626500 None:intergenic 50.0%
CTGTTGTCCACACCAAATGG+TGG - chr4_4:81626483-81626502 None:intergenic 50.0%
!! CACCATTTGGTGTGGACAAC+AGG + chr4_4:81626481-81626500 Msa0708130:CDS 50.0%
GAAGAAGAGAGGAACGGAAG+TGG + chr4_4:81626845-81626864 Msa0708130:intron 50.0%
CGTGGAACTTATGACCAACC+TGG - chr4_4:81627023-81627042 None:intergenic 50.0%
! GGTTGGTCATAAGTTCCACG+AGG + chr4_4:81627023-81627042 Msa0708130:CDS 50.0%
!! TGGGAGCATTCTGCAACAAC+AGG - chr4_4:81627246-81627265 None:intergenic 50.0%
! GGTGGCATGCTTGTTGAGAA+AGG + chr4_4:81627454-81627473 Msa0708130:CDS 50.0%
! AAGTTTTTCCGGACCCGGTT+TGG - chr4_4:81629177-81629196 None:intergenic 50.0%
! CGTGGGAAGGATTTCAAGTC+TGG + chr4_4:81629829-81629848 Msa0708130:CDS 50.0%
GGGCAAAGATTACATCTCCG+AGG - chr4_4:81629975-81629994 None:intergenic 50.0%
TGCAGCTCCTAGTTCAACTG+AGG - chr4_4:81630260-81630279 None:intergenic 50.0%
TCCATTCGCCTGAAAAGGCT+AGG + chr4_4:81630604-81630623 Msa0708130:CDS 50.0%
!! GTTACTCGCCTAGCCTTTTC+AGG - chr4_4:81630615-81630634 None:intergenic 50.0%
AAGGCTAGGCGAGTAACTCA+AGG + chr4_4:81630618-81630637 Msa0708130:CDS 50.0%
TCCGTTCACCTGAAAAGGCT+AGG + chr4_4:81630829-81630848 Msa0708130:CDS 50.0%
!!! GCCTAGCCTTTTCAGGTGAA+CGG - chr4_4:81630833-81630852 None:intergenic 50.0%
!! GTTACTCGCCTAGCCTTTTC+AGG - chr4_4:81630615-81630634 None:intergenic 50.0%
AAGGCTAGGCGAGTAACTCA+AGG + chr4_4:81630618-81630637 Msa0708130:CDS 50.0%
GCTCTCAGCACAGAAACTGA+TGG + chr4_4:81630924-81630943 Msa0708130:CDS 50.0%
CCTTACCGCTTGAACAGTTC+TGG - chr4_4:81631148-81631167 None:intergenic 50.0%
CCAGAACTGTTCAAGCGGTA+AGG + chr4_4:81631145-81631164 Msa0708130:CDS 50.0%
GACCCCCCAAAGAAATCATC+AGG + chr4_4:81631207-81631226 Msa0708130:CDS 50.0%
TGTCTGTCATCCTTGCTCAG+AGG + chr4_4:81631269-81631288 Msa0708130:intron 50.0%
CACCTAAAGCTCCAAAACGG+TGG + chr4_4:81631620-81631639 Msa0708130:CDS 50.0%
!!! TGCCACCGTTTTGGAGCTTT+AGG - chr4_4:81631625-81631644 None:intergenic 50.0%
ACGACCTGGTCCCGTAACTA+TGG + chr4_4:81625963-81625982 Msa0708130:CDS 55.0%
GAGACAGTGGCAACCCATCA+AGG - chr4_4:81626306-81626325 None:intergenic 55.0%
TCCAATGCATCAAGCCCTCG+TGG + chr4_4:81626429-81626448 Msa0708130:CDS 55.0%
CCAATGCATCAAGCCCTCGT+GGG + chr4_4:81626430-81626449 Msa0708130:CDS 55.0%
CTCGAAGATCCATACCCACG+AGG - chr4_4:81626447-81626466 None:intergenic 55.0%
! GTACTCGAGGCACTTGCATC+TGG + chr4_4:81627668-81627687 Msa0708130:CDS 55.0%
ACGGGGAACATGCTAGCATC+TGG - chr4_4:81629617-81629636 None:intergenic 55.0%
!! GCCTAGCCTTTTCAGGCGAA+TGG - chr4_4:81630608-81630627 None:intergenic 55.0%
AAATCACTGAGCGCGTCCGT+CGG + chr4_4:81630705-81630724 Msa0708130:CDS 55.0%
GGGGTCCTTTGCTACAGATG+TGG - chr4_4:81631193-81631212 None:intergenic 55.0%
TCCACACAGCAACTGCGAGA+CGG + chr4_4:81631731-81631750 Msa0708130:three_prime_UTR 55.0%
CCCACGAGGGCTTGATGCAT+TGG - chr4_4:81626433-81626452 None:intergenic 60.0%
GCATCAAGCCCTCGTGGGTA+TGG + chr4_4:81626435-81626454 Msa0708130:CDS 60.0%
!! TAGCCCTTCTATGGCGGGTC+CGG + chr4_4:81626545-81626564 Msa0708130:CDS 60.0%
TCACCGGACCCGCCATAGAA+GGG - chr4_4:81626551-81626570 None:intergenic 60.0%
TTCACCGGACCCGCCATAGA+AGG - chr4_4:81626552-81626571 None:intergenic 60.0%
GCTTATGGCCAAACCGGGTC+CGG + chr4_4:81629166-81629185 Msa0708130:CDS 60.0%
TCACTGAACGCCTCCGTCAG+TGG + chr4_4:81630483-81630502 Msa0708130:CDS 60.0%
TCCGTCTCGCAGTTGCTGTG+TGG - chr4_4:81631735-81631754 None:intergenic 60.0%
TTCGGCCCTGCCGCAACTCA+AGG + chr4_4:81628896-81628915 Msa0708130:CDS 65.0%
TCACTGAGCGCGTCCGTCGG+TGG + chr4_4:81630708-81630727 Msa0708130:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 81625375 81632132 81625375 ID=Msa0708130;Name=Msa0708130
chr4_4 mRNA 81625375 81632132 81625375 ID=Msa0708130-mRNA-1;Parent=Msa0708130;Name=Msa0708130-mRNA-1;_AED=0.10;_eAED=0.10;_QI=239|0.80|0.68|0.95|0.90|0.95|22|484|1117
chr4_4 exon 81625375 81625731 81625375 ID=Msa0708130-mRNA-1:exon:26753;Parent=Msa0708130-mRNA-1
chr4_4 exon 81625827 81625984 81625827 ID=Msa0708130-mRNA-1:exon:26754;Parent=Msa0708130-mRNA-1
chr4_4 exon 81626092 81626202 81626092 ID=Msa0708130-mRNA-1:exon:26755;Parent=Msa0708130-mRNA-1
chr4_4 exon 81626339 81626566 81626339 ID=Msa0708130-mRNA-1:exon:26756;Parent=Msa0708130-mRNA-1
chr4_4 exon 81626709 81626724 81626709 ID=Msa0708130-mRNA-1:exon:26757;Parent=Msa0708130-mRNA-1
chr4_4 exon 81626998 81627125 81626998 ID=Msa0708130-mRNA-1:exon:26758;Parent=Msa0708130-mRNA-1
chr4_4 exon 81627256 81627339 81627256 ID=Msa0708130-mRNA-1:exon:26759;Parent=Msa0708130-mRNA-1
chr4_4 exon 81627452 81627529 81627452 ID=Msa0708130-mRNA-1:exon:26760;Parent=Msa0708130-mRNA-1
chr4_4 exon 81627617 81627709 81627617 ID=Msa0708130-mRNA-1:exon:26761;Parent=Msa0708130-mRNA-1
chr4_4 exon 81627807 81627854 81627807 ID=Msa0708130-mRNA-1:exon:26762;Parent=Msa0708130-mRNA-1
chr4_4 exon 81627966 81628304 81627966 ID=Msa0708130-mRNA-1:exon:26763;Parent=Msa0708130-mRNA-1
chr4_4 exon 81628388 81628469 81628388 ID=Msa0708130-mRNA-1:exon:26764;Parent=Msa0708130-mRNA-1
chr4_4 exon 81628564 81628659 81628564 ID=Msa0708130-mRNA-1:exon:26765;Parent=Msa0708130-mRNA-1
chr4_4 exon 81628741 81628917 81628741 ID=Msa0708130-mRNA-1:exon:26766;Parent=Msa0708130-mRNA-1
chr4_4 exon 81629098 81629204 81629098 ID=Msa0708130-mRNA-1:exon:26767;Parent=Msa0708130-mRNA-1
chr4_4 exon 81629293 81629444 81629293 ID=Msa0708130-mRNA-1:exon:26768;Parent=Msa0708130-mRNA-1
chr4_4 exon 81629538 81629735 81629538 ID=Msa0708130-mRNA-1:exon:26769;Parent=Msa0708130-mRNA-1
chr4_4 exon 81629810 81630063 81629810 ID=Msa0708130-mRNA-1:exon:26770;Parent=Msa0708130-mRNA-1
chr4_4 exon 81630161 81630315 81630161 ID=Msa0708130-mRNA-1:exon:26771;Parent=Msa0708130-mRNA-1
chr4_4 exon 81630426 81631003 81630426 ID=Msa0708130-mRNA-1:exon:26772;Parent=Msa0708130-mRNA-1
chr4_4 exon 81631131 81631228 81631131 ID=Msa0708130-mRNA-1:exon:26773;Parent=Msa0708130-mRNA-1
chr4_4 exon 81631593 81632132 81631593 ID=Msa0708130-mRNA-1:exon:26774;Parent=Msa0708130-mRNA-1
chr4_4 five_prime_UTR 81625375 81625613 81625375 ID=Msa0708130-mRNA-1:five_prime_utr;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81625614 81625731 81625614 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81625827 81625984 81625827 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81626092 81626202 81626092 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81626339 81626566 81626339 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81626709 81626724 81626709 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81626998 81627125 81626998 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81627256 81627339 81627256 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81627452 81627529 81627452 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81627617 81627709 81627617 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81627807 81627854 81627807 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81627966 81628304 81627966 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81628388 81628469 81628388 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81628564 81628659 81628564 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81628741 81628917 81628741 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81629098 81629204 81629098 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81629293 81629444 81629293 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81629538 81629735 81629538 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81629810 81630063 81629810 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81630161 81630315 81630161 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81630426 81631003 81630426 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81631131 81631228 81631131 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 CDS 81631593 81631648 81631593 ID=Msa0708130-mRNA-1:cds;Parent=Msa0708130-mRNA-1
chr4_4 three_prime_UTR 81631649 81632132 81631649 ID=Msa0708130-mRNA-1:three_prime_utr;Parent=Msa0708130-mRNA-1
Gene Sequence

>Msa0708130

ATGAATTCCCCATCTGGCATAAAGACTACAGTACCCAGAGAATTGGGTAGTCCGAAGGACATTTTCAATGGAATTGATAGAATTGGGAATGTAGTAAACAGTCAATGTGAGGTGGAAGCTAAACATCGATCAGTTTTGGTCCAATGGTTAAATAGTCTTCTTCCTTCATTGGACTTCTCAACAAATGTCACAGATGGTGAGTTAAGAGCATGCTTGAGCAGTGGTACAGTTTTGTGCCAGATACTAAACAAACTACGACCTGGTCCCGTAACTATGGTCAGTGAATCTGATCATTCTCTGCCATCACAATCAGAAAATGTTAAAACGTTTCTGAAAGCTTTGGATGGATTGGGATTGCCAAGGTTTGAAATATCAGACCTAGAGAAGGGATCTATGAAGCCTGTTGTGGATTGTCTTTTAATACTCAGAGCGAAAAGTTTGATGAATTCTTTGGGAGATAATGCTTCTTTAAGTAATTCCAATGCATCAAGCCCTCGTGGGTATGGATCTTCGAGTTTTCATTCTTCCCCACCATTTGGTGTGGACAACAGGAAGCTTACATCTGAGTCAAGGTTTCAACGTGTTATGAGTTTTAGCCCTTCTATGGCGGGTCCGCAATGTTATCTGGGAAAACCATCAGCTTCATTAATATACCAGGTTGGTCATAAGTTCCACGAGGTTTTTCAAATTAAACCTGGAAGCTATTCAGATCTTCCTGCCGCAAAAATATCAGAAATGATGAAATCAAACAGTTTAGATAATGCTCCCACCCAGTCGCTATTAAGTGTTGTCAATGGTATTCTTGAAGAAAGCGTCGAGAGAAGAAACGGAGAAATACCTCATCGGGTGGCATGCTTGTTGAGAAAGGTTTCACAGGAGATCGAACGCCGCATATCAACACAAGCAGAACACATACGAACTCAAAGTAATCTTTTTAAGGCTCGGGAAGAAAAATATCAGTCAAGAATAAGAGTACTCGAGGCACTTGCATCTGGAACTAGAGAAGAGAGTGAGAGCGAACTTTTGCAACAGATGATTTCTAGCCAGCTTCAACAGTTGAAGGATGAGAAGGTCACAGAGGAAGAAAAGAAGGAAAACGAAAAAGAAATAATTAGGTTGACGAAAATGCTAGAGGACAAAAATTTGGAAATTTCAGAATTGAAGCAAAAACTGGAAGCAACCAAAAAAACATATGAAGTGAAATGCTCACAGTTGGAAGAAGAAACCAGGGATGCTAAAGCAGAATTGAGACAGAAATCTCAAGAATATGAGTATCGACTCGAAGAACTGAGGAATGCAGTTAAGGAGATTGAGGATTCTTCGGATTCAAAATATCAGGAGTGGAGCGTGAAAGAGAACCAATTGCAGACTGTTATAAATTGTCAATTTAGTTCCCTACAGAAACTGAAATCATTGTGGGAGTCCATTAAGCAAGATGCTATGAAAGGGAAAACCGTTTATGTAGAGGAGTGTAATCGATTACGTGTAAATCTCAAACCACTCATACATGCATCTCAGAACTATCAAGCCGTCCTTGCTGAAAATAAAAAAATGTTTAATGAAGTTCAAGAATTAAAAGGAAATATCAGAGTATTTTGTCGAATTAGACCATTCCTTATAGACAAAAAGGAAAAACAGTCTATTGTAGAAGACATAGGTGAAAGTGATTTGGTTGTGGTAAATCCCTCCAAAGAAGGGAAAGATGTACATCGATCATTTAAATTCAACAAGATTTTCGGCCCTGCCGCAACTCAAGGAGATGTATACGCTGACATTCAACCTTTTGTAAGATCGGTACTCGATGGATATAATGTATGTATATTCGCTTATGGCCAAACCGGGTCCGGAAAAACTTACACAATGACTGGTCCAAATGGAGCAACAAGTGAGAAACTCGGTGTTAATTATCGAGCTTTAAATGACCTCTTCAGAATTTCCACAAGCAGAGGAAGCCTCATAGACTATGAGATTTGGGTTCAAATGGTTGAGATATATAACGAGCAAGTTCGTGACTTCTTTTTCTTCTCTGGTTTCCTTGATTTGCACACACTTGGGATTTTGACTCAATCTCAATCATACGGTATAGCAGTACCAGATGCTAGCATGTTCCCCGTAAAATCACCTTCAGATGTCATTAAGTTGATGGACATTGGACTTAAAAATAGAGCAATCGGTTCAACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTCTCAATTCATGTTCGTGGGAAGGATTTCAAGTCTGGTTCTACCATGCATGGTAATCTTCATTTGGTAGATTTGGCTGGAAGTGAAAGAGTAGATCGATCTGATGTAACTGGGGATAGACTTAAGGAAGCACAACATATAAACAAATCGCTTTCTGCCCTCGGAGATGTAATCTTTGCCCTTTCTCAAAAGAGTCCCCATGTACCATATAGAAACAGCAAGCTTACTCAACTTCTGCAAACGTCTCTTGGCGGTCAAGCAAAGACTCTCATGTTTGTCCAGATTAACTCAGACGTCAGTTCGTATTCTGAAACTTTGAGTACTTTAAAGTTTGCTGAGAGAGTTTCCTCAGTTGAACTAGGAGCTGCACGAAATAACAAGGAGACGAGAGAATTATTGGAACAGGTGACTTCTATGAAGAACACTATTTTGAAAAAAGATGAGGAGATTGAGAGGCTTAAATCACTGAACGCCTCCGTCAGTGGTATTTCTAAGAAAATTCAAAAAGTATCAAGTGGAAGTTTTAAGCACCTTGTTGAAGGTGATATCAAACAACGAATGGATGACCATAAAACTGAGTTTCTCCATTCGCCTGAAAAGGCTAGGCGAGTAACTCAAGGAGTCTCAGCTACAGATTTTCAACAAAGATCAAGTGATTTTTCTGACAACAAGGAGTCTCGGCTTAAATCACTGAGCGCGTCCGTCGGTGGTATTTCTAAGAGAATTCAAAAAGTATCAAGTGGAAGTTTTAAGCACCTTGTTGAAGGTGATATCAAACAACGAATGGATGACCATAAAACTGAGTTTCTCCGTTCACCTGAAAAGGCTAGGCGAGTAACTCAAGGAGTCTCAGCTACAGATTTTCAACAAAGATCAAGTGATTTTTCTGACAACAATAGTCTTGCTCTCAGCACAGAAACTGATGGTTCTTCTGATAGTTCCAGTATGAGTGAAGCCAAAAAGACTTCAGATAAGTCGAAGAAGTCTAAAGTATTATCCAGAACTGTTCAAGCGGTAAGGAAATTTGGCCGAATGCCATCTACCACATCTGTAGCAAAGGACCCCCCAAAGAAATCATCAGGTACCATAAAAAGCCCTAGTATTGGAACACCTAAAGCTCCAAAACGGTGGCAATAA
Protein sequence

>Msa0708130

MNSPSGIKTTVPRELGSPKDIFNGIDRIGNVVNSQCEVEAKHRSVLVQWLNSLLPSLDFSTNVTDGELRACLSSGTVLCQILNKLRPGPVTMVSESDHSLPSQSENVKTFLKALDGLGLPRFEISDLEKGSMKPVVDCLLILRAKSLMNSLGDNASLSNSNASSPRGYGSSSFHSSPPFGVDNRKLTSESRFQRVMSFSPSMAGPQCYLGKPSASLIYQVGHKFHEVFQIKPGSYSDLPAAKISEMMKSNSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVSQEIERRISTQAEHIRTQSNLFKAREEKYQSRIRVLEALASGTREESESELLQQMISSQLQQLKDEKVTEEEKKENEKEIIRLTKMLEDKNLEISELKQKLEATKKTYEVKCSQLEEETRDAKAELRQKSQEYEYRLEELRNAVKEIEDSSDSKYQEWSVKENQLQTVINCQFSSLQKLKSLWESIKQDAMKGKTVYVEECNRLRVNLKPLIHASQNYQAVLAENKKMFNEVQELKGNIRVFCRIRPFLIDKKEKQSIVEDIGESDLVVVNPSKEGKDVHRSFKFNKIFGPAATQGDVYADIQPFVRSVLDGYNVCIFAYGQTGSGKTYTMTGPNGATSEKLGVNYRALNDLFRISTSRGSLIDYEIWVQMVEIYNEQVRDFFFFSGFLDLHTLGILTQSQSYGIAVPDASMFPVKSPSDVIKLMDIGLKNRAIGSTAMNERSSRSHSVVSIHVRGKDFKSGSTMHGNLHLVDLAGSERVDRSDVTGDRLKEAQHINKSLSALGDVIFALSQKSPHVPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETLSTLKFAERVSSVELGAARNNKETRELLEQVTSMKNTILKKDEEIERLKSLNASVSGISKKIQKVSSGSFKHLVEGDIKQRMDDHKTEFLHSPEKARRVTQGVSATDFQQRSSDFSDNKESRLKSLSASVGGISKRIQKVSSGSFKHLVEGDIKQRMDDHKTEFLRSPEKARRVTQGVSATDFQQRSSDFSDNNSLALSTETDGSSDSSSMSEAKKTSDKSKKSKVLSRTVQAVRKFGRMPSTTSVAKDPPKKSSGTIKSPSIGTPKAPKRWQ*